Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149496.4 - phase: 0 
         (475 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MYS_AEQIR (P24733) Myosin heavy chain, striated muscle                 38  0.065
ERC1_HUMAN (Q8IUD2) ERC protein 1 (ELKS protein)                       35  0.32
CING_XENLA (Q9PTD7) Cingulin                                           35  0.55
HCR_HUMAN (Q8TD31) Alpha helical coiled-coil rod protein (Putati...    34  0.94
RH25_HUMAN (P42331) Rho-GTPase-activating protein 25                   33  1.2
PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin)            33  1.6
RA50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase        33  2.1
RA13_SCHPO (P28706) DNA repair protein rad13                           33  2.1
HCR_PIG (Q9TSV3) Alpha helical coiled-coil rod protein (Fragment)      33  2.1
STN3_HUMAN (Q9NZ72) Stathmin 3 (SCG10-like protein)                    32  2.7
MAPA_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A) (...    32  2.7
HCR_PONPY (Q8HZ58) Alpha helical coiled-coil rod protein               32  2.7
HCR_PANTR (Q8HZ60) Alpha helical coiled-coil rod protein               32  2.7
HCR_PANPA (Q8HZ57) Alpha helical coiled-coil rod protein               32  2.7
YN78_BACHD (Q9KAB2) Hypothetical UPF0144 protein BH2378                32  3.6
YCF2_OENVI (P31569) Protein ycf2 (Fragment)                            32  3.6
YCF2_OENPI (P31568) Protein ycf2 (Fragment)                            32  3.6
TRI_CHLNI (Q7M3Y3) Troponin I (TnI)                                    32  3.6
MYSA_DROME (P05661) Myosin heavy chain, muscle                         32  3.6
LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 (...    32  3.6

>MYS_AEQIR (P24733) Myosin heavy chain, striated muscle
          Length = 1938

 Score = 37.7 bits (86), Expect = 0.065
 Identities = 21/86 (24%), Positives = 39/86 (44%)

Query: 390  EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
            EE Q +  EA    +M +R C     + E +   LEQ     +  D  +A  N+R+ E  
Sbjct: 1655 EEEQRQRDEARESYNMAERRCTLMSGEVEELRAALEQAERARKASDNELADANDRVNELT 1714

Query: 450  AALDRIPGRKKKRMDLFDGPHSDFED 475
            + +  + G+K+K     +   +D ++
Sbjct: 1715 SQVSSVQGQKRKLEGDINAMQTDLDE 1740


>ERC1_HUMAN (Q8IUD2) ERC protein 1 (ELKS protein)
          Length = 1116

 Score = 35.4 bits (80), Expect = 0.32
 Identities = 16/59 (27%), Positives = 33/59 (55%)

Query: 391 EYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
           E  +R+   EREI  +K E  K   + + ++ +L++   +   KD  IA+L  ++K+++
Sbjct: 732 EMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIAELERQVKDQN 790


>CING_XENLA (Q9PTD7) Cingulin
          Length = 1360

 Score = 34.7 bits (78), Expect = 0.55
 Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 389 KEEYQERLAEAEREIHMWKR----ECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNER 444
           K+ ++E + + ERE+ + K     E   +D++ E +   LEQ+A  +++    + K+N+R
Sbjct: 809 KQRHEETVHQRERELSVLKGALKDEVSGRDRETEKLRERLEQDALMTKRSYEELVKINKR 868

Query: 445 IKEKDAALDRI 455
           ++ +   L+R+
Sbjct: 869 LESEKTDLERV 879


>HCR_HUMAN (Q8TD31) Alpha helical coiled-coil rod protein (Putative
           gene 8 protein) (Pg8)
          Length = 782

 Score = 33.9 bits (76), Expect = 0.94
 Identities = 28/102 (27%), Positives = 50/102 (48%), Gaps = 6/102 (5%)

Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
           TLPR   + + +IPL   P  ++  + RL     ++ MW+R+    D+      G    L
Sbjct: 23  TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81

Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
           E     S+Q +VI+ +L E  R++E+   L     ++K R++
Sbjct: 82  EGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLE 123


>RH25_HUMAN (P42331) Rho-GTPase-activating protein 25
          Length = 638

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 386 PQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERI 445
           P  K   +E +   +R +   ++E + + + YE  +  LE+E YD   K V + +  E+ 
Sbjct: 533 PGKKNSGEEEIDSLQRMVQELRKEIETQKQMYEEQIKNLEKENYDVWAKVVRLNEELEKE 592

Query: 446 KEKDAALD 453
           K+K AAL+
Sbjct: 593 KKKSAALE 600


>PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin)
          Length = 3336

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 19/79 (24%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIK-EK 448
           E++Q+ L  A+++  + K+E Q+K+ D++ +   L++EA    +  +++ +L E+ + EK
Sbjct: 725 EDHQKELNNAKQKTELMKQEFQRKETDWKVMKEELQREA--EEKLTLMLLELREKAESEK 782

Query: 449 DAALDRIPGRKKKRMDLFD 467
              +++   R+ +   L D
Sbjct: 783 QTIINKFELREAEMRQLQD 801


>RA50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase
          Length = 882

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 25/102 (24%), Positives = 50/102 (48%), Gaps = 16/102 (15%)

Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLE--QEAYDSRQK--------DVIIA 439
           EEY E+L E E+E+    +E     KD +  + L E   E  D + K        + +I 
Sbjct: 271 EEYLEKLKEKEKELEEQVKEITSIKKDVDAYLALKEFKNEYLDKKYKIEKELTRVEELIN 330

Query: 440 KLNERIK---EKDAALDRIPGRKKK---RMDLFDGPHSDFED 475
           ++ +RI+   EK++  +++   KK+   ++ + +  H  +E+
Sbjct: 331 EIQKRIEELNEKESEKEKLENEKKEILNKLAILEKDHQLYEE 372


>RA13_SCHPO (P28706) DNA repair protein rad13
          Length = 1112

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 26/79 (32%), Positives = 43/79 (53%), Gaps = 9/79 (11%)

Query: 373 LSSTV-PEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDS 431
           LSS V PE+   LL + +EE   R+AE E+E   +  E  ++ +  E       QEA++ 
Sbjct: 679 LSSKVEPEVVEKLLDEEEEEMIIRMAEEEKEYDRFVSELNQRHETEE-----WNQEAFEK 733

Query: 432 RQKDVIIAKLNERIKEKDA 450
           R K++   K  +R +++DA
Sbjct: 734 RLKEL---KNQKRSEKRDA 749


>HCR_PIG (Q9TSV3) Alpha helical coiled-coil rod protein (Fragment)
          Length = 427

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAER-EIHMWKRECQKKDKD---YETVMGL 423
           TLPR     V +IPL + P   ++  ERL++ +R ++ MW++E   K ++       + L
Sbjct: 19  TLPRMAPPWVSDIPL-VQPPAHQDVLERLSDNQRPQVTMWEKEVSGKGQEPGWRGRSVEL 77

Query: 424 LEQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
              +A  S+Q ++I  +L E  R++E+   L     ++K R++
Sbjct: 78  AGSQAL-SQQAELISRQLQELRRLEEEVRVLRETSLQQKMRLE 119


>STN3_HUMAN (Q9NZ72) Stathmin 3 (SCG10-like protein)
          Length = 180

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 29/117 (24%), Positives = 52/117 (43%), Gaps = 25/117 (21%)

Query: 374 SSTVPEIPLPLLPQTK-----EEYQERLAEAE-----REIHMWKRECQKKDKDYETVMGL 423
           S   PE P+   P  K     EE Q+RL  AE     +E  + K+  ++++ + E +   
Sbjct: 62  SDLSPESPMLSSPPKKKDTSLEELQKRLEAAEERRKTQEAQVLKQLAERREHEREVLHKA 121

Query: 424 LEQEAYDSRQ---------------KDVIIAKLNERIKEKDAALDRIPGRKKKRMDL 465
           LE+    SRQ               ++  +A L ER++EK+     +   K++R ++
Sbjct: 122 LEENNNFSRQAEEKLNYKMELSKEIREAHLAALRERLREKELHAAEVRRNKEQREEM 178


>MAPA_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)
            (Proliferation-related protein p80) [Contains: MAP1 light
            chain LC2]
          Length = 2805

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 21/73 (28%), Positives = 37/73 (49%), Gaps = 3/73 (4%)

Query: 398  EAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKDAAL---DR 454
            + +  +H+     +++DK  E     LEQ+     QKD  +   ++ ++EKD AL   D+
Sbjct: 1389 QKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDK 1448

Query: 455  IPGRKKKRMDLFD 467
            IP  K K ++  D
Sbjct: 1449 IPEEKDKALEQKD 1461



 Score = 31.2 bits (69), Expect = 6.1
 Identities = 20/78 (25%), Positives = 39/78 (49%), Gaps = 3/78 (3%)

Query: 390  EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
            E+  + L   ++++    +  ++KDK  E     LEQ+     QKD  +   ++ +++KD
Sbjct: 1423 EQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKD 1482

Query: 450  AAL---DRIPGRKKKRMD 464
              L   ++IP  K K +D
Sbjct: 1483 RVLEQKEKIPEEKDKALD 1500


>HCR_PONPY (Q8HZ58) Alpha helical coiled-coil rod protein
          Length = 782

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 28/102 (27%), Positives = 49/102 (47%), Gaps = 6/102 (5%)

Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
           TLPR   + + +IPL   P  ++  + RL     ++ MW+R+    D+      G    L
Sbjct: 23  TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81

Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
           E     S+Q +VI  +L E  R++E+   L     ++K R++
Sbjct: 82  EGSQALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLE 123


>HCR_PANTR (Q8HZ60) Alpha helical coiled-coil rod protein
          Length = 782

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 28/102 (27%), Positives = 49/102 (47%), Gaps = 6/102 (5%)

Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
           TLPR   + + +IPL   P  ++  + RL     ++ MW+R+    D+      G    L
Sbjct: 23  TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81

Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
           E     S+Q +VI  +L E  R++E+   L     ++K R++
Sbjct: 82  EGSQALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLE 123


>HCR_PANPA (Q8HZ57) Alpha helical coiled-coil rod protein
          Length = 782

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 28/102 (27%), Positives = 49/102 (47%), Gaps = 6/102 (5%)

Query: 368 TLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGL---L 424
           TLPR   + + +IPL   P  ++  + RL     ++ MW+R+    D+      G    L
Sbjct: 23  TLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDV-SSDRQEPGRRGRSWGL 81

Query: 425 EQEAYDSRQKDVIIAKLNE--RIKEKDAALDRIPGRKKKRMD 464
           E     S+Q +VI  +L E  R++E+   L     ++K R++
Sbjct: 82  EGSQALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLE 123


>YN78_BACHD (Q9KAB2) Hypothetical UPF0144 protein BH2378
          Length = 521

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 387 QTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLE---------QEAYDSRQKDVI 437
           + K+E  +   EAEREI   + E QK++        +L+         +E+ D R++   
Sbjct: 62  EVKDEVHKLRTEAEREIRERRNEIQKQENRLVQKEEILDRKSETLDKKEESLDKREES-- 119

Query: 438 IAKLNERIKEKDAALDRIPGRKKKRMDLFDG 468
           + K   +I+E D+ ++ I  +++  ++   G
Sbjct: 120 LTKKQRQIEEMDSKVEEILNKQQVELERISG 150


>YCF2_OENVI (P31569) Protein ycf2 (Fragment)
          Length = 630

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 23/93 (24%), Positives = 44/93 (46%), Gaps = 9/93 (9%)

Query: 372 FLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDS 431
           FL     EIP   +P+ ++E  E   E   E+ +W  E + +  D E V+        ++
Sbjct: 393 FLLDCEAEIPAEEIPEEEDELPEDALET--EVAVWGVEEEGEADDEEDVL-------LEA 443

Query: 432 RQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD 464
           +Q+D ++ + +E + E++  LD      K+  D
Sbjct: 444 QQEDELLEEEDEELDEEEDELDEEEEEPKEEED 476


>YCF2_OENPI (P31568) Protein ycf2 (Fragment)
          Length = 721

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 23/93 (24%), Positives = 44/93 (46%), Gaps = 9/93 (9%)

Query: 372 FLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDS 431
           FL     EIP   +P+ ++E  E   E   E+ +W  E + +  D E V+        ++
Sbjct: 482 FLLDCEAEIPAEEIPEEEDELPEDALET--EVAVWGVEEEGEADDEEDVL-------LEA 532

Query: 432 RQKDVIIAKLNERIKEKDAALDRIPGRKKKRMD 464
           +Q+D ++ + +E + E++  LD      K+  D
Sbjct: 533 QQEDELLEEEDEELDEEEDELDEEEEEPKEEED 565


>TRI_CHLNI (Q7M3Y3) Troponin I (TnI)
          Length = 292

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
           +++ +RLA  E +++ W+ + +K+D +    +  L  +  D++ K   +  +  ++ + +
Sbjct: 201 KDFHKRLASLEEDVYDWEAKIRKQDFE----INELTLKVNDTKGK--FVKPVLRKVNKTE 254

Query: 450 AALDRIPGRKKKRMDLFDGPHSDFE 474
           + LD+I  ++ K+ D  D   S  E
Sbjct: 255 SKLDKIQRKEAKKSDFRDNLKSSRE 279


>MYSA_DROME (P05661) Myosin heavy chain, muscle
          Length = 1962

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 393  QERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKDAAL 452
            QE +A+ ER     ++  Q+KDK+  ++   LE E        V++ K   +IKE  A +
Sbjct: 1062 QEAVADLERNKKELEQTIQRKDKELSSITAKLEDE-------QVVVLKHQRQIKELQARI 1114

Query: 453  DRI 455
            + +
Sbjct: 1115 EEL 1117



 Score = 32.0 bits (71), Expect = 3.6
 Identities = 22/86 (25%), Positives = 36/86 (41%)

Query: 390  EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
            EE Q    +A  ++ + +R       + E    LLEQ     RQ +  +A  +E++ E  
Sbjct: 1657 EEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVS 1716

Query: 450  AALDRIPGRKKKRMDLFDGPHSDFED 475
            A    I   K+K        HSD ++
Sbjct: 1717 AQNASISAAKRKLESELQTLHSDLDE 1742


>LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2
           (Protein LAPSER1)
          Length = 669

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 18/68 (26%), Positives = 34/68 (49%)

Query: 385 LPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNER 444
           L Q K + Q+  A+  +E    +R C   +++   +   LE+  ++  QK   I+ L ++
Sbjct: 397 LQQEKRQLQDDFAQLLQEREQLERRCATLEREQRELGPRLEETKWEVCQKSGEISLLKQQ 456

Query: 445 IKEKDAAL 452
           +KE  A L
Sbjct: 457 LKESQAEL 464


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.321    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,786,816
Number of Sequences: 164201
Number of extensions: 2711308
Number of successful extensions: 7345
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 7274
Number of HSP's gapped (non-prelim): 103
length of query: 475
length of database: 59,974,054
effective HSP length: 114
effective length of query: 361
effective length of database: 41,255,140
effective search space: 14893105540
effective search space used: 14893105540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)


Medicago: description of AC149496.4