BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC123975.11 - phase: 0
(206 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit [... 323 2e-87
UniRef100_Q5VQW7 Putative DNA-directed RNA polymerase II 23K cha... 291 6e-78
UniRef100_Q7XUF8 OJ991113_30.8 protein [Oryza sativa] 276 2e-73
UniRef100_Q9N5K2 DNA-directed RNA polymerases II 24 kDa polypept... 228 1e-58
UniRef100_Q61CV6 Hypothetical protein CBG12745 [Caenorhabditis b... 226 4e-58
UniRef100_UPI00003C0CAC UPI00003C0CAC UniRef100 entry 225 5e-58
UniRef100_UPI0000318DEB UPI0000318DEB UniRef100 entry 225 6e-58
UniRef100_Q6DEG5 Zgc:101098 protein [Brachydanio rerio] 224 1e-57
UniRef100_Q7PJW8 ENSANGP00000006082 [Anopheles gambiae str. PEST] 223 2e-57
UniRef100_Q6PA38 MGC68604 protein [Xenopus laevis] 223 3e-57
UniRef100_Q80UW8 DNA-directed RNA polymerase II 23 kDa polypepti... 223 3e-57
UniRef100_P19388 DNA-directed RNA polymerase II 23 kDa polypepti... 222 4e-57
UniRef100_Q5R587 Hypothetical protein DKFZp459G0627 [Pongo pygma... 221 9e-57
UniRef100_Q9V5S0 CG11979-PA [Drosophila melanogaster] 220 2e-56
UniRef100_UPI00003ACA4F UPI00003ACA4F UniRef100 entry 198 6e-50
UniRef100_UPI000041A6CF UPI000041A6CF UniRef100 entry 196 4e-49
UniRef100_UPI000036204B UPI000036204B UniRef100 entry 196 4e-49
UniRef100_UPI000042E358 UPI000042E358 UniRef100 entry 190 2e-47
UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-l... 189 3e-47
UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative [Plasmo... 188 7e-47
>UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana]
Length = 205
Score = 323 bits (828), Expect = 2e-87
Identities = 157/205 (76%), Positives = 182/205 (88%)
Query: 2 VFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKK 61
+ +EEE+ RLYRI+KT+MQML+DR Y + D EL M+K F K+G+NMKREDLV K K+
Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60
Query: 62 DKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKF 121
+ SDQ+Y+FFP+EAKVGVKTMK YTNRM SENV+RAILV Q +LTPFA+TC+SEI+SKF
Sbjct: 61 NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKF 120
Query: 122 HLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
HLEVFQEAE+LVNIKEHVLVPEHQ+L EKKTLLERYTVKETQLPRIQVTDP+ARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180
Query: 182 KRGQVVKIIRPSETAGRYVTYRFVV 206
KRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205
>UniRef100_Q5VQW7 Putative DNA-directed RNA polymerase II 23K chain [Oryza sativa]
Length = 210
Score = 291 bits (746), Expect = 6e-78
Identities = 143/206 (69%), Positives = 171/206 (82%)
Query: 1 MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTK 60
+V E + RL RIR+TVMQML+DR YLV + EL M + DF KYGE+ REDL+INK K
Sbjct: 5 LVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYK 64
Query: 61 KDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASK 120
K+ PSDQIYVFFP + KVG+K +K Y M +ENV RA+LV Q +LTPFA++ + E+ K
Sbjct: 65 KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPK 124
Query: 121 FHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
HLE+FQEAELL+NIKEHVLVPEHQ+LN+ EKKTLLERYT+KETQLPRIQ+TDP+ARYYG
Sbjct: 125 IHLEIFQEAELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYG 184
Query: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206
L+RGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 185 LRRGQVVKIIRPSETAGRYVTYRYVV 210
>UniRef100_Q7XUF8 OJ991113_30.8 protein [Oryza sativa]
Length = 205
Score = 276 bits (706), Expect = 2e-73
Identities = 131/203 (64%), Positives = 170/203 (83%)
Query: 4 SEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDK 63
SEEE +RL+RIR+TVMQML+DR YLV + ++++ + DF ++G+ + R+ LV ++ KKD
Sbjct: 3 SEEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDN 62
Query: 64 PSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHL 123
+DQIYVFFP++AK GVKT+++Y RM E+V+ ILV Q +L+ FA++ V E++ KFHL
Sbjct: 63 GADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAVQEVSQKFHL 122
Query: 124 EVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
EVFQEAELLVNIK+H LVPEH++L +KKTLLERYTVKETQLPRIQ+TDP+ARYYG+KR
Sbjct: 123 EVFQEAELLVNIKDHTLVPEHELLTPEQKKTLLERYTVKETQLPRIQITDPIARYYGMKR 182
Query: 184 GQVVKIIRPSETAGRYVTYRFVV 206
GQVVKIIR SETAGRYVTYR+VV
Sbjct: 183 GQVVKIIRASETAGRYVTYRYVV 205
>UniRef100_Q9N5K2 DNA-directed RNA polymerases II 24 kDa polypeptide [Caenorhabditis
elegans]
Length = 211
Score = 228 bits (580), Expect = 1e-58
Identities = 117/211 (55%), Positives = 148/211 (69%), Gaps = 5/211 (2%)
Query: 1 MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMK-----REDLV 55
M E E RL+RIRKTV+QM+ DR YLV EL+ FK +YG+ R DL
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLT 60
Query: 56 INKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVS 115
I D P+DQ++VFFPE+AK+G+KT+K +M +N+ RAI+V QT +TP AK +
Sbjct: 61 ILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIG 120
Query: 116 EIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPV 175
++A K+ LE F EAEL+VNI EH LVPEH ++ EK LL RY +K++QLPRIQ DPV
Sbjct: 121 DMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKLKDSQLPRIQQCDPV 180
Query: 176 ARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
ARY+GL+RGQVVKIIRPSETAGRY+TYR VV
Sbjct: 181 ARYFGLRRGQVVKIIRPSETAGRYITYRLVV 211
>UniRef100_Q61CV6 Hypothetical protein CBG12745 [Caenorhabditis briggsae]
Length = 211
Score = 226 bits (575), Expect = 4e-58
Identities = 115/211 (54%), Positives = 147/211 (69%), Gaps = 5/211 (2%)
Query: 1 MVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMK-----REDLV 55
M E E RL+RIRKTV+QM+ DR YLV EL+ FK+ +G+ R DL
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLT 60
Query: 56 INKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVS 115
I D P+DQ++VFFPE+ K+G+KT+K +M +N+ RAI+V QT +TP AK +
Sbjct: 61 ILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIG 120
Query: 116 EIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPV 175
++A K+ LE F EAEL+VNI EH LVPEH ++ EK LL RY +K++QLPRIQ DPV
Sbjct: 121 DMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKLKDSQLPRIQQCDPV 180
Query: 176 ARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
ARY+GL+RGQVVKIIRPSETAGRY+TYR VV
Sbjct: 181 ARYFGLRRGQVVKIIRPSETAGRYITYRLVV 211
>UniRef100_UPI00003C0CAC UPI00003C0CAC UniRef100 entry
Length = 210
Score = 225 bits (574), Expect = 5e-58
Identities = 113/206 (54%), Positives = 147/206 (70%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMK-----REDLVINKT 59
E E +L+RIRKTVMQ+ DR YLV EL+ + FK+++G+ R DL++
Sbjct: 4 EAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFP+E K+G+KT+KTY RM E ++RAI+V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F E+ELL+NI EH LVPEH +L EK+ LL RY +KE QL RIQ DPVARY+
Sbjct: 124 KYILEQFLESELLINITEHELVPEHIVLTPDEKEELLTRYKLKENQLMRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
GLKRGQVVKIIRPSETAGRY++YR V
Sbjct: 184 GLKRGQVVKIIRPSETAGRYISYRLV 209
>UniRef100_UPI0000318DEB UPI0000318DEB UniRef100 entry
Length = 210
Score = 225 bits (573), Expect = 6e-58
Identities = 114/206 (55%), Positives = 146/206 (70%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKT 59
EEE RL++IRKT+MQ+ DR YLV EL+ + +FK ++G+ +R DL +
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFPEE KVG+KT+K Y RM EN+ RAI+V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F + ELL+NI EH LVPEH ++ E LL RY +KE+QLPRIQ DPVARY+
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
GLKRGQVVKIIRPSETAGRY+TYR V
Sbjct: 184 GLKRGQVVKIIRPSETAGRYITYRLV 209
>UniRef100_Q6DEG5 Zgc:101098 protein [Brachydanio rerio]
Length = 210
Score = 224 bits (571), Expect = 1e-57
Identities = 113/206 (54%), Positives = 146/206 (70%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKT 59
EEE RL++IRKT+MQ+ DR YLV EL+ + +F+ ++G+ +R DL +
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFRSQFGDKPSEGRPRRNDLTVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFPEE KVG+KT+K Y RM EN+ RAI+V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F + ELL+NI EH LVPEH ++ E LL RY +KE+QLPRIQ DPVARY+
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
GLKRGQVVKIIRPSETAGRY+TYR V
Sbjct: 184 GLKRGQVVKIIRPSETAGRYITYRLV 209
>UniRef100_Q7PJW8 ENSANGP00000006082 [Anopheles gambiae str. PEST]
Length = 210
Score = 223 bits (569), Expect = 2e-57
Identities = 111/206 (53%), Positives = 147/206 (70%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMK-----REDLVINKT 59
+ E +L+RIRKTVMQ+ DR YLV EL+ + FK+++G+ R DL++
Sbjct: 4 DAETYKLWRIRKTVMQLSHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFP+E K+G+KT+KTY RM EN++RAI+V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPDEPKIGIKTIKTYCTRMQEENIHRAIVVVQAGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F E+ELL+NI EH LVPEH ++ EK+ LL RY +KE L RIQ DPVARY+
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTPEEKQELLARYKLKENMLMRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
GLKRGQVVKIIRPSETAGRY++YR V
Sbjct: 184 GLKRGQVVKIIRPSETAGRYISYRLV 209
>UniRef100_Q6PA38 MGC68604 protein [Xenopus laevis]
Length = 210
Score = 223 bits (567), Expect = 3e-57
Identities = 112/206 (54%), Positives = 146/206 (70%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKT 59
EEE RL++IRKT+MQ+ DR YLV EL+ + +FK ++G+ +R DL +
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFPEE KVG+KT+K Y RM EN+ RA++V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F + ELL+NI EH LVPEH ++ E LL RY ++E+QLPRIQ DPVARY+
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKDEVTELLARYKLRESQLPRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
GLKRGQVVKIIRPSETAGRY+TYR V
Sbjct: 184 GLKRGQVVKIIRPSETAGRYITYRLV 209
>UniRef100_Q80UW8 DNA-directed RNA polymerase II 23 kDa polypeptide [Mus musculus]
Length = 210
Score = 223 bits (567), Expect = 3e-57
Identities = 111/206 (53%), Positives = 146/206 (69%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKT 59
EEE RL++IRKT+MQ+ DR YLV EL+ + +FK ++G+ +R DL +
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFPEE KVG+KT+K Y RM EN+ RA++V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F + ELL+NI EH LVPEH ++ E LL RY ++E+QLPRIQ DPVARY+
Sbjct: 124 KYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 184 GIKRGQVVKIIRPSETAGRYITYRLV 209
>UniRef100_P19388 DNA-directed RNA polymerase II 23 kDa polypeptide [Homo sapiens]
Length = 210
Score = 222 bits (566), Expect = 4e-57
Identities = 111/206 (53%), Positives = 145/206 (69%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKT 59
EEE RL++IRKT+MQ+ DR YLV EL+ + +FK ++G+ +R DL +
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFPEE KVG+KT+K Y RM EN+ RA++V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F + ELL+NI EH LVPEH ++ E LL RY ++E QLPRIQ DPVARY+
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 184 GIKRGQVVKIIRPSETAGRYITYRLV 209
>UniRef100_Q5R587 Hypothetical protein DKFZp459G0627 [Pongo pygmaeus]
Length = 210
Score = 221 bits (563), Expect = 9e-57
Identities = 110/206 (53%), Positives = 145/206 (69%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKT 59
EEE RL++IRKT+MQ+ DR YLV EL+ + +F+ ++G+ +R DL +
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFPEE KVG+KT+K Y RM EN+ RA++V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F + ELL+NI EH LVPEH ++ E LL RY ++E QLPRIQ DPVARY+
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
G+KRGQVVKIIRPSETAGRY+TYR V
Sbjct: 184 GIKRGQVVKIIRPSETAGRYITYRLV 209
>UniRef100_Q9V5S0 CG11979-PA [Drosophila melanogaster]
Length = 210
Score = 220 bits (561), Expect = 2e-56
Identities = 111/206 (53%), Positives = 145/206 (69%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMK-----REDLVINKT 59
E E +L+RIRKT+MQ+ DR YLV EL+ + FK+ +G+ R DL++
Sbjct: 4 EAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+DQ++VFFPEE K+G+KT+KTY RM EN++RAI+V Q +TP AK + ++A
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F E+ELL+NI EH LVPEH ++ EK+ LL RY +KE L RIQ DPVARY+
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLMRIQAGDPVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
GLKRGQVVKIIR SETAGRY++YR V
Sbjct: 184 GLKRGQVVKIIRSSETAGRYISYRLV 209
>UniRef100_UPI00003ACA4F UPI00003ACA4F UniRef100 entry
Length = 191
Score = 198 bits (504), Expect = 6e-50
Identities = 101/191 (52%), Positives = 133/191 (68%), Gaps = 6/191 (3%)
Query: 20 QMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKTKKDKPSDQIYVFFPE 74
Q+ DR YLV EL+ ++ +FK ++G+ +R DL + D P+DQ++VFFPE
Sbjct: 1 QLCHDRGYLVTQDELDQTE-EFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPE 59
Query: 75 EAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHLEVFQEAELLVN 134
E KVG+KT+K Y RM EN+ RA++V Q +TP AK + ++A K+ LE F + ELL+N
Sbjct: 60 EPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLIN 119
Query: 135 IKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSE 194
I EH LVPEH ++ E LL RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSE
Sbjct: 120 ITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSE 179
Query: 195 TAGRYVTYRFV 205
TAGRY+TYR V
Sbjct: 180 TAGRYITYRLV 190
>UniRef100_UPI000041A6CF UPI000041A6CF UniRef100 entry
Length = 210
Score = 196 bits (497), Expect = 4e-49
Identities = 98/206 (47%), Positives = 138/206 (66%), Gaps = 5/206 (2%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGEN-----MKREDLVINKT 59
+EE+ +L++IRKT+MQ+ DR YLV ELN + +FK + G+ +R DL
Sbjct: 4 KEEMYQLWKIRKTIMQLCHDRGYLVTXDELNQTLKEFKVQSGDKPSEGQRRRTDLTALVA 63
Query: 60 KKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIAS 119
D P+D+++VFFPEE KVG+KT+ Y RM EN+ R +++ Q +TP AK C+ +A
Sbjct: 64 HNDDPTDKMFVFFPEEPKVGIKTLNVYCRRMQQENITRVLIMVQQGMTPSAKXCLVHMAP 123
Query: 120 KFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYY 179
K+ LE F + +LL++I E+ LVPE+ ++ E LL Y ++E QLPRIQ D VARY+
Sbjct: 124 KYILEQFLQQKLLIDITEYELVPEYVVMTKEEVTVLLALYKLRENQLPRIQAGDAVARYF 183
Query: 180 GLKRGQVVKIIRPSETAGRYVTYRFV 205
G+K GQVVKIIRPSE AGRY+TYR +
Sbjct: 184 GIKHGQVVKIIRPSEMAGRYLTYRLM 209
>UniRef100_UPI000036204B UPI000036204B UniRef100 entry
Length = 199
Score = 196 bits (497), Expect = 4e-49
Identities = 103/198 (52%), Positives = 132/198 (66%), Gaps = 14/198 (7%)
Query: 20 QMLKDRNYLVGDFELNMSKHDFKDKYGENM-----KREDLVINKTKKDKPSDQIYVFFP- 73
Q+ DR YLV EL+ + +FK ++G+ +R DL + D P+DQ++VFFP
Sbjct: 1 QLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPG 60
Query: 74 --------EEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHLEV 125
EE KVG+KT+K Y RM EN+ RAI+V Q +TP AK + ++A K+ LE
Sbjct: 61 LSLLLTFAEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVDMAPKYILEQ 120
Query: 126 FQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ 185
F + ELL+NI EH LVPEH ++ E LL RY +KE+QLPRIQ DPVARY+GLKRGQ
Sbjct: 121 FLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVARYFGLKRGQ 180
Query: 186 VVKIIRPSETAGRYVTYR 203
VVKIIRPSETAGRY+TYR
Sbjct: 181 VVKIIRPSETAGRYITYR 198
>UniRef100_UPI000042E358 UPI000042E358 UniRef100 entry
Length = 221
Score = 190 bits (483), Expect = 2e-47
Identities = 91/214 (42%), Positives = 142/214 (65%), Gaps = 14/214 (6%)
Query: 4 SEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYG--------------ENM 49
+ E+ RL+R+ +TV +M++DR YL+ D+E+N+S +FKD++G ++
Sbjct: 5 ANRELARLWRVSRTVHEMVRDRGYLLADYEINVSFEEFKDRHGATGSVEWMKCPQADKSS 64
Query: 50 KREDLVINKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPF 109
R ++ + ++ +D+I+V+F + V +MKT+ M+ R I++ ++P
Sbjct: 65 SRSNMSFDAIHENDNTDKIFVYFCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPA 124
Query: 110 AKTCVSEIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRI 169
AK + E+ S++HLE F E++LLVNI +H LVP+H ++ EK L++RY +KETQLPRI
Sbjct: 125 AKKTLQEMQSEYHLEDFPESDLLVNITKHFLVPKHTVMKPEEKSALIKRYRLKETQLPRI 184
Query: 170 QVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYR 203
+TDPVA+YYGLKRGQV+KI R SETAGRY+TYR
Sbjct: 185 MITDPVAKYYGLKRGQVMKIERASETAGRYITYR 218
>UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-like protein
[Arabidopsis thaliana]
Length = 210
Score = 189 bits (481), Expect = 3e-47
Identities = 97/206 (47%), Positives = 141/206 (68%), Gaps = 4/206 (1%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKR---EDLVINKTKK 61
++EITR++++R+TV+QML+DR Y + + +LN+ + +F ++ + M + E L ++ K
Sbjct: 5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKG 64
Query: 62 DKPSDQIYVFFPEEAKVGVKTMKTYTN-RMNSENVYRAILVCQTSLTPFAKTCVSEIASK 120
P+D+IYVF+PE KVGV +K +M + V+R I+V ++T A+ VSE+
Sbjct: 65 PNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKM 124
Query: 121 FHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
+EVF+EAEL+ NI EH LV ++ +L+D KK LL YTV++TQLPRI VTDP+ARYYG
Sbjct: 125 LTIEVFEEAELVTNITEHKLVNKYYVLDDQAKKKLLNTYTVQDTQLPRILVTDPLARYYG 184
Query: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206
LKRGQVVKI R T+ Y TYRF V
Sbjct: 185 LKRGQVVKIRRSDATSLDYYTYRFAV 210
>UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative [Plasmodium falciparum]
Length = 205
Score = 188 bits (478), Expect = 7e-47
Identities = 100/204 (49%), Positives = 136/204 (66%), Gaps = 2/204 (0%)
Query: 5 EEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGEN-MKREDLVINKTKKDK 63
E+ +TR Y+ RKT +ML+DR Y++ E + FK+ + +N +R + I+ T K+
Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIMTPREKLENFSTFKEMFEDNDRQRSKMGISTTHKND 61
Query: 64 PSDQIYVFFPEEAK-VGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFH 122
+++I V+F +E K GVK ++ T RM +++ RAILV Q LTPFA+ + E A +
Sbjct: 62 SNNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAIKEAAPRHI 121
Query: 123 LEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLK 182
+E F + ELLVNI +H LVP H L EKK LL+RY + E +LPRIQ DPV RY+GL
Sbjct: 122 IENFLDTELLVNITKHELVPRHIPLTSDEKKNLLQRYKIMENKLPRIQDVDPVCRYFGLS 181
Query: 183 RGQVVKIIRPSETAGRYVTYRFVV 206
+GQVVKIIRPSETAGRYVTYR VV
Sbjct: 182 KGQVVKIIRPSETAGRYVTYRLVV 205
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.135 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 324,538,372
Number of Sequences: 2790947
Number of extensions: 13064282
Number of successful extensions: 38309
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 38107
Number of HSP's gapped (non-prelim): 175
length of query: 206
length of database: 848,049,833
effective HSP length: 121
effective length of query: 85
effective length of database: 510,345,246
effective search space: 43379345910
effective search space used: 43379345910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)
Medicago: description of AC123975.11