Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121241.7 + phase: 0 /pseudo
         (69 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8RWI7 Hypothetical protein At3g14860 [Arabidopsis tha...    38  0.076
UniRef100_Q9LH69 Arabidopsis thaliana genomic DNA, chromosome 3,...    38  0.076
UniRef100_Q9FJ58 Arabidopsis thaliana genomic DNA, chromosome 5,...    35  0.64
UniRef100_Q7RGX5 Putative yir1 protein [Plasmodium yoelii yoelii]      31  7.1
UniRef100_UPI0000316BA7 UPI0000316BA7 UniRef100 entry                  31  9.3
UniRef100_Q67SD5 Putative Fe-S oxidoreductase [Symbiobacterium t...    31  9.3
UniRef100_Q6SZ55 LPXTG anchored putative adhesin [Streptococcus ...    31  9.3

>UniRef100_Q8RWI7 Hypothetical protein At3g14860 [Arabidopsis thaliana]
          Length = 492

 Score = 37.7 bits (86), Expect = 0.076
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 26  TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSKPH 61
           TKEE GWPSF Q++ DL KL+LE  TS ++  +F + P+
Sbjct: 307 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTNPN 345


>UniRef100_Q9LH69 Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2
           [Arabidopsis thaliana]
          Length = 511

 Score = 37.7 bits (86), Expect = 0.076
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)

Query: 26  TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSKPH 61
           TKEE GWPSF Q++ DL KL+LE  TS ++  +F + P+
Sbjct: 326 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTNPN 364


>UniRef100_Q9FJ58 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTE17
           [Arabidopsis thaliana]
          Length = 439

 Score = 34.7 bits (78), Expect = 0.64
 Identities = 23/72 (31%), Positives = 37/72 (50%), Gaps = 6/72 (8%)

Query: 4   QPSERDFKGEASSDKSKSTLERTKEETGWPSFRQ-VVDLLKLSLEEFTSSILKF-----M 57
           Q SE +  GE S +K+  ++   K E      +Q +VD+   S+++FT S+ K      +
Sbjct: 345 QESESEASGETSEEKTVKSVLTVKVEPESKVVQQDIVDMYMKSMQQFTDSLAKMKLPLDI 404

Query: 58  SKPHTTERSSSD 69
             P  +E SSSD
Sbjct: 405 DSPTKSENSSSD 416


>UniRef100_Q7RGX5 Putative yir1 protein [Plasmodium yoelii yoelii]
          Length = 313

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 17  DKSKSTLERTKEETGWPSFRQVV----DLLKLSLEEFTS--SILKFMSKPHT 62
           D  K    + KE+TG+ +F++++    DLL +  E+ +      KF+ K HT
Sbjct: 123 DNGKDCNSKFKEKTGYNNFKEIIDKRKDLLNIKFEDISKLYDAFKFLCKMHT 174


>UniRef100_UPI0000316BA7 UPI0000316BA7 UniRef100 entry
          Length = 181

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 10/79 (12%)

Query: 1   MLQQPSERDFKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSS-------- 52
           ML++P     K EA+ ++  STL   +     P+ +++++   L  ++  SS        
Sbjct: 85  MLKKPVTEKTKKEATKEEIVSTLNNGESSKLSPAVKKLINENDLDSDKIISSRSDGRLTK 144

Query: 53  --ILKFMSKPHTTERSSSD 69
             +  FM+ P TT+++S +
Sbjct: 145 SDVFDFMNNPSTTDKTSKE 163


>UniRef100_Q67SD5 Putative Fe-S oxidoreductase [Symbiobacterium thermophilum]
          Length = 636

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 21/62 (33%), Positives = 30/62 (47%), Gaps = 9/62 (14%)

Query: 1   MLQQPSERDFKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSKP 60
           +L  P+E D   EA ++K +  LE  +EE G    R+V           T S+  F+ KP
Sbjct: 413 ILGLPTETDADLEAIAEKGRWALEIAEEELGRQEARKV---------RVTISVSVFVPKP 463

Query: 61  HT 62
           HT
Sbjct: 464 HT 465


>UniRef100_Q6SZ55 LPXTG anchored putative adhesin [Streptococcus pyogenes]
          Length = 1123

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 20/67 (29%), Positives = 35/67 (51%), Gaps = 2/67 (2%)

Query: 3   QQPSERDFKGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSKPHT 62
           ++ SE+  + +A+ + +K  LE  K+E  +     +V+  K  LE+F   I K   K  T
Sbjct: 157 KESSEKVTELKANLESAKKDLE--KKEADYVKENALVERDKKDLEKFEKEIAKAREKKQT 214

Query: 63  TERSSSD 69
           TE++  D
Sbjct: 215 TEKAIKD 221


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.306    0.122    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,912,267
Number of Sequences: 2790947
Number of extensions: 2629898
Number of successful extensions: 7448
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7448
Number of HSP's gapped (non-prelim): 7
length of query: 69
length of database: 848,049,833
effective HSP length: 45
effective length of query: 24
effective length of database: 722,457,218
effective search space: 17338973232
effective search space used: 17338973232
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 68 (30.8 bits)


Medicago: description of AC121241.7