BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149582.6 + phase: 0 
         (377 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome tetratr...    34  0.70
RPOB_WOLPI (Q93MK7) DNA-directed RNA polymerase beta chain (EC 2...    32  3.5
PCK1_SCHPO (P36582) Protein kinase C-like 1 (EC 2.7.1.-)               32  3.5
VE2_HPV28 (P50771) Regulatory protein E2                               31  4.5
ICE_DROME (O01382) Caspase precursor (EC 3.4.22.-) (drICE)             31  4.5
C773_SOYBN (O48928) Cytochrome P450 77A3 (EC 1.14.-.-)                 31  4.5
GIS4_YEAST (Q04233) Protein GIS4                                       31  5.9

>UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome
            tetratricopeptide repeat protein (Ubiquitously
            transcribed TPR protein on the Y chromosome)
          Length = 1347

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 31/152 (20%), Positives = 73/152 (47%), Gaps = 21/152 (13%)

Query: 6    DWSHLPKELWSKIGKYLD-NHIDILR---FRSVCESFRSSIPPSHPNSPSFPLQIPHTIF 61
            +W  +P++ W  +  + + N+++ L    + ++ + + +++P          +Q P    
Sbjct: 1112 EWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRF------IQRP---- 1161

Query: 62   DSLYYLHQSTIYLIEPTNGSSN--FNLPPLAPSYTKGWLIKVEESNNNPLKSLLSPISDC 119
              L +++  T++ ++     +N  +N+ PL     K   + VE    N LKS+ SP+   
Sbjct: 1162 GDLVWINAGTVHWVQTVGWCNNIAWNVGPLTACQYK---LAVERYEWNKLKSVKSPVPMV 1218

Query: 120  KLSYPLDSN--NSSPIIWNLLNYRVIELCKSY 149
             LS+ +  N   S P ++ ++ Y ++++ K Y
Sbjct: 1219 HLSWNMARNIKVSDPKLFEMIKYCLLKILKQY 1250


>RPOB_WOLPI (Q93MK7) DNA-directed RNA polymerase beta chain (EC
           2.7.7.6) (RNAP beta subunit) (Transcriptase beta chain)
           (RNA polymerase beta subunit)
          Length = 1436

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 190 GFMKYGDTKWKLVDENNFFYDDVIV--FKGLFYVTDRWGTISWIDISSLRLIQFAPPLCG 247
           G     DT  KL DENN F DD++   + G F + +    +S+ID+S  ++I  A  L  
Sbjct: 637 GLYYIADTSAKL-DENNCFVDDMLYCRYAGTFVMVNS-NQVSYIDLSPKQVISVAASLIP 694

Query: 248 F 248
           F
Sbjct: 695 F 695


>PCK1_SCHPO (P36582) Protein kinase C-like 1 (EC 2.7.1.-)
          Length = 988

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 53  PLQIPHTIFDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEESNNNPLK-S 111
           PL   +T FD+L  + Q  +   +P   +S  N  PL  +  K   + V  S++ P   S
Sbjct: 571 PLSSQNT-FDTLPTISQGLLAATQPV--TSVLNTSPLPKTPEKDRSLNVTPSSSTPTPAS 627

Query: 112 LLSPISDCKLSYPLDSNNSSP 132
           +L+P S   LS   D+N S P
Sbjct: 628 VLAPPSSASLSSSKDANRSVP 648


>VE2_HPV28 (P50771) Regulatory protein E2
          Length = 376

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 15/63 (23%), Positives = 28/63 (43%)

Query: 7   WSHLPKELWSKIGKYLDNHIDILRFRSVCESFRSSIPPSHPNSPSFPLQIPHTIFDSLYY 66
           W  +PK+ W K G  ++   D    +S+C      I   + +   +     H  ++ LYY
Sbjct: 102 WDTVPKKCWKKRGVTVEVRYDGDETKSMCYVHWRDIFTQNYSDDKWVKVAGHVSYEGLYY 161

Query: 67  LHQ 69
           +H+
Sbjct: 162 IHE 164


>ICE_DROME (O01382) Caspase precursor (EC 3.4.22.-) (drICE)
          Length = 339

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 147 KSYTFQKTLYSPSY---VSKVVFYPNSPRINVGDCVACCIFQEGKLGFMKYGDTKWKLVD 203
           K   F+ T+Y       + + + Y  S   +  DC+   I   G++G++   DT++KL +
Sbjct: 127 KQLDFEVTVYKDCRYKDILRTIEYAASQNHSDSDCILVAILSHGEMGYIYAKDTQYKLDN 186

Query: 204 ENNFF 208
             +FF
Sbjct: 187 IWSFF 191


>C773_SOYBN (O48928) Cytochrome P450 77A3 (EC 1.14.-.-)
          Length = 513

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 20/67 (29%), Positives = 31/67 (45%), Gaps = 5/67 (7%)

Query: 58  HTIFDSLYYLHQSTIYLIEPTNGSSNFNLPPLAPSY-TKGWLIKVEESNNNPLKSLLSPI 116
           H IF +L +     I+ ++  + S  FNLPP  P +   G L +V  S     K     +
Sbjct: 9   HFIFTALAFFISGLIFFLKQKSKSKKFNLPPGPPGWPIVGNLFQVARSG----KPFFEYV 64

Query: 117 SDCKLSY 123
           +D +L Y
Sbjct: 65  NDVRLKY 71


>GIS4_YEAST (Q04233) Protein GIS4
          Length = 774

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 31/112 (27%), Positives = 46/112 (40%), Gaps = 6/112 (5%)

Query: 66  YLHQSTIYLIEPTNGSSNFNLPPLAPSYTKGWLIKVEES--NNNPLKSLLSP-ISDCKLS 122
           Y H++   L   T+  +NF  P      +  W ++      NNN   S+  P IS  K S
Sbjct: 109 YNHENHYLL---TDNLNNFQDPTFLEFASTSWQVQKNSKALNNNNRNSIPPPTISSSKAS 165

Query: 123 YPLDSNNSSPIIWNLLNYRVIELCKSYTFQKTLYSPSYVSKVVFYPNSPRIN 174
                +N S   W+ +N +     ++ T  +TL SP  V   V   NS   N
Sbjct: 166 NGKLESNVSDDQWSNINTQTSTATRTNTNTRTLTSPDTVDINVTSVNSQSNN 217


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.140    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,807,065
Number of Sequences: 164201
Number of extensions: 2238712
Number of successful extensions: 4395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4394
Number of HSP's gapped (non-prelim): 7
length of query: 377
length of database: 59,974,054
effective HSP length: 112
effective length of query: 265
effective length of database: 41,583,542
effective search space: 11019638630
effective search space used: 11019638630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)