BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122166.12 - phase: 0 /pseudo
(170 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q947X7 Hypothetical protein OSJNBa0067N01.20 [Oryza sa... 66 3e-10
UniRef100_Q5ZDG9 Hypothetical protein P0480E02.9 [Oryza sativa] 63 3e-09
UniRef100_Q8H992 Oryza sativa (japonica cultivar-group) retrotra... 62 4e-09
UniRef100_Q5SMW3 Cyst nematode resistance protein-like [Oryza sa... 61 1e-08
UniRef100_Q5ZCK2 Rust resistance protein Rp1-dp8-like [Oryza sat... 60 2e-08
UniRef100_Q65WR1 Putative polyprotein [Oryza sativa] 57 2e-07
UniRef100_Q7X5Z1 OSJNBa0006A01.14 protein [Oryza sativa] 57 2e-07
UniRef100_Q8SAZ6 Putative non-LTR retroelement reverse transcrip... 57 2e-07
UniRef100_Q84Q64 Hypothetical protein OSJNBa0071M09.16 [Oryza sa... 56 3e-07
UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa] 56 3e-07
UniRef100_Q7XKF8 OSJNBb0065J09.11 protein [Oryza sativa] 56 3e-07
UniRef100_Q8LID8 Cyst nematode resistance protein-like protein [... 55 7e-07
UniRef100_Q7XET4 Contains similarity to non-LTR reverse transcri... 55 7e-07
UniRef100_Q6AUJ7 Hypothetical protein OSJNBa0052E20.4 [Oryza sat... 54 2e-06
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip... 54 2e-06
UniRef100_Q7XMF6 OSJNBa0061G20.3 protein [Oryza sativa] 54 2e-06
UniRef100_Q6Z0B6 Cyst nematode resistance protein-like protein [... 53 4e-06
UniRef100_Q8SA09 Reverse transcriptase-like protein [Oryza sativa] 53 4e-06
UniRef100_Q7XT18 OSJNBb0050O03.4 protein [Oryza sativa] 52 8e-06
UniRef100_Q94H40 Putative reverse transcriptase [Oryza sativa] 51 1e-05
>UniRef100_Q947X7 Hypothetical protein OSJNBa0067N01.20 [Oryza sativa]
Length = 387
Score = 66.2 bits (160), Expect = 3e-10
Identities = 43/137 (31%), Positives = 69/137 (49%), Gaps = 15/137 (10%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPS-EAGLCVSG*GVLESAQHLFLSCS 60
IW P +V FAW + ++RLPT+ NL + ++P+ LC + LE H+FL C
Sbjct: 229 IWRSAAPPRVKFFAWLMSKNRLPTRVNLHKKTILPTPTCELCNAN---LEDTYHIFLRCP 285
Query: 61 YFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFL-QLIWLLCAWVLWTER 119
A W++++ + + + LSD +H+ S +FL +LLC W LW R
Sbjct: 286 MAAAFWNMIQ-----IIPEISSLSD-----LHNLELSGPLPTFLSSTFFLLCCWRLWNHR 335
Query: 120 NNMCFNDSIIPIPRLLD 136
N + F + I RL++
Sbjct: 336 NEVVFQNLPPSISRLIN 352
>UniRef100_Q5ZDG9 Hypothetical protein P0480E02.9 [Oryza sativa]
Length = 385
Score = 63.2 bits (152), Expect = 3e-09
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
+IW P K FAW ++++R+ T + L RG +C E+A HL C
Sbjct: 230 LIWKPWAPHKCKTFAWLIIQNRVWTSNRLATRGW--PNGSICPLCRHRQETAIHLLAECR 287
Query: 61 YFALLWSLVRDWIGFVGVDTNVL--SDHFVQFVHSTGGSK-ASQSFLQLIWLLCAWVLWT 117
Y +W + +W ++ ++ + ++ +T +K A + L+ + LL AW +W
Sbjct: 288 YTRRIWGAIAEWTACEQLNPSLWHQASTVSEWWEATANTKDAPKKALRTLTLLVAWEIWN 347
Query: 118 ERNNMCFNDSIIPIPRLLDKVKYLSLGW 145
ERN F + + LL K+K + W
Sbjct: 348 ERNRRTFQQKELSMGSLLAKIKEEAKSW 375
>UniRef100_Q8H992 Oryza sativa (japonica cultivar-group) retrotransposon Karma DNA,
complete sequence [Oryza sativa]
Length = 1197
Score = 62.4 bits (150), Expect = 4e-09
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
IW ++PLK+ +FAW L+RDRL TK NL+ + ++ + C E+A HL +C +
Sbjct: 1036 IWDCRMPLKIKLFAWLLVRDRLSTKLNLLKKKIV--QTATCDICSTTDETADHLSFNCPF 1093
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
W + I + +T LS +T ++ QSF ++LC WVLW R++
Sbjct: 1094 AISFWQALH--IQPIINETKYLSQ---LKAPATIPTRHFQSF----FMLCFWVLWNHRHD 1144
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSW---WSNPLQCL 168
+ F I L + S W +T F W +S+ LQ L
Sbjct: 1145 VVFRGRPPSIASCLQRGISESSLWAETFTPDDRFVIDVWKGVFSSSLQTL 1194
>UniRef100_Q5SMW3 Cyst nematode resistance protein-like [Oryza sativa]
Length = 185
Score = 60.8 bits (146), Expect = 1e-08
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
+IW P K FAW ++++R+ T L RG +C E+A HL +C
Sbjct: 25 LIWKAWAPHKCKTFAWLIIQNRVWTSDKLATRGW--PNGSICPLCRRTQETALHLLAACR 82
Query: 61 YFALLWSLVRDWIGFVGVDTNVL--SDHFVQFVHSTGG-SKASQSFLQLIWLLCAWVLWT 117
Y +W+ + +W+ ++ + + + + +T + + L+ + LL AW +W
Sbjct: 83 YTRRVWAALAEWVTCEQLNPSQWRQTSTVLDWWEATANIQETPKKTLRTLMLLVAWKIWN 142
Query: 118 ERNNMCFNDSIIPIPRLLDKVKYLSLGWL 146
ERN F + LL K+K + W+
Sbjct: 143 ERNRRTFQQKELSATSLLAKIKEEAKTWV 171
>UniRef100_Q5ZCK2 Rust resistance protein Rp1-dp8-like [Oryza sativa]
Length = 1374
Score = 60.1 bits (144), Expect = 2e-08
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
+IW K FAW ++++R+ T L RG +C V E+A HL C
Sbjct: 1230 LIWKPWALRKCKTFAWLVIQNRVWTSDRLSTRGW--PNGSICPLCRRVQETALHLLAGCR 1287
Query: 61 YFALLWSLVRDWIGFVGVDTN---VLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWT 117
Y +W+ + +W + N +S + +T +A + L+ + L W +W
Sbjct: 1288 YTKRIWATLAEWTACNNIHPNHWWQVSSVLEWWDQTTSVKEAPKKALRSLTFLVVWEIWN 1347
Query: 118 ERNNMCFNDSIIPIPRLLDKVK 139
ERN F +P LL K+K
Sbjct: 1348 ERNRRTFQHKELPPSGLLTKIK 1369
>UniRef100_Q65WR1 Putative polyprotein [Oryza sativa]
Length = 1023
Score = 57.0 bits (136), Expect = 2e-07
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
+IW + P K AW ++++R+ T L RG G C E+A HL C
Sbjct: 862 LIWKVWAPGKCKFHAWLIIQNRVWTSDRLATRGW--RNNGHCPLCRCDTETALHLVAMCR 919
Query: 61 YFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKAS-----QSFLQLIWLLCAWVL 115
Y +W LV W G+ ++ + + VH S A+ + L+ + LL W +
Sbjct: 920 YTKRIWRLVATWAGYQQLEPAQWEE--ARSVHQWWESLANTPGIPKKGLRSLILLVVWEI 977
Query: 116 WTERNNMCFNDSIIPIPRLLDKVKYLSLGW 145
W ERN F+ + LL K+K + W
Sbjct: 978 WKERNRRIFDHKEMATGVLLAKIKEEASLW 1007
>UniRef100_Q7X5Z1 OSJNBa0006A01.14 protein [Oryza sativa]
Length = 1189
Score = 56.6 bits (135), Expect = 2e-07
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
+IW + P K AW ++++R+ T L RG G C E+A HL C
Sbjct: 1028 LIWKVWAPGKCKFHAWLIIQNRVWTSDRLATRGW--RNNGHCPLCRCDTETAFHLVAMCR 1085
Query: 61 YFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKAS-----QSFLQLIWLLCAWVL 115
Y +W LV W G+ ++ + + VH S A+ + L+ + LL W +
Sbjct: 1086 YTKRIWRLVATWAGYQQLEPAQWEE--ARSVHQWWESLANTPGIPKKGLRSLILLVVWEI 1143
Query: 116 WTERNNMCFNDSIIPIPRLLDKVKYLSLGW 145
W ERN F+ + LL K+K + W
Sbjct: 1144 WKERNRRIFDHKEMATGVLLAKIKEEASLW 1173
>UniRef100_Q8SAZ6 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
Length = 362
Score = 56.6 bits (135), Expect = 2e-07
Identities = 47/164 (28%), Positives = 71/164 (42%), Gaps = 26/164 (15%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGL-CVSG*GVL-ESAQHLFLSC 59
IW + +K+ VFAW L DR T+ L R L CV G L E+ H+F +C
Sbjct: 207 IWKTKCVIKIKVFAWLLSLDRFNTRDMLDRRHCAKENDDLTCVLCYGDLRETKLHIFFAC 266
Query: 60 SYFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTER 119
Y W L +GF L+ +F Q V + FL+ I+ + AW +W +R
Sbjct: 267 PYSLRCWQL----LGFHW----FLNLNFFQMVVLARNRFGMKGFLE-IFFIAAWYIWKQR 317
Query: 120 NNMCF---------------NDSIIPIPRLLDKVKYLSLGWLKT 148
N M F + ++ + R+ + +K L WL+T
Sbjct: 318 NGMIFQNVPLTFHGWKVQFRKELLLHMCRMKEPLKQLVFDWLQT 361
>UniRef100_Q84Q64 Hypothetical protein OSJNBa0071M09.16 [Oryza sativa]
Length = 1143
Score = 56.2 bits (134), Expect = 3e-07
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
+IW + P K AW ++++R+ T L RG G C E+A HL C
Sbjct: 982 LIWKVWAPGKCKFHAWLIIQNRVWTSDRLATRGW--RNNGHCPLCRCDTETALHLVAMCR 1039
Query: 61 YFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKAS-----QSFLQLIWLLCAWVL 115
Y +W LV W G+ + + + VH S A+ + L+ + LL W +
Sbjct: 1040 YTKRIWRLVATWAGYQQFEPAQWEE--ARSVHQWWESLANTPGIPKKGLRSLILLVVWEI 1097
Query: 116 WTERNNMCFNDSIIPIPRLLDKVKYLSLGW 145
W ERN F+ + LL K+K + W
Sbjct: 1098 WKERNRRIFDHKEMATGVLLAKIKEEASLW 1127
>UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]
Length = 1026
Score = 56.2 bits (134), Expect = 3e-07
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRG--VIPSEAGLCVSG*GVLESAQHLFLSC 59
IW +VPLK+ +F W ++++ TK NL+ RG ++ C +E+ QHLF C
Sbjct: 844 IWKFRVPLKIRIFIWFFTKNKILTKDNLLKRGWRKGDNKCQFC----DKVETVQHLFFDC 899
Query: 60 SYFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTER 119
L+W+++ + V + D F ++ S K +++ + + W +W R
Sbjct: 900 PLARLIWNIIACALNVKPVLSR--QDLFGSWIQSM--DKFTKNLVIVGIAAVLWSIWKCR 955
Query: 120 NNMCFNDSIIPIPRLLDKVKYLSLGWL 146
N CF +P ++ YL+ W+
Sbjct: 956 NKACFERK---LPNDPIELVYLACNWV 979
>UniRef100_Q7XKF8 OSJNBb0065J09.11 protein [Oryza sativa]
Length = 436
Score = 56.2 bits (134), Expect = 3e-07
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
+IW P K + W ++++R+ T L RG G C E+ HL +C
Sbjct: 275 LIWKAWAPGKCKFYVWLIIQNRVWTSDRLAIRGW--QNNGHCPLCRCEAETGLHLVATCR 332
Query: 61 YFALLWSLVRDWIGFVGVDTNVLSD--HFVQFVHSTGGS-KASQSFLQLIWLLCAWVLWT 117
Y +W V W+G+ ++ + + Q+ S + + L+ + LL W +W
Sbjct: 333 YTKRIWHHVAGWVGYHQLEPSQWEEAQSVCQWWESLANTPNIPKKGLRSLILLVVWEIWK 392
Query: 118 ERNNMCFNDSIIPIPRLLDKVKYLSLGW 145
ERN F++ + + LL K+K + W
Sbjct: 393 ERNRRIFDNKEMAVGLLLAKIKEEASVW 420
>UniRef100_Q8LID8 Cyst nematode resistance protein-like protein [Oryza sativa]
Length = 210
Score = 55.1 bits (131), Expect = 7e-07
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEA-GLCVSG*GVLESAQHLFLSCS 60
IW P +V F W R R T NL +G ++ LC+ E HLF++C
Sbjct: 55 IWQTNAPSRVRFFFWLAARGRCQTADNLAKKGWPHEDSCALCMRE---QEDCHHLFVTCE 111
Query: 61 YFALLWSLVRDWIGF-----VGVDTNVLSDHF-VQFVHSTGGSKASQSFLQLIWLLCAWV 114
+ +W L+R WI +D +++ F + TG + + L L+ W+
Sbjct: 112 FSGRVWELMRAWISVDFPIPGQIDCSLIDWWFEARRCFRTGYREIFDAVLMLV----CWL 167
Query: 115 LWTERNNMCFNDSIIPIPRLLDKVK 139
+W ERN F + +L++ +K
Sbjct: 168 IWKERNARIFEQRLRSPEQLVEDIK 192
>UniRef100_Q7XET4 Contains similarity to non-LTR reverse transcriptase [Oryza sativa]
Length = 379
Score = 55.1 bits (131), Expect = 7e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
IW + PLKV FAW L++DRL TK NL + ++P++ +C G E+A HL C +
Sbjct: 266 IWKCKAPLKVKFFAWLLVKDRLSTKKNLHKKTIVPND--ICDICNGATETASHLCFFCPF 323
Query: 62 FALLWSLV 69
W +
Sbjct: 324 AKSFWDKI 331
>UniRef100_Q6AUJ7 Hypothetical protein OSJNBa0052E20.4 [Oryza sativa]
Length = 144
Score = 53.9 bits (128), Expect = 2e-06
Identities = 40/135 (29%), Positives = 57/135 (41%), Gaps = 13/135 (9%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPS-EAGLCVSG*GVLESAQHLFLSCS 60
IW P +V F W + +RLPT NL + IPS LC + E H+FL+
Sbjct: 13 IWKSSAPPRVKFFGWLMTMNRLPTAVNLHKKSTIPSLTCQLCNT---CPEDTDHIFLAYP 69
Query: 61 YFALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERN 120
+ W L++ V + S + +H +G + +LLC W LW RN
Sbjct: 70 LASAFWGLIQ-------VLPMLTSLSEIHTIHWSG--DLPERLNSTFFLLCCWRLWNHRN 120
Query: 121 NMCFNDSIIPIPRLL 135
+ F I RLL
Sbjct: 121 EVVFQLLAPSINRLL 135
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 53.9 bits (128), Expect = 2e-06
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
IW + VP K+ F WR + + L SNL YR + ++ CV E+ HL C +
Sbjct: 1054 IWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKS--CVRCPSHGETVNHLLFKCPF 1111
Query: 62 FALLWSL--VRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTER 119
L W++ + G ++ + H V VH + ++ L + W+L W LW R
Sbjct: 1112 ARLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHAL-IPWIL--WRLWKNR 1168
Query: 120 NNMCFNDSIIPIPRLLDK 137
N++ F P+++ K
Sbjct: 1169 NDLVFKGREFTAPQVILK 1186
>UniRef100_Q7XMF6 OSJNBa0061G20.3 protein [Oryza sativa]
Length = 1463
Score = 53.5 bits (127), Expect = 2e-06
Identities = 40/143 (27%), Positives = 62/143 (42%), Gaps = 9/143 (6%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSE--AGLCVSG*GVLESAQHLFLS 58
+IW P K FAW +L++R+ T L R P+ LC LE AQHLF
Sbjct: 1305 LIWKTWAPSKCKKFAWLVLQNRIWTSDRLQLRQW-PNNYFCQLCYRN---LEMAQHLFKD 1360
Query: 59 CSYFALLWSLVRDWIGF-VGVDTNVLSDHFVQFVHSTGG--SKASQSFLQLIWLLCAWVL 115
C + +W + + + + V + S SK +Q + +L +W +
Sbjct: 1361 CPFTREIWDKIMARMNHNQPFPVHNTDESLVDWWESRTKQQSKCQSKGMQSLHILLSWEI 1420
Query: 116 WTERNNMCFNDSIIPIPRLLDKV 138
W ERN F D + IP+L ++
Sbjct: 1421 WCERNRRVFKDKELQIPQLTARI 1443
>UniRef100_Q6Z0B6 Cyst nematode resistance protein-like protein [Oryza sativa]
Length = 184
Score = 52.8 bits (125), Expect = 4e-06
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCS 60
++W + P KV F W + R T NL RG + CV E HLF+SC
Sbjct: 49 LVWQTKAPSKVRFFLWLATKSRCLTADNLAKRGWPHQDQ--CVLCQRQQEDCLHLFVSCD 106
Query: 61 YFALLWSLVRDWIG----FVGVDTNVLSD 85
Y +W L+RDWI G D L+D
Sbjct: 107 YTKRVWRLLRDWINVDFPLPGQDGETLAD 135
>UniRef100_Q8SA09 Reverse transcriptase-like protein [Oryza sativa]
Length = 727
Score = 52.8 bits (125), Expect = 4e-06
Identities = 41/149 (27%), Positives = 60/149 (39%), Gaps = 8/149 (5%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAGLCVSG*GVLESAQHLFLSCSY 61
IW +Q KV F WRL + LP K N+ R +P LC E+ H FL C
Sbjct: 493 IWSLQCIPKVKQFIWRLAHNSLPLKLNIKRR--VPDAETLCPVCKRFDENGGHCFLQCKP 550
Query: 62 FALLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLCAWVLWTERNN 121
L W ++ + + V + VQ + + + F L WV W RN
Sbjct: 551 MKLCWRILCLEDIRLSLTQLVSARDVVQTILKLENDRRMEVFFLL------WVWWYARNK 604
Query: 122 MCFNDSIIPIPRLLDKVKYLSLGWLKTRK 150
+ + +I + ++ KVK L RK
Sbjct: 605 VNSGEDVIRVEEVVHKVKQLICDHASLRK 633
>UniRef100_Q7XT18 OSJNBb0050O03.4 protein [Oryza sativa]
Length = 1199
Score = 51.6 bits (122), Expect = 8e-06
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 1 MIWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGVIPSEAG-LCVSG*GVLESAQHLFLSC 59
++WH++ P K F W + R T L RG+ AG C LE+A H+ + C
Sbjct: 1022 LLWHVKGPAKCKFFLWFAFQQRCWTADLLQKRGIDSHSAGPFCAQ---ELETANHILIDC 1078
Query: 60 SYFALLWSLVRD---WIGFVGVDTNVLSDHF-------VQFVHSTGGSKASQSFLQLIWL 109
+ +W V W + L D + + +HS F L+ L
Sbjct: 1079 VFTRQVWLRVLSPPGWAALSPPRGSWLQDWWSSSRVCLPEHLHS--------GFDSLV-L 1129
Query: 110 LCAWVLWTERNNMCFNDSIIPIPRLLDKVKYLSLGWLKTRKASFLFGTFSW 160
L +W LW ERN+ F+ ++ + +L+ ++ W AS F SW
Sbjct: 1130 LVSWQLWKERNSKVFDSALASVVVVLESIRSEGQLW---SLASVTFFGISW 1177
>UniRef100_Q94H40 Putative reverse transcriptase [Oryza sativa]
Length = 1185
Score = 51.2 bits (121), Expect = 1e-05
Identities = 35/155 (22%), Positives = 70/155 (44%), Gaps = 11/155 (7%)
Query: 2 IWHIQVPLKVSVFAWRLLRDRLPTKSNLVYRGV-IPSEAGLCVSG*GVLESAQHLFLSCS 60
+W +++P K+ +FAWR+L +P K L + + + +C SG +E +H+ +C
Sbjct: 863 LWKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSG---VEDIKHMVFTCR 919
Query: 61 YFALLWSLVRDWI---GFVGVDTNVLSDHFVQFVHSTGGSKASQSFLQLIWLLC--AWVL 115
L+W + W +G D + V+ + GG + + + + L+ AW +
Sbjct: 920 RAKLIWKQLGIWSRIQPILGFDRS--GSVLVEEMIRKGGKVSHLNAIGMTELILTGAWYI 977
Query: 116 WTERNNMCFNDSIIPIPRLLDKVKYLSLGWLKTRK 150
W ER + + I R + L+ ++ + K
Sbjct: 978 WWERRQLVQGERIQNPARSAMSIATLTTNYMLSNK 1012
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.331 0.143 0.497
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 309,776,220
Number of Sequences: 2790947
Number of extensions: 11777027
Number of successful extensions: 25764
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 25553
Number of HSP's gapped (non-prelim): 179
length of query: 170
length of database: 848,049,833
effective HSP length: 118
effective length of query: 52
effective length of database: 518,718,087
effective search space: 26973340524
effective search space used: 26973340524
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 70 (31.6 bits)
Medicago: description of AC122166.12