BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149496.4 - phase: 0
(475 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MYS_AEQIR (P24733) Myosin heavy chain, striated muscle 38 0.065
ERC1_HUMAN (Q8IUD2) ERC protein 1 (ELKS protein) 35 0.32
CING_XENLA (Q9PTD7) Cingulin 35 0.55
HCR_HUMAN (Q8TD31) Alpha helical coiled-coil rod protein (Putati... 34 0.94
RH25_HUMAN (P42331) Rho-GTPase-activating protein 25 33 1.2
PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin) 33 1.6
RA50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase 33 2.1
RA13_SCHPO (P28706) DNA repair protein rad13 33 2.1
HCR_PIG (Q9TSV3) Alpha helical coiled-coil rod protein (Fragment) 33 2.1
STN3_HUMAN (Q9NZ72) Stathmin 3 (SCG10-like protein) 32 2.7
MAPA_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A) (... 32 2.7
HCR_PONPY (Q8HZ58) Alpha helical coiled-coil rod protein 32 2.7
HCR_PANTR (Q8HZ60) Alpha helical coiled-coil rod protein 32 2.7
HCR_PANPA (Q8HZ57) Alpha helical coiled-coil rod protein 32 2.7
YN78_BACHD (Q9KAB2) Hypothetical UPF0144 protein BH2378 32 3.6
YCF2_OENVI (P31569) Protein ycf2 (Fragment) 32 3.6
YCF2_OENPI (P31568) Protein ycf2 (Fragment) 32 3.6
TRI_CHLNI (Q7M3Y3) Troponin I (TnI) 32 3.6
MYSA_DROME (P05661) Myosin heavy chain, muscle 32 3.6
LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 (... 32 3.6
>MYS_AEQIR (P24733) Myosin heavy chain, striated muscle
Length = 1938
Score = 37.7 bits (86), Expect = 0.065
Identities = 21/86 (24%), Positives = 39/86 (44%)
Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
EE Q + EA +M +R C + E + LEQ + D +A N+R+ E
Sbjct: 1655 EEEQRQRDEARESYNMAERRCTLMSGEVEELRAALEQAERARKASDNELADANDRVNELT 1714
Query: 450 AALDRIPGRKKKRMDLFDGPHSDFED 475
+ + + G+K+K + +D ++
Sbjct: 1715 SQVSSVQGQKRKLEGDINAMQTDLDE 1740
>ERC1_HUMAN (Q8IUD2) ERC protein 1 (ELKS protein)
Length = 1116
Score = 35.4 bits (80), Expect = 0.32
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 391 EYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
E +R+ EREI +K E K + + ++ +L++ + KD IA+L ++K+++
Sbjct: 732 EMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIAELERQVKDQN 790
>CING_XENLA (Q9PTD7) Cingulin
Length = 1360
Score = 34.7 bits (78), Expect = 0.55
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 389 KEEYQERLAEAEREIHMWKR----ECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNER 444
K+ ++E + + ERE+ + K E +D++ E + LEQ+A +++ + K+N+R
Sbjct: 809 KQRHEETVHQRERELSVLKGALKDEVSGRDRETEKLRERLEQDALMTKRSYEELVKINKR 868
Query: 445 IKEKDAALDRI 455
++ + L+R+
Sbjct: 869 LESEKTDLERV 879
>HCR_HUMAN (Q8TD31) Alpha helical coiled-coil rod protein (Putative
gene 8 protein) (Pg8)
Length = 782
Score = 33.9 bits (76), Expect = 0.94
Identities = 28/102 (27%), Positives = 50/102 (48%), Gaps = 6/102 (5%)
Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
TLPR + + +IPL P ++ + RL ++ MW+R+ D+ G L
Sbjct: 23 TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81
Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
E S+Q +VI+ +L E R++E+ L ++K R++
Sbjct: 82 EGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLE 123
>RH25_HUMAN (P42331) Rho-GTPase-activating protein 25
Length = 638
Score = 33.5 bits (75), Expect = 1.2
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 386 PQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERI 445
P K +E + +R + ++E + + + YE + LE+E YD K V + + E+
Sbjct: 533 PGKKNSGEEEIDSLQRMVQELRKEIETQKQMYEEQIKNLEKENYDVWAKVVRLNEELEKE 592
Query: 446 KEKDAALD 453
K+K AAL+
Sbjct: 593 KKKSAALE 600
>PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin)
Length = 3336
Score = 33.1 bits (74), Expect = 1.6
Identities = 19/79 (24%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIK-EK 448
E++Q+ L A+++ + K+E Q+K+ D++ + L++EA + +++ +L E+ + EK
Sbjct: 725 EDHQKELNNAKQKTELMKQEFQRKETDWKVMKEELQREA--EEKLTLMLLELREKAESEK 782
Query: 449 DAALDRIPGRKKKRMDLFD 467
+++ R+ + L D
Sbjct: 783 QTIINKFELREAEMRQLQD 801
>RA50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase
Length = 882
Score = 32.7 bits (73), Expect = 2.1
Identities = 25/102 (24%), Positives = 50/102 (48%), Gaps = 16/102 (15%)
Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLE--QEAYDSRQK--------DVIIA 439
EEY E+L E E+E+ +E KD + + L E E D + K + +I
Sbjct: 271 EEYLEKLKEKEKELEEQVKEITSIKKDVDAYLALKEFKNEYLDKKYKIEKELTRVEELIN 330
Query: 440 KLNERIK---EKDAALDRIPGRKKK---RMDLFDGPHSDFED 475
++ +RI+ EK++ +++ KK+ ++ + + H +E+
Sbjct: 331 EIQKRIEELNEKESEKEKLENEKKEILNKLAILEKDHQLYEE 372
>RA13_SCHPO (P28706) DNA repair protein rad13
Length = 1112
Score = 32.7 bits (73), Expect = 2.1
Identities = 26/79 (32%), Positives = 43/79 (53%), Gaps = 9/79 (11%)
Query: 373 LSSTV-PEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDS 431
LSS V PE+ LL + +EE R+AE E+E + E ++ + E QEA++
Sbjct: 679 LSSKVEPEVVEKLLDEEEEEMIIRMAEEEKEYDRFVSELNQRHETEE-----WNQEAFEK 733
Query: 432 RQKDVIIAKLNERIKEKDA 450
R K++ K +R +++DA
Sbjct: 734 RLKEL---KNQKRSEKRDA 749
>HCR_PIG (Q9TSV3) Alpha helical coiled-coil rod protein (Fragment)
Length = 427
Score = 32.7 bits (73), Expect = 2.1
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAER-EIHMWKRECQKKDKD---YETVMGL 423
TLPR V +IPL + P ++ ERL++ +R ++ MW++E K ++ + L
Sbjct: 19 TLPRMAPPWVSDIPL-VQPPAHQDVLERLSDNQRPQVTMWEKEVSGKGQEPGWRGRSVEL 77
Query: 424 LEQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
+A S+Q ++I +L E R++E+ L ++K R++
Sbjct: 78 AGSQAL-SQQAELISRQLQELRRLEEEVRVLRETSLQQKMRLE 119
>STN3_HUMAN (Q9NZ72) Stathmin 3 (SCG10-like protein)
Length = 180
Score = 32.3 bits (72), Expect = 2.7
Identities = 29/117 (24%), Positives = 52/117 (43%), Gaps = 25/117 (21%)
Query: 374 SSTVPEIPLPLLPQTK-----EEYQERLAEAE-----REIHMWKRECQKKDKDYETVMGL 423
S PE P+ P K EE Q+RL AE +E + K+ ++++ + E +
Sbjct: 62 SDLSPESPMLSSPPKKKDTSLEELQKRLEAAEERRKTQEAQVLKQLAERREHEREVLHKA 121
Query: 424 LEQEAYDSRQ---------------KDVIIAKLNERIKEKDAALDRIPGRKKKRMDL 465
LE+ SRQ ++ +A L ER++EK+ + K++R ++
Sbjct: 122 LEENNNFSRQAEEKLNYKMELSKEIREAHLAALRERLREKELHAAEVRRNKEQREEM 178
>MAPA_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)
(Proliferation-related protein p80) [Contains: MAP1 light
chain LC2]
Length = 2805
Score = 32.3 bits (72), Expect = 2.7
Identities = 21/73 (28%), Positives = 37/73 (49%), Gaps = 3/73 (4%)
Query: 398 EAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKDAAL---DR 454
+ + +H+ +++DK E LEQ+ QKD + ++ ++EKD AL D+
Sbjct: 1389 QKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDK 1448
Query: 455 IPGRKKKRMDLFD 467
IP K K ++ D
Sbjct: 1449 IPEEKDKALEQKD 1461
Score = 31.2 bits (69), Expect = 6.1
Identities = 20/78 (25%), Positives = 39/78 (49%), Gaps = 3/78 (3%)
Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
E+ + L ++++ + ++KDK E LEQ+ QKD + ++ +++KD
Sbjct: 1423 EQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKD 1482
Query: 450 AAL---DRIPGRKKKRMD 464
L ++IP K K +D
Sbjct: 1483 RVLEQKEKIPEEKDKALD 1500
>HCR_PONPY (Q8HZ58) Alpha helical coiled-coil rod protein
Length = 782
Score = 32.3 bits (72), Expect = 2.7
Identities = 28/102 (27%), Positives = 49/102 (47%), Gaps = 6/102 (5%)
Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
TLPR + + +IPL P ++ + RL ++ MW+R+ D+ G L
Sbjct: 23 TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81
Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
E S+Q +VI +L E R++E+ L ++K R++
Sbjct: 82 EGSQALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLE 123
>HCR_PANTR (Q8HZ60) Alpha helical coiled-coil rod protein
Length = 782
Score = 32.3 bits (72), Expect = 2.7
Identities = 28/102 (27%), Positives = 49/102 (47%), Gaps = 6/102 (5%)
Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
TLPR + + +IPL P ++ + RL ++ MW+R+ D+ G L
Sbjct: 23 TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81
Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
E S+Q +VI +L E R++E+ L ++K R++
Sbjct: 82 EGSQALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLE 123
>HCR_PANPA (Q8HZ57) Alpha helical coiled-coil rod protein
Length = 782
Score = 32.3 bits (72), Expect = 2.7
Identities = 28/102 (27%), Positives = 49/102 (47%), Gaps = 6/102 (5%)
Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
TLPR + + +IPL P ++ + RL ++ MW+R+ D+ G L
Sbjct: 23 TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81
Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
E S+Q +VI +L E R++E+ L ++K R++
Sbjct: 82 EGSQALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLE 123
>YN78_BACHD (Q9KAB2) Hypothetical UPF0144 protein BH2378
Length = 521
Score = 32.0 bits (71), Expect = 3.6
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 387 QTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLE---------QEAYDSRQKDVI 437
+ K+E + EAEREI + E QK++ +L+ +E+ D R++
Sbjct: 62 EVKDEVHKLRTEAEREIRERRNEIQKQENRLVQKEEILDRKSETLDKKEESLDKREES-- 119
Query: 438 IAKLNERIKEKDAALDRIPGRKKKRMDLFDG 468
+ K +I+E D+ ++ I +++ ++ G
Sbjct: 120 LTKKQRQIEEMDSKVEEILNKQQVELERISG 150
>YCF2_OENVI (P31569) Protein ycf2 (Fragment)
Length = 630
Score = 32.0 bits (71), Expect = 3.6
Identities = 23/93 (24%), Positives = 44/93 (46%), Gaps = 9/93 (9%)
Query: 372 FLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDS 431
FL EIP +P+ ++E E E E+ +W E + + D E V+ ++
Sbjct: 393 FLLDCEAEIPAEEIPEEEDELPEDALET--EVAVWGVEEEGEADDEEDVL-------LEA 443
Query: 432 RQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD 464
+Q+D ++ + +E + E++ LD K+ D
Sbjct: 444 QQEDELLEEEDEELDEEEDELDEEEEEPKEEED 476
>YCF2_OENPI (P31568) Protein ycf2 (Fragment)
Length = 721
Score = 32.0 bits (71), Expect = 3.6
Identities = 23/93 (24%), Positives = 44/93 (46%), Gaps = 9/93 (9%)
Query: 372 FLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDS 431
FL EIP +P+ ++E E E E+ +W E + + D E V+ ++
Sbjct: 482 FLLDCEAEIPAEEIPEEEDELPEDALET--EVAVWGVEEEGEADDEEDVL-------LEA 532
Query: 432 RQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD 464
+Q+D ++ + +E + E++ LD K+ D
Sbjct: 533 QQEDELLEEEDEELDEEEDELDEEEEEPKEEED 565
>TRI_CHLNI (Q7M3Y3) Troponin I (TnI)
Length = 292
Score = 32.0 bits (71), Expect = 3.6
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
+++ +RLA E +++ W+ + +K+D + + L + D++ K + + ++ + +
Sbjct: 201 KDFHKRLASLEEDVYDWEAKIRKQDFE----INELTLKVNDTKGK--FVKPVLRKVNKTE 254
Query: 450 AALDRIPGRKKKRMDLFDGPHSDFE 474
+ LD+I ++ K+ D D S E
Sbjct: 255 SKLDKIQRKEAKKSDFRDNLKSSRE 279
>MYSA_DROME (P05661) Myosin heavy chain, muscle
Length = 1962
Score = 32.0 bits (71), Expect = 3.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 393 QERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKDAAL 452
QE +A+ ER ++ Q+KDK+ ++ LE E V++ K +IKE A +
Sbjct: 1062 QEAVADLERNKKELEQTIQRKDKELSSITAKLEDE-------QVVVLKHQRQIKELQARI 1114
Query: 453 DRI 455
+ +
Sbjct: 1115 EEL 1117
Score = 32.0 bits (71), Expect = 3.6
Identities = 22/86 (25%), Positives = 36/86 (41%)
Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
EE Q +A ++ + +R + E LLEQ RQ + +A +E++ E
Sbjct: 1657 EEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVS 1716
Query: 450 AALDRIPGRKKKRMDLFDGPHSDFED 475
A I K+K HSD ++
Sbjct: 1717 AQNASISAAKRKLESELQTLHSDLDE 1742
>LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2
(Protein LAPSER1)
Length = 669
Score = 32.0 bits (71), Expect = 3.6
Identities = 18/68 (26%), Positives = 34/68 (49%)
Query: 385 LPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNER 444
L Q K + Q+ A+ +E +R C +++ + LE+ ++ QK I+ L ++
Sbjct: 397 LQQEKRQLQDDFAQLLQEREQLERRCATLEREQRELGPRLEETKWEVCQKSGEISLLKQQ 456
Query: 445 IKEKDAAL 452
+KE A L
Sbjct: 457 LKESQAEL 464
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.138 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,786,816
Number of Sequences: 164201
Number of extensions: 2711308
Number of successful extensions: 7345
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 7274
Number of HSP's gapped (non-prelim): 103
length of query: 475
length of database: 59,974,054
effective HSP length: 114
effective length of query: 361
effective length of database: 41,255,140
effective search space: 14893105540
effective search space used: 14893105540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC149496.4