Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121238.3 - phase: 0 /pseudo
         (423 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_O81532 Mariner transposase [Glycine max]                     47  0.001
UniRef100_Q8S6E0 Putative transposase [Oryza sativa]                   38  0.48
UniRef100_Q6L4T5 Hypothetical protein P0478F09.8 [Oryza sativa]        35  3.1
UniRef100_UPI000046CDD7 UPI000046CDD7 UniRef100 entry                  35  5.3
UniRef100_UPI00003ADC04 UPI00003ADC04 UniRef100 entry                  34  9.0
UniRef100_UPI00003ADC03 UPI00003ADC03 UniRef100 entry                  34  9.0
UniRef100_UPI00003ADC02 UPI00003ADC02 UniRef100 entry                  34  9.0
UniRef100_UPI00003ADC01 UPI00003ADC01 UniRef100 entry                  34  9.0
UniRef100_UPI00003ADC00 UPI00003ADC00 UniRef100 entry                  34  9.0
UniRef100_Q8IBK4 Hypothetical protein MAL7P1.134 [Plasmodium fal...    34  9.0

>UniRef100_O81532 Mariner transposase [Glycine max]
          Length = 425

 Score = 46.6 bits (109), Expect = 0.001
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 2  KRKRTFLDNYQRQNICEVLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWR--QKIETG 59
          +RK   L N +R  I ++L+  S   K+ +GV + ++SS+ V    I  IW+  ++ ET 
Sbjct: 2  QRKVKMLSNEERITIYQLLLQKSVDGKLPQGVKESVASSFSVCRKTIDRIWKRAKESETH 61

Query: 60 DVCHKKTK-CGRKK 72
          DV HKKTK  GRK+
Sbjct: 62 DVSHKKTKNSGRKR 75


>UniRef100_Q8S6E0 Putative transposase [Oryza sativa]
          Length = 565

 Score = 38.1 bits (87), Expect = 0.48
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%)

Query: 8   LDNYQRQNICEVLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQK-------IETGD 60
           L N QRQ I E+L+  S   K+ K   + ++  + VS+  +  IW++        ++   
Sbjct: 144 LTNTQRQRIYELLLAKSKDGKLEKDTTRAVAQVFNVSIRTVQRIWKRAKLCIAHGVQVNV 203

Query: 61  VCHKKTKCGRKK 72
              K   CGRKK
Sbjct: 204 DSRKCYNCGRKK 215


>UniRef100_Q6L4T5 Hypothetical protein P0478F09.8 [Oryza sativa]
          Length = 572

 Score = 35.4 bits (80), Expect = 3.1
 Identities = 15/58 (25%), Positives = 31/58 (52%), Gaps = 4/58 (6%)

Query: 8   LDNYQRQNICEVLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIETGDVCHKK 65
           L N QR+ I ++L+  S   K+ K   + ++  + VS+  +  IW++      +CH++
Sbjct: 151 LTNIQRRGIYQLLLQKSKDGKLEKHTTRLVAQEFHVSIRTVQRIWKR----AKICHEQ 204


>UniRef100_UPI000046CDD7 UPI000046CDD7 UniRef100 entry
          Length = 178

 Score = 34.7 bits (78), Expect = 5.3
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 24/110 (21%)

Query: 19  VLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIETGDVCHKKTKCGRKK------ 72
           +L++ S   KI+   +K +     +++D  Y ++   +   +  H K K  + K      
Sbjct: 74  ILLDGSLNAKISDFGIKEIEQCLDINIDYSYIVFPNNVIKFNNKHFKNKIKKIKIVNKGS 133

Query: 73  ---------KSHRYRKNT*--NTATQT*QSSISSRSIRVYHWTTNEVNKK 111
                    K+H Y+ NT   N ++ T  SS       V+ WT+ EVNKK
Sbjct: 134 EDMLHVFSSKNHIYKYNTREINVSSNTHNSS-------VFFWTSPEVNKK 176


>UniRef100_UPI00003ADC04 UPI00003ADC04 UniRef100 entry
          Length = 917

 Score = 33.9 bits (76), Expect = 9.0
 Identities = 18/61 (29%), Positives = 33/61 (53%), Gaps = 3/61 (4%)

Query: 19  VLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIETGDVCHKKTKCGRKKKSHRYR 78
           V +  SSG+K++ G + RL ++ ++ +   + +   + E  D C    +C RKK   R+R
Sbjct: 455 VNLTCSSGKKVH-GALSRLPATREIFITADFELETNQKEVTDTCD--VRCARKKTEKRFR 511

Query: 79  K 79
           K
Sbjct: 512 K 512


>UniRef100_UPI00003ADC03 UPI00003ADC03 UniRef100 entry
          Length = 911

 Score = 33.9 bits (76), Expect = 9.0
 Identities = 18/61 (29%), Positives = 33/61 (53%), Gaps = 3/61 (4%)

Query: 19  VLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIETGDVCHKKTKCGRKKKSHRYR 78
           V +  SSG+K++ G + RL ++ ++ +   + +   + E  D C    +C RKK   R+R
Sbjct: 500 VNLTCSSGKKVH-GALSRLPATREIFITADFELETNQKEVTDTCD--VRCARKKTEKRFR 556

Query: 79  K 79
           K
Sbjct: 557 K 557


>UniRef100_UPI00003ADC02 UPI00003ADC02 UniRef100 entry
          Length = 945

 Score = 33.9 bits (76), Expect = 9.0
 Identities = 18/61 (29%), Positives = 33/61 (53%), Gaps = 3/61 (4%)

Query: 19  VLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIETGDVCHKKTKCGRKKKSHRYR 78
           V +  SSG+K++ G + RL ++ ++ +   + +   + E  D C    +C RKK   R+R
Sbjct: 471 VNLTCSSGKKVH-GALSRLPATREIFITADFELETNQKEVTDTCD--VRCARKKTEKRFR 527

Query: 79  K 79
           K
Sbjct: 528 K 528


>UniRef100_UPI00003ADC01 UPI00003ADC01 UniRef100 entry
          Length = 951

 Score = 33.9 bits (76), Expect = 9.0
 Identities = 18/61 (29%), Positives = 33/61 (53%), Gaps = 3/61 (4%)

Query: 19  VLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIETGDVCHKKTKCGRKKKSHRYR 78
           V +  SSG+K++ G + RL ++ ++ +   + +   + E  D C    +C RKK   R+R
Sbjct: 476 VNLTCSSGKKVH-GALSRLPATREIFITADFELETNQKEVTDTCD--VRCARKKTEKRFR 532

Query: 79  K 79
           K
Sbjct: 533 K 533


>UniRef100_UPI00003ADC00 UPI00003ADC00 UniRef100 entry
          Length = 875

 Score = 33.9 bits (76), Expect = 9.0
 Identities = 18/61 (29%), Positives = 33/61 (53%), Gaps = 3/61 (4%)

Query: 19  VLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIETGDVCHKKTKCGRKKKSHRYR 78
           V +  SSG+K++ G + RL ++ ++ +   + +   + E  D C    +C RKK   R+R
Sbjct: 435 VNLTCSSGKKVH-GALSRLPATREIFITADFELETNQKEVTDTCD--VRCARKKTEKRFR 491

Query: 79  K 79
           K
Sbjct: 492 K 492


>UniRef100_Q8IBK4 Hypothetical protein MAL7P1.134 [Plasmodium falciparum]
          Length = 3351

 Score = 33.9 bits (76), Expect = 9.0
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 11/75 (14%)

Query: 7    FLDNYQRQNICEVLINSSSGRKINKGVVKRLSSSYQVSVDVIYAIWRQKIET-----GDV 61
            F D Y R+NI     NS   + INK ++KR  +   +   ++  + R  I        DV
Sbjct: 1174 FYDAYDRENI-----NSKYVKVINKYIIKRNKNFVLIKKRIMNLMKRDNIHIRGYLRDDV 1228

Query: 62   CHKKTKCGRKKKSHR 76
               K KC +KKK HR
Sbjct: 1229 LRNK-KCHKKKKDHR 1242


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.372    0.162    0.611 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 508,181,515
Number of Sequences: 2790947
Number of extensions: 15789127
Number of successful extensions: 82129
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 82124
Number of HSP's gapped (non-prelim): 13
length of query: 423
length of database: 848,049,833
effective HSP length: 130
effective length of query: 293
effective length of database: 485,226,723
effective search space: 142171429839
effective search space used: 142171429839
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.9 bits)
S2: 76 (33.9 bits)


Medicago: description of AC121238.3