BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149600.1 - phase: 0
(494 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 360 5e-99
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 335 2e-91
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 193 1e-48
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 162 1e-39
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 139 2e-32
YME4_YEAST (Q04711) Transposon Ty1 protein B 104 6e-22
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 104 6e-22
YMU0_YEAST (Q04670) Transposon Ty1 protein B 102 2e-21
YMD9_YEAST (Q03434) Transposon Ty1 protein B 102 3e-21
YMT5_YEAST (Q04214) Transposon Ty1 protein B 100 7e-21
YJZ7_YEAST (P47098) Transposon Ty1 protein B 99 2e-20
YJZ9_YEAST (P47100) Transposon Ty1 protein B 98 4e-20
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 86 2e-16
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 77 1e-13
POL_FMVD (P09523) Enzymatic polyprotein [Contains: Aspartic prot... 36 0.20
ENGC_STAAW (P67683) Probable GTPase engC (EC 3.6.1.-) 35 0.44
ENGC_STAAN (P67682) Probable GTPase engC (EC 3.6.1.-) 35 0.44
ENGC_STAAM (P67681) Probable GTPase engC (EC 3.6.1.-) 35 0.44
ENGC_STAAC (Q9KX08) Probable GTPase engC (EC 3.6.1.-) 35 0.44
VRK1_MOUSE (Q80X41) Serine/threonine-protein kinase VRK1 (EC 2.7... 33 1.3
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 360 bits (924), Expect = 5e-99
Identities = 202/499 (40%), Positives = 306/499 (60%), Gaps = 15/499 (3%)
Query: 1 MVEEMTTLKKNNTWDLVTLPRGKKTVGCRWVFTIKHKADGTIDRYKARLVAKGYTQSYGV 60
M EEM +L+KN T+ LV LP+GK+ + C+WVF +K D + RYKARLV KG+ Q G+
Sbjct: 830 MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGI 889
Query: 61 DYQETFAPVAKLNTVRILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPGM-VYSN 119
D+ E F+PV K+ ++R +LSLAA+ D + Q DVK AFLHG++ E+IYM+ P G V
Sbjct: 890 DFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK 949
Query: 120 GLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKR-GEGKITALIIYV 178
VCKL K+LYGLKQ+PR W+ +F MK+ Y + SD ++ KR E L++YV
Sbjct: 950 KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYV 1009
Query: 179 DDMIVTGNNQDEISSLQKYLTSKFEMKQLGNLKYFMGIEVARSK--HGIFLCQRKYTLDL 236
DDM++ G ++ I+ L+ L+ F+MK LG + +G+++ R + ++L Q KY +
Sbjct: 1010 DDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERV 1069
Query: 237 LSETGLLASKSAETPIEQNHKLFHCL-NSNITDKGR-----YQSLVGKLIY-LSHTRPDI 289
L + +K TP+ + KL + + + +KG Y S VG L+Y + TRPDI
Sbjct: 1070 LERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDI 1129
Query: 290 TYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFSNNGHLRVEGYTDADWAGSAD 349
+AV VVS+F+ +P K H + V+ ILRYL+ T G + F + + ++GYTDAD AG D
Sbjct: 1130 AHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDID 1188
Query: 350 DRRSTSGY-FTFVGGNLVTWRSKKQPVVARSSAEVEFRGMALGMCELLWVKSVLSDLGFE 408
+R+S++GY FTF GG ++W+SK Q VA S+ E E+ E++W+K L +LG
Sbjct: 1189 NRKSSTGYLFTFSGG-AISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH 1247
Query: 409 PKEAMSLYCDNTSAIEIAHNPVQHDRTKHVEIDRHFIKEKLDAGTIVFPFVRSEQQLADM 468
KE + +YCD+ SAI+++ N + H RTKH+++ H+I+E +D ++ + + + ADM
Sbjct: 1248 QKEYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADM 1306
Query: 469 LTKGVSSKVFNESLLKLGM 487
LTK V F +GM
Sbjct: 1307 LTKVVPRNKFELCKELVGM 1325
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 335 bits (859), Expect = 2e-91
Identities = 182/490 (37%), Positives = 284/490 (57%), Gaps = 8/490 (1%)
Query: 4 EMTTLKKNNTWDLVTLPRGKKTVGCRWVFTIKHKADGTIDRYKARLVAKGYTQSYGVDYQ 63
E+ K NNTW + P K V RWVF++K+ G RYKARLVA+G+TQ Y +DY+
Sbjct: 913 ELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYE 972
Query: 64 ETFAPVAKLNTVRILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPGMVYSNGLKV 123
ETFAPVA++++ R +LSL + + Q DVK AFL+G + E+IYM P G + N V
Sbjct: 973 ETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG-ISCNSDNV 1031
Query: 124 CKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFL--KRGEGKITALIIYVDDM 181
CKL KA+YGLKQ+ R WF F +++K + S+ D +++ K + +++YVDD+
Sbjct: 1032 CKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDV 1091
Query: 182 IVTGNNQDEISSLQKYLTSKFEMKQLGNLKYFMGIEVARSKHGIFLCQRKYTLDLLSETG 241
++ + +++ ++YL KF M L +K+F+GI + + I+L Q Y +LS+
Sbjct: 1092 VIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFN 1151
Query: 242 LLASKSAETPIEQNHKLFHCLNSNITDKGRYQSLVGKLIYLS-HTRPDITYAVNVVSQFM 300
+ + TP+ + LNS+ +SL+G L+Y+ TRPD+T AVN++S++
Sbjct: 1152 MENCNAVSTPLPSKIN-YELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYS 1210
Query: 301 HDPRKPHMDVVERILRYLKSTPGKGILFSNN--GHLRVEGYTDADWAGSADDRRSTSGY- 357
++R+LRYLK T ++F N ++ GY D+DWAGS DR+ST+GY
Sbjct: 1211 SKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYL 1270
Query: 358 FTFVGGNLVTWRSKKQPVVARSSAEVEFRGMALGMCELLWVKSVLSDLGFEPKEAMSLYC 417
F NL+ W +K+Q VA SS E E+ + + E LW+K +L+ + + + + +Y
Sbjct: 1271 FKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYE 1330
Query: 418 DNTSAIEIAHNPVQHDRTKHVEIDRHFIKEKLDAGTIVFPFVRSEQQLADMLTKGVSSKV 477
DN I IA+NP H R KH++I HF +E++ I ++ +E QLAD+ TK + +
Sbjct: 1331 DNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAAR 1390
Query: 478 FNESLLKLGM 487
F E KLG+
Sbjct: 1391 FVELRDKLGL 1400
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 193 bits (490), Expect = 1e-48
Identities = 96/229 (41%), Positives = 145/229 (62%), Gaps = 11/229 (4%)
Query: 174 LIIYVDDMIVTGNNQDEISSLQKYLTSKFEMKQLGNLKYFMGIEVARSKHGIFLCQRKYT 233
L++YVDD+++TG++ ++ L L+S F MK LG + YF+GI++ G+FL Q KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 234 LDLLSETGLLASKSAETPIEQNHKLFHCLNSNIT-----DKGRYQSLVGKLIYLSHTRPD 288
+L+ G+L K TP+ LNS+++ D ++S+VG L YL+ TRPD
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLK------LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPD 116
Query: 289 ITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFSNNGHLRVEGYTDADWAGSA 348
I+YAVN+V Q MH+P D+++R+LRY+K T G+ N L V+ + D+DWAG
Sbjct: 117 ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCT 176
Query: 349 DDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEVEFRGMALGMCELLW 397
RRST+G+ TF+G N+++W +K+QP V+RSS E E+R +AL EL W
Sbjct: 177 STRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 162 bits (411), Expect = 1e-39
Identities = 96/297 (32%), Positives = 158/297 (52%), Gaps = 4/297 (1%)
Query: 93 DVKNAFLHGEISEDIYMDTPPGMVYS-NGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTF 151
DV AFL+ + E IY+ PPG V N V +L +YGLKQ+P W ++K
Sbjct: 2 DVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKI 61
Query: 152 GYKASNSDHTLFLKRGEGKITALIIYVDDMIVTGNNQDEISSLQKYLTSKFEMKQLGNLK 211
G+ +H L+ + + +YVDD++V + +++ LT + MK LG +
Sbjct: 62 GFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVD 121
Query: 212 YFMGIEVARSKHG-IFLCQRKYTLDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKG 270
F+G+ + +S +G I L + Y SE+ + K +TP+ + LF + ++ D
Sbjct: 122 KFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDIT 181
Query: 271 RYQSLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFS 329
YQS+VG+L++ ++T RPDI+Y V+++S+F+ +PR H++ R+LRYL +T + +
Sbjct: 182 PYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYR 241
Query: 330 NNGHLRVEGYTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKK-QPVVARSSAEVEF 385
+ + + Y DA D ST GY T + G VTW SKK + V+ S E E+
Sbjct: 242 SGSQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEY 298
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 139 bits (349), Expect = 2e-32
Identities = 128/466 (27%), Positives = 204/466 (43%), Gaps = 53/466 (11%)
Query: 45 YKARLVAKGYTQSYGVDYQETFAPVAKLNTVRILLSLAANQDWPLLQFDVKNAFLHGEIS 104
YKAR+V +G TQS Y N ++I L +A N++ + D+ +AFL+ ++
Sbjct: 1337 YKARIVCRGDTQSPDT-YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLE 1395
Query: 105 EDIYMDTPPGMVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFL 164
E+IY+ P + V KL KALYGLKQSP+ W + + G K ++ +T L
Sbjct: 1396 EEIYIPHP-----HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLK--DNSYTPGL 1448
Query: 165 KRGEGKITALIIYVDDMIVTGNNQDEISSLQKYLTSKFEMKQLGNL------KYFMGIEV 218
+ E K + +YVDD ++ +N+ + L S FE+K G L +G+++
Sbjct: 1449 YQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDL 1508
Query: 219 ARSKHGIFLCQRKYTLDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKGRY------ 272
+K R T+DL L S + N +L S+I Y
Sbjct: 1509 VYNK-------RLGTIDL-----TLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKK 1556
Query: 273 -----------------QSLVGKLIYLSH-TRPDITYAVNVVSQFMHDPRKPHMDVVERI 314
Q L+G+L Y+ H R DI +AV V++ ++ P + ++ +I
Sbjct: 1557 DVLQMSEEEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKI 1616
Query: 315 LRYLKSTPGKGILFSN--NGHLRVEGYTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKK 372
++YL GI + N +V TDA GS D +S G + G N+ S K
Sbjct: 1617 IQYLVRYKDIGIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIGVILWYGMNIFNVYSNK 1675
Query: 373 QPVVARSSAEVEFRGMALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIEIAHNPVQH 432
SS E E + G + +K L +LG + + D+ AI+ + Q
Sbjct: 1676 STNRCVSSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQ 1735
Query: 433 DRTKHVEIDRHFIKEKLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
+ K I IKEK+ +I + + +AD+LTK VS+ F
Sbjct: 1736 PKEKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDF 1781
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 104 bits (259), Expect = 6e-22
Identities = 117/511 (22%), Positives = 233/511 (44%), Gaps = 55/511 (10%)
Query: 3 EEMTTLKKNNTWDLVTLPRGKKTVGCRWV---FTIKHKADGTIDRYKARLVAKGYTQSYG 59
+E+ L K NTWD K+ R + F K DGT +KAR VA+G
Sbjct: 829 KEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGT---HKARFVARG-----D 880
Query: 60 VDYQETFAPVAKLNTVR-----ILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPG 114
+ + +T+ + NTV LSLA + ++ + Q D+ +A+L+ +I E++Y+ PP
Sbjct: 881 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 940
Query: 115 MVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKRG-----EG 169
+ ++ K+ +LKK+LYGLKQS W+ +++K++ K + RG +
Sbjct: 941 LGMND--KLIRLKKSLYGLKQSGANWY----ETIKSYLIKQCGMEEV----RGWSCVFKN 990
Query: 170 KITALIIYVDDMIVTGN----NQDEISSLQK-YLTSKFEMKQLGN-LKY-FMGIEV--AR 220
+ ++VDDMI+ N+ I++L+K Y T + + N ++Y +G+E+ R
Sbjct: 991 SQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQR 1050
Query: 221 SKHGIFLCQRKYTLDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKGRY-------Q 273
K+ + T + L K + L+ + D+ Y Q
Sbjct: 1051 GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQ 1110
Query: 274 SLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFSNNG 332
L+G Y+ + R D+ Y +N ++Q + P + +D+ +++++ T K +++ N
Sbjct: 1111 KLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNK 1170
Query: 333 HL----RVEGYTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEVEFRGM 388
++ +DA + G+ +S G + G ++ +S K + S+ E E +
Sbjct: 1171 PTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAI 1229
Query: 389 ALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIE-IAHNPVQHDRTKHVEIDRHFIKE 447
+ + L + ++ +L +P L D+ S I I N + R + +++
Sbjct: 1230 SESVPLLNNLSHLVQELNKKP-ITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRD 1288
Query: 448 KLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
++ + ++ +++ +AD++TK + K F
Sbjct: 1289 EVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1319
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 104 bits (259), Expect = 6e-22
Identities = 117/515 (22%), Positives = 238/515 (45%), Gaps = 63/515 (12%)
Query: 3 EEMTTLKKNNTWDLVTLPRG-----KKTVGCRWVFTIKHKADGTIDRYKARLVAKGYTQS 57
+E++ L K NTWD KK + ++F K DGT +KAR VA+G
Sbjct: 1271 KEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFN--KKRDGT---HKARFVARG---- 1321
Query: 58 YGVDYQETFAPVAKLNTVR-----ILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTP 112
+ + +T+ + NTV LS+A + D+ + Q D+ +A+L+ +I E++Y+ P
Sbjct: 1322 -DIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPP 1380
Query: 113 PGMVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKRG----- 167
P + ++ K+ +L+K+LYGLKQS W+ +++K++ + RG
Sbjct: 1381 PHLGLND--KLLRLRKSLYGLKQSGANWY----ETIKSYLINCCDMQEV----RGWSCVF 1430
Query: 168 EGKITALIIYVDDMIVTGN----NQDEISSLQK-YLTSKFEMKQLGN-LKY-FMGIEV-- 218
+ + ++VDDMI+ N+ I++L+K Y T + + N ++Y +G+E+
Sbjct: 1431 KNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKY 1490
Query: 219 ARSKHGIFLCQRKYT--LDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKGRY---- 272
RSK+ ++ T L L+ K P + H + + D+ Y
Sbjct: 1491 QRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQ--DELEIDEDEYKEKV 1548
Query: 273 ---QSLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILF 328
Q L+G Y+ + R D+ Y +N ++Q + P + +D+ +++++ T K +++
Sbjct: 1549 HEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIW 1608
Query: 329 SNNGHLRVE----GYTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEVE 384
N + + +DA + G+ +S G + G ++ +S K + S+ E E
Sbjct: 1609 HKNKPTKPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAE 1667
Query: 385 FRGMALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIEIAHNPVQHD-RTKHVEIDRH 443
++ + L + ++ +L +P L D+ S I I + + R +
Sbjct: 1668 IHAVSEAIPLLNNLSHLVQELNKKP-IIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAM 1726
Query: 444 FIKEKLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
+++++ + ++ +++ +AD++TK + K F
Sbjct: 1727 RLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTF 1761
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 102 bits (254), Expect = 2e-21
Identities = 116/511 (22%), Positives = 235/511 (45%), Gaps = 55/511 (10%)
Query: 3 EEMTTLKKNNTWDLVTLPRGKKTVGCRWV---FTIKHKADGTIDRYKARLVAKGYTQSYG 59
+E+ L K TWD K+ R + F K DGT +KAR VA+G
Sbjct: 829 KEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGT---HKARFVARG-----D 880
Query: 60 VDYQETFAPVAKLNTVR-----ILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPG 114
+ + +T+ P + NTV LSLA + ++ + Q D+ +A+L+ +I E++Y+ PP
Sbjct: 881 IQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 940
Query: 115 MVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKRG-----EG 169
+ ++ K+ +LKK+LYGLKQS W+ +++K++ K + RG +
Sbjct: 941 LGMND--KLIRLKKSLYGLKQSGANWY----ETIKSYLIKQCGMEEV----RGWSCVFKN 990
Query: 170 KITALIIYVDDMIVTGN----NQDEISSLQK-YLTSKFEMKQLGN-LKY-FMGIEV--AR 220
+ ++VDDMI+ N+ I++L+K Y T + + N ++Y +G+E+ R
Sbjct: 991 SQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQR 1050
Query: 221 SKHGIFLCQRKYTLDL------LSETGLLASKSAETPIEQNHKLFHCLNSNITDK-GRYQ 273
K+ + T + L+ G S + + + + + K Q
Sbjct: 1051 GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQ 1110
Query: 274 SLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFSNNG 332
L+G Y+ + R D+ Y +N ++Q + P K +D+ +++++ +T K +++ +
Sbjct: 1111 KLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSK 1170
Query: 333 HLRVEG----YTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEVEFRGM 388
++ +DA + G+ +S G + G ++ +S K + S+ E E +
Sbjct: 1171 PVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAI 1229
Query: 389 ALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIE-IAHNPVQHDRTKHVEIDRHFIKE 447
+ + L + ++ +L +P L D+ S I I N + R + +++
Sbjct: 1230 SESVPLLNNLSHLVQELNKKP-ITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRD 1288
Query: 448 KLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
++ + ++ +++ +AD++TK + K F
Sbjct: 1289 EVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1319
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 102 bits (253), Expect = 3e-21
Identities = 115/511 (22%), Positives = 232/511 (44%), Gaps = 55/511 (10%)
Query: 3 EEMTTLKKNNTWDLVTLPRGKKTVGCRWV---FTIKHKADGTIDRYKARLVAKGYTQSYG 59
+E+ L K TWD K+ R + F K DGT +KAR VA+G
Sbjct: 829 KEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARG-----D 880
Query: 60 VDYQETFAPVAKLNTVR-----ILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPG 114
+ + +T+ + NTV LSLA + ++ + Q D+ +A+L+ +I E++Y+ PP
Sbjct: 881 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 940
Query: 115 MVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKRG-----EG 169
+ ++ K+ +LKK+LYGLKQS W+ +++K++ K + RG +
Sbjct: 941 LGMND--KLIRLKKSLYGLKQSGANWY----ETIKSYLIKQCGMEEV----RGWSCVFKN 990
Query: 170 KITALIIYVDDMIVTGN----NQDEISSLQK-YLTSKFEMKQLGN-LKY-FMGIEV--AR 220
+ ++VDDMI+ N+ I++L+K Y T + + N ++Y +G+E+ R
Sbjct: 991 SQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQR 1050
Query: 221 SKHGIFLCQRKYTLDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKGRY-------Q 273
K+ + T + L K + L+ + D+ Y Q
Sbjct: 1051 GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQ 1110
Query: 274 SLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFSNNG 332
L+G Y+ + R D+ Y +N ++Q + P + +D+ +++++ T K +++ N
Sbjct: 1111 KLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNK 1170
Query: 333 HL----RVEGYTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEVEFRGM 388
++ +DA + G+ +S G + G ++ +S K + S+ E E +
Sbjct: 1171 PTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAI 1229
Query: 389 ALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIEIAHNPVQHD-RTKHVEIDRHFIKE 447
+ + L + ++ +L +P L D+ S I I + + R + +++
Sbjct: 1230 SESVPLLNNLSYLIQELNKKP-IIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRD 1288
Query: 448 KLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
++ + ++ +++ +AD++TK + K F
Sbjct: 1289 EVSGNNLYVYYIETKKNIADVMTKPLPIKTF 1319
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 100 bits (250), Expect = 7e-21
Identities = 113/525 (21%), Positives = 227/525 (42%), Gaps = 83/525 (15%)
Query: 3 EEMTTLKKNNTWDLVTLPRGKKTVGCRWV---FTIKHKADGTIDRYKARLVAKGYTQSYG 59
+E+ L K TWD K+ R + F K DGT +KAR VA+G
Sbjct: 829 KEVNQLLKMKTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGT---HKARFVARG-----D 880
Query: 60 VDYQETFAPVAKLNTVR-----ILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPG 114
+ + +T+ + NTV LSLA + ++ + Q D+ +A+L+ +I E++Y+ PP
Sbjct: 881 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 940
Query: 115 MVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKRG-----EG 169
+ ++ K+ +LKK+LYGLKQS W+ +++K++ K + RG E
Sbjct: 941 LGMND--KLIRLKKSLYGLKQSGANWY----ETIKSYLIKQCGMEEV----RGWSCVFEN 990
Query: 170 KITALIIYVDDMIVTGNNQDEISSLQKYLTSKFEMKQLGNLKYFMGIEVARSKHGIFLCQ 229
+ ++VDDM++ N + + L +++ K + +G ++ I +
Sbjct: 991 SQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIIN-----LGESDEEIQYDILGLE 1045
Query: 230 RKYTLDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKGR------------------ 271
KY + G+ S + + P LN + KGR
Sbjct: 1046 IKYQRGKYMKLGMENSLTEKIP---------KLNVPLNPKGRKLSAPGQPGLYIDQQELE 1096
Query: 272 ------------YQSLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYL 318
Q L+G Y+ + R D+ Y +N ++Q + P K +D+ +++++
Sbjct: 1097 LEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFI 1156
Query: 319 KSTPGKGILFSNNGHLRVEG----YTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQP 374
+T K +++ + ++ +DA + G+ +S G + G ++ +S K
Sbjct: 1157 WNTRDKQLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKAS 1215
Query: 375 VVARSSAEVEFRGMALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIE-IAHNPVQHD 433
+ S+ E E ++ + L + ++ +L +P L D+ S I I N +
Sbjct: 1216 LTCTSTTEAEIHAISESVPLLNNLSYLIQELDKKP-ITKGLLTDSKSTISIIISNNEEKF 1274
Query: 434 RTKHVEIDRHFIKEKLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
R + +++++ + ++ +++ +AD++TK + K F
Sbjct: 1275 RNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1319
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 99.4 bits (246), Expect = 2e-20
Identities = 114/511 (22%), Positives = 231/511 (44%), Gaps = 55/511 (10%)
Query: 3 EEMTTLKKNNTWDLVTLPRGKKTVGCRWV---FTIKHKADGTIDRYKARLVAKGYTQSYG 59
+E+ L K TWD K+ R + F K DGT +KAR VA+G
Sbjct: 1256 KEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARG-----D 1307
Query: 60 VDYQETFAPVAKLNTVR-----ILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPG 114
+ + +T+ + NTV LSLA + ++ + Q D+ +A+L+ +I E++Y+ PP
Sbjct: 1308 IQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 1367
Query: 115 MVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKRG-----EG 169
+ ++ K+ +LKK+ YGLKQS W+ +++K++ K + RG +
Sbjct: 1368 LGMND--KLIRLKKSHYGLKQSGANWY----ETIKSYLIKQCGMEEV----RGWSCVFKN 1417
Query: 170 KITALIIYVDDMIVTGN----NQDEISSLQK-YLTSKFEMKQLGN-LKY-FMGIEV--AR 220
+ ++VDDMI+ N+ I++L+K Y T + + N ++Y +G+E+ R
Sbjct: 1418 SQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQR 1477
Query: 221 SKHGIFLCQRKYTLDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKGRY-------Q 273
K+ + T + L K + L+ + D+ Y Q
Sbjct: 1478 GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQ 1537
Query: 274 SLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFSNNG 332
L+G Y+ + R D+ Y +N ++Q + P + +D+ +++++ T K +++ N
Sbjct: 1538 KLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNK 1597
Query: 333 HL----RVEGYTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEVEFRGM 388
++ +DA + G+ +S G + G ++ +S K + S+ E E +
Sbjct: 1598 PTEPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAI 1656
Query: 389 ALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIEIAHNPVQHD-RTKHVEIDRHFIKE 447
+ + L + ++ +L +P L D+ S I I + + R + +++
Sbjct: 1657 SESVPLLNNLSYLIQELNKKP-IIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRD 1715
Query: 448 KLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
++ + ++ +++ +AD++TK + K F
Sbjct: 1716 EVSGNNLYVYYIETKKNIADVMTKPLPIKTF 1746
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 98.2 bits (243), Expect = 4e-20
Identities = 111/525 (21%), Positives = 228/525 (43%), Gaps = 83/525 (15%)
Query: 3 EEMTTLKKNNTWDLVTLPRGKKTVGCRWV---FTIKHKADGTIDRYKARLVAKGYTQSYG 59
+E+ L K TWD K+ R + F K DGT +KAR VA+G
Sbjct: 1256 KEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARG-----D 1307
Query: 60 VDYQETFAPVAKLNTVR-----ILLSLAANQDWPLLQFDVKNAFLHGEISEDIYMDTPPG 114
+ + +T+ + NTV LSLA + ++ + Q D+ +A+L+ +I E++Y+ PP
Sbjct: 1308 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPH 1367
Query: 115 MVYSNGLKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKRG-----EG 169
+ ++ K+ +LKK+LYGLKQS W+ +++K++ + + RG +
Sbjct: 1368 LGMND--KLIRLKKSLYGLKQSGANWY----ETIKSYLIQQCGMEEV----RGWSCVFKN 1417
Query: 170 KITALIIYVDDMIVTGNNQDEISSLQKYLTSKFEMKQLGNLKYFMGIEVARSKHGIFLCQ 229
+ ++VDDM++ N + + + L +++ K + +G ++ I +
Sbjct: 1418 SQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIIN-----LGESDEEIQYDILGLE 1472
Query: 230 RKYTLDLLSETGLLASKSAETPIEQNHKLFHCLNSNITDKGR------------------ 271
KY + G+ S + + P LN + KGR
Sbjct: 1473 IKYQRGKYMKLGMENSLTEKIP---------KLNVPLNPKGRKLSAPGQPGLYIDQQELE 1523
Query: 272 ------------YQSLVGKLIYLSHT-RPDITYAVNVVSQFMHDPRKPHMDVVERILRYL 318
Q L+G Y+ + R D+ Y +N ++Q + P K +D+ +++++
Sbjct: 1524 LEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFI 1583
Query: 319 KSTPGKGILFSNNGHLRVEG----YTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQP 374
+T K +++ + ++ +DA + G+ +S G + G ++ +S K
Sbjct: 1584 WNTRDKQLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKAS 1642
Query: 375 VVARSSAEVEFRGMALGMCELLWVKSVLSDLGFEPKEAMSLYCDNTSAIE-IAHNPVQHD 433
+ S+ E E ++ + L + ++ +L +P L D+ S I I N +
Sbjct: 1643 LTCTSTTEAEIHAISESVPLLNNLSYLIQELDKKP-ITKGLLTDSKSTISIIISNNEEKF 1701
Query: 434 RTKHVEIDRHFIKEKLDAGTIVFPFVRSEQQLADMLTKGVSSKVF 478
R + +++++ + ++ +++ +AD++TK + K F
Sbjct: 1702 RNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1746
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 85.9 bits (211), Expect = 2e-16
Identities = 39/82 (47%), Positives = 56/82 (67%)
Query: 1 MVEEMTTLKKNNTWDLVTLPRGKKTVGCRWVFTIKHKADGTIDRYKARLVAKGYTQSYGV 60
M EE+ L +N TW LV P + +GC+WVF K +DGT+DR KARLVAKG+ Q G+
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYQETFAPVAKLNTVRILLSLA 82
+ ET++PV + T+R +L++A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 76.6 bits (187), Expect = 1e-13
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 280 IYLSHTRPDITYAVNVVSQFMHDPRKPHMDVVERILRYLKSTPGKGILFSNNGHLRVEGY 339
+YL+ TRPD+T+AVN +SQF R M V ++L Y+K T G+G+ +S L+++ +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 340 TDADWAGSADDRRSTSGYFTFV 361
D+DWA D RRS +G+ + V
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>POL_FMVD (P09523) Enzymatic polyprotein [Contains: Aspartic
protease (EC 3.4.23.-); Endonuclease; Reverse
transcriptase (EC 2.7.7.49)]
Length = 666
Score = 36.2 bits (82), Expect = 0.20
Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 32/216 (14%)
Query: 142 GRFTKSMKTFGYKASNSDHTLFLKRG-EGKITALIIYVDDMIVTGNNQDEISSLQKYLTS 200
G F + FG K + S ++ G ++YVDD+IV N+
Sbjct: 358 GHFQWKVVPFGLKQAPSIFQRHMQTALNGADKFCMVYVDDIIVFSNS------------- 404
Query: 201 KFEMKQLGNLKYFMGIEVARSKHGIFLCQRKYTL--DLLSETGLLASKSAETPIEQNHKL 258
+L + + + K+GI L ++K L + ++ GL K P QNH L
Sbjct: 405 -----ELDHYNHVYAVLKIVEKYGIILSKKKANLFKEKINFLGLEIDKGTHCP--QNHIL 457
Query: 259 --FHCLNSNITDKGRYQSLVGKLIYLSHTRPDIT-----YAVNVVSQFMHDPRKPHMDVV 311
H + DK Q +G L Y P + V + + + D V
Sbjct: 458 ENIHKFPDRLEDKKHLQRFLGVLTYAETYIPKLAEIRKPLQVKLKKDVTWNWTQSDSDYV 517
Query: 312 ERILRYLKSTPGKGILFSNNGHLRVE-GYTDADWAG 346
++I + L S P K L HL +E +D+ W G
Sbjct: 518 KKIKKNLGSFP-KLYLPKPEDHLIIETDASDSFWGG 552
>ENGC_STAAW (P67683) Probable GTPase engC (EC 3.6.1.-)
Length = 291
Score = 35.0 bits (79), Expect = 0.44
Identities = 18/53 (33%), Positives = 31/53 (57%), Gaps = 2/53 (3%)
Query: 273 QSLVGKLIYLSHTRPDITYAVNVVSQFMHDPRKP--HMDVVERILRYLKSTPG 323
QS VGK +L+H RP++ N +S+ ++ + H+++ ER Y+ TPG
Sbjct: 165 QSGVGKSTFLNHYRPELNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPG 217
>ENGC_STAAN (P67682) Probable GTPase engC (EC 3.6.1.-)
Length = 291
Score = 35.0 bits (79), Expect = 0.44
Identities = 18/53 (33%), Positives = 31/53 (57%), Gaps = 2/53 (3%)
Query: 273 QSLVGKLIYLSHTRPDITYAVNVVSQFMHDPRKP--HMDVVERILRYLKSTPG 323
QS VGK +L+H RP++ N +S+ ++ + H+++ ER Y+ TPG
Sbjct: 165 QSGVGKSTFLNHYRPELNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPG 217
>ENGC_STAAM (P67681) Probable GTPase engC (EC 3.6.1.-)
Length = 291
Score = 35.0 bits (79), Expect = 0.44
Identities = 18/53 (33%), Positives = 31/53 (57%), Gaps = 2/53 (3%)
Query: 273 QSLVGKLIYLSHTRPDITYAVNVVSQFMHDPRKP--HMDVVERILRYLKSTPG 323
QS VGK +L+H RP++ N +S+ ++ + H+++ ER Y+ TPG
Sbjct: 165 QSGVGKSTFLNHYRPELNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPG 217
>ENGC_STAAC (Q9KX08) Probable GTPase engC (EC 3.6.1.-)
Length = 291
Score = 35.0 bits (79), Expect = 0.44
Identities = 18/53 (33%), Positives = 31/53 (57%), Gaps = 2/53 (3%)
Query: 273 QSLVGKLIYLSHTRPDITYAVNVVSQFMHDPRKP--HMDVVERILRYLKSTPG 323
QS VGK +L+H RP++ N +S+ ++ + H+++ ER Y+ TPG
Sbjct: 165 QSGVGKSTFLNHYRPELNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPG 217
>VRK1_MOUSE (Q80X41) Serine/threonine-protein kinase VRK1 (EC
2.7.1.37) (Vaccinia-related kinase 1)
(Serine/threonine-protein kinase 51PK)
Length = 440
Score = 33.5 bits (75), Expect = 1.3
Identities = 36/164 (21%), Positives = 67/164 (39%), Gaps = 18/164 (10%)
Query: 194 LQKYLTSKFEMKQLGNLKYF-MGIEVARSKHGIFLCQRKYTLDLLSETGLLASK-SAETP 251
+QK++ + ++K LG KY+ G+ K F+ ++ DL A + S +T
Sbjct: 96 IQKWIRTH-KLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTV 154
Query: 252 IEQNHKLFHCLNSNITDKGRYQSLVGKLIYLSHTRPDITYAVN-----------VVSQFM 300
++ + ++ L + + + + LSH PD Y V+ V ++
Sbjct: 155 LQLSLRILDILEYIHEHEYVHGDIKASNLLLSHKNPDQVYLVDYGLAYRYCPDGVHKEYK 214
Query: 301 HDPRKPHMDVVERILRYLKSTPGKGILFSNNGHLRVEGYTDADW 344
DP++ H + L + KG+ S G L + GY W
Sbjct: 215 EDPKRCH----DGTLEFTSIDAHKGVAPSRRGDLEILGYCMIQW 254
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,188,007
Number of Sequences: 164201
Number of extensions: 2372757
Number of successful extensions: 5444
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 5394
Number of HSP's gapped (non-prelim): 31
length of query: 494
length of database: 59,974,054
effective HSP length: 114
effective length of query: 380
effective length of database: 41,255,140
effective search space: 15676953200
effective search space used: 15676953200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC149600.1