BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125479.3 - phase: 0
(68 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SN83 Hypothetical protein F1P2.100 [Arabidopsis thal... 46 3e-04
UniRef100_Q6F2D3 Putative zinc finger protein [Solanum demissum] 43 0.002
UniRef100_Q6NKQ5 At2g01275 [Arabidopsis thaliana] 42 0.003
UniRef100_Q5ZEM3 Hypothetical protein P0684C01.8 [Oryza sativa] 42 0.004
UniRef100_Q6Z542 Zinc finger protein-like [Oryza sativa] 40 0.015
UniRef100_Q69JV9 Zinc finger (C3HC4-type RING finger)-like prote... 40 0.015
UniRef100_Q9FJJ6 Arabidopsis thaliana genomic DNA, chromosome 5,... 39 0.026
UniRef100_O80611 Hypothetical protein At2g02960 [Arabidopsis tha... 39 0.026
UniRef100_Q6L4F7 Hypothetical protein P0560C03.19 [Oryza sativa] 38 0.076
UniRef100_Q9FWY0 T14P4.10 protein [Arabidopsis thaliana] 37 0.17
UniRef100_Q9M9T6 F14L17.2 protein [Arabidopsis thaliana] 36 0.22
UniRef100_Q8LFI8 Nucleoside triphosphatase, putative [Arabidopsi... 36 0.22
UniRef100_Q8GXP5 Hypothetical protein [Arabidopsis thaliana] 36 0.22
UniRef100_Q657H7 Zinc finger protein-like [Oryza sativa] 36 0.29
UniRef100_Q9LS14 Similarity to unknown protein [Arabidopsis thal... 35 0.38
UniRef100_Q8S9X5 P0519D04.8 protein [Oryza sativa] 35 0.64
UniRef100_Q9XF50 PIT1 [Arabidopsis thaliana] 34 0.84
UniRef100_Q8S0K0 B1078G07.35 protein [Oryza sativa] 34 1.1
UniRef100_Q5W6Y9 Hypothetical protein OSJNBa0036C12.8 [Oryza sat... 34 1.1
UniRef100_Q940I3 Hypothetical protein At3g57070; F24I3.150 [Arab... 31 7.1
>UniRef100_Q9SN83 Hypothetical protein F1P2.100 [Arabidopsis thaliana]
Length = 288
Score = 45.8 bits (107), Expect = 3e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 8 TVHQVEIPIEELSAALREQLVIGKMGECRYCHEEEWIYRLEAPCRCDGSLK 58
+V++ E+P E + A E+ ++ + ECR C EE+ LEAPC C+GSLK
Sbjct: 43 SVNETEVPREYYAVADEEEPLLQSV-ECRICQEEDSTKNLEAPCACNGSLK 92
>UniRef100_Q6F2D3 Putative zinc finger protein [Solanum demissum]
Length = 284
Score = 42.7 bits (99), Expect = 0.002
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 7 ITVHQVEIPIEELSAALREQLVIGKMGECRYCHEEEWIYRLEAPCRCDGSLK 58
I V + ++ EE E +IG+ ECR C EE+ + +LE+PC C GSLK
Sbjct: 35 IAVDEKKVLEEEEEEGNEEVPLIGR-AECRICQEEDSLDKLESPCACSGSLK 85
>UniRef100_Q6NKQ5 At2g01275 [Arabidopsis thaliana]
Length = 259
Score = 42.4 bits (98), Expect = 0.003
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 11 QVEIPIEE---LSAALREQLVIG--KMGECRYCHEEEWIYRLEAPCRCDGSLK 58
Q IP+EE L E L G M ECR CH+E+ +E PC C GS+K
Sbjct: 30 QANIPVEECTILDDKTLEMLRNGDLSMAECRICHDEDLDSNMETPCSCSGSVK 82
>UniRef100_Q5ZEM3 Hypothetical protein P0684C01.8 [Oryza sativa]
Length = 218
Score = 42.0 bits (97), Expect = 0.004
Identities = 17/27 (62%), Positives = 19/27 (69%)
Query: 32 MGECRYCHEEEWIYRLEAPCRCDGSLK 58
M ECR C EE+W +EAPC C GSLK
Sbjct: 1 MVECRICQEEDWDTSMEAPCACCGSLK 27
>UniRef100_Q6Z542 Zinc finger protein-like [Oryza sativa]
Length = 276
Score = 40.0 bits (92), Expect = 0.015
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 8 TVHQVEIPIEELSAALREQLVIGKMGECRYCHEEEWIYRLEAPCRCDGSLK 58
T H + + + E A E L+ + ECR C EE+ I LE+PC C GSLK
Sbjct: 37 TTHTL-LSVRESMGAEEEPLI--QTVECRICQEEDNISNLESPCACTGSLK 84
>UniRef100_Q69JV9 Zinc finger (C3HC4-type RING finger)-like protein [Oryza sativa]
Length = 250
Score = 40.0 bits (92), Expect = 0.015
Identities = 22/56 (39%), Positives = 28/56 (49%), Gaps = 1/56 (1%)
Query: 3 MGDEITVHQVEIPIEELSAALREQLVIGKMGECRYCHEEEWIYRLEAPCRCDGSLK 58
MGD + V + + +IG M ECR C EE+ LE+PC C GSLK
Sbjct: 1 MGDHVAVDVGGLMASRGAGEEETGALIG-MVECRICQEEDLAKNLESPCACSGSLK 55
>UniRef100_Q9FJJ6 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1
[Arabidopsis thaliana]
Length = 307
Score = 39.3 bits (90), Expect = 0.026
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 34 ECRYCHEEEWIYRLEAPCRCDGSLK 58
ECR C EE+ + LE+PC C GSLK
Sbjct: 77 ECRICQEEDSVKNLESPCSCSGSLK 101
>UniRef100_O80611 Hypothetical protein At2g02960 [Arabidopsis thaliana]
Length = 271
Score = 39.3 bits (90), Expect = 0.026
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 25 EQLVIGKMGECRYCHEEEWIYRLEAPCRCDGSLK 58
E L++ GECR C +E + LE+PC C GSLK
Sbjct: 35 EPLIVS--GECRICSDESPVENLESPCACSGSLK 66
>UniRef100_Q6L4F7 Hypothetical protein P0560C03.19 [Oryza sativa]
Length = 252
Score = 37.7 bits (86), Expect = 0.076
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 4 GDEITVHQVEIPIEELSAALREQLVI--------------GKMGECRYCHEEEWIYRLEA 49
G +T V+ I+E SAA VI G + ECR C EE+ +E
Sbjct: 10 GRLLTESTVQSAIDEASAAAMPSSVIASEHNDVQDEREKSGVLVECRICQEEDDQTYMET 69
Query: 50 PCRCDGSLK 58
PC C GSLK
Sbjct: 70 PCSCRGSLK 78
>UniRef100_Q9FWY0 T14P4.10 protein [Arabidopsis thaliana]
Length = 214
Score = 36.6 bits (83), Expect = 0.17
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 25 EQLVIGKMGECRYCHEEEWIYRLEAPCRCDGSLK 58
E + CR CHEEE EAPC C G++K
Sbjct: 10 ETYLKSSFNRCRICHEEEAESYFEAPCSCSGTIK 43
>UniRef100_Q9M9T6 F14L17.2 protein [Arabidopsis thaliana]
Length = 274
Score = 36.2 bits (82), Expect = 0.22
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 34 ECRYCHEEEWIYRLEAPCRCDGSLK 58
ECR C +E I LE+PC C+GSLK
Sbjct: 56 ECRICQDECDIKNLESPCACNGSLK 80
>UniRef100_Q8LFI8 Nucleoside triphosphatase, putative [Arabidopsis thaliana]
Length = 265
Score = 36.2 bits (82), Expect = 0.22
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 34 ECRYCHEEEWIYRLEAPCRCDGSLK 58
ECR C +E I LE+PC C+GSLK
Sbjct: 56 ECRICQDECDIKNLESPCACNGSLK 80
>UniRef100_Q8GXP5 Hypothetical protein [Arabidopsis thaliana]
Length = 265
Score = 36.2 bits (82), Expect = 0.22
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 34 ECRYCHEEEWIYRLEAPCRCDGSLK 58
ECR C +E I LE+PC C+GSLK
Sbjct: 56 ECRICQDECDIKNLESPCACNGSLK 80
>UniRef100_Q657H7 Zinc finger protein-like [Oryza sativa]
Length = 220
Score = 35.8 bits (81), Expect = 0.29
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 32 MGECRYCHEEE--WIYRLEAPCRCDGSLK 58
M +CR CHEEE +E+PC C GSLK
Sbjct: 12 MRQCRICHEEEEEGCTAMESPCGCSGSLK 40
>UniRef100_Q9LS14 Similarity to unknown protein [Arabidopsis thaliana]
Length = 259
Score = 35.4 bits (80), Expect = 0.38
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 17 EELSAALREQLVIGKMGECRYCHEEEWIYRLEAPCRCDGSLK 58
E +SA L K +CR CH+E+ ++ PC C G+LK
Sbjct: 38 ESISAGA--DLCESKFVQCRICHDEDEDTNMDTPCSCSGTLK 77
>UniRef100_Q8S9X5 P0519D04.8 protein [Oryza sativa]
Length = 108
Score = 34.7 bits (78), Expect = 0.64
Identities = 21/59 (35%), Positives = 29/59 (48%), Gaps = 5/59 (8%)
Query: 5 DEITVHQVEIPIEELSAALREQLVIGK-----MGECRYCHEEEWIYRLEAPCRCDGSLK 58
+ + V V+I ++ + E + GK M ECR C EE +E PC C GSLK
Sbjct: 24 EALAVASVKIVHDQPDLPVHEDVQDGKAKSGVMVECRICQEEGDESYMETPCCCKGSLK 82
>UniRef100_Q9XF50 PIT1 [Arabidopsis thaliana]
Length = 218
Score = 34.3 bits (77), Expect = 0.84
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 31 KMGECRYCHEEEWIYRLEAPCRCDGSLK 58
++ CR CHEEE E PC C G++K
Sbjct: 16 RITRCRICHEEEEESFFEVPCACSGTVK 43
>UniRef100_Q8S0K0 B1078G07.35 protein [Oryza sativa]
Length = 195
Score = 33.9 bits (76), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 32 MGECRYCHEEEWIYRLEAPCRCDGSLKVF 60
M ECR C EE +++PC C G+LKV+
Sbjct: 39 MIECRICQEEGDEGAMDSPCACTGTLKVY 67
>UniRef100_Q5W6Y9 Hypothetical protein OSJNBa0036C12.8 [Oryza sativa]
Length = 213
Score = 33.9 bits (76), Expect = 1.1
Identities = 14/23 (60%), Positives = 16/23 (68%), Gaps = 2/23 (8%)
Query: 38 CHEEE--WIYRLEAPCRCDGSLK 58
CHEEE W +E+PC C GSLK
Sbjct: 9 CHEEEDEWCAAIESPCGCSGSLK 31
>UniRef100_Q940I3 Hypothetical protein At3g57070; F24I3.150 [Arabidopsis thaliana]
Length = 302
Score = 31.2 bits (69), Expect = 7.1
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 18 ELSAALREQLVIGKMGECRYCHEEEWIYRLEAPC-RCDGSLKVFQ 61
EL+ L++ ++G CR C + ++ PC CDGS KVF+
Sbjct: 238 ELAEMLKDFPACERLGTCRSCGDARFV-----PCTNCDGSTKVFE 277
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.324 0.140 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,394,256
Number of Sequences: 2790947
Number of extensions: 3586614
Number of successful extensions: 8695
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8674
Number of HSP's gapped (non-prelim): 21
length of query: 68
length of database: 848,049,833
effective HSP length: 44
effective length of query: 24
effective length of database: 725,248,165
effective search space: 17405955960
effective search space used: 17405955960
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 68 (30.8 bits)
Medicago: description of AC125479.3