BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC122728.10 + phase: 0 
         (2239 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]                 2343  0.0
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]                 1654  0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ...   903  0.0
UniRef100_Q6L974 GAG-POL [Vitis vinifera]                             762  0.0
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]                      754  0.0
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa...   753  0.0
UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]                  696  0.0
UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]               695  0.0
UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]                  693  0.0
UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]                      692  0.0
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]               690  0.0
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]              690  0.0
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]          689  0.0
UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]                      687  0.0
UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]                 687  0.0
UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]               686  0.0
UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa]                      686  0.0
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]                  684  0.0
UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]               679  0.0
UniRef100_Q93Y89 Gag-pol [Oryza sativa]                               676  0.0

>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
          Length = 2262

 Score = 2343 bits (6071), Expect = 0.0
 Identities = 1229/2316 (53%), Positives = 1577/2316 (68%), Gaps = 139/2316 (6%)

Query: 7    QLRTELASLREELAKAHDAMTALLAAQEQPVPVVSTAANVTPTVTTDPRSIMPSGYPYGL 66
            Q++TELA +R  +A+    M  +   QE+   +V     VTP     P   +P G P   
Sbjct: 3    QVQTELAEMRANMAQFMHMMQGVAQGQEELRALVQRQEAVTPP----PNQALPEGNP--- 55

Query: 67   PLYYTANTGAGTSGTTNNGPIPGANLTPVSTALTQA-ATTVTEPIVNAVP-------LFV 118
             ++ T       +       + G  +     A   A A  +  P  N +P       LF 
Sbjct: 56   -VHDTPAAAIPVNNYAVGEELMGIRVDGQPIAPDAANARVIHAPARNRIPIVDRQEDLFT 114

Query: 119  HANAHHGSIATTGNMEERMEELAKELRREIKANRGNGDSIKTQDLCLVSKVDVPKKFKVP 178
              +            + +++ LA+++R     N    D     ++ LV  + +P KFK P
Sbjct: 115  MFSEDEDIPGRNDARDRKVDALAEKIRAMECQNSLGFD---VTNMGLVEGLRIPYKFKAP 171

Query: 179  EFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLMEDAAEWYTSLSKDDVHTFD 238
             FDKYNG +CP+ H+  Y RK+  Y D++ + +++FQDSL   + +WY  L  D +  + 
Sbjct: 172  SFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKSDSIRCWR 231

Query: 239  ELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQT 298
            +L  AF   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ P + E E+T  
Sbjct: 232  DLGEAFLRQYKHNMDMAPSRTQLQSLCQKSNESFKEYAQRWRELAARVQPPMLERELTDM 291

Query: 299  FLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVNASKRYGNGHH 358
            F+ TL+  +++RM      +FS++V  G R E  ++ G I     +   ++SK+   G  
Sbjct: 292  FIGTLQGVFMDRMGSCPFGSFSDVVICGERTESLIKTGKI----QDVGSSSSKKPFAGAP 347

Query: 359  KKKETEVGMVSAGAGQSMATVAPINATQMPPSYPYMPYSQHPFFPPFYHQYPLPPGQPQV 418
            +++E E   V     Q+        A  +P   P     Q    P               
Sbjct: 348  RRREGETNAVQHRRDQNRIEYRQAAAVTIPAPQPRQQQQQRVQQP--------------- 392

Query: 419  PVNAIAQQMKQQMPVQQQQQNQQARPTFPPIPMLYAELLPTLLQRGH---CTTRQGKPPP 475
                  QQ +QQ P Q +Q+    R  F  +PM YAELLP LL+ G    CT      PP
Sbjct: 393  ------QQQQQQRPYQPRQRMPDRR--FDSLPMSYAELLPELLRLGLVELCTMA----PP 440

Query: 476  DPLPPRFRSDLKCDFHQGALGHDVEGCYALKYIVKKLIDQGKLTFENNVPHVLDNPLPNH 535
              LPP + ++++CDFH GA GH  E C AL++ V+ LID   + F   VP+V++NP+P H
Sbjct: 441  TVLPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDANAINFAP-VPNVVNNPMPQH 499

Query: 536  A--TVNMIEVCEEAPRLD-VRNVATPLVPLHIKLRKASLFNHDHAKCLGCLRDPLGCYTV 592
                VN IE  E    +D V +V T L+ +  +L    +++     CLGC     GC  +
Sbjct: 500  GGHRVNNIEGKEAEDLVDNVDDVQTSLLVVKSRLLNEGVYSGCDEDCLGCAESENGCDQL 559

Query: 593  QEDIQSLMNDNLLTVS-------DVCVIVPVF-----HDPPVKSTPLKKNAEPLVIRLP- 639
            +  IQ +M++  L  S        V  I   F     H   V S P   N  P+ I +P 
Sbjct: 560  RAGIQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGHGQRVVSAPAT-NGTPVTIPVPV 618

Query: 640  -----------GPIPYVSDKAVPYKY-----------------NATMIENGV--EVPLAS 669
                       G     + +AVP+KY                 N T +  G+   VP   
Sbjct: 619  TISAPTTIVASGRRAVENSRAVPWKYDNAYRSNRRVESQTKPVNQTPVTIGLANRVPATV 678

Query: 670  FATVSNIAEGTSAALRSGKVRPPLFQKKVATPIIPPVEEATPTVVSPIATDVSQPGKSIE 729
               V N+  G     RSG++  P   +      +   +     VV         P  S E
Sbjct: 679  GPAVDNVG-GPGGFTRSGRLFAPQPLRDNNAEALAKAK-GKQAVVEEEPVQKEAPEGSFE 736

Query: 730  DSNLDEILRIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVLEQAYVDHEVTV 789
              +++E +++IK+SDYKIVDQL QTPSKIS+LSLLL SEAHRN LLK+L  AYV  E++V
Sbjct: 737  -KDVEEFMKMIKKSDYKIVDQLNQTPSKISILSLLLCSEAHRNALLKMLNLAYVPQEISV 795

Query: 790  DRFGGIVGNITACNNLWFSEEELPEVGKSHNLALHISLNCKSDMISNVLVDTGSSLNVMP 849
            ++  G++ N++  + + F+  +LP  G++HN ALHI++ CK  ++S+VLVDTGSSLNV+P
Sbjct: 796  NQLEGVMANVSTRHGVGFTNLDLPPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLP 855

Query: 850  KTTLDQLSYRGTPLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYS 909
            K  L ++   G  L  S  +V+AFD S+++V GE+ LP+ IGPE F + F VMDI  +YS
Sbjct: 856  KQILKKIDVEGFVLTPSDLIVRAFDRSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYS 915

Query: 910  CLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCVEA-GSAEGT- 967
            CLLGRPWIH AGAV+STLHQKLK+V NG++VT+ GEE  LVS LSSF  VE  G    T 
Sbjct: 916  CLLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEEILVSHLSSFKYVEVDGEIHETL 975

Query: 968  --AFQGLTIES---AESKEAGAAMASLKDAQRAIQEGQTAGWGKMIQLCENKRKEGLGFS 1022
               F+ + +E    AE ++ G ++ S K A+  +  G+  GWGKM+ L   + K G+G+ 
Sbjct: 976  CQVFETVALEKVAYAEQRKPGVSITSYKQAKEVVDSGKAEGWGKMVDLPVKEDKFGVGYE 1035

Query: 1023 PSSRVSSG-----VFHSAGFVNAISEEATGSG-----------LRPAFVTPGGIATNWDA 1066
            P     +G      F SAG +N     ATGS            +RP    PGG   NW A
Sbjct: 1036 PLQAEQNGQAGPSTFTSAGLMNHGDVSATGSEDCDSDCDLDNWVRPC--APGGSINNWTA 1093

Query: 1067 IDIPSIMHVSELNHNKPVEHSNPTVPPSFDFPVYEAEDEEGDN--IPYEITRLLEQEKKA 1124
             ++  +  ++E +      + +      FD P+Y+AE+E  ++  +P E+ RLL+QE++ 
Sbjct: 1094 EEVVQVTLLTESDLMAFTMNGSVIAQYDFDNPIYQAEEESEEDCELPAELVRLLKQEERV 1153

Query: 1125 IQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPM 1184
            IQPHQEE+E++N+GTE+  REIKIGA LE+ VK+++I++LREY +IFAWSY+DMPGLD  
Sbjct: 1154 IQPHQEELEVVNLGTEDATREIKIGAALEDSVKRRLIEMLREYVEIFAWSYQDMPGLDTD 1213

Query: 1185 IVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPK 1244
            IV HR+P +  CP V+QKLRRT PDMA KIK EVQKQ DAGFL    YP W+ANIVPVPK
Sbjct: 1214 IVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVTSYPPWMANIVPVPK 1273

Query: 1245 KDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDR 1304
            KDGKVRMCVD+RDLN+ASPKD+FPLPHIDVLVDNTAQS VFSFMDGFSGYNQIKM+PED 
Sbjct: 1274 KDGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSGYNQIKMAPEDM 1333

Query: 1305 EKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQ 1364
            EKT+FITPWGTFCYKVMPFGL NAGATYQR MTTLFHDM+HKE+EVYVDDMI KS  EE+
Sbjct: 1334 EKTTFITPWGTFCYKVMPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAKSQTEEE 1393

Query: 1365 HVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQ 1424
            H+  L K+F+RLRK+KLRLNPNKCTFGVRSGKLLGFIVS+KGIEVDP KV+AI+EMP P+
Sbjct: 1394 HLVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQEMPEPK 1453

Query: 1425 TEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPP 1484
            TEKQVRGFLGRLNYI+RFISH+TATC PIFKLLRKNQ I WND+CQ+AFD IK YL +PP
Sbjct: 1454 TEKQVRGFLGRLNYIARFISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKEYLQKPP 1513

Query: 1485 ILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTC 1544
            IL+PPV GRPLIMYL+V + SMGCVLG+ DE+G+KEHAIYYLSKKFTDCETRY++LEKTC
Sbjct: 1514 ILIPPVPGRPLIMYLSVTENSMGCVLGRHDESGRKEHAIYYLSKKFTDCETRYSLLEKTC 1573

Query: 1545 CALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKA 1604
            CALAWAA+RLR Y++NHTT LIS+MDP+KYIFEK A+TG++ARWQM+L+EYDI + +QKA
Sbjct: 1574 CALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQYTSQKA 1633

Query: 1605 IKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGA 1664
            IKGSIL+D+LA QP++DYQ + F+FPDE+IMYLK KDC+EPL+ EGPDP+ KW L+FDGA
Sbjct: 1634 IKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKMKDCKEPLVEEGPDPDDKWTLMFDGA 1693

Query: 1665 VNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGD 1724
            VN  G G+GAV+++P+G H+PF+AR+ F+ TNN AEYEACI GIEEAID+RIK LDI+GD
Sbjct: 1694 VNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIFGD 1753

Query: 1725 SALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFR 1784
            SALV+NQ+ G+W T+   LIPY DY RR+LT+F KV+L+H+PRDENQMADALATLSSM +
Sbjct: 1754 SALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVKLYHVPRDENQMADALATLSSMIK 1813

Query: 1785 VNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGYRPWYYDIKQFLLSREYPPGASK 1844
            VN WN VP +   RLERP++VFA   V       V+  +PWYYDIK FL ++EYP GASK
Sbjct: 1814 VNWWNHVPHVAVNRLERPAYVFAAESV-------VIDEKPWYYDIKNFLKTQEYPEGASK 1866

Query: 1845 QDKKTLRRLAGRFLLD-GDILYKRNYDMVLLRCVDEHEAEQLVHDVHDGTFGTHATGHTM 1903
             DKKTLRRLAG F L+  D+LYKRN+DMVLLRC+D  EA+ L+ +VH+G+FGTHA GH M
Sbjct: 1867 NDKKTLRRLAGSFYLNQDDVLYKRNFDMVLLRCMDRPEADMLMQEVHEGSFGTHAGGHAM 1926

Query: 1904 SRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIG 1963
            ++KLLRAGYYWM ME DC++YARKCHKCQIYAD++HVPP  LNVM+SPWPF+MWGIDMIG
Sbjct: 1927 AKKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHVPPSPLNVMNSPWPFAMWGIDMIG 1986

Query: 1964 RIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNG 2023
            +IEP ASNGHRFILVAIDYFTKWVEAASY N+TKQVV +FIK  IICRYGVP +IITDNG
Sbjct: 1987 KIEPTASNGHRFILVAIDYFTKWVEAASYANITKQVVTRFIKKEIICRYGVPERIITDNG 2046

Query: 2024 TNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKDWHEMLPY 2083
            +NLNN +++ LC++FKIEHHNSSPYRP+MNGAVEAANKNIK+IV+KMV TYKDWHEMLP+
Sbjct: 2047 SNLNNKMMKELCKDFKIEHHNSSPYRPKMNGAVEAANKNIKKIVRKMVVTYKDWHEMLPF 2106

Query: 2084 ALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNL 2143
            ALHGYRT+VR+STGATP+SLVYGMEAVLP+EVEIPSLRV+++ KL EAEW ++R+++L+L
Sbjct: 2107 ALHGYRTSVRTSTGATPYSLVYGMEAVLPVEVEIPSLRVLLDVKLDEAEWIRTRFNELSL 2166

Query: 2144 IEEKRMDAMARGHSYQARMKAAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGP 2203
            IEE+R+  +  G  YQ RMK AFD+KV PR +++G+LVLKR +    D RGKWTPNYEGP
Sbjct: 2167 IEERRLAVVCHGQLYQRRMKRAFDQKVRPRSYQIGDLVLKRILPPGTDNRGKWTPNYEGP 2226

Query: 2204 YVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2239
            YVVKK FSGGAL+LT MDG + P+PVN+D+VKKYFA
Sbjct: 2227 YVVKKVFSGGALMLTTMDGEDFPSPVNSDVVKKYFA 2262


>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
          Length = 1814

 Score = 1654 bits (4283), Expect = 0.0
 Identities = 910/1857 (49%), Positives = 1194/1857 (64%), Gaps = 127/1857 (6%)

Query: 7    QLRTELASLREELAKAHDAMTALLAAQEQPVPVVSTAANVTPTVTTDPRSIMPSGYPYG- 65
            Q++ ELA ++  +A+  + M  +   QE+   +V       P V   P    P G P   
Sbjct: 3    QVQAELAEMKANMAQFMNMMQGVAQGQEELRALVQRQEAAIPPVNHAP----PEGGPVNG 58

Query: 66   ------LPLYYTANTGAGTSGTTNNGPIPGANLTPVSTALTQAATTVTEPIVNAVPLFVH 119
                  +P+   A  G    G   NG        P++  +  A   V  P  N  P+   
Sbjct: 59   NNVAAAVPINNYA-VGDELGGIRINGQ-------PIAPDVANARA-VRAPARNPAPIVDR 109

Query: 120  ANAHHGSIATTGNMEERMEELAKE---LRREIKANR-GNGDSIKTQDLCLVSKVDVPKKF 175
                   ++   ++  R++E  ++   L  +I+A    N       ++ LV  + +P KF
Sbjct: 110  QEDMFSLLSEDEDVLGRVDERDRKVDALAEKIRAMECQNSLGFDVTNMGLVEGLRIPYKF 169

Query: 176  KVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLMEDAAEWYTSLSKDDVH 235
            K P FDKYNG +CP+ H+  Y RK+  Y D++ + +++FQDSL   + +WY  L +D + 
Sbjct: 170  KAPSFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKRDSIR 229

Query: 236  TFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEM 295
             + +L  AF   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ P + E E+
Sbjct: 230  CWKDLGEAFLRQYKHNMDMAPSRTQLQSLCQKSGESFKEYAQRWRELAARVQPPMLEREL 289

Query: 296  TQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVNASKRYGN 355
            T  F+ TL+  +++RM      +FS++V  G R E  ++ G I     ++  ++SK+   
Sbjct: 290  TDMFIGTLQGVFMDRMGSCPFVSFSDVVICGERTESLIKTGKI----QDAGSSSSKKPFA 345

Query: 356  GHHKKKETEVGMVSAGAGQSMATVAPINATQMPPSYPYMPYSQHPFFPPFYHQYPLPPGQ 415
            G  +++E E   V     Q+ +    + A  +P                     P P  Q
Sbjct: 346  GAPRRREGETNAVQYRRDQNRSQRCQVAAVTIPA--------------------PQPRQQ 385

Query: 416  PQVPVNAIAQQMKQQMPVQQQQQNQQARPTFPPIPMLYAELLPTLLQRGHCTTRQGKPPP 475
             Q  V    QQ +QQ P Q +Q+    R  F  +PM YAELLP LL+ G    R    PP
Sbjct: 386  QQQRVQQPQQQQQQQRPYQPRQRMPDRR--FDSLPMSYAELLPELLRLGMVELRT-MAPP 442

Query: 476  DPLPPRFRSDLKCDFHQGALGHDVEGCYALKYIVKKLIDQGKLTFENNVPHVLDNPLPNH 535
              LPP + ++++CDFH GA GH  E C AL++ V+ LID   + F   VP+V++NP+P H
Sbjct: 443  TVLPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFAP-VPNVVNNPMPQH 501

Query: 536  A--TVNMIEVCE-EAPRLDVRNVATPLVPLHIKLRKASLFNHDHAKCLGCLRDPLGCYTV 592
                VN IE  E E   ++V +V T L+ +  +L    +++     CLGC     GC  +
Sbjct: 502  GGHRVNNIEGKEAEDLVVNVDDVQTSLLVVKGRLLNGGVYSGCDEDCLGCAESENGCDQL 561

Query: 593  QEDIQSLMNDNLL----------TVSDVCVIVP--------VFHDPPVKSTPLKKN---- 630
            +  IQ +M++  L          TVS + +           V   P    TP+  +    
Sbjct: 562  RTGIQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGRGQRVVSAPATNGTPVTISVPVT 621

Query: 631  -AEPLVIRLPGPIPYVSDKAVPYKY-----------------NATMIENGV--EVPLASF 670
             + P  I   G     + +AVP+KY                 N   +  G+   VP    
Sbjct: 622  ISAPTTIAASGRRAVENSRAVPWKYDNAYRSNRRAESQTRPVNQAPVTIGLPNRVPATVG 681

Query: 671  ATVSNIAEGTSAALRSGKVRPPLFQKKVATPIIPPVEEATPTVVSPIATDVSQPGKSIED 730
              V N+  G     RSG++  P   +      +   +     VV         P  S E 
Sbjct: 682  PAVDNVG-GPGGFTRSGRLFAPQPLRDNNAEALAKAK-GKQAVVEEEPVQKEAPEGSFE- 738

Query: 731  SNLDEILRIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVLEQAYVDHEVTVD 790
             +++E ++IIK+SDYKIVDQL QTPSKIS+LSLLL SEAHRN LLK+L  AYV  E++V+
Sbjct: 739  KDVEEFMKIIKKSDYKIVDQLNQTPSKISILSLLLCSEAHRNALLKMLNLAYVPQEISVN 798

Query: 791  RFGGIVGNITACNNLWFSEEELPEVGKSHNLALHISLNCKSDMISNVLVDTGSSLNVMPK 850
            +  G++ N++  + + F+  +L   G++HN ALHI++ CK  ++S+VLVDTGSSLNV+PK
Sbjct: 799  QLEGVMANVSTRHGVGFTNLDLTPEGRNHNKALHITMECKGAVLSHVLVDTGSSLNVLPK 858

Query: 851  TTLDQLSYRGTPLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSC 910
              L ++   G  L  S  +V+AFDGS+++V GE+ LP+ IGPE F + F VMDI  +YSC
Sbjct: 859  QILKKIDVEGFVLTPSDLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQPAYSC 918

Query: 911  LLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCVEA-GSAEGT-- 967
            LLGRPWIH AGAV+STLHQKLK+V NG++VT+ GEE  LVS LSSF  VE  G    T  
Sbjct: 919  LLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEEILVSHLSSFKYVEVDGEIHETLC 978

Query: 968  -AFQGLTIES---AESKEAGAAMASLKDAQRAIQEGQTAGWGKMIQLCENKRKEGLGFSP 1023
             AF+ + +E    AE ++ GA++ S K A+  +  G+  GWGKM+ L   + K G+G+ P
Sbjct: 979  QAFETVALEKVAYAEQRKPGASITSYKQAKEVVDSGKAEGWGKMVYLPVKEDKFGVGYEP 1038

Query: 1024 SSRVSSG-----VFHSAGFVNAISEEATGSG-----------LRPAFVTPGGIATNWDAI 1067
                 +G      F SAG +N     ATGS            +RP    PGG   NW A 
Sbjct: 1039 LQAEQNGQAGPSTFTSAGLMNHGDVSATGSEDCDSDCDLDNWVRPC--APGGSINNWTAE 1096

Query: 1068 DIPSIMHVSELNHNKPVEHSNPTVPPSFDFPVYEAEDEEGDN--IPYEITRLLEQEKKAI 1125
            ++  +  ++E +      +++      F  P+Y+AE+E  ++  +P E+ RLL QE++ I
Sbjct: 1097 EVVQVTLLTESDLMAFTMNNSVMAQYDFGNPIYQAEEESEEDCELPAELVRLLRQEERVI 1156

Query: 1126 QPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMI 1185
            QPHQEE+E++N+GTE+ KREIKIGA LE+ VK+++I++LREY +IFAWSY+DMPGLD  I
Sbjct: 1157 QPHQEELEVVNLGTEDAKREIKIGAALEDSVKRRLIEMLREYVEIFAWSYQDMPGLDTDI 1216

Query: 1186 VEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKK 1245
            V HR+P +  CP V+QKLRRT PDMA KIK EVQKQ DAGFL    YP WVANIVPVPKK
Sbjct: 1217 VVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVTSYPPWVANIVPVPKK 1276

Query: 1246 DGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDRE 1305
            DGKVRMCVD+RDLN+ASPKD+FPLPHIDVLVDNTAQS VFSFMDGFSGYNQIKM+PED E
Sbjct: 1277 DGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSGYNQIKMAPEDME 1336

Query: 1306 KTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQH 1365
            KT+FITPWGTF YKVMPFGL NAGATYQR MTTLFHDM+HKE+EVYVDDMI KS  EE+H
Sbjct: 1337 KTTFITPWGTFYYKVMPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAKSQTEEEH 1396

Query: 1366 VEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQT 1425
            +  L K+F+RLRK+KLRLNPNKCTFGVRSGKLLGFIVS+KGIEVDP KV+AI+EMP P+T
Sbjct: 1397 LVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQEMPEPKT 1456

Query: 1426 EKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPI 1485
            EKQVRGFLGRLNYI+RFISH+TATC PIFKLLRKNQ I WND+CQ+AFD IK YL +PPI
Sbjct: 1457 EKQVRGFLGRLNYIARFISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKEYLQKPPI 1516

Query: 1486 LVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCC 1545
            L PPV GRPLIMYL+V + SMGCVLGQ DE+G+KEHAIYYLSKKFTDCETRY++LEKTCC
Sbjct: 1517 LTPPVPGRPLIMYLSVTENSMGCVLGQHDESGRKEHAIYYLSKKFTDCETRYSLLEKTCC 1576

Query: 1546 ALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAI 1605
            ALAWAA+RLR Y++NHTT LIS+MDP+KYIFEK A+TG++ARWQM+L+EYDI + +QKAI
Sbjct: 1577 ALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQYTSQKAI 1636

Query: 1606 KGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAV 1665
            KGSIL+D+LA QP++DYQ + F+FPDE+IMYLK KDCEEPL+ EGPDP+ KW L+FDGAV
Sbjct: 1637 KGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKVKDCEEPLVEEGPDPDDKWTLMFDGAV 1696

Query: 1666 NAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDS 1725
            N  G G+GAV+++P+G HIPF+AR+ F+ TNN AEYEACI GIEEAID+RIK LDIYGDS
Sbjct: 1697 NMNGNGVGAVLINPKGAHIPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIYGDS 1756

Query: 1726 ALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADALATLSSM 1782
            ALV+NQ+ G+W T+   LIPY DY RR+LT+F KV L+H+PRDENQMADALATLSSM
Sbjct: 1757 ALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVRLYHVPRDENQMADALATLSSM 1813


>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09 [Oryza sativa]
          Length = 2876

 Score =  903 bits (2334), Expect = 0.0
 Identities = 480/1140 (42%), Positives = 685/1140 (59%), Gaps = 37/1140 (3%)

Query: 1113 EITRLLEQEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFA 1172
            ++   L+Q     QP  +E+  +N+GTE++ R I +   L E  ++     L E+ D FA
Sbjct: 1759 DVAGALKQLDDGGQPTIDELVEMNLGTEDDPRPIFVSGMLTEEEREDYRSFLMEFRDCFA 1818

Query: 1173 WSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEY 1232
            W+Y++MPGLD  +  H++   P+  PV+Q  RR  P+   ++ +EV + I+ GF+  ++Y
Sbjct: 1819 WTYKEMPGLDSRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLINVGFIKEIQY 1878

Query: 1233 PEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFS 1292
            P W+ANIVPV KK+G+VR+CVDFRDLN+A PKD+FPLP  +++VD+T            S
Sbjct: 1879 PRWLANIVPVEKKNGQVRVCVDFRDLNRACPKDDFPLPITEMVVDSTTG------YGALS 1932

Query: 1293 GYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYV 1352
            GYNQIKM   D   T+F TP G F Y VMPFGL NAGATYQR M  +  D+IH  VE YV
Sbjct: 1933 GYNQIKMDLLDAFDTAFRTPKGNFYYTVMPFGLKNAGATYQRAMQFVLDDLIHHSVECYV 1992

Query: 1353 DDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPD 1412
            DDM+VK+ D E H E L  +FERLR+++L++NP KC F V+SG  LGF++  +GIE++P 
Sbjct: 1993 DDMVVKTKDHEHHQEDLRIVFERLRRHQLKMNPLKCAFAVQSGVFLGFVIRHRGIEIEPK 2052

Query: 1413 KVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQEA 1472
            K++AI  MP PQ  K +R   G+L YI RFIS+++    P  KL++K  P VW++ECQ  
Sbjct: 2053 KIKAILNMPPPQELKDLRKLQGKLAYIRRFISNLSGRIQPFSKLMKKGTPFVWDEECQNG 2112

Query: 1473 FDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTD 1532
            FDSIK YLL PP+L  PV+GRPLI+Y+A    S+G +L Q ++ G KE A YYLS+    
Sbjct: 2113 FDSIKRYLLNPPVLAAPVKGRPLILYIATQPASIGALLAQHNDEG-KEVACYYLSRTMVG 2171

Query: 1533 CETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLL 1592
             E  Y+ +EK C AL +A K+LRHY++ H   LI+R DPI+Y+  +  +TG++ +W +L+
Sbjct: 2172 AEQNYSPIEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVLSQPVLTGRLGKWALLM 2231

Query: 1593 SEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPD 1652
             EYDI F  QKAIKG  LA+ LA  P+ D   +  + PDEEI   + ++           
Sbjct: 2232 MEYDITFVPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFTAELQE----------- 2280

Query: 1653 PNSKWGLVFDGA----VNAYG-----KGMGAVIVSPQGHHIPFTARIL-FECTNNMAEYE 1702
               +W L FDGA    +N  G      G G V  +PQG  I  +  +L  EC+NN AEYE
Sbjct: 2281 ---QWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHSFSLLKEECSNNEAEYE 2337

Query: 1703 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVEL 1762
            A IFG+  A+ M ++ L  +GDS L+I QI   +E    +L+PY+  ARRL+  F  +E+
Sbjct: 2338 ALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPYYTVARRLMDKFEHIEV 2397

Query: 1763 HHIPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY 1822
             H+PR +N  ADALA L++       N   I+  +R   P+ +  I + ++    N    
Sbjct: 2398 IHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLELIPEEVNIIITNSAEE 2457

Query: 1823 RPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDM-VLLRCVDEHE 1881
              W      +      P      +++ L+R    ++    +LYKR+Y   VLLRCVD  E
Sbjct: 2458 EDWRQPFLDYFKHGSLP--EDPVERRQLQRRLPSYIYKAGVLYKRSYGQEVLLRCVDRSE 2515

Query: 1882 AEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVP 1941
            A +++ +VH G  G H +G  M   +   GYYW  +  DC + A+ CH CQI+ +  H P
Sbjct: 2516 ANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTAKTCHGCQIHDNFKHQP 2575

Query: 1942 PHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVA 2001
            P  L+     WPF  WGID+IG I P +S GHRFIL A DYF+KW EA     V    V 
Sbjct: 2576 PAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSKWAEAVPLREVKSSDVI 2635

Query: 2002 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2061
             F++ +II R+GVP +I +DN     +  +    E++KI+ + S+ Y PQ NG  EA NK
Sbjct: 2636 NFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYSTGYYPQANGMAEAFNK 2695

Query: 2062 NIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2120
             + +I++K V  + +DWH+ L  AL  YR TVR+ T ATP+SLVYG EAVLPLE+++PSL
Sbjct: 2696 TLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLVYGNEAVLPLEIQLPSL 2755

Query: 2121 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPREFKVGE- 2179
            RV +  +L++ E  + R+ +L+ +EE+R+ A+     Y+  M  A+DK V  R F+ GE 
Sbjct: 2756 RVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVRAYDKLVKQRVFRKGEL 2815

Query: 2180 -LVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2238
             LVL+R I      +GK+ P +EGPYV+++A+ GGA  L    G +   P+N   +KKYF
Sbjct: 2816 VLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQGSQPMPPINGRFLKKYF 2875



 Score =  115 bits (288), Expect = 2e-23
 Identities = 85/288 (29%), Positives = 136/288 (46%), Gaps = 21/288 (7%)

Query: 678  EGTSAALRSGKVRPPLFQKKVATPIIPPVEEATPTVVSPIATDVSQPGKSIEDSNLDEIL 737
            E  + +LR GK  P   + KV   +  P ++A+P   +P A +     K           
Sbjct: 1252 EEVNISLRGGKTLPDPHKSKVPN-VDKPAKKASPPGEAPEAPETKTGSKEKP-------- 1302

Query: 738  RIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVLEQAYVDHEVTVDRFGGIVG 797
                  DYK++  L + P+ +SV   L+     R  L+K L+   V +EV + +   +  
Sbjct: 1303 ----AVDYKVLAHLKRIPALLSVYDALMMVPDLREALIKALQAPEV-YEVDMAKHR-LYD 1356

Query: 798  NITACNNLWFSEEELPEVGKSHNLALHISLNCKSDMISNVLVDTGSSLNVMPKTTLDQLS 857
            N    N + F++E+    G  HN  L+I  N  S  +  +L+D GS++N++P  +L +  
Sbjct: 1357 NPLFVNEITFADEDNIIKGGDHNRPLYIEGNIGSAHLRRILIDLGSAVNILPVRSLTRAG 1416

Query: 858  YRGTPLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWI 917
            +    L     ++  FD   K  LG I + I +   +F V F V++ N SYS LLGRPWI
Sbjct: 1417 FTTKDLEPIDVVICGFDNQGKPTLGAITIKIQMSTFSFKVRFFVIEANTSYSALLGRPWI 1476

Query: 918  HDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCVEAGSAE 965
            H    V STLHQ LKF+        +G +  + S  S ++  E+  A+
Sbjct: 1477 HKYRVVPSTLHQCLKFLDG------NGVQQRITSNFSPYTIQESYHAD 1518


>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
          Length = 1027

 Score =  762 bits (1968), Expect = 0.0
 Identities = 418/1063 (39%), Positives = 617/1063 (57%), Gaps = 39/1063 (3%)

Query: 1178 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVA 1237
            M G+ P I  HR+       PVRQ++RR HPD    I++E+ K ++AGF+  V YP+W+A
Sbjct: 1    MKGIHPSITSHRLNVVSTARPVRQRIRRFHPDRQRVIRNEIDKLLEAGFIREVSYPDWLA 60

Query: 1238 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1297
            N+V VPKK+GK R+CVD+ +LN A PKD+FPLP ID +VD+T+   + SF+D FSGY+QI
Sbjct: 61   NVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTSGQGMLSFLDAFSGYHQI 120

Query: 1298 KMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIV 1357
             MSP+D EK +FITP   +CYKVMPFGL NAGATYQR MT +F  +I   VEVY+DD++V
Sbjct: 121  PMSPDDEEKIAFITPHDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGHSVEVYIDDIVV 180

Query: 1358 KSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1417
            KS   EQH+ +L ++F  LR+Y ++LNP+KC FGV + K LGF+VSQ+GIEV PD+V+A+
Sbjct: 181  KSKTREQHILHLQEVFYLLRRYGMKLNPSKCAFGVSARKFLGFMVSQRGIEVSPDQVKAV 240

Query: 1418 REMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIK 1477
             E P P+ +K+++   G+L  + RFI+       P F  +RK     W D CQ A + IK
Sbjct: 241  METPPPRNKKELQRLTGKLVALGRFIARFIDELRPFFLAIRKAGTHGWTDNCQNALERIK 300

Query: 1478 NYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRY 1537
            +YL++PPIL  P+    L MYLAV + ++  VL  +  + K++  IYY+S+   D ETRY
Sbjct: 301  HYLMQPPILSSPIPKEKLYMYLAVSEWAISAVL-FRCPSPKEQKPIYYVSRALADVETRY 359

Query: 1538 TMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDI 1597
            + +E    AL  AA++LR Y   H   ++    P++ I  K  +TG++ +W + LSE+ I
Sbjct: 360  SKMELISLALRSAAQKLRPYFQAHPV-IVLTDQPLRNILHKPDLTGRMLQWAIELSEFGI 418

Query: 1598 VFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKW 1657
             F+ + ++KG ++AD           ++E+                +P  +EG      W
Sbjct: 419  EFQPRLSMKGQVMADF----------VLEYS--------------RKPGQHEGSRKKEWW 454

Query: 1658 GLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIK 1717
             L  DGA  + G G+G ++ SP G H+    R+ F  +NN AEYEA + G++ A+ + + 
Sbjct: 455  TLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 514

Query: 1718 HLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADALA 1777
             L I+ DS LV+  ++ E+E   A++  Y    R  L  FT+  +  I R +N+ ADALA
Sbjct: 515  KLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALA 574

Query: 1778 TLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGYRPWYYDIKQFLLSRE 1837
             +++   +     +PI     ++    V  I  +           + W  DI +++ +  
Sbjct: 575  GIAASLSIKEAILLPI----HVQTNPSVSEI-SICSTTEAPQADDQEWMNDITEYIRTGT 629

Query: 1838 YPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLVHDVHDGTFGTH 1897
              PG  KQ  K +R  A RF L G  LYKR++    LRC+   EA+ ++ ++H+G +G H
Sbjct: 630  L-PGDPKQAHK-VRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGIYGNH 687

Query: 1898 ATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMW 1957
            + G +++ +    GYYW  M+ +   Y ++C KCQ YA   H+P   L  +S PWPF+ W
Sbjct: 688  SGGRSLAHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPSTTLKSISGPWPFAQW 747

Query: 1958 GIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSK 2017
            G+D++ R  P A    +F+LVA DYF+KWVEA +Y +   + V KF+  NIICR+G+P  
Sbjct: 748  GMDIV-RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTKFVWKNIICRFGIPQT 806

Query: 2018 IITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYK-D 2076
            II DNG   ++   +  C E  I +  S+P  PQ NG  EA NK +   ++K +   K  
Sbjct: 807  IIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKRLEQAKGK 866

Query: 2077 WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQS 2136
            W E LP  L  YRTT    TG TPF+L YGM+AV+P+E+ +P++     AK S+A     
Sbjct: 867  WVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIWT-NAAKQSDANMQLG 925

Query: 2137 RYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPREFKVGELVLKRRISQQPD-PRGK 2195
            R   L+  +E R  A  R   YQ R  A +++KV PR  K G LVL++      +   GK
Sbjct: 926  R--NLDWTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLVLRKFFENTTEVGAGK 983

Query: 2196 WTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2238
            +  N+EGPY+V KA   GA  L  +DG  L  P N   +K+Y+
Sbjct: 984  FQANWEGPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026


>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  754 bits (1948), Expect = 0.0
 Identities = 424/1113 (38%), Positives = 626/1113 (56%), Gaps = 41/1113 (3%)

Query: 1133 ELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPT 1192
            E++NI   +  R + +GA +   ++ ++I LL+     FAWS EDM G+DP I  H +  
Sbjct: 759  EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 818

Query: 1193 KPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMC 1252
             P   PV+QK R+  P+ A  +  EV+K + AG ++ V+YPEW+AN V V KK+GK R+C
Sbjct: 819  DPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVC 878

Query: 1253 VDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITP 1312
            VD+ DLNKA PKD++PLPHID LV+ T+ + + SFMD FSGYNQI M  +D+EKTSF+T 
Sbjct: 879  VDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTD 938

Query: 1313 WGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKM 1372
             GT+CYKVM FGL NAGATYQR +  +  D I + VEVY+DDM+VKS   E HVE+L+K 
Sbjct: 939  RGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKC 998

Query: 1373 FERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGF 1432
            F+ L  Y ++LNP KCTFGV SG+ LG++V+++GIE +P ++RAI E+P+P+  ++V+  
Sbjct: 999  FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1058

Query: 1433 LGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEG 1492
             GR+  ++RFIS  T  C P + LL++     W+ + +EAF+ +K+YL  PPILV P  G
Sbjct: 1059 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1118

Query: 1493 RPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAK 1552
              L +Y+AV D ++  VL ++D    ++  I+Y SK   + ETRY ++EK   A+  +A+
Sbjct: 1119 ETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSAR 1176

Query: 1553 RLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILAD 1612
            +LR Y  +HT  +++   P++      + +G++ +W + LSEYDI F+ + A+K  +LAD
Sbjct: 1177 KLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLAD 1235

Query: 1613 HLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGM 1672
             L   PL   +        EE                       W L  DG+ +A G G+
Sbjct: 1236 FLIELPLQSAERAVSGNRGEE-----------------------WSLYVDGSSSARGSGI 1272

Query: 1673 GAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQI 1732
            G  +VSP    +  + R+ F  TNN+AEYE  I G+  A  M+I  +  + DS L+  Q+
Sbjct: 1273 GIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQL 1332

Query: 1733 KGEWETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVP 1792
             GE+E  + K+  Y    + +   F   +L  IPR +N  ADALA L+     +    +P
Sbjct: 1333 SGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALALTSDSDLRRIIP 1392

Query: 1793 I--IKGQRLERPSHVFAIGDVIDQAGENVVGYRPWYYDIKQFLLSREYPPGASKQDKKTL 1850
            +  I    ++    V  +  +      +      W  +I+ +L       G    DK T 
Sbjct: 1393 VESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYL-----SDGTLPSDKWTA 1447

Query: 1851 RRL---AGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLVHDVHDGTFGTHATGHTMSRKL 1907
            RRL   A ++ L  + L K +    +L C+   E  +++ + H+G  G H+ G  ++ KL
Sbjct: 1448 RRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRALALKL 1507

Query: 1908 LRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEP 1967
             + G+YW  M  DC  +  KC +CQ +A  IH P   L    +P+PF  W +D++G +  
Sbjct: 1508 KKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVGPM-- 1565

Query: 1968 KASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLN 2027
             AS   RFILV  DYFTKWVEA SY  +    V  F+   IICR+G+P +IITDNG+   
Sbjct: 1566 PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNGSQFI 1625

Query: 2028 NNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKD-WHEMLPYALH 2086
            +   +  C  +KI  + S+P  PQ NG  EA NK I   ++K +   K  W + L   L 
Sbjct: 1626 SLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELDGVLW 1685

Query: 2087 GYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEE 2146
             YRTT RS+T  TPF+  YGMEA+ P EV   SLR  M  K  E    +   D+L+ +EE
Sbjct: 1686 SYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLDDLEE 1744

Query: 2147 KRMDAMARGHSYQARMKAAFDKKVNPREFKVGELVLKRRISQQPD-PRGKWTPNYEGPYV 2205
             R  A+ R  +YQ      +++KV+ R F VG+LVL++      +   GK   N+EG Y 
Sbjct: 1745 IRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQ 1804

Query: 2206 VKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2238
            V K    G   L  M G  +P   N+  +K+Y+
Sbjct: 1805 VSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837



 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 51/180 (28%), Positives = 85/180 (46%), Gaps = 7/180 (3%)

Query: 807 FSEEELPEVGKSHNLALHISLNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRS 866
           F++ +L  +   HN  L + L      ++ VL+DTGSS++++ K  L  ++     ++  
Sbjct: 602 FTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPV 661

Query: 867 TFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTST 926
           +  +  FDG     +G I LPI +G     V F V+   A Y+ +LG PWIH   A+ ST
Sbjct: 662 SKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIPST 721

Query: 927 LHQKLKFVKNGKLVTIHG-------EEAYLVSQLSSFSCVEAGSAEGTAFQGLTIESAES 979
            HQ +KF  +  + T+           +Y  S+L     V    ++ T   G+  E + S
Sbjct: 722 YHQCVKFPTHNGIFTLRAPKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAEISPS 781



 Score = 44.3 bits (103), Expect = 0.044
 Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 4/172 (2%)

Query: 179 EFDKYNGLTCPQNHIVKY---VRKMGNYKDN-DSLMIHYFQDSLMEDAAEWYTSLSKDDV 234
           + + YNG   P+  +  +   + +     DN D+     F + L   A  W++ L  + +
Sbjct: 220 KLESYNGRNDPKEFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSI 279

Query: 235 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEE 294
            +F +L ++F  HY      + +   L S+SQ  +ES R +  R++     IT   +   
Sbjct: 280 DSFHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNITVPDEAAI 339

Query: 295 MTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 346
           +           + + + + AP+   + +   +R  E   + +I+  K  S+
Sbjct: 340 VALRNAVWYDSRFRDDITLHAPSTLEDALHRASRFIELEEEKLILARKHNST 391


>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
          Length = 1580

 Score =  753 bits (1944), Expect = 0.0
 Identities = 419/1105 (37%), Positives = 634/1105 (56%), Gaps = 66/1105 (5%)

Query: 1141 ENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVR 1200
            ++  EI I   + +G +  +I+LL+E+ D F W Y +MPG    IVEHR+P KP   P +
Sbjct: 528  DDLEEIDISPAIGQG-RHLLIELLKEFRDCFTWEYYEMPGHSRSIVEHRLPLKPGVRPHQ 586

Query: 1201 QKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNK 1260
            Q  RR   DM   +K+E+++  DAGF+    Y EWV++IVPV KK+GKVR+C+DFR LNK
Sbjct: 587  QLPRRCKADMLEPVKAEIKRLYDAGFIRPCRYAEWVSSIVPVIKKNGKVRVCIDFRYLNK 646

Query: 1261 ASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPW--GTFCY 1318
            A+PKD +P+   D LVD  +  K+ SFMDG +GYNQI M+ ED  KT+F  P   G F +
Sbjct: 647  ATPKDEYPMLVADQLVDAASGHKILSFMDGNAGYNQIFMAEEDIHKTTFRCPGAIGLFEW 706

Query: 1319 KVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRK 1378
             V+ F L +AGATYQR M  ++HD+I   VEVY+DD++VKS + E H+  L K+FER RK
Sbjct: 707  VVITFVLKSAGATYQRAMNYIYHDLIGWLVEVYIDDVVVKSKEIEDHIADLRKVFERTRK 766

Query: 1379 YKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNY 1438
            Y L++NP KC FGV +G+ LGF+V ++GIEV    + AI+++  P+ + +++  +G++N+
Sbjct: 767  YGLKMNPTKCAFGVSAGQFLGFLVHERGIEVTQRSINAIKKIKPPEDKTELQEMIGKINF 826

Query: 1439 ISRFISHMTATCGPIFKLLR--KNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLI 1496
            + RFIS ++    P   LLR   +Q   W  E Q+A D+IK YL  PP+L+PP +G P  
Sbjct: 827  VRRFISILSGKLEPFTPLLRLKADQQFAWGAEQQKALDNIKEYLSSPPVLIPPQKGIPFR 886

Query: 1497 MYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 1556
            +YL+  D+S+  VL Q+ E  +KE  ++YLS++  + ETRY+ +EK C  L ++  RLRH
Sbjct: 887  LYLSAGDKSISSVLIQELE--RKERVVFYLSRRLLNAETRYSPVEKLCLCLYFSCTRLRH 944

Query: 1557 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 1616
            YL+++   +I + D +KY+     + G+I +W   L+E+D+ +++ KAIKG  +A+ +  
Sbjct: 945  YLLSNECTVICKADVVKYMLSAPILKGRIGKWIFSLTEFDLRYESPKAIKGQAIANFIV- 1003

Query: 1617 QPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGMGAVI 1676
                       D+ D+ I               G      W L FDG+V  +G G+G VI
Sbjct: 1004 -----------DYRDDSI---------------GSVEVVPWTLFFDGSVCTHGCGIGLVI 1037

Query: 1677 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 1736
            +SP+G    F   I    TNN AEYEA + G++   ++    ++I GDS LVI+Q+ GE+
Sbjct: 1038 ISPRGACFEFAYTIKPYATNNQAEYEAVLKGLQLLKEVEADTIEIMGDSLLVISQLAGEY 1097

Query: 1737 ETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKG 1796
            E  +  LI Y++  + L+  F  V L H+ R++N  A+ LA  +S +++       +IK 
Sbjct: 1098 ECKNDTLIVYNEKCQELMREFRLVTLKHVSREQNIEANDLAQGASGYKL-------MIKH 1150

Query: 1797 QRLERPSHVFAIGDVIDQAGENVVGYRPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR 1856
             ++E                  V+    W Y + Q+L         S+   + LR  A +
Sbjct: 1151 VQIE----------------VAVITADDWRYYVYQYL------QDPSQSASRKLRYKALK 1188

Query: 1857 FLLDGDILYKRNYDMVLLRCVDEHEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMA 1916
            ++L  D LY R  D VLL+C+   +A+  + +VH+G  GTH + H M   L  AGY+W  
Sbjct: 1189 YILLDDELYYRTIDGVLLKCLSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPT 1248

Query: 1917 MEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFI 1976
            M  DC++Y + C  CQ +      P  A+N +  PWPF  WGIDMIG I P +S GH+FI
Sbjct: 1249 MLEDCFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFI 1308

Query: 1977 LVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCE 2036
            LVA DYFTKWVEA     V      +F++ +II R G+P  I TD G+   ++      +
Sbjct: 1309 LVATDYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFAD 1368

Query: 2037 EFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSS 2095
               I+  NSSPY  Q NG  EA+NK++ +++++ ++ Y + WH  L  AL  YR     S
Sbjct: 1369 SMGIKLLNSSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMACHGS 1428

Query: 2096 TGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARG 2155
                P+ LVY  +A+LP EV I S R  ++  L+  E+     D+   + + R+ A+A+ 
Sbjct: 1429 IQVPPYKLVYRHKAILPWEVRIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRALAKV 1488

Query: 2156 HSYQARMKAAFDKKVNPREFKVGELVLK--RRISQQPDPRGKWTPNYEGPYVVKKAFSGG 2213
               + R+   ++KKV P++F  GEL+ K    I  +    GKW+PN+EGP+ + K  S G
Sbjct: 1489 IKDKERVTRHYNKKVVPKDFSEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKG 1548

Query: 2214 ALILTHMDGVELPNPVNADIVKKYF 2238
            A +L  +DG      +N   +KKY+
Sbjct: 1549 AYMLQGLDGEVYDRALNGKYLKKYY 1573



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 50/179 (27%), Positives = 90/179 (49%), Gaps = 3/179 (1%)

Query: 811 ELPEVGKSHNLA-LHISLNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFL 869
           E PE  ++ +L  L+I+       +S ++VD G+++N+MP  T  +L      L ++  +
Sbjct: 351 EKPEGTENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMV 410

Query: 870 VKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQ 929
           +K F G+    +G +++ +T+G +    TF V+D   SYS LLGR WIH    + ST+HQ
Sbjct: 411 LKDFGGNPSETMGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTIHQ 470

Query: 930 KLKFVKNGKLVTIHGEEAYLVSQLSSFSCVEAGSAEGTAFQGLTIESAESKEAGAAMAS 988
            L     G  + I   ++ L  +  S+ C E        +   T++  + K+    M++
Sbjct: 471 CL-IQWQGDKIEIVPADSQLKMENPSY-CFEGVMEGSNVYTKDTVDDLDDKQGQGLMSA 527


>UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]
          Length = 2001

 Score =  696 bits (1797), Expect = 0.0
 Identities = 394/1098 (35%), Positives = 616/1098 (55%), Gaps = 56/1098 (5%)

Query: 1146 IKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRR 1205
            I IG  LE+ ++++I+++++E   +FAWS +++ G+D  ++EH +  K    P +QKLRR
Sbjct: 956  ILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIEHNLAIKSGYKPKKQKLRR 1015

Query: 1206 THPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKD 1265
               D     K E++K + A  +  V +PEW+AN V V K +GK RMC+DF DLNKA PKD
Sbjct: 1016 MSTDRQQAAKIELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKD 1075

Query: 1266 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1325
            +FPLP ID LVD TA  ++ SF+D +SGY+Q+ M  ED EKTSFITP+GT+C+  MPFGL
Sbjct: 1076 DFPLPRIDQLVDATAGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGL 1135

Query: 1326 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNP 1385
             NAGAT+ R +  +    + + VE Y+DD++VKS     H + L + FE LRK  ++LNP
Sbjct: 1136 KNAGATFARLIGKVLAKQLGRNVEAYIDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNP 1195

Query: 1386 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1445
             KC FGVR+GKLLGF+VS++GIE +PDK+ AI +M  P+  ++V+   GR+  +SRF+S 
Sbjct: 1196 EKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPKNTREVQRLTGRMASLSRFLSK 1255

Query: 1446 MTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1505
                  P FK LR      W  ECQ+AFD +K YL E P L  P +G+PL+MY+A    +
Sbjct: 1256 SAEKGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLASPPKGQPLLMYVAATPAT 1315

Query: 1506 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1565
            +  VL Q++E   ++  +Y++S+     +TRY+ +EK   A+  A+++LRHY ++H   +
Sbjct: 1316 VSAVLVQEEEN--RQVPVYFVSEALQGPKTRYSEVEKLIYAIVMASRKLRHYFLSHDITI 1373

Query: 1566 ISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLI 1625
             S   PI  +     V G+IA+W M L  +D+ + ++ AIK  +LAD +A          
Sbjct: 1374 PSAY-PIGEVLTNKEVAGRIAKWAMELLPFDLKYISRTAIKSQVLADFVAEWT------- 1425

Query: 1626 EFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIP 1685
                P+E              + +  +    W +  DGA NA G G  AV+ +P    + 
Sbjct: 1426 ----PNE--------------VEQQEEVKKPWIVFSDGACNAAGAGAAAVVKTPMKQTLK 1467

Query: 1686 FTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIP 1745
            ++ +++F  TNN AEYE  +  + +A  +  + L +  DS LV       +E     +  
Sbjct: 1468 YSVQLVFPSTNNTAEYEGVLLAMRKARALGARRLIVKTDSKLVAGHFSKSFEAKEETMAK 1527

Query: 1746 YHDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRV--NHWNDVPIIKGQRLERPS 1803
            Y + AR    +F  + +  I R+EN  AD LA  ++  +   N + D+       + +PS
Sbjct: 1528 YLEEARLNEKHFLGITVKAITREENGEADELAKAAATGQPLENSFFDI-------ITQPS 1580

Query: 1804 HVFAIGDVIDQAGENVVGYRPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDI 1863
            +       I + G+       W   I ++L+S + P    +++ K ++ ++ ++ +    
Sbjct: 1581 YEKKEVACIQREGD-------WREPILKYLVSAQLPE--KEEEAKRIQLMSKKYKVVEGQ 1631

Query: 1864 LYKRNYDMVLLRCVDEHEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQ 1923
            LYK      LL+CV   E  ++V ++H+G  G H    +++ K++R G YW  +  D  +
Sbjct: 1632 LYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGAHQAPWSVASKVIRQGIYWPTIMKDTEK 1691

Query: 1924 YARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 1983
            Y + C  CQ +      PP  L  +   WPF  WGID++G + P+A    RF++VAI+YF
Sbjct: 1692 YIKTCKACQKFGPMTKAPPKELQPIPPVWPFYRWGIDIVGPL-PRAKGDLRFVIVAIEYF 1750

Query: 1984 TKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHH 2043
            ++W+EA +   +T   V KF+  NIICR+G+P +I+ DNG    +   Q +C+   ++ +
Sbjct: 1751 SRWIEAEAVARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQIN 1810

Query: 2044 NSSPYRPQMNGAVEAANKNIKRIVQKMV--TTYKDWHEMLPYALHGYRTTVRSSTGATPF 2101
             +S   PQ NG VE AN  I   ++K +  +    W E L   L   RTTV  STG TPF
Sbjct: 1811 FASVGHPQTNGVVERANGKIMEAIKKRLEGSAKGKWPEDLLSVLWALRTTVVRSTGMTPF 1870

Query: 2102 SLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQAR 2161
             LVYG EA+ P EV   S R+I + K  E      R   L +++E R++A+ +  SY   
Sbjct: 1871 RLVYGDEAMTPSEVGAHSPRMIFDQKDEE-----GREITLEMLDEIRVEALEKMASYTEG 1925

Query: 2162 MKAAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMD 2221
             K+ +++KV  R  + G+LVLK+ +++     GK    +EGP++VKK    GA  L ++D
Sbjct: 1926 TKSYYNQKVKTRPIEEGDLVLKKVLNEV--AVGKLESKWEGPFIVKKKTETGAFKLAYLD 1983

Query: 2222 GVELPNPVNADIVKKYFA 2239
            G EL +  NA  +KK++A
Sbjct: 1984 GEELKHTWNAVSLKKFYA 2001



 Score = 44.3 bits (103), Expect = 0.044
 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 4/144 (2%)

Query: 807 FSEEELPEVGKSHNLALHISLNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRS 866
           F  E+   +   H   L +S+      +  VL+D GSS +V+      ++      L  +
Sbjct: 760 FGPEDAEGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNA 819

Query: 867 TFLVKAFDGSRKNVLGEIDLPITIGPENFL----VTFQVMDINASYSCLLGRPWIHDAGA 922
              ++ F G + + +G+I L +  G    +    + F V+D+   Y+ +LGR  I+   A
Sbjct: 820 GVPLQGFGGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEA 879

Query: 923 VTSTLHQKLKFVKNGKLVTIHGEE 946
           +    +  +K      ++T+ GE+
Sbjct: 880 IIHHNYICMKLPGLRGVITVRGEQ 903


>UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]
          Length = 1986

 Score =  695 bits (1793), Expect = 0.0
 Identities = 408/1142 (35%), Positives = 612/1142 (52%), Gaps = 59/1142 (5%)

Query: 1111 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1169
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 891  PRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREEIRLAATTESA----LITFLQNNKD 946

Query: 1170 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMT 1229
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 947  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1006

Query: 1230 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1289
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1007 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1066

Query: 1290 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1349
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1067 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1126

Query: 1350 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1409
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1127 AYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1186

Query: 1410 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDEC 1469
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1187 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1246

Query: 1470 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1525
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1247 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1306

Query: 1526 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1585
            +S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1307 VSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1365

Query: 1586 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEP 1645
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1366 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1411

Query: 1646 LINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1705
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1412 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1460

Query: 1706 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHHI 1765
             G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H+
Sbjct: 1461 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1520

Query: 1766 PRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGYRPW 1825
             R  N+ AD LA   S  R    +DV +   + L  P+             + V+    W
Sbjct: 1521 LRHNNEAADRLANFGSK-REAAPSDVFV---EHLYTPTVPHKDTTQDADTHDVVMVEADW 1576

Query: 1826 YYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEHEA 1882
                 +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV   E 
Sbjct: 1577 REPFIRFLSSQELP-----QDKDEAERISRRSKLYVMHESELYKKSPSGILQRCVSLEEG 1631

Query: 1883 EQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPP 1942
             QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P 
Sbjct: 1632 RQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPA 1691

Query: 1943 HALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAK 2002
              L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      
Sbjct: 1692 QELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARD 1750

Query: 2003 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKN 2062
            F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  
Sbjct: 1751 FF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGM 1809

Query: 2063 I-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 2117
            I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE 
Sbjct: 1810 ILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEF 1869

Query: 2118 PSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPREFKV 2177
             SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F V
Sbjct: 1870 ESLRF---RNFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLV 1926

Query: 2178 GELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2237
            G+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++++
Sbjct: 1927 GDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRF 1984

Query: 2238 FA 2239
            +A
Sbjct: 1985 YA 1986



 Score = 54.7 bits (130), Expect = 3e-05
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 33/264 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           REY +R+     +I+  + ++ +   F K ++ + +       P       T+    E+A
Sbjct: 532 REYIRRFSEQRNKISD-ISDDVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 585

Query: 333 VRDGIIVFEKAESSVNASKRY---------------GNGHHKKKETEVGMVSAGAGQSMA 377
                  + KAE +V ASK+                G+ +HK ++ +   + A A  S  
Sbjct: 586 NE-----YAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSR 640

Query: 378 TVAPINATQ--MPPSYPYMPYSQH 399
             + +N     M    P+ P S H
Sbjct: 641 QRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 844 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]
          Length = 1991

 Score =  693 bits (1788), Expect = 0.0
 Identities = 403/1139 (35%), Positives = 611/1139 (53%), Gaps = 53/1139 (4%)

Query: 1111 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1169
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 896  PRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREEIRLAATTESA----LITFLQNNKD 951

Query: 1170 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMT 1229
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 952  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1011

Query: 1230 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1289
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1012 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1071

Query: 1290 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1349
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1072 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1131

Query: 1350 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1409
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1132 AYVDDVVVKTKQKDDLILDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1191

Query: 1410 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDEC 1469
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1192 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1251

Query: 1470 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1525
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1252 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1311

Query: 1526 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1585
            +S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1312 VSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1370

Query: 1586 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEP 1645
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1371 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1416

Query: 1646 LINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1705
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1417 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1465

Query: 1706 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHHI 1765
             G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H+
Sbjct: 1466 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1525

Query: 1766 PRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGYRPW 1825
             R  N+ AD LA   S  R    +DV +   + L  P+        +    +  +    W
Sbjct: 1526 LRHNNEAADRLANFGSK-REAAPSDVFV---EHLYSPTVPHKDATQVADTHDIAMVEADW 1581

Query: 1826 YYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQL 1885
               + +FL S+E P    K + + + R +  +++    LYK++   +L RCV   E  QL
Sbjct: 1582 REPLIRFLTSQELP--QYKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1639

Query: 1886 VHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHAL 1945
            + D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L
Sbjct: 1640 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1699

Query: 1946 NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIK 2005
              +   WPF++WG+DM+G  + KA  G+  + +AID F+KW+EA     +T      F  
Sbjct: 1700 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFMAIDKFSKWIEAKPVVTITADNARDFF- 1757

Query: 2006 NNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-- 2063
             NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I  
Sbjct: 1758 INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1817

Query: 2064 ---KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2120
                R+  ++      W   LP  L   RTT   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1818 RIKARVFDRLKPYAGKWVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1877

Query: 2121 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPREFKVGEL 2180
            R        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F VG+L
Sbjct: 1878 RF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1934

Query: 2181 VLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2239
            VL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1935 VLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHIRRFYA 1991



 Score = 54.7 bits (130), Expect = 3e-05
 Identities = 62/264 (23%), Positives = 112/264 (41%), Gaps = 33/264 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 421 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 477

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 478 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 536

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           REY +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 537 REYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 590

Query: 333 VRDGIIVFEKAESSVNASKRY---------------GNGHHKKKETEVGMVSAGAGQSMA 377
                  + KAE +V ASK+                G+ +HK ++ +   + A A  S  
Sbjct: 591 NE-----YAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSR 645

Query: 378 TVAPINATQ--MPPSYPYMPYSQH 399
             + +N     M    P+ P S H
Sbjct: 646 QRSRVNTFDKIMNSQCPHHPNSNH 669



 Score = 49.3 bits (116), Expect = 0.001
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 945
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K      ++T+  +
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVLTLRSD 905


>UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]
          Length = 1986

 Score =  692 bits (1787), Expect = 0.0
 Identities = 409/1144 (35%), Positives = 611/1144 (52%), Gaps = 63/1144 (5%)

Query: 1111 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1169
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 891  PRGVLTLRSDIKQAVTCDKESCDMAQTREIASAREEIRLAATTESA----LITFLQNNKD 946

Query: 1170 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMT 1229
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 947  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1006

Query: 1230 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1289
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1007 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1066

Query: 1290 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1349
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1067 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1126

Query: 1350 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1409
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1127 AYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1186

Query: 1410 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDEC 1469
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1187 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1246

Query: 1470 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1525
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1247 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1306

Query: 1526 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1585
            +S+   D + RY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1307 VSEVLADSKARYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1365

Query: 1586 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEP 1645
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1366 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1411

Query: 1646 LINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1705
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1412 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1460

Query: 1706 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHHI 1765
             G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H+
Sbjct: 1461 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1520

Query: 1766 PRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY--R 1823
             R  N+ AD LA   S  R    +DV +   + L  P+      D    A    +     
Sbjct: 1521 LRHNNEAADRLANFGSK-RETAPSDVFV---EHLYTPT--VPHKDTTQDADTRNIAMVEA 1574

Query: 1824 PWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEH 1880
             W     +FL S+E P     QDK    R++ R   ++L    LYK++   +L RCV   
Sbjct: 1575 DWREPFIRFLTSQELP-----QDKDEAERISRRSKLYVLHESELYKKSPSGILQRCVSLE 1629

Query: 1881 EAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHV 1940
            E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+
Sbjct: 1630 EGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHL 1689

Query: 1941 PPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVV 2000
            P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T    
Sbjct: 1690 PAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNA 1748

Query: 2001 AKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAAN 2060
              F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN
Sbjct: 1749 RDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 1807

Query: 2061 KNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 2115
              I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EV
Sbjct: 1808 GMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEV 1867

Query: 2116 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPREF 2175
            E  SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R F
Sbjct: 1868 EFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAF 1924

Query: 2176 KVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVK 2235
             VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++
Sbjct: 1925 LVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLR 1982

Query: 2236 KYFA 2239
            +++A
Sbjct: 1983 RFYA 1986



 Score = 53.5 bits (127), Expect = 7e-05
 Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 33/264 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 532 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 585

Query: 333 VRDGIIVFEKAESSVNASKRY---------------GNGHHKKKETEVGMVSAGAGQSMA 377
                  + KAE +V ASK+                G+ +HK ++ +   + A A  S  
Sbjct: 586 NE-----YAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSR 640

Query: 378 TVAPINATQ--MPPSYPYMPYSQH 399
             + +N     M    P+ P S H
Sbjct: 641 QRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 47.4 bits (111), Expect = 0.005
 Identities = 33/117 (28%), Positives = 55/117 (46%), Gaps = 5/117 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTF-LVKAFDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 945
            ENF    ++F+V D   +Y  +LG P +    AV    +  +K      ++T+  +
Sbjct: 844 RENFRTENISFEVADFETAYHAILGHPALAKFMAVPHYTYMMMKMPGPRGVLTLRSD 900


>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
          Length = 2013

 Score =  690 bits (1780), Expect = 0.0
 Identities = 406/1112 (36%), Positives = 598/1112 (53%), Gaps = 61/1112 (5%)

Query: 1147 KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPGLDPMIVEHRIPTKPECPPV 1199
            KI  + E   K K I L    P       DIFAW   DMPG+   ++EH +  K +  P+
Sbjct: 944  KISKSGESEAKTKKIPLDPSDPTKTANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPI 1003

Query: 1200 RQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLN 1259
            +Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLN
Sbjct: 1004 KQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN 1063

Query: 1260 KASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYK 1319
            K+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY 
Sbjct: 1064 KSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYV 1123

Query: 1320 VMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKY 1379
             MPFGL NAGATYQR +   F   I + VE YVDD++VK+  ++  +  L + F  +R +
Sbjct: 1124 TMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAF 1183

Query: 1380 KLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYI 1439
            +++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +
Sbjct: 1184 RMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAAL 1243

Query: 1440 SRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYL 1499
            SRF+S +     P FKLL+K     W  E Q+AF+  K  L EPP+L  P    PL++Y+
Sbjct: 1244 SRFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYV 1303

Query: 1500 AVFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLR 1555
            +   + +  VL  +++E G   K +  IY++S+   D +TRY  ++K    +    ++L 
Sbjct: 1304 SATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLS 1363

Query: 1556 HYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1615
            HY   H+  +++   P+  I     V G+IA+W + L   DI FK + +IK   LAD +A
Sbjct: 1364 HYFQGHSVTVVTSF-PLGDILHNREVNGRIAKWALELMSLDISFKPRISIKSQALADFVA 1422

Query: 1616 YQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGMGAV 1675
                 ++   + D P E + +                    W + FDG+    G G G V
Sbjct: 1423 -----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTGAGVV 1457

Query: 1676 IVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGE 1735
            ++SP G  + +   I F  ++N+AEYEA + G+  AI + IK L + GDS LV+NQ+  E
Sbjct: 1458 LISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKE 1517

Query: 1736 WETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIK 1795
            W      ++ Y    R+L   F  +EL H+ R  N+ AD LA   S  R    +DV +  
Sbjct: 1518 WSYLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDVFV-- 1574

Query: 1796 GQRLERPSHVFAIGDVIDQAGENVVGYRPWYYDIKQFLLSREYPPGASKQDKKTLRRLAG 1855
             + L  P+        +    +  +    W   + +FL S+E P     QDK    R++ 
Sbjct: 1575 -EHLYTPTVPHKDTTQVAGTHDAAMVEVDWREPLIRFLTSQELP-----QDKDEAERISR 1628

Query: 1856 R---FLLDGDILYKRNYDMVLLRCVDEHEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGY 1912
            R   ++L    LYK++   +L RCV   E  QL+ D+H G  G HA   T+  K  R G+
Sbjct: 1629 RSKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGF 1688

Query: 1913 YWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNG 1972
            +W     D  +  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G
Sbjct: 1689 FWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGG 1747

Query: 1973 HRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQ 2032
            +  + VAID F+KW+EA     +T      F   NI+ R+GVP++IITDNGT     V +
Sbjct: 1748 YTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFK 1806

Query: 2033 ALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHG 2087
              CE+F I+   +S   P  NG VE AN  I      R+  ++      W + LP  L  
Sbjct: 1807 DFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWS 1866

Query: 2088 YRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEK 2147
             RTT   +TG +PF LVYG EA+LP EVE  SLR        E  + + R D L+ +EE 
Sbjct: 1867 LRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEV 1923

Query: 2148 RMDAMARGHSYQARMKAAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVK 2207
            R  A+ R   Y   ++   ++ V  R F VG+LVL++   Q    R K +P +EGP+++ 
Sbjct: 1924 REAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIIS 1981

Query: 2208 KAFSGGALILTHMDGVELPNPVNADIVKKYFA 2239
            +    G+  L   DG  + N  N + +++++A
Sbjct: 1982 EVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2013



 Score = 53.9 bits (128), Expect = 6e-05
 Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 532 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 585

Query: 333 VRDGIIVFEKAESSVNASKRY----------------GNGHHKKKETEVGMVSAGAGQSM 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 586 NE-----YAKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSS 640

Query: 377 ATVAPINATQ--MPPSYPYMPYSQH 399
              + +N     M    P+ P S H
Sbjct: 641 RQRSRVNTFDKIMNSQCPHHPNSNH 665



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 785 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 845 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
          Length = 2010

 Score =  690 bits (1780), Expect = 0.0
 Identities = 411/1133 (36%), Positives = 606/1133 (53%), Gaps = 66/1133 (5%)

Query: 1129 QEEIELINIGTEENKREI-KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPG 1180
            +E+I L      E +    KI  + E   K K I L    P       DIFAW   DMPG
Sbjct: 922  REDIRLAAATASEGEEPATKISKSGESEAKTKKIPLDPSDPAKTANNKDIFAWKPSDMPG 981

Query: 1181 LDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIV 1240
            +   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V
Sbjct: 982  IPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPV 1041

Query: 1241 PVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMS 1300
             V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++ 
Sbjct: 1042 LVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGRELLSFLDCYSGYHQIRLK 1101

Query: 1301 PEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSA 1360
              D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE YVDD++VK+ 
Sbjct: 1102 ESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTK 1161

Query: 1361 DEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREM 1420
             ++  +  L + F  +R ++++LNP KCTFGV SGKL+GF+VS +GI+ +P+KV AI  M
Sbjct: 1162 QKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLVGFMVSHRGIQANPEKVTAILNM 1221

Query: 1421 PAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYL 1480
              P T+K V+   G +  +SRF+S +     P FKLL+K     W  E Q+AF+  K  L
Sbjct: 1222 KPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLL 1281

Query: 1481 LEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETR 1536
             EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY++S+   D +TR
Sbjct: 1282 TEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTR 1341

Query: 1537 YTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYD 1596
            Y  ++K    +    ++L HY   H+  +++   P+  I       G+IA+W + L   D
Sbjct: 1342 YPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLD 1400

Query: 1597 IVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSK 1656
            I FK + +IK   LAD +A     ++   + D P E + +                    
Sbjct: 1401 ISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------------------- 1435

Query: 1657 WGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRI 1716
            W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA + G+  AI + I
Sbjct: 1436 WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGI 1495

Query: 1717 KHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADAL 1776
            K L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H+ R  N+ AD L
Sbjct: 1496 KRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRL 1555

Query: 1777 ATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY--RPWYYDIKQFLL 1834
            A   S   V   +DV +   + L  P+      D    AG + V      W   + +FL 
Sbjct: 1556 ANFGSKREVAP-SDVFV---EHLYTPT--VPHKDTTQVAGTHDVAMVETDWREPLIRFLT 1609

Query: 1835 SREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEHEAEQLVHDVHD 1891
            S+E P     QDK    R++ R   +++    LYK++   +L RCV   E  QL+ D+H 
Sbjct: 1610 SQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLQDIHS 1664

Query: 1892 GTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSP 1951
            G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L  +   
Sbjct: 1665 GICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLS 1724

Query: 1952 WPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICR 2011
            WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F   NI+ R
Sbjct: 1725 WPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHR 1782

Query: 2012 YGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRI 2066
            +GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I      R+
Sbjct: 1783 FGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARV 1842

Query: 2067 VQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEA 2126
              ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  SLR     
Sbjct: 1843 FDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---R 1899

Query: 2127 KLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPREFKVGELVLKRRI 2186
               E  + + R D L+ +EE R  A+ R   Y   ++   ++ V  R F VG+LVL++  
Sbjct: 1900 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK-- 1957

Query: 2187 SQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2239
             Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1958 IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2010



 Score = 53.5 bits (127), Expect = 7e-05
 Identities = 52/211 (24%), Positives = 96/211 (44%), Gaps = 16/211 (7%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 413 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 469

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 470 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 528

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P      +T+    E+A
Sbjct: 529 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKP-----PMTVKLMFEKA 582

Query: 333 VRDGIIVFEKAESSVNASKRYGNGHHKKKET 363
                  + KAE +V ASK+ G    + K T
Sbjct: 583 NE-----YAKAEDAVTASKQSGPSWKQNKGT 608



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 782 LRRTLIDGGSALNILFAKTLDDMQIPHSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 841

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 842 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 885


>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
          Length = 2012

 Score =  689 bits (1777), Expect = 0.0
 Identities = 400/1094 (36%), Positives = 587/1094 (53%), Gaps = 76/1094 (6%)

Query: 1169 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLM 1228
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 972  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1031

Query: 1229 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1288
             V +P+W+AN V V KK G+  MCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1032 EVLHPDWLANPVLVRKKTGQWLMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1091

Query: 1289 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1348
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1092 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1151

Query: 1349 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1408
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1152 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1211

Query: 1409 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1468
             +P+KV AI  M +P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1212 ANPEKVTAILNMKSPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDSFRWGPE 1271

Query: 1469 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1524
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1272 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1331

Query: 1525 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1584
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1332 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1390

Query: 1585 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEE 1644
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1391 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1437

Query: 1645 PLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1704
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1438 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1485

Query: 1705 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHH 1764
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H
Sbjct: 1486 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1545

Query: 1765 IPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFA---------IGDVIDQA 1815
            + R  N+ AD LA   S               +R   PS VF            D    A
Sbjct: 1546 VLRHNNEAADRLANFGS---------------KREAAPSDVFVEHLYSPTVPHKDATQAA 1590

Query: 1816 GENVVGY--RPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYD 1870
            G + V      W   + +FL S+E P     QDK    R++ R   ++L    LYK++  
Sbjct: 1591 GAHDVAMVEADWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVLHEAELYKKSPS 1645

Query: 1871 MVLLRCVDEHEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHK 1930
             +L RCV   E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  
Sbjct: 1646 GILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEG 1705

Query: 1931 CQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAA 1990
            CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA 
Sbjct: 1706 CQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAK 1764

Query: 1991 SYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRP 2050
                +T      F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P
Sbjct: 1765 PVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHP 1823

Query: 2051 QMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVY 2105
              NG VE AN  I      R+  ++      W + LP  L   RTT   +TG +PF LVY
Sbjct: 1824 MSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVY 1883

Query: 2106 GMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAA 2165
            G EA+LP EVE  SLR        E  + + R D L+ +EE R  A+ R   Y   ++  
Sbjct: 1884 GAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRY 1940

Query: 2166 FDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVEL 2225
             ++ V  R F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  +
Sbjct: 1941 HNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLV 1998

Query: 2226 PNPVNADIVKKYFA 2239
             N  N + +++++A
Sbjct: 1999 DNSWNIEHLRRFYA 2012



 Score = 53.9 bits (128), Expect = 6e-05
 Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 415 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 471

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 472 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 530

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 531 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 584

Query: 333 VRDGIIVFEKAESSVNASKRY----------------GNGHHKKKETEVGMVSAGAGQSM 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 585 NE-----YAKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSS 639

Query: 377 ATVAPINATQ--MPPSYPYMPYSQH 399
              + +N     M    P+ P S H
Sbjct: 640 RQRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 844 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]
          Length = 2026

 Score =  687 bits (1774), Expect = 0.0
 Identities = 399/1085 (36%), Positives = 589/1085 (53%), Gaps = 58/1085 (5%)

Query: 1169 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLM 1228
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1229 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1288
             V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1289 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1348
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1349 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1408
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1409 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1468
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1276

Query: 1469 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1524
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1525 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1584
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1395

Query: 1585 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEE 1644
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1645 PLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1704
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1705 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHH 1764
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1765 IPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY-- 1822
            + R  N+ AD LA   S   V   +DV +   + L  P+      D    AG + V    
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAP-SDVFV---EHLYTPT--VPHKDTTQVAGTHDVAMVE 1604

Query: 1823 RPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1879
              W   + +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV  
Sbjct: 1605 ADWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSL 1659

Query: 1880 HEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIH 1939
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1660 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1719

Query: 1940 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 1999
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1720 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADN 1778

Query: 2000 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2059
               F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE A
Sbjct: 1779 APDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDCCEDFGIKICYASVAHPMSNGQVERA 1837

Query: 2060 NKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2114
            N  I      R+  ++      W E LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1838 NGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1897

Query: 2115 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPRE 2174
            VE  SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R 
Sbjct: 1898 VEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 1954

Query: 2175 FKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2234
            F VG+LVL++   Q    R K +P +EGP+++      G+  L   DG  + N  N + +
Sbjct: 1955 FLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISAVTRPGSYRLKREDGTLVDNSWNIEHL 2012

Query: 2235 KKYFA 2239
            ++++A
Sbjct: 2013 RRFYA 2017



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 54/211 (25%), Positives = 95/211 (44%), Gaps = 16/211 (7%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     +   M +Y
Sbjct: 420 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANY 476

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  +F L ++ QK  ES 
Sbjct: 477 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQFDLYNVVQKSGESL 535

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 536 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 589

Query: 333 VRDGIIVFEKAESSVNASKRYGNGHHKKKET 363
                  + KAE +V ASK+ G     KK+T
Sbjct: 590 NE-----YAKAEDAVTASKQSGPSWKPKKDT 615



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]
          Length = 2017

 Score =  687 bits (1772), Expect = 0.0
 Identities = 399/1085 (36%), Positives = 588/1085 (53%), Gaps = 58/1085 (5%)

Query: 1169 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLM 1228
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1229 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1288
             V +P+W+AN V V KK G+ RMCVD+ DLNK  PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1289 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1348
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1349 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1408
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1409 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1468
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFHWGPE 1276

Query: 1469 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1524
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEDGHVQKVQRPIY 1336

Query: 1525 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1584
            ++S+   D +TRY  ++K    +    ++L HY   H   +++   P+  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHLVTVVTSF-PLGDILHNREANGR 1395

Query: 1585 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEE 1644
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKVEH-------- 1442

Query: 1645 PLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1704
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1705 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHH 1764
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1765 IPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY-- 1822
            + R  N+ AD LA   S   V   +DV +   + L  P+      D    AG + V    
Sbjct: 1551 VLRHNNKAADRLANFGSKREVAP-SDVFV---EHLYAPT--VPHKDTTQVAGTHDVAMVE 1604

Query: 1823 RPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1879
              W   + +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV  
Sbjct: 1605 ADWREPLIRFLTSQELP-----QDKDEAERISRRSRLYVMHEAELYKKSPSGILQRCVSL 1659

Query: 1880 HEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIH 1939
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1660 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1719

Query: 1940 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 1999
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1720 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAFGGYTHLFVAIDKFSKWIEAKPVVTITADN 1778

Query: 2000 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2059
               F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE A
Sbjct: 1779 ARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERA 1837

Query: 2060 NKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2114
            N  I      R+  ++      W E LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1838 NGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1897

Query: 2115 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPRE 2174
            VE  SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R 
Sbjct: 1898 VEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 1954

Query: 2175 FKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2234
            F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +
Sbjct: 1955 FLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLIDNSWNIEHL 2012

Query: 2235 KKYFA 2239
            ++++A
Sbjct: 2013 RRFYA 2017



 Score = 52.8 bits (125), Expect = 1e-04
 Identities = 52/211 (24%), Positives = 93/211 (43%), Gaps = 16/211 (7%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     +   M +Y
Sbjct: 420 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANY 476

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 477 LPVALADSARSWLHGLPRGTIESWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 535

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 536 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 589

Query: 333 VRDGIIVFEKAESSVNASKRYGNGHHKKKET 363
                  + KAE +V ASK+ G      K T
Sbjct: 590 NE-----YAKAEDAVTASKQSGPSWKPNKGT 615



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]
          Length = 1950

 Score =  686 bits (1770), Expect = 0.0
 Identities = 400/1085 (36%), Positives = 587/1085 (53%), Gaps = 58/1085 (5%)

Query: 1169 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLM 1228
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 910  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 969

Query: 1229 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1288
             V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 970  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1029

Query: 1289 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1348
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1030 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1089

Query: 1349 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1408
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1090 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1149

Query: 1409 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1468
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1150 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPE 1209

Query: 1469 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1524
             Q+AF+  K  L EPPIL  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1210 AQKAFEDFKKLLTEPPILASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1269

Query: 1525 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1584
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1270 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1328

Query: 1585 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEE 1644
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1329 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1375

Query: 1645 PLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1704
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1376 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1423

Query: 1705 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHH 1764
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H
Sbjct: 1424 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1483

Query: 1765 IPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY-- 1822
            + R  N+ AD LA   S  R    +DV +   + L  P+      D    A  + V    
Sbjct: 1484 VLRHNNEAADRLANFGSK-REMAPSDVFV---EHLYTPT--VPHKDTTQDADTHDVALVE 1537

Query: 1823 RPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1879
              W     +FL S+E P     QDK    R++ R   + +    LYK++   +L RCV  
Sbjct: 1538 ADWREPFIRFLTSQELP-----QDKDEAERISRRSKLYAMHEAELYKKSPSGILQRCVSL 1592

Query: 1880 HEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIH 1939
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1593 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1652

Query: 1940 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 1999
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1653 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADN 1711

Query: 2000 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2059
               F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE A
Sbjct: 1712 ARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERA 1770

Query: 2060 NKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2114
            N  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1771 NGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1830

Query: 2115 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPRE 2174
            VE  SLR        E  + + R D L+ +EE R  A+ R   Y   ++   ++ V  R 
Sbjct: 1831 VEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRA 1887

Query: 2175 FKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2234
            F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +
Sbjct: 1888 FLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHL 1945

Query: 2235 KKYFA 2239
            ++++A
Sbjct: 1946 RRFYA 1950



 Score = 53.9 bits (128), Expect = 6e-05
 Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 353 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 409

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 410 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 468

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 469 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 522

Query: 333 VRDGIIVFEKAESSVNASKRY----------------GNGHHKKKETEVGMVSAGAGQSM 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 523 NE-----YTKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSS 577

Query: 377 ATVAPINATQ--MPPSYPYMPYSQH 399
              + +N     M    P+ P S H
Sbjct: 578 RQRSRVNTFDKIMNSQCPHHPNSNH 602



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 722 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 781

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 782 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 825


>UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa]
          Length = 2017

 Score =  686 bits (1769), Expect = 0.0
 Identities = 406/1114 (36%), Positives = 598/1114 (53%), Gaps = 65/1114 (5%)

Query: 1147 KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPGLDPMIVEHRIPTKPECPPV 1199
            KI  + E   K K I L    P       DIFAW   DMPG+   ++EH +  K +  P+
Sbjct: 948  KISKSGESEAKTKKIPLDPSDPTKTANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPI 1007

Query: 1200 RQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLN 1259
            +Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLN
Sbjct: 1008 KQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN 1067

Query: 1260 KASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYK 1319
            K+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY 
Sbjct: 1068 KSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYV 1127

Query: 1320 VMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKY 1379
             MPFGL NAGATYQR +   F   I + VE YVDD++VK+  ++  +  L + F  +R +
Sbjct: 1128 TMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLILDLEETFASIRAF 1187

Query: 1380 KLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYI 1439
            +++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +
Sbjct: 1188 RMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAAL 1247

Query: 1440 SRFISHMTATCGPIFKLLRKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYL 1499
            SRF+S +     P FKLL+K     W  E Q+AF+  K  L EPP+L  P    PL++Y+
Sbjct: 1248 SRFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYV 1307

Query: 1500 AVFDESMGCVLG-QQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLR 1555
            +   + +  VL  +++E G   K +  IY++S+   D +TRY  ++K    +    ++L 
Sbjct: 1308 SATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLS 1367

Query: 1556 HYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1615
            HY   H+  +++   P+  I       G+IA+W + L   D+ FK + +IK   LAD +A
Sbjct: 1368 HYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLDLSFKPRISIKSQALADFVA 1426

Query: 1616 YQPLDDYQLIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGMGAV 1675
                                  +  +C+E    +  +    W + FDG+    G G G V
Sbjct: 1427 ----------------------EWTECQEDTTVKKME---HWTMHFDGSKRLSGTGAGVV 1461

Query: 1676 IVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGE 1735
            ++SP G  + +   I F  ++N+AEYEA + G+  AI + IK L + GDS LV+NQ+  E
Sbjct: 1462 LISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKE 1521

Query: 1736 WETHHAKLIPYHDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIK 1795
            W      +  Y    R+L   F  +EL H+ R +N+ AD LA   S   V   +DV +  
Sbjct: 1522 WSCLDDNMKAYRQEVRKLEDKFDGLELSHVLRHDNEAADRLANFGSKREVAP-SDVFV-- 1578

Query: 1796 GQRLERPSHVFAIGDVIDQAGENVVGY--RPWYYDIKQFLLSREYPPGASKQDKKTLRRL 1853
             + L  P+      D    AG + V      W   + +FL S+E P     QDK    R+
Sbjct: 1579 -EHLYTPT--VPHKDTTQAAGIHDVAMVETDWREPLIRFLTSQELP-----QDKDEAERI 1630

Query: 1854 AGR---FLLDGDILYKRNYDMVLLRCVDEHEAEQLVHDVHDGTFGTHATGHTMSRKLLRA 1910
            + R   +++    LYK++   +L RCV   E  QL+ D+H G  G HA   T+  K  R 
Sbjct: 1631 SRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQ 1690

Query: 1911 GYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKAS 1970
            G++W     D  +  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA 
Sbjct: 1691 GFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAV 1749

Query: 1971 NGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNV 2030
             G+  + VAID F+KW+EA     +T      F   NI+ R+GVP++IITDNGT     V
Sbjct: 1750 GGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGV 1808

Query: 2031 VQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYAL 2085
             +  CE+F I+   +S   P  NG VE AN  I      R+  ++      W + LP  L
Sbjct: 1809 FKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVL 1868

Query: 2086 HGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIE 2145
               RTT   +TG +PF LVYG EA+LP EVE  SLR        E  + + R D L+ +E
Sbjct: 1869 WSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLE 1925

Query: 2146 EKRMDAMARGHSYQARMKAAFDKKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYV 2205
            E R  A+ R   Y   ++   ++ V  R F VG+LVL++   Q    R K +P +EGP++
Sbjct: 1926 EVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFI 1983

Query: 2206 VKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2239
            + +    G+  L   DG  + N  N + +++++A
Sbjct: 1984 ISEVTRPGSYRLKREDGTLVDNSWNIEYLRRFYA 2017



 Score = 53.9 bits (128), Expect = 6e-05
 Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 420 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 476

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 477 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 535

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 536 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 589

Query: 333 VRDGIIVFEKAESSVNASKRY----------------GNGHHKKKETEVGMVSAGAGQSM 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 590 NE-----YAKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSS 644

Query: 377 ATVAPINATQ--MPPSYPYMPYSQH 399
              + +N     M    P+ P S H
Sbjct: 645 RQRSRVNTFDKIMNSQCPHHPNSNH 669



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
          Length = 1756

 Score =  684 bits (1764), Expect = 0.0
 Identities = 397/1085 (36%), Positives = 588/1085 (53%), Gaps = 58/1085 (5%)

Query: 1169 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLM 1228
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 716  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFVQDRKDAIKEELTKLLAAGFIK 775

Query: 1229 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1288
             V +P+W+AN V V KK G+ RMCVD+ DLNK  PKD F LP ID +VD+TA  ++ SF+
Sbjct: 776  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 835

Query: 1289 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1348
            D +SGY+QI++   D  KTSFITP G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 836  DCYSGYHQIRLKESDCLKTSFITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 895

Query: 1349 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1408
            E YVDD+++K+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 896  EAYVDDVVIKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 955

Query: 1409 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1468
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 956  ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1015

Query: 1469 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1524
             Q+AF+  K +L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1016 AQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1075

Query: 1525 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1584
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1076 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1134

Query: 1585 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEE 1644
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1135 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1181

Query: 1645 PLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1704
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1182 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1229

Query: 1705 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHH 1764
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H
Sbjct: 1230 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1289

Query: 1765 IPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY-- 1822
            + R  N+ AD LA   S   V   +DV +   + L  P+      D    AG + V    
Sbjct: 1290 VLRHNNEAADRLANFGSKREVAP-SDVFV---EHLYTPT--VPHKDTTQIAGTHDVALVE 1343

Query: 1823 RPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1879
              W     +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV  
Sbjct: 1344 ADWREPFIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSL 1398

Query: 1880 HEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIH 1939
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1399 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1458

Query: 1940 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 1999
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1459 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADN 1517

Query: 2000 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2059
               F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE A
Sbjct: 1518 ARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERA 1576

Query: 2060 NKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2114
            N  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1577 NGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1636

Query: 2115 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPRE 2174
            VE  SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R 
Sbjct: 1637 VEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 1693

Query: 2175 FKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2234
            F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +
Sbjct: 1694 FLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHL 1751

Query: 2235 KKYFA 2239
            ++++A
Sbjct: 1752 RRFYA 1756



 Score = 48.9 bits (115), Expect = 0.002
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 528 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 587

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 945
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K     +++++  +
Sbjct: 588 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRRVLSLRSD 644



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 13/204 (6%)

Query: 161 QDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLME 220
           QD    + V     FK    +KY+G T P++ +  Y   +     +   M +Y   +L +
Sbjct: 163 QDPIAGAGVTTSAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALAD 222

Query: 221 DAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESFREYAQRW 279
            A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES R+Y +R+
Sbjct: 223 SARSWLHGLPRGTIRSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYIRRF 281

Query: 280 RGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIV 339
                +I+   D + +   F K ++ + +       P       T+    E+A       
Sbjct: 282 SEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKANE----- 330

Query: 340 FEKAESSVNASKRYGNGHHKKKET 363
           + KAE +V ASK+ G      K T
Sbjct: 331 YAKAEDAVTASKQSGPSWKPNKGT 354


>UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]
          Length = 2008

 Score =  679 bits (1752), Expect = 0.0
 Identities = 397/1092 (36%), Positives = 587/1092 (53%), Gaps = 68/1092 (6%)

Query: 1160 IIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQ 1219
            +I  L+   DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ 
Sbjct: 973  LITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELT 1032

Query: 1220 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1279
            K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+T
Sbjct: 1033 KLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDST 1092

Query: 1280 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1339
            A  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   
Sbjct: 1093 AGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRC 1152

Query: 1340 FHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1399
            F   I + VE YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLG
Sbjct: 1153 FSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEKCTFGVPSGKLLG 1212

Query: 1400 FIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1459
            F+VS +GI+ +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K
Sbjct: 1213 FMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKK 1272

Query: 1460 NQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLG-QQDETG- 1517
                 W  E Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G 
Sbjct: 1273 TDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLAVEREEEGH 1332

Query: 1518 --KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYI 1575
              K +  IY++S+   D +TRY  ++K               L  H+  +++   P+  I
Sbjct: 1333 VQKVQRPIYFVSEVLADSKTRYPQVQK--------------LLYGHSVTVVTSF-PLGDI 1377

Query: 1576 FEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIM 1635
                   G+IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + 
Sbjct: 1378 LHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENME 1432

Query: 1636 YLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECT 1695
            +                    W + FDG+    G G G V++SP G  + +   I F  +
Sbjct: 1433 H--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSAS 1472

Query: 1696 NNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLT 1755
            +N+AEYEA + G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L  
Sbjct: 1473 HNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLED 1532

Query: 1756 YFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQA 1815
             F  +EL H+ R  N+ AD LA   S   V   +DV +   + L  P+        +   
Sbjct: 1533 KFDGLELSHVLRHNNEAADRLANFGSKREVAP-SDVFV---EHLYTPTVPHKDTTQVAGT 1588

Query: 1816 GENVVGYRPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMV 1872
             +  V    W   + +FL S+E P     QDK    R++ R   +++    LYK++   +
Sbjct: 1589 HDVAVVETDWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGI 1643

Query: 1873 LLRCVDEHEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQ 1932
            L RCV   E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ
Sbjct: 1644 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1703

Query: 1933 IYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 1992
             +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA   
Sbjct: 1704 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 1762

Query: 1993 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 2052
              +T      F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  
Sbjct: 1763 VTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMS 1821

Query: 2053 NGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 2107
            NG VE AN  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG 
Sbjct: 1822 NGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGA 1881

Query: 2108 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFD 2167
            EA+LP EVE  SLR        E  + + R D L+ +EE R  A+ R   Y   ++   +
Sbjct: 1882 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHN 1938

Query: 2168 KKVNPREFKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 2227
            + V  R F VG+LVL++   Q    R K +P +EGP+++ +    G+  L   DG  + N
Sbjct: 1939 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 1996

Query: 2228 PVNADIVKKYFA 2239
              N + +++++A
Sbjct: 1997 SWNIEHLRRFYA 2008



 Score = 52.0 bits (123), Expect = 2e-04
 Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 31/251 (12%)

Query: 168 KVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLMEDAAEWYT 227
           +VD P  FK    +KY+G T P + +  Y   +     ++  M +Y   +L + A  W  
Sbjct: 427 RVDWPAGFKPTGIEKYDGTTNPGSWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLH 486

Query: 228 SLSKDDVHTFDELAAAFKSHYGFNTRLKPNREF-LRSLSQKKEESFREYAQRWRGAAARI 286
            L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES R+Y +R+     +I
Sbjct: 487 GLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKI 545

Query: 287 TPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 346
           +   D + +   F K ++ + +       P       T+    E+A       + KAE +
Sbjct: 546 SDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKANE-----YAKAEDA 594

Query: 347 VNASKRY----------------GNGHHKKKETEVGMVSAGAGQSMATVAPINATQ--MP 388
           V ASK+                 G+ +HK ++ +   + A A  S    + +N     M 
Sbjct: 595 VTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMN 654

Query: 389 PSYPYMPYSQH 399
              P+ P S H
Sbjct: 655 SQCPHHPNSNH 665



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 785 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 845 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q93Y89 Gag-pol [Oryza sativa]
          Length = 2017

 Score =  676 bits (1745), Expect = 0.0
 Identities = 394/1085 (36%), Positives = 587/1085 (53%), Gaps = 58/1085 (5%)

Query: 1169 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLM 1228
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLYVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1229 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1288
             V +P+W+AN V V KK G+ RMCVD+ DLN + PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNISCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1289 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1348
            D + GY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYLGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1349 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1408
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1409 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPIVWNDE 1468
             +P+K+ AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1217 ANPEKITAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPD 1276

Query: 1469 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1524
             Q+AF+  K  L EPP+L  P    PL++Y+A   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYIAAASQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1525 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1584
            ++S+   D +TRY  ++K    +    ++L HY  +H+  +++    +  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQSHSVTVVTSFS-LGDILHNREANGR 1395

Query: 1585 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQLIEFDFPDEEIMYLKSKDCEE 1644
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1645 PLINEGPDPNSKWGLVFDGAVNAYGKGMGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1704
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1705 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYHDYARRLLTYFTKVELHH 1764
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ Y    R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1765 IPRDENQMADALATLSSMFRVNHWNDVPIIKGQRLERPSHVFAIGDVIDQAGENVVGY-- 1822
            + R  N+ AD LA   S   V   +DV +   + L  P+      D    AG + V    
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAP-SDVFV---EHLYTPT--VPHKDTTQIAGTHDVALVE 1604

Query: 1823 RPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1879
              W   + +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV  
Sbjct: 1605 ADWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSL 1659

Query: 1880 HEAEQLVHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIH 1939
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1660 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1719

Query: 1940 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 1999
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1720 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADN 1778

Query: 2000 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2059
               F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE A
Sbjct: 1779 ARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERA 1837

Query: 2060 NKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2114
            N  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1838 NGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1897

Query: 2115 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGHSYQARMKAAFDKKVNPRE 2174
            VE  SLR        E  + + R D L+ +EE R  A+ +   Y   ++   ++ V  R 
Sbjct: 1898 VEFESLRF---RNYREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 1954

Query: 2175 FKVGELVLKRRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2234
            F VG+LVL++   Q    R K +P +EGP+++      G+  L   DG  + N  N + +
Sbjct: 1955 FLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISDVTRPGSYRLKREDGTLVDNSWNIEHL 2012

Query: 2235 KKYFA 2239
            ++++A
Sbjct: 2013 RRFYA 2017



 Score = 50.4 bits (119), Expect = 6e-04
 Identities = 50/210 (23%), Positives = 89/210 (41%), Gaps = 14/210 (6%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     +   M +Y
Sbjct: 420 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTIYGLAIRAAGGDSKAMANY 476

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFR 273
              +L + A  W   L +  + ++ EL   F +++         +  L ++ QK  ES R
Sbjct: 477 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFEHPGTQYDLYNVIQKSGESLR 536

Query: 274 EYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAV 333
           +Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A 
Sbjct: 537 DYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPK-----TVKLMFEKAN 590

Query: 334 RDGIIVFEKAESSVNASKRYGNGHHKKKET 363
                 + KAE +V ASK+ G      K T
Sbjct: 591 E-----YAKAEDAVTASKQSGPSWKPNKGT 615



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 834 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 892
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 893 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 932
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVDDFETAYHAILGRPALAKFMAVPHYTYMMMK 892


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.318    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,870,843,673
Number of Sequences: 2790947
Number of extensions: 174252092
Number of successful extensions: 583400
Number of sequences better than 10.0: 29819
Number of HSP's better than 10.0 without gapping: 4678
Number of HSP's successfully gapped in prelim test: 25189
Number of HSP's that attempted gapping in prelim test: 556156
Number of HSP's gapped (non-prelim): 39444
length of query: 2239
length of database: 848,049,833
effective HSP length: 143
effective length of query: 2096
effective length of database: 448,944,412
effective search space: 940987487552
effective search space used: 940987487552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)