BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121245.5 + phase: 0
(72 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6K4D2 Putative ABC transporter [Oryza sativa] 80 2e-14
UniRef100_Q6K376 ABC transporter-like protein [Oryza sativa] 79 4e-14
UniRef100_Q6K4D1 Putative ABC transporter [Oryza sativa] 77 1e-13
UniRef100_Q7XUM2 OSJNBa0074L08.3 protein [Oryza sativa] 67 9e-11
UniRef100_Q7XI02 ABC transporter family protein-like [Oryza sativa] 66 2e-10
UniRef100_Q7EY81 Putative ABC transporter family protein [Oryza ... 66 2e-10
UniRef100_Q75HT8 Putative ATP-dependent transmembrane transporte... 66 3e-10
UniRef100_Q6X4V5 ABC transporter [Gossypium hirsutum] 66 3e-10
UniRef100_Q8RXN0 Putative ABC transporter protein [Arabidopsis t... 65 4e-10
UniRef100_Q8LNT5 Putative ABC transporter [Oryza sativa] 65 4e-10
UniRef100_Q9LMU4 F2H15.7 protein [Arabidopsis thaliana] 65 4e-10
UniRef100_Q8RWI9 Hypothetical protein At3g21090 [Arabidopsis tha... 64 1e-09
UniRef100_Q9LJC3 ABC transporter-like protein [Arabidopsis thali... 64 1e-09
UniRef100_Q8ST66 ABC transporter AbcG18 (Similar to Dictyosteliu... 64 1e-09
UniRef100_Q965D3 ABC transporter mdrA2 [Dictyostelium discoideum] 64 1e-09
UniRef100_Q9C8K2 ATP-dependent transmembrane transporter, putati... 63 2e-09
UniRef100_Q9NGP5 ABC transporter mdrA1 (Similar to Dictyostelium... 63 2e-09
UniRef100_Q8GX48 Putative ATP-dependent transmembrane transporte... 60 1e-08
UniRef100_Q9C8J8 ATP-dependent transmembrane transporter, putati... 59 3e-08
UniRef100_P90746 Hypothetical protein C10C6.5 [Caenorhabditis el... 58 7e-08
>UniRef100_Q6K4D2 Putative ABC transporter [Oryza sativa]
Length = 721
Score = 79.7 bits (195), Expect = 2e-14
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 11 GTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+WV+ + GK+G IL GL GYA+PG++LAIMGPSGCGKSTLLD LAG
Sbjct: 97 GVVLAWEDLWVSA-AGGKSGRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDALAG 152
>UniRef100_Q6K376 ABC transporter-like protein [Oryza sativa]
Length = 525
Score = 78.6 bits (192), Expect = 4e-14
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 5 KEDEVDG-TCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLD 63
+E+ +DG LTW+D+WV + +G + +IL G++G A+PG++LAIMGPSGCGK+TLLD
Sbjct: 83 REERLDGGVFLTWEDVWVTAVDSGGKAA-TILNGVSGSARPGEVLAIMGPSGCGKTTLLD 141
Query: 64 TLAG 67
TLAG
Sbjct: 142 TLAG 145
>UniRef100_Q6K4D1 Putative ABC transporter [Oryza sativa]
Length = 728
Score = 76.6 bits (187), Expect = 1e-13
Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 11 GTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+WV+T + G IL GL GYA+PG++LAIMGPSGCGKSTLLD+LAG
Sbjct: 102 GAVLAWEDLWVST-AGGSRRRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDSLAG 157
>UniRef100_Q7XUM2 OSJNBa0074L08.3 protein [Oryza sativa]
Length = 692
Score = 67.4 bits (163), Expect = 9e-11
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
LTWKD+ V T++ G ++++L LTGYA+PG L A+MGPSG GKSTLLD LAG
Sbjct: 48 LTWKDLSV-TVALGPGKTQTVLDELTGYAEPGSLTALMGPSGSGKSTLLDALAG 100
>UniRef100_Q7XI02 ABC transporter family protein-like [Oryza sativa]
Length = 362
Score = 66.2 bits (160), Expect = 2e-10
Identities = 34/62 (54%), Positives = 45/62 (71%), Gaps = 5/62 (8%)
Query: 11 GTCLTWKDIWVNTISN----GKNGSKS-ILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTL 65
G LTW D+ V + G +G ++ IL GL+GYA+PG++LA+MGPSGCGK+TLLD L
Sbjct: 117 GVFLTWDDLSVTAPAAAAGCGGHGRRAVILDGLSGYARPGEVLALMGPSGCGKTTLLDAL 176
Query: 66 AG 67
AG
Sbjct: 177 AG 178
>UniRef100_Q7EY81 Putative ABC transporter family protein [Oryza sativa]
Length = 729
Score = 66.2 bits (160), Expect = 2e-10
Identities = 34/62 (54%), Positives = 45/62 (71%), Gaps = 5/62 (8%)
Query: 11 GTCLTWKDIWVNTISN----GKNGSKS-ILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTL 65
G LTW D+ V + G +G ++ IL GL+GYA+PG++LA+MGPSGCGK+TLLD L
Sbjct: 117 GVFLTWDDLSVTAPAAAAGCGGHGRRAVILDGLSGYARPGEVLALMGPSGCGKTTLLDAL 176
Query: 66 AG 67
AG
Sbjct: 177 AG 178
>UniRef100_Q75HT8 Putative ATP-dependent transmembrane transporter [Oryza sativa]
Length = 700
Score = 65.9 bits (159), Expect = 3e-10
Identities = 31/60 (51%), Positives = 41/60 (67%)
Query: 8 EVDGTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
E G LTW+++ G +K ++QGL GYA PG+++AIMGPSG GKSTLLD L+G
Sbjct: 32 ESGGASLTWENLTAVLPGGGGRATKKLVQGLYGYAVPGRVVAIMGPSGSGKSTLLDALSG 91
>UniRef100_Q6X4V5 ABC transporter [Gossypium hirsutum]
Length = 705
Score = 65.9 bits (159), Expect = 3e-10
Identities = 39/69 (56%), Positives = 50/69 (71%), Gaps = 7/69 (10%)
Query: 3 REKED-EVDGTC---LTWKDIWVN-TISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCG 57
REK D E+ G LTW+D+ V T+SNG ++ +L+GLTGYA+PG L A+MGPSG G
Sbjct: 37 REKTDTELMGDVSARLTWEDLTVMVTLSNG--ATQKVLEGLTGYAEPGTLTALMGPSGSG 94
Query: 58 KSTLLDTLA 66
KSTLLD L+
Sbjct: 95 KSTLLDALS 103
>UniRef100_Q8RXN0 Putative ABC transporter protein [Arabidopsis thaliana]
Length = 703
Score = 65.1 bits (157), Expect = 4e-10
Identities = 30/53 (56%), Positives = 42/53 (78%), Gaps = 1/53 (1%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
LTW+D+ V ++ G ++++L+GLTGYA+PG L A+MGPSG GKST+LD LA
Sbjct: 50 LTWQDLTV-MVTMGDGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALA 101
>UniRef100_Q8LNT5 Putative ABC transporter [Oryza sativa]
Length = 723
Score = 65.1 bits (157), Expect = 4e-10
Identities = 31/60 (51%), Positives = 41/60 (67%), Gaps = 6/60 (10%)
Query: 14 LTWKDIWVNTISNGKNG------SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
L W+D+ V + G G ++ +LQGLTG+A+PG + A+MGPSG GKSTLLD LAG
Sbjct: 64 LAWRDLTVTVVLGGGGGGGGGGTTQDVLQGLTGHAEPGTITALMGPSGSGKSTLLDALAG 123
>UniRef100_Q9LMU4 F2H15.7 protein [Arabidopsis thaliana]
Length = 659
Score = 65.1 bits (157), Expect = 4e-10
Identities = 30/53 (56%), Positives = 42/53 (78%), Gaps = 1/53 (1%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
LTW+D+ V ++ G ++++L+GLTGYA+PG L A+MGPSG GKST+LD LA
Sbjct: 50 LTWQDLTV-MVTMGDGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALA 101
>UniRef100_Q8RWI9 Hypothetical protein At3g21090 [Arabidopsis thaliana]
Length = 691
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/58 (56%), Positives = 44/58 (74%), Gaps = 2/58 (3%)
Query: 11 GTCLTWKDIWVNTISNGKNG-SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+ V I N +G ++ +LQ L GYA+PG+++AIMGPSG GKSTLLD+LAG
Sbjct: 22 GAYLAWEDLTV-VIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAG 78
>UniRef100_Q9LJC3 ABC transporter-like protein [Arabidopsis thaliana]
Length = 594
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/58 (56%), Positives = 44/58 (74%), Gaps = 2/58 (3%)
Query: 11 GTCLTWKDIWVNTISNGKNG-SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+ V I N +G ++ +LQ L GYA+PG+++AIMGPSG GKSTLLD+LAG
Sbjct: 22 GAYLAWEDLTV-VIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAG 78
>UniRef100_Q8ST66 ABC transporter AbcG18 (Similar to Dictyostelium discoideum (Slime
mold). ABC transporter mdrA2) [Dictyostelium discoideum]
Length = 1476
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 5 KEDEVDGTCLTWKDIW--VNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLL 62
++D G + WKD+ V+ +GKN +L G+ GY KPG L+A+MGPSG GKSTLL
Sbjct: 799 RKDIPIGCYMQWKDLVYEVDVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLL 858
Query: 63 DTLA 66
D LA
Sbjct: 859 DVLA 862
Score = 45.1 bits (105), Expect = 5e-04
Identities = 20/45 (44%), Positives = 32/45 (70%), Gaps = 1/45 (2%)
Query: 22 NTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
+T+ +GKN K IL L + KPG ++ ++G GCGK++L++TLA
Sbjct: 76 STVGHGKN-EKKILTDLNFFLKPGSMVLLLGSPGCGKTSLMNTLA 119
>UniRef100_Q965D3 ABC transporter mdrA2 [Dictyostelium discoideum]
Length = 1476
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 5 KEDEVDGTCLTWKDIW--VNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLL 62
++D G + WKD+ V+ +GKN +L G+ GY KPG L+A+MGPSG GKSTLL
Sbjct: 799 RKDIPIGCYMQWKDLVYEVDVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLL 858
Query: 63 DTLA 66
D LA
Sbjct: 859 DVLA 862
Score = 45.1 bits (105), Expect = 5e-04
Identities = 20/45 (44%), Positives = 32/45 (70%), Gaps = 1/45 (2%)
Query: 22 NTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
+T+ +GKN K IL L + KPG ++ ++G GCGK++L++TLA
Sbjct: 76 STVGHGKN-EKKILTDLNFFLKPGSMVLLLGSPGCGKTSLMNTLA 119
>UniRef100_Q9C8K2 ATP-dependent transmembrane transporter, putative; 39775-42780
[Arabidopsis thaliana]
Length = 687
Score = 62.8 bits (151), Expect = 2e-09
Identities = 32/58 (55%), Positives = 43/58 (73%), Gaps = 2/58 (3%)
Query: 11 GTCLTWKDIWVNTISNGKNG-SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+ V I N G ++ +L GL G+A+PG+++AIMGPSG GKSTLLD+LAG
Sbjct: 21 GAYLAWEDLTV-VIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAG 77
>UniRef100_Q9NGP5 ABC transporter mdrA1 (Similar to Dictyostelium discoideum (Slime
mold). ABC transporter mdrA2) [Dictyostelium discoideum]
Length = 1328
Score = 62.8 bits (151), Expect = 2e-09
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 1 MKREKEDEVDGTCLTWKDIW--VNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGK 58
+K +KE + G + WKD+ V+ +GKN +L + GY KPG LLA+MGPSG GK
Sbjct: 703 VKAQKEIPI-GCYMQWKDLVYEVDVKKDGKNQRLRLLNEINGYVKPGMLLALMGPSGAGK 761
Query: 59 STLLDTLA 66
STLLD LA
Sbjct: 762 STLLDVLA 769
Score = 39.7 bits (91), Expect = 0.020
Identities = 18/59 (30%), Positives = 35/59 (58%)
Query: 8 EVDGTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
E G +T +++ ++ + K ++IL L + KPG ++ I+G GCGK++++ LA
Sbjct: 47 EKKGMYVTARNLSMSIGTEKKGDKRNILSDLNFFLKPGSMVLILGSPGCGKTSVMKALA 105
>UniRef100_Q8GX48 Putative ATP-dependent transmembrane transporter [Arabidopsis
thaliana]
Length = 678
Score = 60.5 bits (145), Expect = 1e-08
Identities = 28/54 (51%), Positives = 38/54 (69%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
+ WKD+ V + G+ +K +L G+ G +P ++LAIMGPSG GKSTLLD LAG
Sbjct: 10 VAWKDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAG 63
>UniRef100_Q9C8J8 ATP-dependent transmembrane transporter, putative; 59412-63615
[Arabidopsis thaliana]
Length = 678
Score = 58.9 bits (141), Expect = 3e-08
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
+ W+D+ V + G+ +K +L G+ G +P ++LAIMGPSG GKSTLLD LAG
Sbjct: 10 VAWEDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAG 63
>UniRef100_P90746 Hypothetical protein C10C6.5 [Caenorhabditis elegans]
Length = 610
Score = 57.8 bits (138), Expect = 7e-08
Identities = 30/63 (47%), Positives = 41/63 (64%), Gaps = 4/63 (6%)
Query: 7 DEVDGTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
+ VD LTW +I ++ +GK IL+ ++G AKPGQLLA+MG SG GK+TLL+ L
Sbjct: 27 EAVDPVTLTWHNISIHAEKSGKQ----ILENVSGIAKPGQLLALMGASGAGKTTLLNMLL 82
Query: 67 GTN 69
N
Sbjct: 83 SRN 85
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.311 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,495,709
Number of Sequences: 2790947
Number of extensions: 4527714
Number of successful extensions: 50587
Number of sequences better than 10.0: 12430
Number of HSP's better than 10.0 without gapping: 11951
Number of HSP's successfully gapped in prelim test: 479
Number of HSP's that attempted gapping in prelim test: 37084
Number of HSP's gapped (non-prelim): 13975
length of query: 72
length of database: 848,049,833
effective HSP length: 48
effective length of query: 24
effective length of database: 714,084,377
effective search space: 17138025048
effective search space used: 17138025048
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC121245.5