Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149576.6 - phase: 0 
         (597 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CLCF_ARATH (Q8RXR2) Chloride channel protein CLC-f (AtCLC-f)           35  0.43
Y531_METTH (O26631) Hypothetical protein MTH531                        33  2.1
YH64_PYRFU (Q8U053) Hypothetical UPF0173 metal-dependent hydrola...    33  2.8
CRB_DROME (P10040) Crumbs protein precursor (95F)                      33  2.8
ALS3_CANAL (O74623) Agglutinin-like protein 3 precursor                32  3.6
YKV5_YEAST (P28273) Hypothetical 140.4 kDa protein in URA1-DOA1 ...    32  6.2
RLA0_LEICH (P39096) 60S acidic ribosomal protein P0                    32  6.2
IBP2_RAT (P12843) Insulin-like growth factor binding protein 2 p...    32  6.2
WRK4_ARATH (Q9XI90) Probable WRKY transcription factor 4 (WRKY D...    31  8.1

>CLCF_ARATH (Q8RXR2) Chloride channel protein CLC-f (AtCLC-f)
          Length = 781

 Score = 35.4 bits (80), Expect = 0.43
 Identities = 28/101 (27%), Positives = 42/101 (40%), Gaps = 20/101 (19%)

Query: 412 WGGTANRGRLKLRVGQPPENW--------TSGVDLGRLLDLLE-LDLVTTNETLQDSGQE 462
           W GT N G   LR+ +  + W        T GV +G +  LLE LD +  + + Q  G +
Sbjct: 161 WAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILDQIRQSNSSQRQGLD 220

Query: 463 QMNG-----------STAGIGSTVGESSPTVPIKEKLEESF 492
            + G            T G G ++G   P+V I +     F
Sbjct: 221 FLAGIYPVIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGF 261


>Y531_METTH (O26631) Hypothetical protein MTH531
          Length = 312

 Score = 33.1 bits (74), Expect = 2.1
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 21/163 (12%)

Query: 220 LGAIVRSRTGNREVGFLTNRHVAVDLDYPNQKMFHPLPPSLGPGVYLGAVERATSFITDD 279
           +GA    R   R +  L NR +  D+     +  H LP        L A +R      + 
Sbjct: 10  IGAGNAGRPAARLLNHLNNRVLVNDV-----RELHELP--------LKAQKRIAEMEDEG 56

Query: 280 LWYGIFAGTNPETFVRADGAFIP--FAEDFNMNNVITSIRGVGDIGEVHRIDLQSPINSL 337
           + +  F G + E  + AD  FI     +D  +  ++   R  GD+  +   D+   +N L
Sbjct: 57  VMFR-FGGHSMEDILWADAVFISPNIPQDAPVRKMV---REAGDLVHITTSDIGRTLNEL 112

Query: 338 IGRQVIKVGRSSGLTTGTIMAYALEYNDEKGICF--LTDFLVV 378
           IG  ++ V  + G TT T M   +  +  + + F  L D LV+
Sbjct: 113 IGLPMVGVAGTDGKTTTTNMIDHILSSRYRTVSFSSLQDSLVI 155


>YH64_PYRFU (Q8U053) Hypothetical UPF0173 metal-dependent hydrolase
           PF1764
          Length = 225

 Score = 32.7 bits (73), Expect = 2.8
 Identities = 20/61 (32%), Positives = 33/61 (53%), Gaps = 3/61 (4%)

Query: 68  AAEDRANYFGNLQKGVLPETLGRLPSGQQATTLLELMTIRAFHSKILRRFSLGTAIGFRI 127
           A  D ANY     KGV  ET+G +  G      +E++ + A+HS    ++S+G A G+ +
Sbjct: 71  AMYDLANYIAEKYKGV--ETIG-MNYGPTKVDEVEIVQVPAWHSSSDGKYSIGNACGYIV 127

Query: 128 R 128
           +
Sbjct: 128 K 128


>CRB_DROME (P10040) Crumbs protein precursor (95F)
          Length = 2139

 Score = 32.7 bits (73), Expect = 2.8
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 161 LEGPGGVWCDVDVVEFSYYG----APAPTPKEQLYTELADGLRGSDSCVGSGSQVASQET 216
           L+GPG  + +   V+   +G     P P     L+T L D    +D C+G G+  +S E 
Sbjct: 229 LDGPGLQFVNNSTVQNVVFGHCPLTPGPCSDHDLFTRLPDNFCLNDPCMGHGTCSSSPEG 288

Query: 217 Y 217
           Y
Sbjct: 289 Y 289


>ALS3_CANAL (O74623) Agglutinin-like protein 3 precursor
          Length = 1119

 Score = 32.3 bits (72), Expect = 3.6
 Identities = 34/124 (27%), Positives = 51/124 (40%), Gaps = 9/124 (7%)

Query: 447  LDLVTTNETLQDSG----QEQMNGSTAGIGSTVGESSPTVPIKEKLEESFEPFCLNMEHV 502
            +D  TT  T Q       +  ++  T     T  +++P+VP  E   E       N E+ 
Sbjct: 897  VDSTTTESTSQSPSGIFSESGVSVETESSTVTTAQTNPSVPTTES--EVVFTTKGNNENG 954

Query: 503  PVEEPSTIVKPSL-RPCEFHIRNEIETVPNVEHQFIRT--SFAGKSPVHQSFLKEDMQFK 559
            P E PST VK S+    EF       T  ++E++ I T  S    SP+  S   E     
Sbjct: 955  PYESPSTNVKSSMDENSEFTTSTAASTSTDIENETIATTGSVEASSPIISSSADETTTVT 1014

Query: 560  SLSE 563
            + +E
Sbjct: 1015 TTAE 1018


>YKV5_YEAST (P28273) Hypothetical 140.4 kDa protein in URA1-DOA1
           intergenic region
          Length = 1286

 Score = 31.6 bits (70), Expect = 6.2
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 510 IVKPSLRPCEFHIRNEIETVPNVEHQFIRTSFAG-KSPVHQSFLKEDMQFKSLSELRNEP 568
           +++ +  PC F I  E ET+  V+ +F+  S    K+ + QSF +ED+  +    LR E 
Sbjct: 532 VIEENQEPCSF-ILGEPETILKVKKRFLELSKNSIKNLLSQSFSREDIVLERYLNLRYEG 590

Query: 569 DEDNFVSL 576
            E + + L
Sbjct: 591 TETSLMIL 598


>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0
          Length = 322

 Score = 31.6 bits (70), Expect = 6.2
 Identities = 25/90 (27%), Positives = 42/90 (45%), Gaps = 10/90 (11%)

Query: 414 GTANRGRLKLRVGQPPENWTSGVDLGRLLDLLELDLVTTNETLQDSGQE----QMNGSTA 469
           G +N   + L  G P  +    + +    +LL + + T+ E  + +G+E     +NG  A
Sbjct: 224 GLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFEEHNGKELREAAINGLLA 283

Query: 470 GIGSTVGE------SSPTVPIKEKLEESFE 493
           G GS   E      ++P+   KE+ EES E
Sbjct: 284 GSGSAAAEPAAAAPAAPSAAAKEEPEESDE 313


>IBP2_RAT (P12843) Insulin-like growth factor binding protein 2
           precursor (IGFBP-2) (IBP-2) (IGF-binding protein 2)
           (BRL-BP)
          Length = 304

 Score = 31.6 bits (70), Expect = 6.2
 Identities = 28/109 (25%), Positives = 41/109 (36%), Gaps = 9/109 (8%)

Query: 422 KLRVGQPPENWTSGVDLGRLLDLLELDLVTTNETLQDSGQEQMNGSTAGIGSTVGESSPT 481
           K RVG  P+      D     D  E  LV   E   D     + GS+AG           
Sbjct: 117 KRRVGATPQQVADSED-----DHSEGGLV---ENHVDGTMNMLGGSSAGRKPPKSGMKEL 168

Query: 482 VPIKEKLEESFEPFCLNMEHVPVEEPSTIVKPSLR-PCEFHIRNEIETV 529
              +EK+ E         +H+ +EEP  +  P  R PC+  +   +E +
Sbjct: 169 AVFREKVNEQHRQMGKGAKHLSLEEPKKLRPPPARTPCQQELDQVLERI 217


>WRK4_ARATH (Q9XI90) Probable WRKY transcription factor 4 (WRKY
           DNA-binding protein 4)
          Length = 514

 Score = 31.2 bits (69), Expect = 8.1
 Identities = 17/76 (22%), Positives = 31/76 (40%)

Query: 191 YTELADGLRGSDSCVGSGSQVASQETYGTLGAIVRSRTGNREVGFLTNRHVAVDLDYPNQ 250
           +++L  G   S +   + +  A+   Y  LG    S +G+ +  F  NR   + +     
Sbjct: 61  FSQLLAGAMSSPATAAAAAAAATASDYQRLGEGTNSSSGDVDPRFKQNRPTGLMISQSQS 120

Query: 251 KMFHPLPPSLGPGVYL 266
                +PP L P + L
Sbjct: 121 PSMFTVPPGLSPAMLL 136


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.317    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,860,531
Number of Sequences: 164201
Number of extensions: 3480987
Number of successful extensions: 7200
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7199
Number of HSP's gapped (non-prelim): 9
length of query: 597
length of database: 59,974,054
effective HSP length: 116
effective length of query: 481
effective length of database: 40,926,738
effective search space: 19685760978
effective search space used: 19685760978
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)


Medicago: description of AC149576.6