Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149491.7 - phase: 0 
         (114 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RPB9_PIG (P60899) DNA-directed RNA polymerase II 14.5 kDa polype...   156  7e-39
RPB9_MOUSE (P60898) DNA-directed RNA polymerase II 14.5 kDa poly...   156  7e-39
RPB9_HUMAN (P36954) DNA-directed RNA polymerase II 14.5 kDa poly...   156  7e-39
RPB9_DROME (P36958) DNA-directed RNA polymerase II 15.1 kDa poly...   147  6e-36
RPB9_YEAST (P27999) DNA-directed RNA polymerase II subunit 9 (EC...   106  1e-23
RPB9_SCHPO (O74635) DNA-directed RNA polymerase II subunit 9 (EC...   105  2e-23
RPB9_ASHGO (Q755B3) DNA-directed RNA polymerase II subunit 9 (EC...   105  2e-23
RPB9_CANGA (Q6FS48) DNA-directed RNA polymerase II subunit 9 (EC...   104  3e-23
RPB9_ENCCU (Q8SQU1) DNA-directed RNA polymerase II subunit 9 (EC...    80  6e-16
RPOM_THECE (Q56254) DNA-directed RNA polymerase subunit M (EC 2....    64  6e-11
RPCZ_HUMAN (Q9Y2Y1) DNA-directed RNA polymerases III 12.5 kDa po...    61  5e-10
RPCZ_MOUSE (Q9CQZ7) DNA-directed RNA polymerases III 12.5 kDa po...    60  7e-10
RPOM_METJA (Q58548) DNA-directed RNA polymerase subunit M (EC 2....    56  1e-08
RPOM_SULAC (Q07271) DNA-directed RNA polymerase subunit M (EC 2....    54  8e-08
RPOM_METTH (O27369) DNA-directed RNA polymerase subunit M (EC 2....    49  3e-06
RPCZ_YEAST (Q04307) DNA-directed RNA polymerases III 12.5 kDa po...    47  6e-06
RPOB_THEAC (Q03587) DNA-directed RNA polymerase subunit B (EC 2....    33  0.12
TFS2_DROME (P20232) Transcription elongation factor S-II (RNA po...    32  0.26
TCE3_MOUSE (P23881) Transcription elongation factor A protein 3 ...    32  0.26
RPA9_SCHPO (O94703) DNA-directed RNA polymerase I 13.1 kDa polyp...    30  1.3

>RPB9_PIG (P60899) DNA-directed RNA polymerase II 14.5 kDa
           polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5)
          Length = 125

 Score =  156 bits (395), Expect = 7e-39
 Identities = 67/112 (59%), Positives = 89/112 (78%), Gaps = 1/112 (0%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVA 63
           ++FC+ECNN+LYPKED+E +ILLYACRNCD+Q+ ADN C+Y N+I H V E TQ++ DV+
Sbjct: 14  IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73

Query: 64  ADPTLPRTKAVRCVQCNHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRD 114
            DPTLPRT+   C +C H EAVFFQ+ +AR E+ M L++VC  P+CGHRW +
Sbjct: 74  QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125


>RPB9_MOUSE (P60898) DNA-directed RNA polymerase II 14.5 kDa
           polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5)
          Length = 125

 Score =  156 bits (395), Expect = 7e-39
 Identities = 67/112 (59%), Positives = 89/112 (78%), Gaps = 1/112 (0%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVA 63
           ++FC+ECNN+LYPKED+E +ILLYACRNCD+Q+ ADN C+Y N+I H V E TQ++ DV+
Sbjct: 14  IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73

Query: 64  ADPTLPRTKAVRCVQCNHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRD 114
            DPTLPRT+   C +C H EAVFFQ+ +AR E+ M L++VC  P+CGHRW +
Sbjct: 74  QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125


>RPB9_HUMAN (P36954) DNA-directed RNA polymerase II 14.5 kDa
           polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5)
          Length = 125

 Score =  156 bits (395), Expect = 7e-39
 Identities = 67/112 (59%), Positives = 89/112 (78%), Gaps = 1/112 (0%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVA 63
           ++FC+ECNN+LYPKED+E +ILLYACRNCD+Q+ ADN C+Y N+I H V E TQ++ DV+
Sbjct: 14  IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73

Query: 64  ADPTLPRTKAVRCVQCNHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRD 114
            DPTLPRT+   C +C H EAVFFQ+ +AR E+ M L++VC  P+CGHRW +
Sbjct: 74  QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125


>RPB9_DROME (P36958) DNA-directed RNA polymerase II 15.1 kDa
           polypeptide (EC 2.7.7.6)
          Length = 129

 Score =  147 bits (370), Expect = 6e-36
 Identities = 63/112 (56%), Positives = 86/112 (76%), Gaps = 1/112 (0%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVA 63
           ++FC+ECNN+LYPKED+E KILLYACRNCD+++  ++ C+Y N+I H + E T ++ DV 
Sbjct: 18  IRFCQECNNMLYPKEDKENKILLYACRNCDYKQKTNSNCIYVNKIMHEIDELTHIVPDVI 77

Query: 64  ADPTLPRTKAVRCVQCNHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRD 114
           +DPTLPRT+   C +C+H EAVFF+A T R EE M L++VC N NC HRW +
Sbjct: 78  SDPTLPRTEDHACPKCSHREAVFFKAQTRRAEEEMRLYYVCTNQNCTHRWTE 129


>RPB9_YEAST (P27999) DNA-directed RNA polymerase II subunit 9 (EC
           2.7.7.6) (DNA-directed RNA polymerase II 14.2 kDa
           polypeptide) (B12.6)
          Length = 122

 Score =  106 bits (264), Expect = 1e-23
 Identities = 51/111 (45%), Positives = 74/111 (65%), Gaps = 4/111 (3%)

Query: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60
           M+T +FCR+CNN+LYP+ED+E   LL+ CR C + E A +  VYR+E+  ++ E   V+Q
Sbjct: 1   MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60

Query: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEE-GMTLFFVCCNPNCGH 110
           D+ +DPTLPR+    C +C+  E VFFQ+  R ++  M LFFVC   +C H
Sbjct: 61  DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVCL--SCSH 108


>RPB9_SCHPO (O74635) DNA-directed RNA polymerase II subunit 9 (EC
           2.7.7.6) (DNA-directed RNA polymerase II 13.2 kDa
           polypeptide)
          Length = 113

 Score =  105 bits (261), Expect = 2e-23
 Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 4/115 (3%)

Query: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60
           MS  ++C ECNN+LYP+ED+  ++L  ACRNCD+ E A    VYR+E+  S  E T V  
Sbjct: 1   MSNFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSH 60

Query: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRD 114
           D + DPTLPR+    C +C+  EAVF+Q  + RG+  MTL +VC   +CG  + +
Sbjct: 61  DASTDPTLPRSDK-ECPRCHQHEAVFYQTHSRRGDTMMTLIYVCV--HCGFAFEE 112


>RPB9_ASHGO (Q755B3) DNA-directed RNA polymerase II subunit 9 (EC
           2.7.7.6)
          Length = 122

 Score =  105 bits (261), Expect = 2e-23
 Identities = 50/111 (45%), Positives = 73/111 (65%), Gaps = 4/111 (3%)

Query: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60
           M+T +FCR+CNN+LYP+ED+E++ LL+ CR C + E A    VYR+E+  ++ E   V+Q
Sbjct: 1   MTTFRFCRDCNNMLYPREDKEEQRLLFECRTCTYAEEAGTPLVYRHELITNIGETAGVVQ 60

Query: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEE-GMTLFFVCCNPNCGH 110
           D+ +DPTLPR+    C +C+  + VFFQ+  R  +  M LFFVC    C H
Sbjct: 61  DIGSDPTLPRSDR-ECPRCHSHDNVFFQSQQRRRDTSMVLFFVCL--GCSH 108


>RPB9_CANGA (Q6FS48) DNA-directed RNA polymerase II subunit 9 (EC
           2.7.7.6)
          Length = 122

 Score =  104 bits (260), Expect = 3e-23
 Identities = 51/111 (45%), Positives = 73/111 (64%), Gaps = 4/111 (3%)

Query: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60
           M+T +FCR+CNN+LYP+ED+E   LL+ CR C + E A +  VYR+E+  ++ E   V+Q
Sbjct: 1   MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYIEEAGSPLVYRHELITNIGETAGVVQ 60

Query: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEE-GMTLFFVCCNPNCGH 110
           D+ +DPTLPR+    C +C+  E VFFQ+  R ++  M LFFVC    C H
Sbjct: 61  DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVCL--ACSH 108


>RPB9_ENCCU (Q8SQU1) DNA-directed RNA polymerase II subunit 9 (EC
           2.7.7.6)
          Length = 108

 Score = 80.5 bits (197), Expect = 6e-16
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 5   KFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVAA 64
           +FC+ECNN+LYPKED     L  AC+NC+H + A +  +Y        A      +D+  
Sbjct: 4   RFCKECNNLLYPKED--DNTLFLACKNCEHIQEAKSHRLYVKNFRPKHASIELYARDLVQ 61

Query: 65  DPTLPRTKAVRCVQCNHGEAVFFQATARGEE--GMTLFFVCCNPNCGHRW 112
           DPTLP  K + C  C   + ++FQ    GEE   +++F++CC   C H W
Sbjct: 62  DPTLPSVK-INCGNCGFNKGLYFQPRG-GEEDVALSIFYLCC--RCYHLW 107


>RPOM_THECE (Q56254) DNA-directed RNA polymerase subunit M (EC
           2.7.7.6)
          Length = 110

 Score = 63.9 bits (154), Expect = 6e-11
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 17/117 (14%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAAD-----NFCVYRNEIHHSVAERTQV 58
           MKFC +C N++ P  DR++K+  + CR+C ++E  D        V + E+ H   E   V
Sbjct: 1   MKFCPKCGNLMLP--DRKRKV--WVCRSCGYEEPFDEEKDREKTVIKQEVKHKPDEGIVV 56

Query: 59  L-QDVAADPTLPRTKAVRCVQCNHGEAVFFQATAR-GEEGMTLFFVCCNPNCGHRWR 113
           + QD+    TLP TK + C +C +  A +++   R G+E  T+F+ C    CGH WR
Sbjct: 57  IEQDL---KTLPTTK-ITCPKCGNDTAYWWEMQTRAGDEPSTIFYKC--TKCGHTWR 107


>RPCZ_HUMAN (Q9Y2Y1) DNA-directed RNA polymerases III 12.5 kDa
           polypeptide (EC 2.7.7.6) (RNA polymerase III C11
           subunit) (HsC11p) (hRPC11) (My010 protein)
          Length = 108

 Score = 60.8 bits (146), Expect = 5e-10
 Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 6   FCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVAAD 65
           FC  C N L  +E   Q+   +AC  C +          R   +  + E   VL   AA 
Sbjct: 4   FCPGCGNGLIVEEG--QRCHRFACNTCPYVHNITRKVTNRK--YPKLKEVDDVLGGAAAW 59

Query: 66  PTLPRTKAVRCVQCNHGEAVFFQATARG-EEGMTLFFVCCNPNCGHRWRD 114
             +  T A  C +C H  A F Q   R  +E MT F+ CCN  CGHRWRD
Sbjct: 60  ENVDST-AESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108


>RPCZ_MOUSE (Q9CQZ7) DNA-directed RNA polymerases III 12.5 kDa
           polypeptide (EC 2.7.7.6) (RNA polymerase III C11
           subunit)
          Length = 108

 Score = 60.5 bits (145), Expect = 7e-10
 Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 6   FCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVAAD 65
           FC  C N L  +E   Q+   +AC  C +          R   +  + E   VL   AA 
Sbjct: 4   FCPGCGNGLIVEEG--QRCHRFACNTCPYVHNITRKVTNRK--YPKLKEVDDVLGGAAAW 59

Query: 66  PTLPRTKAVRCVQCNHGEAVFFQATARG-EEGMTLFFVCCNPNCGHRWRD 114
             +  T A  C +C H  A F Q   R  +E MT F+ CCN  CGHRWRD
Sbjct: 60  ENVDST-AEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108


>RPOM_METJA (Q58548) DNA-directed RNA polymerase subunit M (EC
           2.7.7.6)
          Length = 108

 Score = 56.2 bits (134), Expect = 1e-08
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 14/115 (12%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQE--AADNFCVYRNEIH-HSVAERTQVLQ 60
           +KFC +CNN++ PK+ +        C  C ++E   A+    Y  + H  +  E+  V++
Sbjct: 2   VKFCPKCNNLMLPKDGK------LKCAVCGYEEETTAEGSKEYEYKEHLENKKEKITVIE 55

Query: 61  DVAADPTLPRTKAVRCVQCNHGEAVFF-QATARGEEGMTLFFVCCNPNCGHRWRD 114
               + TLP T+ + C +C H EA ++ Q T   +E  T F+ C    CGH WR+
Sbjct: 56  SEGLE-TLPTTR-IECPKCGHNEAYWWLQQTRCADEPETRFYKC--KKCGHTWRE 106


>RPOM_SULAC (Q07271) DNA-directed RNA polymerase subunit M (EC
           2.7.7.6)
          Length = 202

 Score = 53.5 bits (127), Expect = 8e-08
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNF-CVYRNEIHHSVAERTQVLQDV 62
           MKFC +C +++ P+++  + +  Y C  C + +  +         I HS   +T VL   
Sbjct: 92  MKFCPKCGSMMMPRKENGKTV--YKCSKCAYIDTENQKEAKITTVIKHSAKAKTLVLASD 149

Query: 63  AADPTLPRTKAVRCVQCNHGEAVFF-QATARGEEGMTLFFVCCNPNCGHRWRD 114
             +P +  T+ + C  C + EA F+   T   +E  T F+ C    CG  WR+
Sbjct: 150 MPNPGVQLTRGISCPSCGNDEAYFWILQTRSADEPATRFYKC--TKCGKVWRE 200


>RPOM_METTH (O27369) DNA-directed RNA polymerase subunit M (EC
           2.7.7.6)
          Length = 136

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 31/122 (25%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVA 63
           M+FC +C  +++P E +      + C+           C Y  +I   + ++ +V ++V 
Sbjct: 33  MEFCPKCGAVMFPSEGK------FKCQ-----------CGYEKDITDKLKDKYRVSEEVE 75

Query: 64  ADP----------TLPRTKAVRCVQCNHGEAVFF-QATARGEEGMTLFFVCCNPNCGHRW 112
           A            TLP T+ V C +C + EA ++ Q T R +E  T FF C    C H W
Sbjct: 76  AKETIIFTGDDVNTLPTTR-VECPKCGNMEAFWWLQQTRRADESETRFFRC--TRCKHTW 132

Query: 113 RD 114
           R+
Sbjct: 133 RE 134


>RPCZ_YEAST (Q04307) DNA-directed RNA polymerases III 12.5 kDa
           polypeptide (EC 2.7.7.6)
          Length = 110

 Score = 47.4 bits (111), Expect = 6e-06
 Identities = 33/113 (29%), Positives = 51/113 (44%), Gaps = 7/113 (6%)

Query: 4   MKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVY-RNEIHHSVAERTQVLQDV 62
           + FC  CNN+L      +  +   ACR+C ++   +   +Y R ++     E   VL   
Sbjct: 2   LSFCPSCNNMLLITSG-DSGVYTLACRSCPYEFPIEGIEIYDRKKLPRK--EVDDVLGGG 58

Query: 63  AADPTLPRTKAVRCVQCNHGEAVFFQATARG-EEGMTLFFVCCNPNCGHRWRD 114
             +    +T+      C    A FFQ   R  +E MT F+ C N  CGHRW++
Sbjct: 59  WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKE 109


>RPOB_THEAC (Q03587) DNA-directed RNA polymerase subunit B (EC
            2.7.7.6)
          Length = 1195

 Score = 33.1 bits (74), Expect = 0.12
 Identities = 21/81 (25%), Positives = 35/81 (42%), Gaps = 13/81 (16%)

Query: 43   VYRNEIHHSVAERTQV-----LQDVAADPTLPRTKA--------VRCVQCNHGEAVFFQA 89
            +Y  ++HH VA +        +Q +   PT  R++          R     HG A+  + 
Sbjct: 1062 IYYQKLHHMVAGKFHARSRGPVQILTRQPTEGRSRQGGLRFGEMERDTLIAHGAAMVIKD 1121

Query: 90   TARGEEGMTLFFVCCNPNCGH 110
                +   T+ +VC NP+CGH
Sbjct: 1122 RLLDQSDGTVLYVCGNPSCGH 1142


>TFS2_DROME (P20232) Transcription elongation factor S-II (RNA
           polymerase II elongation factor DMS-II) (TFIIS)
          Length = 313

 Score = 32.0 bits (71), Expect = 0.26
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 70  RTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWR 113
           +T  ++C +C      + Q   R  +     FV CN  CG+RW+
Sbjct: 269 KTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCN-ECGNRWK 311


>TCE3_MOUSE (P23881) Transcription elongation factor A protein 3
           (Transcription elongation factor S-II protein 3)
           (Transcription elongation factor TFIIS.h)
          Length = 347

 Score = 32.0 bits (71), Expect = 0.26
 Identities = 14/43 (32%), Positives = 20/43 (45%), Gaps = 1/43 (2%)

Query: 71  TKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWR 113
           T  +RC +C      + Q   R  +     FV CN  CG+RW+
Sbjct: 304 TDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCN-ECGNRWK 345


>RPA9_SCHPO (O94703) DNA-directed RNA polymerase I 13.1 kDa
           polypeptide (EC 2.7.7.6)
          Length = 119

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60
           + ++ FC EC N+L              C  C     ++ F     E   S +     L+
Sbjct: 4   IGSLIFCSECGNLL-----ESTTAQWTTCDQCQSVYPSEQFANLVVETKSSASAFPSALK 58

Query: 61  ------DVAADPTLPRTKAVRCVQCNHGEAVFFQATAR-GEEGMTLFFVCCNPNCGHRW 112
                  V +      T   +C +C +    F     R  +EG T+F+ C  P C +++
Sbjct: 59  LKHSIVQVESQKEEAATIEEKCPKCGNDHMTFHTLQLRSADEGSTVFYEC--PRCAYKF 115


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.326    0.137    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,849,238
Number of Sequences: 164201
Number of extensions: 418601
Number of successful extensions: 1244
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1206
Number of HSP's gapped (non-prelim): 27
length of query: 114
length of database: 59,974,054
effective HSP length: 90
effective length of query: 24
effective length of database: 45,195,964
effective search space: 1084703136
effective search space used: 1084703136
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)


Medicago: description of AC149491.7