BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122169.6 + phase: 0
(622 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q5YLB4 DNA gyrase B subunit [Nicotiana benthamiana] 1085 0.0
UniRef100_Q94BZ7 AT3g10270/F14P13_13 [Arabidopsis thaliana] 1049 0.0
UniRef100_Q9SS38 Putative DNA gyrase subunit B [Arabidopsis thal... 1035 0.0
UniRef100_Q9FYE7 DNA gyrase subunit B-like protein [Arabidopsis ... 1033 0.0
UniRef100_Q9SDC3 Similar to DNA gyrase subunit B [Oryza sativa] 997 0.0
UniRef100_Q8GIT7 DNA gyrase subunit B [Synechococcus sp.] 778 0.0
UniRef100_Q7V9N3 DNA gyrase B subunit [Prochlorococcus marinus] 773 0.0
UniRef100_Q8YLN3 DNA gyrase B subunit [Anabaena sp.] 773 0.0
UniRef100_Q7UA07 DNA gyrase subunit B [Synechococcus sp.] 759 0.0
UniRef100_Q8DL50 DNA gyrase subunit B [Synechococcus elongatus] 758 0.0
UniRef100_Q7V940 DNA gyrase, subunit B precursor [Prochlorococcu... 754 0.0
UniRef100_UPI000030137C UPI000030137C UniRef100 entry 746 0.0
UniRef100_Q7UZM4 DNA gyrase, subunit B precursor [Prochlorococcu... 739 0.0
UniRef100_Q7NHM9 DNA gyrase subunit B [Gloeobacter violaceus] 732 0.0
UniRef100_UPI000031EA9D UPI000031EA9D UniRef100 entry 694 0.0
UniRef100_Q8RSD5 DNA gyrase subunit B [Plectonema boryanum] 684 0.0
UniRef100_Q8RSD3 DNA gyrase subunit B [Synechococcus sp] 680 0.0
UniRef100_Q98RQ4 DNA gyrase subunit B [Guillardia theta] 647 0.0
UniRef100_Q8GE20 DNA gyrase subunit B [Heliobacillus mobilis] 637 0.0
UniRef100_O50627 DNA gyrase subunit B [Bacillus halodurans] 630 e-179
>UniRef100_Q5YLB4 DNA gyrase B subunit [Nicotiana benthamiana]
Length = 731
Score = 1085 bits (2805), Expect = 0.0
Identities = 530/622 (85%), Positives = 590/622 (94%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAGFA+KIDVVLHAD+SVSIADNGRGIPT++HP
Sbjct: 110 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPV 169
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
TKKS+LETVLT+LHAGGKFGG +SGY+VSGGLHGVGLSVVNALS+ALEVT+WR+G EY Q
Sbjct: 170 TKKSSLETVLTVLHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQ 229
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
YSRGKP+TTL C LP E +DRQGT I+FWPDKEVFTT ++F+YNTIAGRIRELAFLNP
Sbjct: 230 KYSRGKPITTLICHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNP 289
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRKEIDGITVDIAL 240
+LTIAL+KED DPEK+Q NEYFYAGGL EYV++LN DKK +HDVL FRKE DGIT+D+AL
Sbjct: 290 ELTIALKKEDIDPEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMAL 349
Query: 241 QWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHV 300
QWC DAYSDT+LGYANSIRT+DGGTHIDG+KA+LTR LN+LGKKSK IKEKDI+LSGEHV
Sbjct: 350 QWCSDAYSDTMLGYANSIRTIDGGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHV 409
Query: 301 REGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKA 360
REGLTCV+SVKVPNPEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+
Sbjct: 410 REGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 469
Query: 361 LNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQG 420
LNA KAALAAKRARELVRQKSVL+SSSLPGKLADCS++NPE+ EIFIVEGDSAGGSAKQG
Sbjct: 470 LNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQG 529
Query: 421 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIII 480
RDRRFQAILPLRGKILNIER+DEAAMYKNEEIQNLILGLGLGVKGEDFKK+ALRYHKIII
Sbjct: 530 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII 589
Query: 481 LTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKL 540
LTDADVDGAHIRTLLLTFF+RYQRALF+EG IYVGVPPLYKV RGKQV+YCYD+A+LKK+
Sbjct: 590 LTDADVDGAHIRTLLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKV 649
Query: 541 KSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGAR 600
+ SF NASYN+QRFKGLGEMMP QLWETTM+PE RLLK+L VEDAAEAN+VFSSLMG+R
Sbjct: 650 QRSFPSNASYNIQRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSR 709
Query: 601 VDVRKELIQNAANMIDLDQLDI 622
VD+RK+LIQN+A+M++L+QLDI
Sbjct: 710 VDIRKQLIQNSASMMNLEQLDI 731
>UniRef100_Q94BZ7 AT3g10270/F14P13_13 [Arabidopsis thaliana]
Length = 732
Score = 1049 bits (2712), Expect = 0.0
Identities = 510/622 (81%), Positives = 576/622 (91%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+ASK+DVVLHAD SVS+ DNGRGIPTD+HP
Sbjct: 111 MYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPA 170
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
TKKS+LETVLT+LHAGGKFGG +SGYSVSGGLHGVGLSVVNALSEALEV+VWR+G+E+ Q
Sbjct: 171 TKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQ 230
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
YSRGKP+TTL C +LP E+K +GT I+FWPDKEVFTTAIEF++NTIAGRIRELAFLNP
Sbjct: 231 NYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNP 290
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRKEIDGITVDIAL 240
K+TI+L+KED+DPEK Q +EY +AGGL EYV +LNTDK +HDVL FR+EI+G TVD+AL
Sbjct: 291 KVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVAL 350
Query: 241 QWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHV 300
QWC DAYSDT+LGYANSIRT+DGGTHI+G+KASLTRTLN+L KKSK +KEKDI+LSGEHV
Sbjct: 351 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSGEHV 410
Query: 301 REGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKA 360
REGLTC+VSVKVPNPEFEGQTKTRLGNPEVRK+VDQS+QEYLTE+LELHPD+L+S++SK+
Sbjct: 411 REGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESIISKS 470
Query: 361 LNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQG 420
LNA+KAALAAKRARELVR KSVL+SSSLPGKLADCSS++PE EIFIVEGDSAGGSAKQG
Sbjct: 471 LNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQG 530
Query: 421 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIII 480
RDRRFQAILPLRGKILNIER+DEAAMYKNEEIQNLILGLGLGVKGEDFKK+ LRYHKIII
Sbjct: 531 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIII 590
Query: 481 LTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKL 540
LTDADVDGAHIRTLLLTFF+RYQRALFD G IYVGVPPL+KV RGK YCYD+ADLKK+
Sbjct: 591 LTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKI 650
Query: 541 KSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGAR 600
S+F NASYN+QRFKGLGEMMP QLWETTM+PE R+LK+L V+D AEAN+ FSSLMGAR
Sbjct: 651 TSNFPANASYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGAR 710
Query: 601 VDVRKELIQNAANMIDLDQLDI 622
VDVRKELI+NAA I+L +LDI
Sbjct: 711 VDVRKELIKNAATRINLQRLDI 732
>UniRef100_Q9SS38 Putative DNA gyrase subunit B [Arabidopsis thaliana]
Length = 657
Score = 1035 bits (2676), Expect = 0.0
Identities = 512/625 (81%), Positives = 577/625 (91%), Gaps = 3/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTG RGLHHLVYEILDNA+DEAQAGFASKIDVVLH+DDSVSI+DNGRGIPTD+HP
Sbjct: 33 MYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPA 92
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KS+LETVLT+LHAGGKFGG +SGYSVSGGLHGVGLSVVNALSEALEV V R+G+E+ Q
Sbjct: 93 TGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQ 152
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKE---VFTTAIEFEYNTIAGRIRELAF 177
YSRGKPVTTL C +LP E++ QGT I+FWPDKE +FTTAI+F++NTIAGRIRELAF
Sbjct: 153 KYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEGFALFTTAIQFDHNTIAGRIRELAF 212
Query: 178 LNPKLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRKEIDGITVD 237
LNPK+TI+L+KED+DPE+ +EYFYAGGL EYV +LNTDKK +HDVL FRKEI+G TVD
Sbjct: 213 LNPKVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVD 272
Query: 238 IALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSG 297
++LQWC DAYSDT+LGYANSIRT+DGGTHI+G+KASLTRTLNSL KK KVIKEKDI+LSG
Sbjct: 273 VSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSG 332
Query: 298 EHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVL 357
EHVREGLTC+VSVKVPNPEFEGQTKTRLGNPEVRK+VDQS+QEYLTEYLELHPDVL+S++
Sbjct: 333 EHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESII 392
Query: 358 SKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSA 417
SK+LNA+KAALAAKRARELVR KSVL+SSSLPGKLADCSS++P + EIFIVEGDSAGGSA
Sbjct: 393 SKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSA 452
Query: 418 KQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHK 477
KQGRDRRFQAILPLRGKILNIER+DEAAMYKNEEIQNLILGLGLGVKGEDF K+ LRYHK
Sbjct: 453 KQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHK 512
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADL 537
IIILTDADVDGAHIRTLLLTFF+RYQRALFD G IYVGVPPL+KV RGKQ HYCYD+A L
Sbjct: 513 IIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAAL 572
Query: 538 KKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLM 597
KK+ +SF NASYN+QRFKGLGEMMP QLWETTM+P+ R+LK+L V+DAAE N+VFSSLM
Sbjct: 573 KKITASFPGNASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLM 632
Query: 598 GARVDVRKELIQNAANMIDLDQLDI 622
GARVDVRKELI++AA ++L+ LDI
Sbjct: 633 GARVDVRKELIKSAATRMNLENLDI 657
>UniRef100_Q9FYE7 DNA gyrase subunit B-like protein [Arabidopsis thaliana]
Length = 760
Score = 1033 bits (2671), Expect = 0.0
Identities = 510/652 (78%), Positives = 576/652 (88%), Gaps = 30/652 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+ASK+DVVLHAD SVS+ DNGRGIPTD+HP
Sbjct: 109 MYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPA 168
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
TKKS+LETVLT+LHAGGKFGG +SGYSVSGGLHGVGLSVVNALSEALEV+VWR+G+E+ Q
Sbjct: 169 TKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQ 228
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKE------------------------- 155
YSRGKP+TTL C +LP E+K +GT I+FWPDKE
Sbjct: 229 NYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEGFACFPLLTTLPKPKLDLMINFPLW 288
Query: 156 -----VFTTAIEFEYNTIAGRIRELAFLNPKLTIALRKEDNDPEKVQSNEYFYAGGLAEY 210
VFTTAIEF++NTIAGRIRELAFLNPK+TI+L+KED+DPEK Q +EY +AGGL EY
Sbjct: 289 NELFSVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKEDDDPEKTQYSEYSFAGGLTEY 348
Query: 211 VQFLNTDKKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTILGYANSIRTVDGGTHIDGM 270
V +LNTDK +HDVL FR+EI+G TVD+ALQWC DAYSDT+LGYANSIRT+DGGTHI+G+
Sbjct: 349 VSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 408
Query: 271 KASLTRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEV 330
KASLTRTLN+L KKSK +KEKDI+LSGEHVREGLTC+VSVKVPNPEFEGQTKTRLGNPEV
Sbjct: 409 KASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEV 468
Query: 331 RKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARELVRQKSVLRSSSLPG 390
RK+VDQS+QEYLTE+LELHPD+L+S++SK+LNA+KAALAAKRARELVR KSVL+SSSLPG
Sbjct: 469 RKIVDQSVQEYLTEFLELHPDILESIISKSLNAYKAALAAKRARELVRSKSVLKSSSLPG 528
Query: 391 KLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNE 450
KLADCSS++PE EIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIER+DEAAMYKNE
Sbjct: 529 KLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKNE 588
Query: 451 EIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEG 510
EIQNLILGLGLGVKGEDFKK+ LRYHKIIILTDADVDGAHIRTLLLTFF+RYQRALFD G
Sbjct: 589 EIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDAG 648
Query: 511 YIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETT 570
IYVGVPPL+KV RGK YCYD+ADLKK+ S+F NASYN+QRFKGLGEMMP QLWETT
Sbjct: 649 CIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQLWETT 708
Query: 571 MDPEQRLLKKLTVEDAAEANIVFSSLMGARVDVRKELIQNAANMIDLDQLDI 622
M+PE R+LK+L V+D AEAN+ FSSLMGARVDVRKELI+NAA I+L +LDI
Sbjct: 709 MNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRLDI 760
>UniRef100_Q9SDC3 Similar to DNA gyrase subunit B [Oryza sativa]
Length = 647
Score = 997 bits (2578), Expect = 0.0
Identities = 485/622 (77%), Positives = 564/622 (89%), Gaps = 4/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTG RGLHHLVYEILDNAVDEAQAG+A+K+DV+LH D+SVS+ DNGRGIPTD+HP
Sbjct: 30 MYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQ 89
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
TKKS +ETVLT++HAGGKFGG SGY+VSGGLHGVGLSVVNALSEALEVTVWR+G EY Q
Sbjct: 90 TKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQ 149
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
YSRGK +T L L E+ RQGTRI+FWPDK +FTT ++F++NTIAGRIRELAFLNP
Sbjct: 150 NYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNP 209
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRKEIDGITVDIAL 240
+LTIAL KE++D + VQ NEY YAGGL EYV++LNTDKK++HD ++FRKE+DGITVD++L
Sbjct: 210 ELTIALTKEEDDLQ-VQHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSL 268
Query: 241 QWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHV 300
QWC D+YSDT+LGYANSIRT+DGGTHIDG+K SLTRT+N+ KKSK +K+KDI+LSGEHV
Sbjct: 269 QWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHV 328
Query: 301 REGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKA 360
REG+TC+++VKVPNPEFEGQTKTRLGNPEVR++V+QS+QE LTEYLELHPDVLDS+LSK+
Sbjct: 329 REGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKS 388
Query: 361 LNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQG 420
LNA KAALAAKRARELVR KSVL+SSSLPGKLADC+SS+PE+ EIFIVEGDSAGG +
Sbjct: 389 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGIYLR- 447
Query: 421 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIII 480
+ QAILPLRGKILNIERRDEAA+YKNEEIQNLI+ LGLGVKGEDF K+ALRYHKI+I
Sbjct: 448 --KWMQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVI 505
Query: 481 LTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKL 540
LTDADVDGAHIRTLLLTFF+RYQ+ALFDEG IYVGVPPLYKV RGKQ HYCYD+ADLK+L
Sbjct: 506 LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEL 565
Query: 541 KSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGAR 600
++F NASY++QRFKGLGEMMP QLWETTMDPE+R+LK+L VEDAAEAN+VFSSLMG R
Sbjct: 566 VNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTR 625
Query: 601 VDVRKELIQNAANMIDLDQLDI 622
VDVRK+LIQNAA+M++L+ LDI
Sbjct: 626 VDVRKQLIQNAASMVNLEHLDI 647
>UniRef100_Q8GIT7 DNA gyrase subunit B [Synechococcus sp.]
Length = 645
Score = 778 bits (2008), Expect = 0.0
Identities = 387/629 (61%), Positives = 486/629 (76%), Gaps = 15/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGP+GLHHLVYE++DNAVDEA AG+ + IDV L D S + DNGRGIPTD+HP
Sbjct: 25 MYIGSTGPKGLHHLVYEVVDNAVDEALAGYCNTIDVRLLEDGSCQVTDNGRGIPTDIHPQ 84
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KSALETVLTILHAGGKFGG GY VSGGLHGVG+SVVNALSE +EVTVWREG + Q
Sbjct: 85 TGKSALETVLTILHAGGKFGG--GGYKVSGGLHGVGVSVVNALSEYVEVTVWREGKTHQQ 142
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ +G P+ L + DR+GT+++F PD +F+ EF+Y T+A R++ELA+LN
Sbjct: 143 RFEQGNPIGELQVAP---DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNA 199
Query: 181 KLTIALRKE------DNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSF-RKEIDG 233
+ I E +++P + Y++ GG+ EYV ++NTDK+A+H + F + E DG
Sbjct: 200 GVRIDFTDERLQLTKNHEPHQ---ETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDG 256
Query: 234 ITVDIALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDI 293
+ V+ ALQWC DAYSD ILG+AN+IRT+DGGTHI+G+K LTRT+N++ +K K+ D
Sbjct: 257 VQVEAALQWCVDAYSDNILGFANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADN 316
Query: 294 TLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVL 353
LSGE++REGLT +VSVKVP+PEFEGQTKT+LGN EVR +VD + E LTEYLE HP V
Sbjct: 317 NLSGENIREGLTAIVSVKVPDPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVA 376
Query: 354 DSVLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSA 413
D +L KA+ AF AA AA+RARELVR+KSVL SS+LPGKLADCSS +P + EIFIVEGDSA
Sbjct: 377 DLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSA 436
Query: 414 GGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDAL 473
GGSAKQGRDRRFQAILPLRGKILNIE+ D+A +YKN EIQ LI LGLG+KGE+F L
Sbjct: 437 GGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDASQL 496
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYD 533
RYH+I+I+TDADVDGAHIRTLLLTFFYRYQR+L ++GYIY+ PPLYK+ RG+ +YCY+
Sbjct: 497 RYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLLEQGYIYIACPPLYKLERGRNHYYCYN 556
Query: 534 EADLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVF 593
E +L++ ++F NA+Y +QRFKGLGEMMP QLWETTMDPE R +K++ +EDAAEA+ +F
Sbjct: 557 ERELQERIATFPENANYTIQRFKGLGEMMPQQLWETTMDPETRTMKRVEIEDAAEADRIF 616
Query: 594 SSLMGARVDVRKELIQNAANMIDLDQLDI 622
+ LMG RV R+E I+ + + LDI
Sbjct: 617 TILMGDRVQPRREFIETYGPQLSMAALDI 645
>UniRef100_Q7V9N3 DNA gyrase B subunit [Prochlorococcus marinus]
Length = 658
Score = 773 bits (1997), Expect = 0.0
Identities = 386/627 (61%), Positives = 482/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGPRGLHHLVYE++DNAVDEA AG ++I VVL +D S SI+DNGRGIPTD+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNAVDEALAGHCNEIVVVLCSDGSASISDNGRGIPTDVHPK 93
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KSALETVLT+LHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R+G + Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGHIHNQ 151
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ RG P+ L P K GT++ F PD ++FTT I F+Y+ ++ R+RELA+LN
Sbjct: 152 RFERGAPIGNLRSTKQPVSEKKLTGTKVNFKPDTDIFTTGIVFDYSILSSRLRELAYLNG 211
Query: 181 KLTIALRKE----DNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGIT 235
+ I R E + EK YFY GG+ EYV ++N++K A+H +++ E +G+
Sbjct: 212 GVKIVFRDERQSVSDKEEKAYEEVYFYEGGIKEYVAYMNSEKDALHPEIIYVNSEKEGVQ 271
Query: 236 VDIALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITL 295
V+ ALQWC DAYSD+ILG+AN+IRTVDGGTHI+G+K LTRTLNS +K K+ D L
Sbjct: 272 VEAALQWCIDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNSFARKRGKRKDGDSNL 331
Query: 296 SGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDS 355
+GE++REGLT V+SVKVP PEFEGQTKT+LGN EVR +VD + E L +YLE +P V+D
Sbjct: 332 AGENIREGLTVVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLAQYLEFNPSVIDL 391
Query: 356 VLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGG 415
+L KA+ AF AA AA+RARELVR+KSVL S++LPGKLADCSS +P + EI+IVEGDSAGG
Sbjct: 392 ILEKAIQAFNAAEAARRARELVRRKSVLESTTLPGKLADCSSRDPSESEIYIVEGDSAGG 451
Query: 416 SAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRY 475
SAKQGRDRRFQAILPLRGKILNIE+ D+A +YKN EIQ LI GLGLG+KGEDF LRY
Sbjct: 452 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITGLGLGIKGEDFSLKNLRY 511
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQ+ L + GY+Y+ PPLYKV RGK YCY+E
Sbjct: 512 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYVYIACPPLYKVERGKNHTYCYNEG 571
Query: 536 DLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSS 595
DL+K +SF A+Y +QRFKGLGEMMP QLWETTMDP R++K++ +EDA EA+ +F+
Sbjct: 572 DLQKTITSFGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEIEDALEADRIFTI 631
Query: 596 LMGARVDVRKELIQNAANMIDLDQLDI 622
LMG +V R+E I+ + +D+ LDI
Sbjct: 632 LMGDKVAPRREFIETHSVELDMASLDI 658
>UniRef100_Q8YLN3 DNA gyrase B subunit [Anabaena sp.]
Length = 645
Score = 773 bits (1995), Expect = 0.0
Identities = 384/628 (61%), Positives = 489/628 (77%), Gaps = 13/628 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGPRGLHHLVYE++DN++DEA AG+ + I+V ++AD SV++ D+GRGIP D H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVEINADGSVAVTDDGRGIPIDTHSR 84
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KSALETV+T+LHAGGKFGG GY VSGGLHGVG+SVVNALSE +EVTVWR+ +TQ
Sbjct: 85 TGKSALETVMTVLHAGGKFGG--GGYKVSGGLHGVGISVVNALSEVVEVTVWRDKKVHTQ 142
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
Y RG PVT L + P++ R GT + F PD ++FT +IEF+Y T++GR+RELA+LN
Sbjct: 143 RYERGVPVTEL--ITNPYKEA-RTGTSVTFKPDTQIFTNSIEFDYITLSGRLRELAYLNA 199
Query: 181 KLTIA-----LRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHD-VLSFRKEIDGI 234
+ I L +D KV+S Y Y GG+ EY+ ++N DK+ +H+ ++ + E + +
Sbjct: 200 GVKITFTDNRLELLKSDTPKVES--YEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERNNV 257
Query: 235 TVDIALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDIT 294
++++LQWC DAY+D +LG+AN+IRT+DGGTH++G+KA LTRTLN++ +K IKE +
Sbjct: 258 QIEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNTIARKRNKIKEHEPN 317
Query: 295 LSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLD 354
LSGEHVREGLT V+SVKVP+PEFEGQTKT+LGN EVR +VD + E LTEYLE HP + D
Sbjct: 318 LSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIAD 377
Query: 355 SVLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAG 414
S+L KA+ AFKAA AA+ ARELVR+KSVL SS LPGKLADCSS +P + EI+IVEGDSAG
Sbjct: 378 SILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIYIVEGDSAG 437
Query: 415 GSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALR 474
GSAKQGRDRR QAILPLRGKILNIE+ D++ +YKN EIQ LI LGLGVKGE+F LR
Sbjct: 438 GSAKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEIQALITALGLGVKGEEFDSTQLR 497
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDE 534
YH+III+TDADVDGAHIRTL+LTFFYRYQRAL ++G+IY+ PPLYKV RG+ YCY E
Sbjct: 498 YHRIIIMTDADVDGAHIRTLILTFFYRYQRALIEQGFIYIACPPLYKVERGRNYEYCYSE 557
Query: 535 ADLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFS 594
+L++ + F NA+Y +QRFKGLGEMMP QLW TTM+PE R LK++ +EDAAEA+ +F+
Sbjct: 558 RELQQAIAKFPANANYTIQRFKGLGEMMPEQLWTTTMNPETRTLKRVEIEDAAEADRIFT 617
Query: 595 SLMGARVDVRKELIQNAANMIDLDQLDI 622
LMG RV R+E I+ + ++L LDI
Sbjct: 618 ILMGDRVAPRREFIETYGSKLNLTDLDI 645
>UniRef100_Q7UA07 DNA gyrase subunit B [Synechococcus sp.]
Length = 655
Score = 759 bits (1959), Expect = 0.0
Identities = 384/627 (61%), Positives = 473/627 (75%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG +I V L D S SI+DNGRGIPTD+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDRILVTLGEDGSASISDNGRGIPTDVHPR 90
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KSALETVLT+LHAGGKFG GY VSGGLHGVG+SVVNALSE ++VTV R+G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFGA--GGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQ 148
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ RG + +L P GT + F PD E+FT I F+Y T++ R+RELA+LN
Sbjct: 149 RFERGAAIGSLASEDQPASEAGETGTTVCFKPDIEIFTGGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKED----NDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGIT 235
+ I R E N+ + YFY GG+ EYV ++NT+K A+H D++ E DG+
Sbjct: 209 GVRIVFRDERESARNEVGEAHEETYFYEGGIKEYVAYMNTEKDALHPDIIYVNSEKDGVQ 268
Query: 236 VDIALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITL 295
V+ ALQWC DAYSD+ILG+AN+IRTVDGGTHI+G+K LTRTLN+ KK KE D L
Sbjct: 269 VEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNL 328
Query: 296 SGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDS 355
+GE++REGLT V+SVKVP PEFEGQTKT+LGN EVR +VD + E L+++LE +P V+
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEGLSQFLEFNPSVIGL 388
Query: 356 VLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGG 415
+L KA+ AF AA AA+RARELVR+KSVL SS+LPGKLADCSS +P + EI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRY 475
SAKQGRDRRFQAILPLRGKILNIE+ D+A +YKN EIQ LI LGLG+KGEDF LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQ+AL + GYIY+ PPLYKV RGK YCY+E
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKALVEGGYIYIACPPLYKVERGKNHTYCYNEG 568
Query: 536 DLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSS 595
DL+K SF A+Y +QRFKGLGEMMP QLWETTMDP R +K++ +EDA EA+ +F+
Sbjct: 569 DLQKTLQSFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDVRKELIQNAANMIDLDQLDI 622
LMG +V R+E I+ + +D+ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMTALDI 655
>UniRef100_Q8DL50 DNA gyrase subunit B [Synechococcus elongatus]
Length = 640
Score = 758 bits (1956), Expect = 0.0
Identities = 374/623 (60%), Positives = 484/623 (77%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGP+GLHHLVYE++DN+VDEA AG+ S I V ++AD SV++ D+GRGIPTD+HP
Sbjct: 25 MYIGSTGPKGLHHLVYEVVDNSVDEALAGYCSTILVQINADGSVTVTDDGRGIPTDIHPD 84
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T S +ETV+T+LHAGGKFG + GY VSGGLHGVG+SVVNALSE LEVTVWR G + Q
Sbjct: 85 TGVSGVETVMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSEWLEVTVWRNGFVHHQ 142
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
Y RG P T L + ++R+GT + F+PD+++FT IEF+ + R+RELA+LN
Sbjct: 143 RYERGVPTTPLEKTP---DTEERRGTSVTFFPDRQIFTETIEFDAKVLMTRLRELAYLNA 199
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGITVDIA 239
+ I + P S Y Y GG+ EYV+++ +K+ +H +++ + E D + V+ A
Sbjct: 200 GIRIEFKDLRVTPPL--SETYCYEGGIREYVRYMVQEKEPLHPEIIYIQGEKDDVQVEAA 257
Query: 240 LQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEH 299
LQWC DAYS+ +LG+AN+IRT+DGGTH++G+KA LTRTLN+LG+K +KE + L+GE+
Sbjct: 258 LQWCADAYSENLLGFANNIRTIDGGTHMEGLKAVLTRTLNALGRKRNKLKENNANLAGEN 317
Query: 300 VREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSK 359
+REGLT ++SVKVPNPEFEGQTKT+LGN EVR +VD + LTEYL+ HP+V D++L K
Sbjct: 318 IREGLTAIISVKVPNPEFEGQTKTKLGNTEVRGIVDAIVGAALTEYLDFHPNVTDTILEK 377
Query: 360 ALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQ 419
A+ AF AA AA+RARE+VR+KSVL SS+LPGKLADCSS +P EIFIVEGDSAGGSAKQ
Sbjct: 378 AIQAFNAAEAARRAREMVRRKSVLESSTLPGKLADCSSRDPAVSEIFIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKII 479
GRDRRFQAILPLRGKILNIE+ D+A +YKN E+Q+LI LGLGVKGE+F LRYHKII
Sbjct: 438 GRDRRFQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGEEFDPAKLRYHKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKK 539
++TDADVDG+HIRTLLLTFFYRYQ+ L ++G++Y+ PPLYKV RG+Q YCY + +L++
Sbjct: 498 LMTDADVDGSHIRTLLLTFFYRYQQELVNQGFVYIACPPLYKVERGRQHFYCYSDRELQQ 557
Query: 540 LKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGA 599
+SF NA+Y +QRFKGLGEMMP QLWETTM+PE R+LK++ +EDAAEA+ +F+ LMG
Sbjct: 558 QIASFPENANYTIQRFKGLGEMMPEQLWETTMNPETRILKRVEIEDAAEADRIFTILMGD 617
Query: 600 RVDVRKELIQNAANMIDLDQLDI 622
RV R+E I+ + L+ LDI
Sbjct: 618 RVAPRREFIETYGPQLALENLDI 640
>UniRef100_Q7V940 DNA gyrase, subunit B precursor [Prochlorococcus marinus]
Length = 655
Score = 754 bits (1948), Expect = 0.0
Identities = 383/627 (61%), Positives = 476/627 (75%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGPRGLHHLV+E++DN+VDEA AG +I VVL D S SI+DNGRGIPTD+H
Sbjct: 31 MYIGSTGPRGLHHLVFEVVDNSVDEALAGHCDEILVVLGPDGSASISDNGRGIPTDVHSR 90
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KSALETVLT+LHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R+G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ RG + +L P K R GT + F PD+E+FT I F+Y T++ R+RELA+LN
Sbjct: 149 RFERGTAIGSLRSEAQPASEKGRTGTSVCFKPDEEIFTVGIVFDYATLSTRLRELAYLNG 208
Query: 181 KLTIALRKEDN---DPEKVQSNE-YFYAGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGIT 235
+ I R E D E E YFY GG+ EYV ++N +K A+H +++ E D +
Sbjct: 209 GVRIVFRDERQPVLDAEGAPHEEVYFYEGGIKEYVTYMNAEKDALHPEIIYVNSEKDNVQ 268
Query: 236 VDIALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITL 295
V+ ALQWC DAYSD+ILG+AN+IRTVDGGTHI+G+K LTRTLN+ +K KE D L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNL 328
Query: 296 SGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDS 355
+GE++REGLT V+SVKVP+PEFEGQTKT+LGN EVR +VD + E L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALSQYLEFNPAVIDL 388
Query: 356 VLSKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGG 415
+L KA+ AF AA AA+RARELVR+KSVL SS+LPGKLADCSS +P + EI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRY 475
SAKQGRDRRFQAILPLRGKILNIE+ D+A +YKN EIQ LI LGLG+KGE+F LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDSKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEA 535
H+++I+TDADVDGAHIRTL+LTFFYRYQ+ L + GYIY+ PPLYKV RGK YCY+E
Sbjct: 509 HRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEV 568
Query: 536 DLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSS 595
DL+ S F A+Y +QRFKGLGEMMP QLWETTMDP R++K++ V+DA EA+ +F+
Sbjct: 569 DLQTTLSGFPEKANYTIQRFKGLGEMMPKQLWETTMDPSARMMKRVEVQDALEADRIFTI 628
Query: 596 LMGARVDVRKELIQNAANMIDLDQLDI 622
LMG +V R+E I+ + +D+ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMAALDI 655
>UniRef100_UPI000030137C UPI000030137C UniRef100 entry
Length = 655
Score = 746 bits (1927), Expect = 0.0
Identities = 371/625 (59%), Positives = 477/625 (75%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG I++VL AD S I+DNGRGIPTD+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDHIEIVLRADGSALISDNGRGIPTDIHPR 93
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KSALETVLT+LHAGGKFG + GY VSGGLHGVG+SVVNALSE + VTV+R+G E+ Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQ 151
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ +G L ++GT I F PDK +F+ IEFEY ++ R+RELA+LN
Sbjct: 152 RFEKGVSKGELE-TKKQTGKPSKKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDNDPEKVQSNE--YFYAGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGITVD 237
+ I R E N E Y Y GG+ EYV+++N +K ++H +++ + + + V+
Sbjct: 211 GVKIVFRDERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKDSIHPEIIYVDSQKENVYVE 270
Query: 238 IALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSG 297
ALQWC D YSD ILG+AN+IRT+DGGTHI+G+K LTRT N+L KK K+ + L+G
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAG 330
Query: 298 EHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVL 357
E++REGLT V+SVKVP+PEFEGQTKT+LGN EVR +VD I E LT+Y+E +P +LD +L
Sbjct: 331 ENIREGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLIL 390
Query: 358 SKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSA 417
KA+ +F AA AA+RARELVR+KSVL SS+LPGKLADCSS +P + EI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHK 477
KQGRDR FQAILPLRGKILNIE+ D+ +YKN EIQ+LI LGLG+KGE+F++ +LRYH+
Sbjct: 451 KQGRDRNFQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFEESSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADL 537
++I+TDADVDGAHIRTLLLTFFYRYQR L ++G+IY+ PPLYKV RGK +YCY+E L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQL 570
Query: 538 KKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLM 597
K F NA+YN+QRFKGLGEMMP QLW+TTM+P+ R++K++ +EDA EA+ +F+ LM
Sbjct: 571 KDTIQGFGENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDVRKELIQNAANMIDLDQLDI 622
G +V R+E I+ ++ +D+ LDI
Sbjct: 631 GDKVAPRREFIETHSSNLDMATLDI 655
>UniRef100_Q7UZM4 DNA gyrase, subunit B precursor [Prochlorococcus marinus subsp.
pastoris]
Length = 655
Score = 739 bits (1909), Expect = 0.0
Identities = 373/625 (59%), Positives = 472/625 (74%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG I++VL D S I+DNGRGIPTD+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDHIEIVLKEDGSALISDNGRGIPTDIHPR 93
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KSALETVLT+LHAGGKFG + GY VSGGLHGVG+SVVNALSE + VTV R+G E+ Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVHVTVSRDGYEFNQ 151
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ +G L + R+GT I F PD +FT I+F+Y ++ R+RELA+LN
Sbjct: 152 RFEKGIAKGELKSQKQQ-KKPFRKGTTICFKPDTSIFTDGIKFDYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDNDPEKVQSNE--YFYAGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGITVD 237
+ I R E + E Y Y GG+ EYV+++N +K+++H +V+ + D + V+
Sbjct: 211 GVKIIFRDERQNLSDGSFKEEIYLYDGGIKEYVEYINKEKESIHSEVIYVDSQKDNVYVE 270
Query: 238 IALQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSG 297
ALQWC D YSD ILG+AN+IRT+DGGTHIDG+K LTRT N++ KK KE D LSG
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIDGLKTVLTRTFNAIAKKRGKRKEVDKNLSG 330
Query: 298 EHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVL 357
E++REGLT V+SVKVP PEFEGQTKT+LGN EVR +VD I E L +Y+E +P+V D +L
Sbjct: 331 ENIREGLTVVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLIGESLIKYMEFNPNVFDLIL 390
Query: 358 SKALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSA 417
KA+ +F AA AAKRAR+LVR+KSVL SS+LPGKLADCSS +P EI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAAKRARDLVRRKSVLESSTLPGKLADCSSRDPSGAEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHK 477
KQGRDRRFQAILPLRGKILNIE+ D+A +YKN EIQ+LI LGLG+KGE+F ++LRYH+
Sbjct: 451 KQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEEFNVNSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADL 537
++I+TDADVDGAHIRTLLLTFFYRYQR L ++G+IY+ PPLYKV RGK YCY+E L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRDLVEKGFIYIACPPLYKVERGKNHKYCYNENQL 570
Query: 538 KKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLM 597
K+ F A+YN+QRFKGLGEMMP QLW+TTM+P+ R++K++ +EDA EA+ +F+ LM
Sbjct: 571 KQTIEDFGEKANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDVRKELIQNAANMIDLDQLDI 622
G +V R+E I+ + +D+ LDI
Sbjct: 631 GDKVAPRREFIETHSANLDMATLDI 655
>UniRef100_Q7NHM9 DNA gyrase subunit B [Gloeobacter violaceus]
Length = 644
Score = 732 bits (1890), Expect = 0.0
Identities = 369/627 (58%), Positives = 465/627 (73%), Gaps = 12/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGSTGPRGLHHLVYEI+DN+VDEA AG I + L AD S +I D+GRGIPTD HP
Sbjct: 25 MYIGSTGPRGLHHLVYEIVDNSVDEALAGHCKHIAISLGADGSATITDDGRGIPTDTHPR 84
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T KS +ETVLT+L AGGKFGG GY VSGGLHGVG +VVNALS L T+WREG +Y Q
Sbjct: 85 TGKSTIETVLTVLGAGGKFGG--GGYKVSGGLHGVGAAVVNALSTILTATIWREGKQYIQ 142
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ RG P L + +++ R+GT I F PD E+FTT ++F+++T+ R RELAFLN
Sbjct: 143 RFHRGIPEGGL---AVSSDSQKRRGTMISFLPDPEIFTTGVDFDFDTLLSRFRELAFLNA 199
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGITVDIA 239
+ R D E ++ Y Y GG+ EYV+++ +K A+H D++ +E DG++V+ A
Sbjct: 200 G--VEFRFSDLRGETERTESYIYEGGIREYVKYMTREKAALHPDIIFINQERDGVSVECA 257
Query: 240 LQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEH 299
LQW D Y+D +LG+AN+IRT+DGGTH++G+KA LTRT NS +K+ +K+ D L+GEH
Sbjct: 258 LQWSTDVYNDNVLGFANNIRTIDGGTHLEGLKAVLTRTFNSFARKANKLKDGDKNLTGEH 317
Query: 300 VREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSK 359
VREGLT V+SVKVPNPEFEGQTKT+LGNPEVR +VD I E LTEYLE HPDV+ S+L K
Sbjct: 318 VREGLTAVLSVKVPNPEFEGQTKTKLGNPEVRGIVDGVISEKLTEYLEFHPDVVASILEK 377
Query: 360 ALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQ 419
AL + +A AA++AR+LVR+KS L SS+LPGKLADC S +P + E+F+VEGDSAGGSAKQ
Sbjct: 378 ALQSMQAEEAARKARDLVRRKSALESSTLPGKLADCQSRDPAESEVFLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKII 479
GRDRRFQAILPLRGKILNIER D+ +Y N EIQ +I GLGLG+K E+F LRYH+II
Sbjct: 438 GRDRRFQAILPLRGKILNIERADDRKIYGNNEIQAMITGLGLGLKTEEFDVGRLRYHRII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVT----RGKQVHYCYDEA 535
I+TDADVDGAHIRTLLLTFFYRY+R L ++GYIY+ PPLYK++ R V YCY E
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYKRDLVEQGYIYIAQPPLYKISIGGGRNIDVRYCYSEQ 557
Query: 536 DLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSS 595
+ + + N Y +QRFKGLGEM QLWETTM+PE R L+++T+EDAAEA+ VF+
Sbjct: 558 EKEAILRGLRENQKYELQRFKGLGEMQADQLWETTMNPETRTLRQVTIEDAAEADRVFNI 617
Query: 596 LMGARVDVRKELIQNAANMIDLDQLDI 622
LMG RV+ R+E I+ + + LDI
Sbjct: 618 LMGDRVEPRREFIETYGPRLQMADLDI 644
>UniRef100_UPI000031EA9D UPI000031EA9D UniRef100 entry
Length = 580
Score = 694 bits (1791), Expect = 0.0
Identities = 353/579 (60%), Positives = 433/579 (73%), Gaps = 7/579 (1%)
Query: 28 AGFASKIDVVLHADDSVSIADNGRGIPTDMHPTTKKSALETVLTILHAGGKFGGINSGYS 87
AG +I V L D S SI+DNGRGIPTD+HP T KSALETVLT+LHAGGKFG GY
Sbjct: 2 AGHCDRILVTLGEDGSASISDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFGA--GGYK 59
Query: 88 VSGGLHGVGLSVVNALSEALEVTVWREGLEYTQTYSRGKPVTTLNCVMLPFENKDRQGTR 147
VSGGLHGVG+SVVNALSE ++VTV R+G + Q + RG + +L P GT
Sbjct: 60 VSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGSLASEDQPASETGETGTT 119
Query: 148 IKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNPKLTIALRKED----NDPEKVQSNEYFY 203
+ F PD E+FT I F+Y T++ R+RELA+LN + I R E N+ + YFY
Sbjct: 120 VCFKPDIEIFTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESARNEAGEAHEEIYFY 179
Query: 204 AGGLAEYVQFLNTDKKAVH-DVLSFRKEIDGITVDIALQWCEDAYSDTILGYANSIRTVD 262
GG+ EYV ++N +K A+H D++ E DG+ V+ ALQWC DAYSD+ILG+AN+IRTVD
Sbjct: 180 EGGIKEYVAYMNKEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVD 239
Query: 263 GGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTK 322
GGTHI+G+K LTRTLN+ KK KE D L+GE++REGLT V+SVKVP PEFEGQTK
Sbjct: 240 GGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTK 299
Query: 323 TRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARELVRQKSV 382
T+LGN EVR +VD + E L+++LE +P V+ +L KA+ AF AA AA+RARELVR+KSV
Sbjct: 300 TKLGNTEVRGIVDNLVGEGLSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSV 359
Query: 383 LRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRD 442
L SS+LPGKLADCSS +P + EI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNIE+ D
Sbjct: 360 LESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTD 419
Query: 443 EAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFYRY 502
+A +YKN EIQ LI LGLG+KGEDF LRYH+++I+TDADVDGAHIRTLLLTFFYRY
Sbjct: 420 DAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRY 479
Query: 503 QRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAPNASYNMQRFKGLGEMM 562
Q+AL + GYIY+ PPLYKV RGK YCY+E DL+K F A+Y +QRFKGLGEMM
Sbjct: 480 QKALVEGGYIYIACPPLYKVERGKNHTYCYNEGDLQKTLQGFGEKANYTIQRFKGLGEMM 539
Query: 563 PLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGARV 601
P QLWETTMDP R +K++ +EDA EA+ +F+ LMG +V
Sbjct: 540 PKQLWETTMDPTTRTMKRVEIEDALEADRIFTILMGDKV 578
>UniRef100_Q8RSD5 DNA gyrase subunit B [Plectonema boryanum]
Length = 546
Score = 684 bits (1765), Expect = 0.0
Identities = 338/555 (60%), Positives = 434/555 (77%), Gaps = 12/555 (2%)
Query: 10 GLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPTTKKSALETV 69
GLHHLVYE++DN+VDEA AG+ ID+ ++AD SV++ D+GRGIPT +HP T KSALETV
Sbjct: 1 GLHHLVYEVVDNSVDEALAGYCKAIDISINADGSVTVTDDGRGIPTGIHPKTGKSALETV 60
Query: 70 LTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQTYSRGKPVT 129
+TILHAGGKFGG GY VSGGLHGVG+SVVNALSE +EVTVWRE + Q + RG +
Sbjct: 61 MTILHAGGKFGG--GGYKVSGGLHGVGISVVNALSEWVEVTVWREKKVHLQRFERGIAMG 118
Query: 130 TLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP--KLTIALR 187
L P + R GT + F PD +FT +F+Y T++GR+RELA+LN ++ A
Sbjct: 119 ELQVEPYP---QARTGTSVTFLPDASIFTETTKFDYTTLSGRLRELAYLNGGVRIKFADH 175
Query: 188 KEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRK-EIDGITVDIALQWCEDA 246
+E ++ E V YFY GG+ EY+ ++N +K+ +H+ + F E +GI V++ALQWC DA
Sbjct: 176 REGSEREDV----YFYEGGIREYISYMNREKQPLHEEVIFVSGERNGIQVEVALQWCSDA 231
Query: 247 YSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHVREGLTC 306
Y+D I+G+AN+IRTVDGGTH++G+KA LTRTLN++ +K IKE + L+GE++REGLT
Sbjct: 232 YNDNIIGFANNIRTVDGGTHLEGLKAVLTRTLNTIARKRNKIKENESNLAGENIREGLTA 291
Query: 307 VVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKA 366
V+SVKVP+PEFEGQTKT+LGN EVR +VD + E LTEYLE P+V D+++ KA+ AFKA
Sbjct: 292 VISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPNVSDAIIEKAVQAFKA 351
Query: 367 ALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQ 426
A AA+ ARE+VR+KSVL SS+LPGKLADC+S +P + EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 352 AEAARHAREMVRRKSVLESSTLPGKLADCASRDPSESEIYIVEGDSAGGSAKQGRDRRFQ 411
Query: 427 AILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADV 486
AILPLRGKILNIE+ D++ +YKN EIQ LI LGLG+KGE+F LRYH+III+TDADV
Sbjct: 412 AILPLRGKILNIEKTDDSKIYKNTEIQALITALGLGIKGEEFDVSQLRYHRIIIMTDADV 471
Query: 487 DGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAP 546
DGAHIRTLLLTFFYRYQR + D+GY+Y+ PPL+KV RG+ +YCY E +L++ ++F
Sbjct: 472 DGAHIRTLLLTFFYRYQRMMVDQGYVYIACPPLFKVERGRNHYYCYSERELQERLATFPD 531
Query: 547 NASYNMQRFKGLGEM 561
NASYN+QRFKGLGEM
Sbjct: 532 NASYNIQRFKGLGEM 546
>UniRef100_Q8RSD3 DNA gyrase subunit B [Synechococcus sp]
Length = 545
Score = 680 bits (1755), Expect = 0.0
Identities = 339/553 (61%), Positives = 428/553 (77%), Gaps = 15/553 (2%)
Query: 18 ILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPTTKKSALETVLTILHAGG 77
++DNAVD+A AG+ + IDV L D S + DNGRGIPTD+HP T KSALETVLTILHAGG
Sbjct: 1 VVDNAVDKALAGYCNTIDVRLLKDGSCQVTDNGRGIPTDIHPQTGKSALETVLTILHAGG 60
Query: 78 KFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQTYSRGKPVTTLNCVMLP 137
KFGG GY VSGGLHGVG+SVVNALSE +EVTVWREG + Q + +G P+ L
Sbjct: 61 KFGG--GGYKVSGGLHGVGVSVVNALSEYVEVTVWREGKTHQQRFEQGNPIGELQVAP-- 116
Query: 138 FENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNPKLTIALRKE------DN 191
+ DR+GT+++F PD +F+ EF+Y T+A R++ELA+LN + I E ++
Sbjct: 117 -DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNAGVRIDFTDERLQLTKNH 175
Query: 192 DPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSF-RKEIDGITVDIALQWCEDAYSDT 250
+P + Y++ GG+ EYV ++NTDK+A+H + F + E DG+ V+ ALQWC DAYSD
Sbjct: 176 EPHQ---ETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQVEAALQWCVDAYSDN 232
Query: 251 ILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSV 310
ILG+AN+IRT+DGGTHI+G+K LTRT+N++ +K K+ D LSGE++REGLT +VSV
Sbjct: 233 ILGFANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLSGENIREGLTAIVSV 292
Query: 311 KVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAA 370
KVP+PEFEGQTKT+LGN EVR +VD + E LTEYLE HP V D +L KA+ AF AA AA
Sbjct: 293 KVPDPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLILEKAIQAFNAAEAA 352
Query: 371 KRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILP 430
+RARELVR+KSVL SS+LPGKLADCSS +P + EIFIVEGDSAGGSAKQGRDRRFQAILP
Sbjct: 353 RRARELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAILP 412
Query: 431 LRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAH 490
LRGKILNIE+ D+A +YKN EIQ LI LGLG+KGE+F LRYH+I+I+TDADVDGAH
Sbjct: 413 LRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDASQLRYHRIVIMTDADVDGAH 472
Query: 491 IRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAPNASY 550
IRTLLLTFFYRYQR+L ++GY+Y+ PPLYK+ RG+ +YCY+E +L++ ++F NA+Y
Sbjct: 473 IRTLLLTFFYRYQRSLLEQGYMYIACPPLYKLERGRNHYYCYNERELQERIATFPENANY 532
Query: 551 NMQRFKGLGEMMP 563
+QRFKGLGEMMP
Sbjct: 533 TIQRFKGLGEMMP 545
>UniRef100_Q98RQ4 DNA gyrase subunit B [Guillardia theta]
Length = 684
Score = 647 bits (1668), Expect = 0.0
Identities = 329/629 (52%), Positives = 443/629 (70%), Gaps = 15/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
++IGSTG +G HHLVYEI+DN+VDE+ AGF K+DV++++D SV+I DNGRGIPTD+HP
Sbjct: 64 VFIGSTGLKGFHHLVYEIVDNSVDESMAGFCEKVDVIINSDKSVTIRDNGRGIPTDLHPI 123
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
T K+ALETVLTILHAGGKFGG GY VSGGLHGVG+SVVN LSE L + R +
Sbjct: 124 TNKTALETVLTILHAGGKFGG--GGYKVSGGLHGVGVSVVNGLSEYLNINTQRNQRKIGM 181
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ RGK ++ C + F+ GT I F PD ++F + +F+ I GR+ ELAFLN
Sbjct: 182 RFVRGKKIS--ECNISSFKKNIINGTTINFKPDYQIFFSEFDFDSYVIGGRLNELAFLNS 239
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDVLSFRKEIDGITVDIAL 240
L + L ED + ++S+ + + GG+ EY+ + +KK +H+ + K + ++I
Sbjct: 240 NLKLLL--EDRRSKIIKSSLFLHDGGIMEYINEMTINKKRLHNPIILSKIFNNSQIEIGF 297
Query: 241 QWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEHV 300
W + Y + IL + N+IRTV+GGTH+DG K +T+ +N L KK KEK ++SGE +
Sbjct: 298 VWSSEQYQENILSFVNNIRTVEGGTHVDGFKQGITKLVNLLSKKKIKSKEKLNSISGEFI 357
Query: 301 REGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEY-LTEYLELHPDVLDSVLSK 359
REGLTC+++VK PEFEGQ K++LGNP+++ +V+ I+E ++E + ++L+ VL K
Sbjct: 358 REGLTCLINVKTSEPEFEGQIKSKLGNPDIKFLVENLIKEEGEIHFIENNSNLLNIVLEK 417
Query: 360 ALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQ 419
A++A A A+K+A+ELVR+KS+L +LPGKL+DCS NP+ EIFIVEGDSAGGSAKQ
Sbjct: 418 AISAMNAYEASKKAKELVRKKSILEGITLPGKLSDCSEKNPQFSEIFIVEGDSAGGSAKQ 477
Query: 420 GRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKII 479
RDRRFQAILPLRGKI+NIE+ DE +Y N EIQ+LI LGLGV+G D LRYHKII
Sbjct: 478 ARDRRFQAILPLRGKIINIEKNDEKKIYNNTEIQSLISALGLGVRGNDEDLSNLRYHKII 537
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTR------GKQVHYCYD 533
I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G++Y+ PPLYK+ K YCY
Sbjct: 538 IMTDADVDGAHIRTLLLTFFYRYQKELIDKGFVYIACPPLYKIENKKNKNLDKNTQYCYS 597
Query: 534 EADLKKLKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVF 593
E +L+ + S + + N+QRFKGLGEMMP QLW+TTM PE R+LKK+ + DA A+ +F
Sbjct: 598 EGELEYIIQS--SHFNKNIQRFKGLGEMMPEQLWKTTMSPEMRILKKIKLSDAKRADKIF 655
Query: 594 SSLMGARVDVRKELIQNAANMIDLDQLDI 622
LMG++V RK+ IQ A++I +D LDI
Sbjct: 656 EVLMGSKVPERKKFIQIQASLIKIDSLDI 684
>UniRef100_Q8GE20 DNA gyrase subunit B [Heliobacillus mobilis]
Length = 641
Score = 637 bits (1642), Expect = 0.0
Identities = 332/623 (53%), Positives = 440/623 (70%), Gaps = 17/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGST RGLHHLVYEI+DN++DEA AG+ I+V++H D+S+ ++DNGRGIP D+HP
Sbjct: 35 MYIGSTSARGLHHLVYEIVDNSIDEALAGYCDTIEVIIHEDNSIEVSDNGRGIPVDIHPK 94
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
K A+E LT+LHAGGKFGG GY VSGGLHGVGLSVVNALSE L+VTV R G + Q
Sbjct: 95 MGKPAVEVALTVLHAGGKFGG--EGYKVSGGLHGVGLSVVNALSEKLKVTVRRNGKVHEQ 152
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
Y RG +T L V N + GT I F PD +F +E+ Y T++ R+REL+FLN
Sbjct: 153 YYERGVTMTDLKVV----GNAESTGTTIYFKPDGLIFEE-LEYSYETLSHRLRELSFLNR 207
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHD-VLSFRKEIDGITVDIA 239
+ I L+ E + ++E GG+ ++V+FLN +K +H V+ F+ E +G+ V++A
Sbjct: 208 GVKITLKDLRTGQESIFAHE----GGIIDFVKFLNRNKDLIHPHVIYFQNEKEGVHVEMA 263
Query: 240 LQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEH 299
LQ+ D YS+T+ YAN+I T +GGTH G K +LTR +N G++ IKE D LSGE
Sbjct: 264 LQY-NDGYSETLFSYANNINTQEGGTHESGFKTALTRVINDYGRRINQIKENDSNLSGED 322
Query: 300 VREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSK 359
+REG+T V+SVKV P+FEGQTKT+LGN EVR + D + E L+ YLE +P V V+ K
Sbjct: 323 IREGITAVISVKVREPQFEGQTKTKLGNSEVRGITDSCVTEGLSTYLEENPSVGKKVIEK 382
Query: 360 ALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQ 419
AL+A +A AA++AREL R+KS L S+SLPGKLADCS +P CE++IVEGDSAGGSAKQ
Sbjct: 383 ALSAMRAREAARKARELTRRKSALESTSLPGKLADCSFKDPSMCELYIVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKII 479
GRDRRFQAILPLRGKILN+E+ + NEEI+ LI LG G+ GEDF RYH++
Sbjct: 443 GRDRRFQAILPLRGKILNVEKSRLDKILSNEEIRALITALGTGI-GEDFDLSKARYHRVC 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKK 539
++TDADVDG+HIRTLLLTFF+R+ + L + GY+Y+ PPLY+V +G+ V Y Y + +L +
Sbjct: 502 LMTDADVDGSHIRTLLLTFFFRHMKPLIENGYVYIAQPPLYQVKKGRDVRYYYHDNELNQ 561
Query: 540 LKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGA 599
+ +QR+KGLGEM P QLW+TTMDPE R + ++++EDAAEA +F++LMG
Sbjct: 562 YLDKNGRD-GVTIQRYKGLGEMNPEQLWDTTMDPEHRTILQVSMEDAAEAESIFTTLMGD 620
Query: 600 RVDVRKELIQNAANMIDLDQLDI 622
RV+ R+E IQ+ A D+ LDI
Sbjct: 621 RVEPRREFIQSHAK--DVRNLDI 641
>UniRef100_O50627 DNA gyrase subunit B [Bacillus halodurans]
Length = 637
Score = 630 bits (1624), Expect = e-179
Identities = 324/616 (52%), Positives = 425/616 (68%), Gaps = 12/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 60
MYIGST RGLHHLV+EI+DN++DEA AGF +I VV+ D+S+++ DNGRGIP +H
Sbjct: 28 MYIGSTSSRGLHHLVWEIVDNSIDEAMAGFCDEIGVVIEEDNSITVTDNGRGIPVGIHEK 87
Query: 61 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 120
+ A+E ++T+LHAGGKFGG GY VSGGLHGVG SVVNALS LEV V REG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFGG--GGYKVSGGLHGVGASVVNALSTMLEVEVHREGKVHYQ 145
Query: 121 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 180
+ RG P L + DR GT+I F PD ++FT FEY+T+A R+RELAFLN
Sbjct: 146 KFHRGVPAADLEVI----GTTDRTGTKIHFKPDGDIFTETTVFEYDTLASRLRELAFLNK 201
Query: 181 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKKAVHDV-LSFRKEIDGITVDIA 239
L I K + E+ +S+E+ Y GG+A +V+ LN ++ +H+ + E G+ V+IA
Sbjct: 202 GLRI---KITDMREEEKSDEFHYEGGIASFVEHLNRTRETLHETPIHIEGEKQGVYVEIA 258
Query: 240 LQWCEDAYSDTILGYANSIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKEKDITLSGEH 299
+Q+ D ++ I +AN+I T +GGTH G K LTR +N +K + KE D L+GE
Sbjct: 259 VQY-NDGFTSNIYSFANNINTHEGGTHESGFKTGLTRVINDYARKHNLFKESDPNLTGED 317
Query: 300 VREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSK 359
VREGLT ++SVK+P+P+FEGQTKT+LGN E R + D E+ + +L HP V ++ K
Sbjct: 318 VREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSLFTEHFSRFLIEHPQVARKLVDK 377
Query: 360 ALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQ 419
L A +A AAK+AREL R+KS L SSLPGKLADCSS + EI+IVEGDSAGGSAKQ
Sbjct: 378 GLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSSRDASISEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKII 479
GRDR FQAILPLRGKILN+E+ + N EI+ +I LG G+ G+DF + RYHKII
Sbjct: 438 GRDRHFQAILPLRGKILNVEKARLDKILANNEIRAIITALGTGI-GDDFDIEKARYHKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKK 539
I+TDADVDGAHIRTL+LTFFYRY R L + GY+Y+ PPLYKV +GK + Y Y +A+L++
Sbjct: 497 IMTDADVDGAHIRTLILTFFYRYMRPLIEHGYVYIAQPPLYKVQQGKDIQYAYGDAELQE 556
Query: 540 LKSSFAPNASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGA 599
+ S A +QR+KGLGEM P QLWETTMDP QR + ++T+EDA +A+ +F LMG
Sbjct: 557 ILSQLPDKAKPGIQRYKGLGEMNPSQLWETTMDPGQRTVLQVTLEDAMKADEIFEILMGD 616
Query: 600 RVDVRKELIQNAANMI 615
RV+ R++ IQ A +
Sbjct: 617 RVEPRRDFIQENARYV 632
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.136 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,008,784,157
Number of Sequences: 2790947
Number of extensions: 42707610
Number of successful extensions: 131841
Number of sequences better than 10.0: 3331
Number of HSP's better than 10.0 without gapping: 3246
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 116553
Number of HSP's gapped (non-prelim): 3745
length of query: 622
length of database: 848,049,833
effective HSP length: 134
effective length of query: 488
effective length of database: 474,062,935
effective search space: 231342712280
effective search space used: 231342712280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)
Medicago: description of AC122169.6