BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149582.7 - phase: 0
(155 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FNB3_MOUSE (Q9R1C7) Formin-binding protein 3 (Formin-binding pro... 36 0.039
FNB3_HUMAN (O75400) Formin-binding protein 3 (Huntingtin yeast p... 36 0.039
UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-f... 34 0.11
SNC1_HUMAN (Q16533) snRNA activating protein complex 43 kDa subu... 34 0.11
CRK7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase... 34 0.11
H5_CAIMO (P06513) Histone H5 34 0.15
SVP1_CAVPO (P05995) Seminal vesicle major clotting proteins prec... 33 0.19
H5_ANSAN (P02258) Histone H5 33 0.19
YHC1_YEAST (P23180) Hypothetical 53.1 kDa protein in SPO11-OPI1 ... 33 0.33
YAD1_YEAST (P39732) Hypothetical 86.6 kDa protein in PYK1-SNC1 i... 33 0.33
MYS3_YEAST (P36006) Myosin-3 isoform 32 0.43
GAR2_SCHPO (P41891) Protein gar2 32 0.43
CTK2_XENLA (P79955) Carboxy-terminal kinesin 2 (XCTK2) 32 0.43
SFRB_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arg... 32 0.56
H5_CHICK (P02259) Histone H5 32 0.56
CHD7_HUMAN (Q9P2D1) Chromodomain-helicase-DNA-binding protein 7 ... 32 0.56
ICAL_MOUSE (P51125) Calpain inhibitor (Calpastatin) 32 0.73
HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li... 32 0.73
ZPW1_HUMAN (Q9H0M4) Zinc finger CW-type PWWP domain protein 1 31 0.96
SBDS_MOUSE (P70122) Shwachman-Bodian-Diamond syndrome protein ho... 31 0.96
>FNB3_MOUSE (Q9R1C7) Formin-binding protein 3 (Formin-binding
protein 11) (FBP 11)
Length = 953
Score = 35.8 bits (81), Expect = 0.039
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 51 RRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKA-KRIHQSSTKNNDSVTSHENKKILLQ 109
+++ RS S SA E SS S KSKK K+K+ KR H+S + +D+ + K+
Sbjct: 839 KKRQRSESHSASERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDTEREKDKKEKDRD 898
Query: 110 SEK 112
SEK
Sbjct: 899 SEK 901
>FNB3_HUMAN (O75400) Formin-binding protein 3 (Huntingtin yeast
partner A) (Huntingtin-interacting protein HYPA/FBP11)
(Fas-ligand associated factor 1) (NY-REN-6 antigen)
(HSPC225)
Length = 957
Score = 35.8 bits (81), Expect = 0.039
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 51 RRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKA-KRIHQSSTKNNDSVTSHENKKILLQ 109
+++ RS S SA E SS S KSKK K+K+ KR H+S + +D+ + K+ +
Sbjct: 843 KKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRE 902
Query: 110 SEK 112
SEK
Sbjct: 903 SEK 905
>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3
(Up-frameshift suppressor 3)
Length = 387
Score = 34.3 bits (77), Expect = 0.11
Identities = 25/90 (27%), Positives = 46/90 (50%), Gaps = 2/90 (2%)
Query: 37 VTTARKVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQSSTKNND 96
V T KV K+ + K+ F E S+ K+ + + KKK+ ++ S TKN++
Sbjct: 264 VGTGDKVKNKNKKKKNKNAKKKFKEEEASA-KIPKKKRNRGKKKRENREKSTISKTKNSN 322
Query: 97 SVTSHE-NKKILLQSEKALVVEENQEFAPS 125
V E K++L Q +K ++++E + + S
Sbjct: 323 VVIIEEAGKEVLKQRKKKMLLQEKLKISNS 352
>SNC1_HUMAN (Q16533) snRNA activating protein complex 43 kDa subunit
(SNAPc 43 kDa subunit) (Proximal sequence
element-binding transcription factor gamma subunit)
(PSE-binding factor gamma subunit) (PTF gamma subunit)
Length = 368
Score = 34.3 bits (77), Expect = 0.11
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 45 IIPKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRI----HQSSTKNNDSVTS 100
+I R+HR + + + S S GQVK+ +KK K +R+ + S +N +V +
Sbjct: 273 VIQASKSRRHRQVKLDSSDSDS--ASGQGQVKATRKKEKKERLKPAGRKMSLRNKGNVQN 330
Query: 101 -HENKKILLQSEKALVVEENQE 121
H+ K L S + EE E
Sbjct: 331 IHKEDKPLSLSMPVITEEEENE 352
>CRK7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7
(EC 2.7.1.37) (CDC2-related protein kinase 7) (CrkRS)
Length = 1490
Score = 34.3 bits (77), Expect = 0.11
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 19 PVASVSSYQNPTLSPNASVTTARKVSIIPKEARRK---HRSISFSAREPS--------SP 67
P S+YQ+ T SP S + R+ S+ P RR RS S+S R PS SP
Sbjct: 278 PYKEPSAYQSSTRSP--SPYSRRQRSVSPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSP 335
Query: 68 KVSCMGQVKSKKKKRKAKRIHQSSTKNNDSVTSHENKK 105
+S +S RK+ + S + +SH KK
Sbjct: 336 FLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKK 373
>H5_CAIMO (P06513) Histone H5
Length = 193
Score = 33.9 bits (76), Expect = 0.15
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 17 KRPVASVSSYQNPTLSPNASVTTARKVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVK 76
K+ A S+ P + + A+K ++AR+K R+ A++P + K + K
Sbjct: 112 KKKAARRSTSPRKAARPRKARSPAKKPKAAARKARKKSRASPKKAKKPKTVKAKSLKTSK 171
Query: 77 SKKKKRKAKRIHQSSTKN 94
KK KR R + K+
Sbjct: 172 VKKAKRSKPRAKSGARKS 189
>SVP1_CAVPO (P05995) Seminal vesicle major clotting proteins
precursor [Contains: Seminal vesicle protein 1 (SVP-1);
Seminal vesicle protein 3/4 (SVP-3/4)]
Length = 396
Score = 33.5 bits (75), Expect = 0.19
Identities = 20/72 (27%), Positives = 36/72 (49%), Gaps = 6/72 (8%)
Query: 34 NASVTTARKVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQSSTK 93
N +VS+ + + H I SA EP +VS V+ ++ ++ KR H S +
Sbjct: 111 NVEEPEGERVSVRREHLEKSH--IRHSAEEPEGERVS----VRHERVEKTHKRFHDDSVE 164
Query: 94 NNDSVTSHENKK 105
+DS +S +++K
Sbjct: 165 ESDSASSVDHRK 176
>H5_ANSAN (P02258) Histone H5
Length = 193
Score = 33.5 bits (75), Expect = 0.19
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 17 KRPVASVSSYQNPTLSPNASVTTARKVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVK 76
K+ A S+ P + + A+K ++AR+K R+ A++P + K + K
Sbjct: 112 KKKAARKSTSPKKAARPRKARSPAKKPKAAARKARKKSRASPKKAKKPKTVKAKSLKTSK 171
Query: 77 SKKKKRKAKRIHQSSTKN 94
KK +R R + K+
Sbjct: 172 PKKARRSKPRAKSGARKS 189
Score = 28.9 bits (63), Expect = 4.8
Identities = 18/81 (22%), Positives = 35/81 (42%)
Query: 6 KMKNKFFKFLPKRPVASVSSYQNPTLSPNASVTTARKVSIIPKEARRKHRSISFSAREPS 65
K K K + A ++P P A+ ARK S + +K +++ + + S
Sbjct: 111 KKKKAARKSTSPKKAARPRKARSPAKKPKAAARKARKKSRASPKKAKKPKTVKAKSLKTS 170
Query: 66 SPKVSCMGQVKSKKKKRKAKR 86
PK + + ++K RK+ +
Sbjct: 171 KPKKARRSKPRAKSGARKSPK 191
>YHC1_YEAST (P23180) Hypothetical 53.1 kDa protein in SPO11-OPI1
intergenic region
Length = 465
Score = 32.7 bits (73), Expect = 0.33
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 30 TLSPNASVTTARKVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQ 89
T + A+ A + II R +I+FS E S P C V + AK +
Sbjct: 22 TYTSAATAAAANRGHIIKTYFNRDSTTITFSMEESSKPVSVCFNNVFLRDASHSAKLVTT 81
Query: 90 SSTKNNDSVTSHENKKILLQSEKALVVE 117
+N+ +T+ ++ +I + K+LVV+
Sbjct: 82 GELYHNEKLTAPQDIQI-SEDGKSLVVK 108
>YAD1_YEAST (P39732) Hypothetical 86.6 kDa protein in PYK1-SNC1
intergenic region
Length = 760
Score = 32.7 bits (73), Expect = 0.33
Identities = 23/105 (21%), Positives = 48/105 (44%), Gaps = 5/105 (4%)
Query: 6 KMKNKFFKFLPKRPVASVSSYQNPTLSPNASVTTARKVSIIPKEARRKHRSISFSAREPS 65
++KN K K + + + +P+ SP +S + +R+ S+ R + S S+R PS
Sbjct: 440 EVKNAKSKLKKKPSITKLPASSSPSPSPTSSASPSRQASLESIRTRARAHLASNSSRSPS 499
Query: 66 SPKVSCMGQVKSKKKKR-----KAKRIHQSSTKNNDSVTSHENKK 105
V K+ + K+ + +++ + S+ S+ NK+
Sbjct: 500 VSPVRTTFNNKNAETKKSVVSPEKRKLINGRRPRSSSLQSYTNKQ 544
>MYS3_YEAST (P36006) Myosin-3 isoform
Length = 1273
Score = 32.3 bits (72), Expect = 0.43
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 2 EKLSKMKNKFFKFLPKRPVASVSSYQNP----TLSPNASVTTARKVSIIPKEA----RRK 53
E ++++K K + KR V ++ ++ P T+ S +A K I K + RR
Sbjct: 901 ELMTRLKKLNEKIMIKRLVPTIEYHKQPNKLHTVRSKIS-DSAPKYGDIYKSSTIYVRRG 959
Query: 54 HRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQSSTKNNDSVTSHEN--KKILLQSE 111
H + S S ++P +P +KSKK K H+S+ K+ S SH + KK L S+
Sbjct: 960 HPANSKSNKKPKNPGGLSGKPIKSKKSK------HKSTHKHTHSHRSHRDAAKKQPLPSQ 1013
Query: 112 K 112
K
Sbjct: 1014 K 1014
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 32.3 bits (72), Expect = 0.43
Identities = 23/106 (21%), Positives = 44/106 (40%), Gaps = 4/106 (3%)
Query: 42 KVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQSSTKNNDSVTSH 101
K + PK+++++ + S P K S Q KSKKK+ + S+ + +S
Sbjct: 46 KTDVSPKKSKKEAKRAS----SPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSS 101
Query: 102 ENKKILLQSEKALVVEENQEFAPSMLIVPSLGTMKKFESGRGSLSD 147
E++ +SE + + E +++ ES S S+
Sbjct: 102 ESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESE 147
>CTK2_XENLA (P79955) Carboxy-terminal kinesin 2 (XCTK2)
Length = 643
Score = 32.3 bits (72), Expect = 0.43
Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 6 KMKNKFFKFLPKRPVASVSSYQNPTLSPNASVTTARKVS------IIPKEARRKHRSISF 59
++++ LP VA+ + P +P A++ + + + PK + S SF
Sbjct: 36 RLRSSLESELPAVRVAASIATSKPRAAPVAALPKPQVIGRQSLAVMRPKNSGPGITSTSF 95
Query: 60 SAREPSSPKVSCMGQVKSKKKKRKAKRIHQSSTKNNDSVTSHENKKILLQSEKALVVEEN 119
S + S V+ + ++KKKR A + D+V++++ K L E A ++
Sbjct: 96 SGKTKVSSSVTQPAAIGAEKKKRAAWDLKGQVNDMRDTVSNYKGKMQNLTGENARLLNSK 155
Query: 120 QEFAPSMLIVPS 131
++ + ++ S
Sbjct: 156 EKLQREVEVLAS 167
>SFRB_HUMAN (Q05519) Splicing factor arginine/serine-rich 11
(Arginine-rich 54 kDa nuclear protein) (p54)
Length = 484
Score = 32.0 bits (71), Expect = 0.56
Identities = 22/82 (26%), Positives = 37/82 (44%), Gaps = 1/82 (1%)
Query: 32 SPNASVTTARKVSIIPKEARRKH-RSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQS 90
+P S +TAR+ +E RR+ RS + S ++P SPK ++ K++ K+
Sbjct: 325 TPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDK 384
Query: 91 STKNNDSVTSHENKKILLQSEK 112
++ S KK EK
Sbjct: 385 ERSRDERERSTSKKKKSKDKEK 406
>H5_CHICK (P02259) Histone H5
Length = 189
Score = 32.0 bits (71), Expect = 0.56
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 17 KRPVASVSSYQNPTLSPNASVTTARKVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVK 76
K+ S+ P + + A+K ++AR+K R+ A++P + K K
Sbjct: 108 KKKAVRRSTSPKKAARPRKARSPAKKPKATARKARKKSRASPKKAKKPKTVKAKSRKASK 167
Query: 77 SKKKKRKAKRIHQSSTKN 94
+KK KR R + K+
Sbjct: 168 AKKVKRSKPRAKSGARKS 185
>CHD7_HUMAN (Q9P2D1) Chromodomain-helicase-DNA-binding protein 7
(CHD-7) (Fragment)
Length = 1967
Score = 32.0 bits (71), Expect = 0.56
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 5 SKMKNKFFKFLPKRPVASVSSYQNPTLSPNASVTTARKVSIIPKEARRKHRSISFSAREP 64
S ++ + F L AS+S ++ T SP S A +S +P++ RR+ R I A E
Sbjct: 1594 SPLQKRSFAELSMVGQASISGSEDITTSPQLSKEDALNLS-VPRQRRRRRRKIEIEA-ER 1651
Query: 65 SSPKVSCMGQVKSKKKKR--------------KAKRIHQSSTKNNDSVTS 100
++ + + M V ++ + KA R SST N S++S
Sbjct: 1652 AAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLSS 1701
>ICAL_MOUSE (P51125) Calpain inhibitor (Calpastatin)
Length = 788
Score = 31.6 bits (70), Expect = 0.73
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 32 SPNASVTTARKVSII-----PKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKR 86
SP+ S T + + + P + R + +++ +++P S + + + KSK ++
Sbjct: 81 SPSMSTTETKAIPVNKQLEGPDQKRPREQAVKTESKKPQSSEQPVVHEKKSKGGPKEGSE 140
Query: 87 IHQSSTKNNDSVTSHENK-KILLQSEKALVVEENQEFAPSMLIVPSLG 133
+ + + H +K K L +S + +V E+ E VPS G
Sbjct: 141 PKNLPKHTSSTGSKHAHKEKALSRSNEQMVSEKPSESKTKFQDVPSAG 188
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like
protein)
Length = 3969
Score = 31.6 bits (70), Expect = 0.73
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 1 MEKLSKMKNKFFKFLPKRPVASVSSYQN------PTLSPNASVTTARKVSIIPKEARRKH 54
+ K S +K + K L + +S S N P L+P TT+R++++ + +
Sbjct: 2297 VSKSSSLKGEKTKVLSSK--SSEGSAHNVAYPGIPKLAPQVHNTTSRELNVSKIGSFAEP 2354
Query: 55 RSISFSAREP-SSPKVSCMGQVKSKKKKRKAKRIHQSSTKNNDSVTSHENKKILLQSEKA 113
S+SFS++E S P + GQ + + + QS+ + D T + K+ S ++
Sbjct: 2355 SSVSFSSKEALSFPHLHLRGQRNDRDQHTDST---QSANSSPDEDTEVKTLKLSGMSNRS 2411
Query: 114 LVVEEN 119
++ E+
Sbjct: 2412 SIINEH 2417
>ZPW1_HUMAN (Q9H0M4) Zinc finger CW-type PWWP domain protein 1
Length = 494
Score = 31.2 bits (69), Expect = 0.96
Identities = 35/142 (24%), Positives = 59/142 (40%), Gaps = 8/142 (5%)
Query: 16 PKRPVA--SVSSYQNPTLSPNASVTTARKVSIIPKEARRKHRSISFSAREPSSPKVSCMG 73
PKR A + SY SPN+ +S EAR S +E + +
Sbjct: 15 PKRIFAPPAQKSYSLLPCSPNSPKEETPGISSPETEARISLPKASLKKKEEKATMKNVPS 74
Query: 74 QVKSKKKKRKAKRIHQSSTKNNDSVTSHENK---KILLQS--EKALVVEENQEFAPSMLI 128
+ + KK+K + + + K S+T+ E + +I+LQ ++ L + +FA +
Sbjct: 75 REQEKKRKAQINKQAEKKEKEKSSLTNAEFEEIVQIVLQKSLQECLGMGSGLDFAETSCA 134
Query: 129 VPSLGTMKKFESG-RGSLSDFD 149
P + T E G S +D D
Sbjct: 135 QPVVSTQSDKEPGITASATDTD 156
>SBDS_MOUSE (P70122) Shwachman-Bodian-Diamond syndrome protein
homolog (Protein 22A3)
Length = 250
Score = 31.2 bits (69), Expect = 0.96
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 39 TARKVSIIPKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQSSTKNNDSV 98
T R ++I E R + I +S + S K + +K K+K K +R H + +
Sbjct: 124 TKRPYTVILIE--RAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHM---RLRFIL 178
Query: 99 TSHENKKILLQSEKALVVEENQEFAPSMLIVPSLG---------TMKKFESGRGSL 145
+E KK+ + + + V E+++++ + IV + +KK GRGSL
Sbjct: 179 PVNEGKKLKEKLKPLMKVVESEDYSQQLEIVCLIDPGCFREIDELIKKETKGRGSL 234
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.310 0.123 0.323
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,200,558
Number of Sequences: 164201
Number of extensions: 579162
Number of successful extensions: 2255
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 2184
Number of HSP's gapped (non-prelim): 126
length of query: 155
length of database: 59,974,054
effective HSP length: 101
effective length of query: 54
effective length of database: 43,389,753
effective search space: 2343046662
effective search space used: 2343046662
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC149582.7