BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149576.1 - phase: 1
(110 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CYC6_ARATH (Q93VA3) Cytochrome c6, chloroplast precursor (Solubl... 195 2e-50
CYC6_MICAE (P00112) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 65 3e-11
CYC6_SYNP7 (P25935) Cytochrome c6 precursor (Soluble cytochrome ... 64 5e-11
CYC6_PORYE (Q8WKJ8) Cytochrome c6 precursor (Soluble cytochrome ... 64 5e-11
CYC6_SYNLI (P00114) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 64 8e-11
CYC6_BUMFI (P00110) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 64 8e-11
CYC6_PORTE (P00111) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 63 1e-10
CYC6_SYNVU (Q9F1L9) Cytochrome c6 precursor (Soluble cytochrome ... 62 2e-10
CYC6_SYNEL (P56534) Cytochrome c6 precursor (Soluble cytochrome ... 62 2e-10
CYC6_SYNY3 (P46445) Cytochrome c6 precursor (Soluble cytochrome ... 62 3e-10
CYC6_PORPU (P51200) Cytochrome c6 precursor (Soluble cytochrome ... 62 3e-10
CYC6_CYACA (Q9TLW1) Cytochrome c6 precursor (Soluble cytochrome ... 62 3e-10
CYC6_PETFA (P00108) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 61 4e-10
CYC6_ALAES (P00109) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 61 4e-10
CYC6_ANAVA (P00113) Cytochrome c6 precursor (Soluble cytochrome ... 60 1e-09
CYC6_APHFL (P00116) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 58 3e-09
CYC6_SYNP6 (P07497) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 57 1e-08
CYC6_PLEBO (P00117) Cytochrome c6 (Soluble cytochrome f) (Cytoch... 57 1e-08
CY6L_ANASP (Q8Z0D7) Cytochrome c6-like precursor 57 1e-08
CYC6_ANASP (P28596) Cytochrome c6 precursor (Soluble cytochrome ... 54 6e-08
>CYC6_ARATH (Q93VA3) Cytochrome c6, chloroplast precursor (Soluble
cytochrome f) (Cytochrome c553) (Cytochrome c-553)
(Cytochrome c-552) (Atc6)
Length = 175
Score = 195 bits (495), Expect = 2e-50
Identities = 85/108 (78%), Positives = 101/108 (92%)
Query: 1 SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 60
S+ QT+DIQRGATLF++ CIGCHD GGNIIQPG+TLFTKDL+RNGVDTEEEIYRVTY+GK
Sbjct: 68 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGK 127
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETE 108
GRMPGFG++C PRGQCTFG RL+DE+IK+LAEFVK QAD+GWP++ T+
Sbjct: 128 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVSTD 175
>CYC6_MICAE (P00112) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 81
Score = 65.1 bits (157), Expect = 3e-11
Identities = 35/92 (38%), Positives = 46/92 (49%), Gaps = 12/92 (13%)
Query: 11 GATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGFGKEC 70
GA++FS C CH G N++ TL +DL + G D+ E I G G MP
Sbjct: 2 GASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP------ 55
Query: 71 MPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
FG RL EDI+ +A +V QA+KGW
Sbjct: 56 ------AFGGRLSAEDIEAVANYVLAQAEKGW 81
>CYC6_SYNP7 (P25935) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 111
Score = 64.3 bits (155), Expect = 5e-11
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
AQ D+ G +FS C CH G N++ P TL DL + G+ + E I GKG
Sbjct: 22 AQAADLAHGGQVFSANCAACHLGGRNVVNPAKTLQKADLDQYGMASIEAITTQVTNGKGA 81
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP FG++L +DI +A +V Q++KGW
Sbjct: 82 MP------------AFGSKLSADDIADVASYVLDQSEKGW 109
>CYC6_PORYE (Q8WKJ8) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 110
Score = 64.3 bits (155), Expect = 5e-11
Identities = 37/101 (36%), Positives = 47/101 (45%), Gaps = 12/101 (11%)
Query: 2 IAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKG 61
IA D+ G +FS C CH G N I P TL L+ N ++T + I GK
Sbjct: 22 IAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNTIDAITYQVQNGKN 81
Query: 62 RMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP FG RL DEDI+ A +V Q++KGW
Sbjct: 82 AMP------------AFGGRLVDEDIEDAANYVLSQSEKGW 110
>CYC6_SYNLI (P00114) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 87
Score = 63.5 bits (153), Expect = 8e-11
Identities = 34/96 (35%), Positives = 49/96 (50%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D+ GA +FS C CH GGN++ TL + L++ G+++E+ I +GK MP
Sbjct: 2 DLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMNSEDAIIYQVQHGKNAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
F RL DE I+ +A +V QA KGW
Sbjct: 60 ----------AFAGRLTDEQIQDVAAYVLDQAAKGW 85
>CYC6_BUMFI (P00110) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 86
Score = 63.5 bits (153), Expect = 8e-11
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEI-YRVTYYGKGRMPG 65
DI+ G +F+ C CH G N+I P TL L+ NG++ I Y+VT
Sbjct: 2 DIENGERIFTANCAACHAGGNNVIMPEKTLKKDALEANGMNAVSAITYQVTN-------- 53
Query: 66 FGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
GK MP FG RL D DI+ +A +V Q+++GW
Sbjct: 54 -GKNAMP----AFGGRLSDSDIEDVANYVLSQSEQGW 85
>CYC6_PORTE (P00111) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 85
Score = 62.8 bits (151), Expect = 1e-10
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D+ G +FS C CH G N I P TL L+ N ++T + I GK MP
Sbjct: 2 DLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNTIDAITYQVQNGKNAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
FG RL DEDI+ A +V Q++KGW
Sbjct: 60 ----------AFGGRLVDEDIEDAANYVLSQSEKGW 85
>CYC6_SYNVU (Q9F1L9) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 112
Score = 62.4 bits (150), Expect = 2e-10
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
A D+ GA +FS C CH GGN++ TL + L++ G+ +E+ I +GK
Sbjct: 23 ALAADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSEDAIIYQVQHGKNA 82
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F RL DE I+ +A +V QA KGW
Sbjct: 83 MP------------AFAGRLTDEQIQDVAAYVLDQAAKGW 110
>CYC6_SYNEL (P56534) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 112
Score = 62.4 bits (150), Expect = 2e-10
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
A D+ GA +FS C CH GGN++ TL + L++ G+ +E+ I +GK
Sbjct: 23 ALAADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSEDAIIYQVQHGKNA 82
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F RL DE I+ +A +V QA KGW
Sbjct: 83 MP------------AFAGRLTDEQIQDVAAYVLDQAAKGW 110
>CYC6_SYNY3 (P46445) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 120
Score = 61.6 bits (148), Expect = 3e-10
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 3 AQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGR 62
A D+ G +F+ C CH+ G N I P TL DL+ NG ++ I G G
Sbjct: 33 ALAADLAHGKAIFAGNCAACHNGGLNAINPSKTLKMADLEANGKNSVAAIVAQITNGNGA 92
Query: 63 MPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MPG F R+ D D++ +A +V QA+KGW
Sbjct: 93 MPG------------FKGRISDSDMEDVAAYVLDQAEKGW 120
>CYC6_PORPU (P51200) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 110
Score = 61.6 bits (148), Expect = 3e-10
Identities = 38/102 (37%), Positives = 50/102 (48%), Gaps = 14/102 (13%)
Query: 2 IAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEI-YRVTYYGK 60
+A D+ G +FS C CH G N I P TL L+ N ++ + I Y+VT
Sbjct: 22 VAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNGIDAITYQVTN--- 78
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
GK MP FG RL DEDI+ A +V Q++KGW
Sbjct: 79 ------GKNAMP----AFGGRLVDEDIEDAANYVLSQSEKGW 110
>CYC6_CYACA (Q9TLW1) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 109
Score = 61.6 bits (148), Expect = 3e-10
Identities = 32/101 (31%), Positives = 47/101 (45%), Gaps = 13/101 (12%)
Query: 2 IAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKG 61
+ + +++ G +FS C CH G N+I P TL + L+ N + I GK
Sbjct: 22 VVYSANLEHGEQIFSANCAACHAGGNNVIMPEKTLKAEALEANNIKNISAIANQVKNGKN 81
Query: 62 RMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F +RL D DI+ +A +V +ADKGW
Sbjct: 82 AMPSF-------------SRLSDSDIEDVANYVLSKADKGW 109
>CYC6_PETFA (P00108) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 85
Score = 61.2 bits (147), Expect = 4e-10
Identities = 36/98 (36%), Positives = 50/98 (50%), Gaps = 14/98 (14%)
Query: 6 IDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEI-YRVTYYGKGRMP 64
+DI G ++F+ C CH G N+I P TL L+ N ++ + I Y+VT
Sbjct: 1 VDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALEENEMNNIKSITYQVTN------- 53
Query: 65 GFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
GK MP FG RL + DI+ +A FV Q+ KGW
Sbjct: 54 --GKNAMP----AFGGRLSETDIEDVANFVISQSQKGW 85
>CYC6_ALAES (P00109) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 86
Score = 61.2 bits (147), Expect = 4e-10
Identities = 38/98 (38%), Positives = 49/98 (49%), Gaps = 14/98 (14%)
Query: 6 IDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEI-YRVTYYGKGRMP 64
IDI G +F+ C CH G N+I P TL L N + + I Y+VT
Sbjct: 1 IDINNGENIFTANCSACHAGGNNVIMPEKTLKKDALADNKMVSVNAITYQVTN------- 53
Query: 65 GFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
GK MP FG+RL + DI+ +A FV Q+DKGW
Sbjct: 54 --GKNAMP----AFGSRLAETDIEDVANFVLTQSDKGW 85
>CYC6_ANAVA (P00113) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 111
Score = 59.7 bits (143), Expect = 1e-09
Identities = 35/102 (34%), Positives = 49/102 (47%), Gaps = 12/102 (11%)
Query: 1 SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 60
S A D+ GA +FS C CH G N++Q TL +DL++ G+ + E I GK
Sbjct: 21 SPALAADVANGAKIFSANCASCHAGGKNLVQAQKTLKKEDLEKFGMYSAEAIIAQVTNGK 80
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F RL+ + I+ +A +V QADK W
Sbjct: 81 NAMP------------AFKGRLKPDQIEDVAAYVLGQADKSW 110
>CYC6_APHFL (P00116) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 87
Score = 58.2 bits (139), Expect = 3e-09
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D GA LF C CH GGN++ TL + L++ + + + I +GKG MP
Sbjct: 2 DTVSGAALFKANCAQCHVGGGNLVNRAKTLKKEALEKYNMYSAKAIIAQVTHGKGAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
FG RL+ E I+ +A +V QAD GW
Sbjct: 60 ----------AFGIRLKAEQIENVAAYVLEQADNGW 85
>CYC6_SYNP6 (P07497) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 85
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D+ G +FS C CH G N++ P TL DL G+ + E I GKG MP
Sbjct: 2 DLAHGGQVFSANCASCHLGGRNVVNPAKTLEKADLDEYGMASIEAITTQVTNGKGAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
FGA+L +DI+ +A + Q+ K W
Sbjct: 60 ----------AFGAKLSADDIEGVASYALDQSGKEW 85
>CYC6_PLEBO (P00117) Cytochrome c6 (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 85
Score = 56.6 bits (135), Expect = 1e-08
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 7 DIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGF 66
D G +F+ C CH +GG I TL L NG DT E I GKG MP
Sbjct: 2 DAAAGGKVFNANCAACHASGGGQINGAKTLKKNALTANGKDTVEAIVAQVTNGKGAMP-- 59
Query: 67 GKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
F RL D+ I+ +A +V +A+KGW
Sbjct: 60 ----------AFKGRLSDDQIQSVALYVLDKAEKGW 85
>CY6L_ANASP (Q8Z0D7) Cytochrome c6-like precursor
Length = 111
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/92 (34%), Positives = 47/92 (50%), Gaps = 12/92 (13%)
Query: 11 GATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGFGKEC 70
G +FS C GCH G NII+ G L K L++ G+D+ E I + GK M +
Sbjct: 31 GEQIFSVHCAGCHINGSNIIRRGKNLQKKTLKKYGMDSLEAIEAIVTNGKNNMSAYKD-- 88
Query: 71 MPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
RL +++I+ +A +V QA+KGW
Sbjct: 89 ----------RLSEQEIQDVAAYVLEQAEKGW 110
>CYC6_ANASP (P28596) Cytochrome c6 precursor (Soluble cytochrome f)
(Cytochrome c553) (Cytochrome c-553)
Length = 111
Score = 53.9 bits (128), Expect = 6e-08
Identities = 34/102 (33%), Positives = 46/102 (44%), Gaps = 12/102 (11%)
Query: 1 SIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYRVTYYGK 60
S A D GA +FS C CH G N++Q TL DL++ G+ + E I GK
Sbjct: 21 SPALAADSVNGAKIFSANCASCHAGGKNLVQAQKTLKKADLEKYGMYSAEAIIAQVTNGK 80
Query: 61 GRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGW 102
MP F RL+ E I+ +A +V +AD W
Sbjct: 81 NAMP------------AFKGRLKPEQIEDVAAYVLGKADADW 110
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,528,347
Number of Sequences: 164201
Number of extensions: 567172
Number of successful extensions: 1263
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1194
Number of HSP's gapped (non-prelim): 71
length of query: 110
length of database: 59,974,054
effective HSP length: 86
effective length of query: 24
effective length of database: 45,852,768
effective search space: 1100466432
effective search space used: 1100466432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC149576.1