BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149546.1 - phase: 0
(133 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TRHY_SHEEP (P22793) Trichohyalin 32 0.24
TRHY_HUMAN (Q07283) Trichohyalin 32 0.32
T2FB_YEAST (P41896) Transcription initiation factor IIF, beta su... 31 0.54
USO1_YEAST (P25386) Intracellular protein transport protein USO1 30 1.2
TRHY_RABIT (P37709) Trichohyalin 30 1.2
YF57_ARCFU (O28715) Hypothetical protein AF1557 29 1.6
YG72_CLOPE (Q8XJT1) Hypothetical UPF0144 protein CPE1672 29 2.1
SEC3_YEAST (P33332) Exocyst complex component SEC3 (PSL1 protein) 29 2.1
CO3_HUMAN (P01024) Complement C3 precursor [Contains: C3a anaphy... 29 2.1
SLY_MOUSE (Q8K352) SH3 protein expressed in lymphocytes 28 2.7
SG3_HUMAN (Q8WXD2) Secretogranin III precursor (SgIII) (UNQ2502/... 28 2.7
MUTS_SYNPX (Q7UA23) DNA mismatch repair protein mutS 28 2.7
R114_YEAST (P32841) Meiotic recombination protein REC114 28 3.5
PPK_CAMJE (Q9PMU0) Polyphosphate kinase (EC 2.7.4.1) (Polyphosph... 28 3.5
MGLA_TREPA (Q56342) Galactoside transport ATP-binding protein mg... 28 3.5
M4K6_MOUSE (Q9JM52) Mitogen-activated protein kinase kinase kina... 28 3.5
M4K6_HUMAN (Q8N4C8) Mitogen-activated protein kinase kinase kina... 28 3.5
CYP8_CAEEL (P52016) Peptidyl-prolyl cis-trans isomerase 8 (EC 5.... 28 3.5
ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associate... 28 3.5
ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associate... 28 3.5
>TRHY_SHEEP (P22793) Trichohyalin
Length = 1549
Score = 32.0 bits (71), Expect = 0.24
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYLK 58
R YL+ ++ E+ + E KR RERQ L +++QR+ + + + L+
Sbjct: 616 RERQYLEKVELQEEEQVQRQEREKRRQERERQYLEKELQRQEERLQEEEQLLR 668
Score = 30.4 bits (67), Expect = 0.70
Identities = 20/78 (25%), Positives = 39/78 (49%), Gaps = 5/78 (6%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSR-QMQRKLSKSERDNMYLKWGISMS 64
R YL+ ++ E+ + E KR RERQ L + ++QR+ + +R+ K +
Sbjct: 678 RERQYLEKVELQEEEQLQREEREKRRQERERQYLEKEELQRQEERLQRE----KEQLQRE 733
Query: 65 SKHRRLQLAHRLWSETDI 82
+ +R Q+ R + E ++
Sbjct: 734 DREKRRQVRERKYLEEEL 751
Score = 29.3 bits (64), Expect = 1.6
Identities = 27/112 (24%), Positives = 46/112 (40%), Gaps = 12/112 (10%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSR----------QMQRKLSKSERDNM 55
R YL+ ++ E+ + E KR RERQ L + + +R+ + ER+
Sbjct: 588 REKQYLEKVELQEEEQLQRQEREKRRQERERQYLEKVELQEEEQVQRQEREKRRQERERQ 647
Query: 56 YLKWGISMSSKHRRLQLAHRLWSETDINHVRESATIVAKLVGTVEPDQAFKE 107
YL+ + + RLQ +L E +E + V E +Q +E
Sbjct: 648 YLE--KELQRQEERLQEEEQLLREEREKRRQERERQYLEKVELQEEEQLQRE 697
Score = 28.1 bits (61), Expect = 3.5
Identities = 21/76 (27%), Positives = 32/76 (41%), Gaps = 4/76 (5%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYLKWGISMSS 65
+R S Q+LE + E R R E Q+L Q + K+ E D + +
Sbjct: 915 KRDSQFPAEQLLEREQQKETERRDRKFREEEQLLKGQREEKIRYLEEDRKFRE----EEQ 970
Query: 66 KHRRLQLAHRLWSETD 81
+ RRL+ +L E D
Sbjct: 971 QLRRLEREQQLRQERD 986
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/63 (26%), Positives = 29/63 (45%), Gaps = 10/63 (15%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSR----------QMQRKLSKSERDNM 55
R YL+ ++ E+ + E KR RERQ L + + +R+ + ER+
Sbjct: 504 RERQYLEKVELQEEEQLQREEREKRRQERERQYLEKVELQEEEQLQRQEREKRRQEREKQ 563
Query: 56 YLK 58
YL+
Sbjct: 564 YLE 566
Score = 27.3 bits (59), Expect = 6.0
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSR---QMQRKLSKSERD 53
R YL+ ++ E+ + E KR RERQ L + Q + +L + ER+
Sbjct: 476 REKQYLEKVELREEEQLQRQEREKRRQERERQYLEKVELQEEEQLQREERE 526
Score = 26.9 bits (58), Expect = 7.8
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSR----------QMQRKLSKSERDNM 55
R YL+ ++ E+ + E KR RE+Q L + + +R+ + ER+
Sbjct: 560 REKQYLEKVELQEEEQLQRQERQKRRQEREKQYLEKVELQEEEQLQRQEREKRRQERERQ 619
Query: 56 YL-------KWGISMSSKHRRLQLAHRLWSETDINHVRE 87
YL + + + +R Q R + E ++ E
Sbjct: 620 YLEKVELQEEEQVQRQEREKRRQERERQYLEKELQRQEE 658
>TRHY_HUMAN (Q07283) Trichohyalin
Length = 1898
Score = 31.6 bits (70), Expect = 0.32
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 12 KDNQILEDGRTLTPESSKRYLRRE-------RQMLSRQMQRKLSKSERDNMYLKWGISMS 64
++ + +ED + L + ++ LR+E Q+L + +++L + ERD +L+ +
Sbjct: 1549 QERKFMEDEQQLRRQEGQQQLRQEDRKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLR 1608
Query: 65 SKHRRLQLAH 74
+ R QL H
Sbjct: 1609 RQEREQQLRH 1618
Score = 30.4 bits (67), Expect = 0.70
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 16 ILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYLKWGISMSSKHRRLQLAHR 75
+L+D RT E +R+ R+RQ+ QR+ K + L G S K RL+ R
Sbjct: 109 LLQDRRT--EEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQRDR 166
Score = 30.4 bits (67), Expect = 0.70
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 2 EVELRRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYLK 58
E ++RR ++ + LE+ + L E +++ R E Q+L + +++L + ERD +L+
Sbjct: 1392 EQQVRRQE--RERKFLEEEQQLRQERHRKF-REEEQLLQEREEQQLHRQERDRKFLE 1445
Score = 27.7 bits (60), Expect = 4.6
Identities = 15/58 (25%), Positives = 25/58 (42%), Gaps = 1/58 (1%)
Query: 12 KDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYLKWGISMSSKHRR 69
K+ Q LE+ L + L+ E L +R+ + RD + +W + K RR
Sbjct: 847 KELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRQEQRRDQKW-RWQLEEERKRRR 903
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/83 (20%), Positives = 41/83 (48%), Gaps = 2/83 (2%)
Query: 6 RRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYL--KWGISM 63
++L + +D + E+ + L ++ R+ER R+ +++L + ER+ +L + +
Sbjct: 1614 QQLRHDRDRKFREEEQLLQEGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRR 1673
Query: 64 SSKHRRLQLAHRLWSETDINHVR 86
R+ + +L ET+ +R
Sbjct: 1674 QELERKFREEEQLRQETEQEQLR 1696
>T2FB_YEAST (P41896) Transcription initiation factor IIF, beta
subunit (TFIIF-beta) (TFIIF medium subunit)
(Transcription factor G 54 kDa subunit)
Length = 400
Score = 30.8 bits (68), Expect = 0.54
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 15 QILEDGRTLTPESSKRYLRRERQMLS---RQMQRKLSKSERDNMYLKWGISMSSKHRRLQ 71
+++E+ T ++ K+Y +R++++ + +Q Q L K ER+ K ++ R +
Sbjct: 127 KVVENEYVFTEQNLKKYQQRKKELEADPEKQRQAYLKKQEREEELKKKQQQQKRRNNRKK 186
Query: 72 LAHRLWSETD--INHVRESATIVAK--LVGTV 99
HR+ ++ D ++ TI K +VGTV
Sbjct: 187 FNHRVMTDRDGRDRYIPYVKTIPKKTAIVGTV 218
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 29.6 bits (65), Expect = 1.2
Identities = 14/54 (25%), Positives = 32/54 (58%), Gaps = 1/54 (1%)
Query: 2 EVELRRLSYLKDNQILEDGR-TLTPESSKRYLRRERQMLSRQMQRKLSKSERDN 54
E++++ ++ K+ ++L +G T+T E S++ E +++ Q + +L E DN
Sbjct: 1357 EIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDN 1410
>TRHY_RABIT (P37709) Trichohyalin
Length = 1407
Score = 29.6 bits (65), Expect = 1.2
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 4 ELRRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERD 53
ELR+ L+D ++ E+ + L +R R+ER+ R+ ++ L + E++
Sbjct: 594 ELRQEEQLRDRKLREEEQLLQEREEERLRRQERERKLREEEQLLRQEEQE 643
Score = 29.3 bits (64), Expect = 1.6
Identities = 30/127 (23%), Positives = 54/127 (41%), Gaps = 7/127 (5%)
Query: 2 EVELRR---LSYLKDNQIL---EDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNM 55
E ELRR + ++ Q+L E+ R E +++ E Q+L + + + + ERD
Sbjct: 1249 EQELRRERDRKFREEEQLLQEREEERLRRQERARKLREEEEQLLFEEQEEQRLRQERDRR 1308
Query: 56 Y-LKWGISMSSKHRRLQLAHRLWSETDINHVRESATIVAKLVGTVEPDQAFKEMFGLNFA 114
Y + + K RRL+ R E RE +L E +Q +++ F
Sbjct: 1309 YRAEEQFAREEKSRRLERELRQEEEQRRRRERERKFREEQLRRQQEEEQRRRQLRERQFR 1368
Query: 115 PRRRRKK 121
+ R++
Sbjct: 1369 EDQSRRQ 1375
>YF57_ARCFU (O28715) Hypothetical protein AF1557
Length = 167
Score = 29.3 bits (64), Expect = 1.6
Identities = 20/77 (25%), Positives = 38/77 (48%), Gaps = 11/77 (14%)
Query: 35 ERQMLSRQMQRKLSKSERDNMYL-----------KWGISMSSKHRRLQLAHRLWSETDIN 83
ER +L +++RKL++ ER+ + L K I+M +K L+ H+L + I
Sbjct: 3 ERDILIERLERKLAEKERELVELRRMNREELEKIKREIAMEAKEEVLREVHKLLQNSQIQ 62
Query: 84 HVRESATIVAKLVGTVE 100
+ E + + +L +E
Sbjct: 63 RLSEVDSKIVELRKAME 79
>YG72_CLOPE (Q8XJT1) Hypothetical UPF0144 protein CPE1672
Length = 530
Score = 28.9 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 4 ELRRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERD 53
EL R+S L ED RTL + +R ++ E ML ++++ K +K E D
Sbjct: 153 ELERISNLSS----EDARTLLLDEVRREIKHESAMLIKELETK-AKEEAD 197
>SEC3_YEAST (P33332) Exocyst complex component SEC3 (PSL1 protein)
Length = 1336
Score = 28.9 bits (63), Expect = 2.1
Identities = 25/95 (26%), Positives = 42/95 (43%), Gaps = 17/95 (17%)
Query: 2 EVELRRLSYLKDNQI--------LEDGRTLTPESSKRY--LRRERQMLSRQMQRKLSKSE 51
E ELRRL K Q+ LE+ R + E KR L +RQ+ + +R++
Sbjct: 339 EAELRRLEEQKRLQLQKENEMKRLEEERRIKQEERKRQMELEHQRQLEEEERKRQMELEA 398
Query: 52 RDNMYLKWGISMSSKHRRLQLAHRLWSETDINHVR 86
+ M LK + R+ + RL E ++ ++
Sbjct: 399 KKQMELK-------RQRQFEEEQRLKKERELLEIQ 426
>CO3_HUMAN (P01024) Complement C3 precursor [Contains: C3a
anaphylatoxin]
Length = 1663
Score = 28.9 bits (63), Expect = 2.1
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 13 DNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYLKWGISMSSKHRRLQL 72
D I+ +T+ S + + ++R +S R+ K E YL WG+S + L
Sbjct: 1559 DEYIMAIEQTIKSGSDEVQVGQQRTFISPIKCREALKLEEKKHYLMWGLSSDFWGEKPNL 1618
Query: 73 AHRLWSETDINH 84
++ + +T + H
Sbjct: 1619 SYIIGKDTWVEH 1630
>SLY_MOUSE (Q8K352) SH3 protein expressed in lymphocytes
Length = 380
Score = 28.5 bits (62), Expect = 2.7
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 11 LKDNQILEDGRTLTPESS----KRYLRRERQMLSRQMQRKLSK 49
L DN +D LTPE S K+ ++ R ++SR M RK+ K
Sbjct: 48 LDDNIPEDDSGVLTPEDSGKSGKKLGKKWRAVISRTMNRKMGK 90
>SG3_HUMAN (Q8WXD2) Secretogranin III precursor (SgIII)
(UNQ2502/PRO5990)
Length = 468
Score = 28.5 bits (62), Expect = 2.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 22 TLTPESSKRYLRRERQMLSRQMQRKLSKSERDNM 55
T++PE YL +M++ Q + KL K+ DN+
Sbjct: 318 TISPEEGVSYLENLDEMIALQTKNKLEKNATDNI 351
>MUTS_SYNPX (Q7UA23) DNA mismatch repair protein mutS
Length = 900
Score = 28.5 bits (62), Expect = 2.7
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 8 LSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQR--KLSKSERDNMY---LKWGIS 62
L+YL+D Q LE+ ++ E R + +L Q +R +L+ ++RD L W I
Sbjct: 330 LAYLRDTQPLEENASVPLEVPAIVQRGDALVLDAQTRRNLELTATQRDGSLQGSLLWAID 389
Query: 63 MSSKHRRLQLAHRLWSET---DINHVRESATIVAKLVGTVEPDQAFKEM 108
+ + R W E D++ +R+ +V+ LV QA + +
Sbjct: 390 RTLTAMGGRCLRR-WLEAPLMDLDAIRQRQQLVSTLVEQRNLRQALRRL 437
>R114_YEAST (P32841) Meiotic recombination protein REC114
Length = 435
Score = 28.1 bits (61), Expect = 3.5
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 36 RQMLSRQMQRKLSKSERDNMYLKWGISMSSKHRRLQLAHRLWSETDINHVRES 88
+ M+ QR +SER++ +++ H +Q+A ++W TD+N V+ S
Sbjct: 180 QNMIMDFSQRYQEESERESNNRS---NITLPHDSIQIAQQIWPNTDLNVVQSS 229
>PPK_CAMJE (Q9PMU0) Polyphosphate kinase (EC 2.7.4.1)
(Polyphosphoric acid kinase) (ATP-polyphosphate
phosphotransferase)
Length = 694
Score = 28.1 bits (61), Expect = 3.5
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 29 KRYLRRERQMLSRQMQRKLSKSERDNMYLK 58
++YL +E+++L R S+ E++N+++K
Sbjct: 83 RKYLHQEKELLERYFNEITSELEKENLFIK 112
>MGLA_TREPA (Q56342) Galactoside transport ATP-binding protein mglA
homolog
Length = 496
Score = 28.1 bits (61), Expect = 3.5
Identities = 16/49 (32%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
Query: 10 YLKDN-QILEDGRTLTPESSKRYLRRERQMLSRQMQRKLSKSERDNMYL 57
Y KD QIL DG + +S K L M+ +++ + L ++ DN++L
Sbjct: 54 YAKDTGQILVDGSPVDFQSPKEALENGVAMVHQELNQCLDRTVMDNLFL 102
>M4K6_MOUSE (Q9JM52) Mitogen-activated protein kinase kinase kinase
kinase 6 (EC 2.7.1.37) (MAPK/ERK kinase kinase kinase 6)
(MEK kinase kinase 6) (MEKKK 6) (Misshapen/NIK-related
kinase) (GCK family kinase MiNK)
Length = 1308
Score = 28.1 bits (61), Expect = 3.5
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 2 EVELRRLSYLKDNQILEDGRTLTPESSKRYLRRERQML------SRQMQRKLSKSERDNM 55
E E R+L + + LED + L E +R RE++ RQ +R + ++++
Sbjct: 415 EREQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHA 474
Query: 56 YLKWGISMSSKHRRLQ 71
YLK + + ++LQ
Sbjct: 475 YLK-SLQQQQQQQQLQ 489
>M4K6_HUMAN (Q8N4C8) Mitogen-activated protein kinase kinase kinase
kinase 6 (EC 2.7.1.37) (MAPK/ERK kinase kinase kinase 6)
(MEK kinase kinase 6) (MEKKK 6) (Misshapen/NIK-related
kinase) (GCK family kinase MiNK)
Length = 1332
Score = 28.1 bits (61), Expect = 3.5
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 2 EVELRRLSYLKDNQILEDGRTLTPESSKRYLRRERQML------SRQMQRKLSKSERDNM 55
E E R+L + + LED + L E +R RE++ RQ +R + ++++
Sbjct: 415 EREQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHA 474
Query: 56 YLKWGISMSSKHRRLQ 71
YLK + + ++LQ
Sbjct: 475 YLK-SLQQQQQQQQLQ 489
>CYP8_CAEEL (P52016) Peptidyl-prolyl cis-trans isomerase 8 (EC
5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-8)
Length = 466
Score = 28.1 bits (61), Expect = 3.5
Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 2/64 (3%)
Query: 26 ESSKRYLRRERQMLSRQMQRKLS--KSERDNMYLKWGISMSSKHRRLQLAHRLWSETDIN 83
E ++R R E++ + RQ QR+L K E + + + S +RR + + R SE D +
Sbjct: 375 EEAERNARLEKERVERQNQRELERQKQEAERELKRQQENEESGNRRRRRSSRSGSENDES 434
Query: 84 HVRE 87
+ E
Sbjct: 435 ELEE 438
>ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associated
protein homolog
Length = 3477
Score = 28.1 bits (61), Expect = 3.5
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 1 MEVELRRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKL---SKSERDNMYL 57
M ELR+ Y++ ++ R ++ K Y R++ +L+ Q K K ER N
Sbjct: 1477 MHKELRKYIYIRSCVVIIQKRFRCFQAQKLYKRKKESILTIQKYYKAYLKGKIERTNYLQ 1536
Query: 58 K--WGISMSSKHRRLQLAHRLWSE 79
K I + + RRL+ AH L+ +
Sbjct: 1537 KRAAAIQLQAAFRRLK-AHNLYRQ 1559
>ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associated
protein (Abnormal spindle protein homolog) (Asp homolog)
Length = 3477
Score = 28.1 bits (61), Expect = 3.5
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 1 MEVELRRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSRQMQRKL---SKSERDNMYL 57
M ELR+ Y++ ++ R ++ K Y RR+ +L+ Q K K ER N
Sbjct: 1477 MHKELRKYIYIRSCVVIIQKRFRCFQAQKLYKRRKESILTIQKYYKAYLKGKIERTNYLQ 1536
Query: 58 K--WGISMSSKHRRLQLAHRL 76
K I + + RRL+ AH L
Sbjct: 1537 KRAAAIQLQAAFRRLK-AHNL 1556
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.131 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,919,512
Number of Sequences: 164201
Number of extensions: 452425
Number of successful extensions: 1687
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1590
Number of HSP's gapped (non-prelim): 117
length of query: 133
length of database: 59,974,054
effective HSP length: 109
effective length of query: 24
effective length of database: 42,076,145
effective search space: 1009827480
effective search space used: 1009827480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC149546.1