BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149489.3 + phase: 0 
         (620 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13...    40  0.018
YO91_CAEEL (P41842) Hypothetical protein T20B12.1 in chromosome III    36  0.34
YQGP_BACSU (P54493) Hypothetical protein yqgP                          32  6.5
SWRC_BACSU (O31501) Swarming motility protein swrC                     32  6.5
YNL6_YEAST (P53924) Hypothetical 57.6 kDa protein in MLS1-RPC19 ...    31  8.4

>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
           (Leucine-rich PPR-motif containing protein)
          Length = 1273

 Score = 40.0 bits (92), Expect = 0.018
 Identities = 29/138 (21%), Positives = 68/138 (49%), Gaps = 7/138 (5%)

Query: 315 VVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAA-CSRGRLLDEGRALY 372
           V  +NA++  Y  +       D   KM + + +P+ +T+  ++A+ C+ G +    + L 
Sbjct: 41  VSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILG 100

Query: 373 NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLI---RNMSVKPDSGVWGALLNSCKI 429
            +  +D  +T  V  ++ ++      G ++ A +++   R+  ++P    + ALLN+   
Sbjct: 101 FMKTKDLPVTEAV--FSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAE 158

Query: 430 HGNVELAELALEKLIELE 447
            G+++  +  LEK+ + E
Sbjct: 159 KGDIDHVKQTLEKVEKFE 176



 Score = 37.7 bits (86), Expect = 0.090
 Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 8/136 (5%)

Query: 202 AGRVFDKI----VVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVIS 257
           A R++D +     V D   +N++L  Y QN +         +M    ++P   T   +I+
Sbjct: 25  AHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIA 84

Query: 258 SSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVV- 316
           S  +V  +    +I GF         + V +AL+  +A+ G ++ A  +   +R+  +  
Sbjct: 85  SYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEP 144

Query: 317 ---SWNAIITGYAMHG 329
              ++ A++  YA  G
Sbjct: 145 GPDTYLALLNAYAEKG 160



 Score = 35.8 bits (81), Expect = 0.34
 Identities = 30/94 (31%), Positives = 47/94 (49%), Gaps = 7/94 (7%)

Query: 417 SGVWGALLNSCKIHGNVELAELALEKLIELEPD---DSGNYVILANMYAQSGKWEGVEKL 473
           +G + AL+N C  H  VE A    E+   L+     D+GNY+ L  + A+ GK +   K+
Sbjct: 590 TGGYAALINLCCRHDKVEDALNLKEEFDRLDSSAVLDTGNYLGLVRVLAKHGKLQDAIKI 649

Query: 474 RQVMIDK--RIKKNIACSWIEVKNKVYAFLAGDV 505
            + M +K   IK   A S+  + N   A L G++
Sbjct: 650 LKEMKEKDVLIKDTTALSFFHMLNG--AALRGEI 681


>YO91_CAEEL (P41842) Hypothetical protein T20B12.1 in chromosome III
          Length = 787

 Score = 35.8 bits (81), Expect = 0.34
 Identities = 24/97 (24%), Positives = 46/97 (46%), Gaps = 6/97 (6%)

Query: 364 LLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGAL 423
           +L + R L    +   G+TP  Q    +  +L   G   EA  ++  + +      W  +
Sbjct: 358 VLIKDRLLRTSYILASGLTPFWQSSVLLAGILNSLGCTSEALLILEKLEM------WDGV 411

Query: 424 LNSCKIHGNVELAELALEKLIELEPDDSGNYVILANM 460
           ++  K  G ++ AE  + +LIE +P+DS  +V L ++
Sbjct: 412 IDCYKQLGQMDKAETLIRRLIEQKPNDSMLHVYLGDI 448


>YQGP_BACSU (P54493) Hypothetical protein yqgP
          Length = 507

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 24/91 (26%), Positives = 41/91 (44%), Gaps = 12/91 (13%)

Query: 394 LLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGN 453
           L G   Q D + DL++ ++V  D  +           G  + A   LE+ ++ EP D  +
Sbjct: 413 LNGEAAQKDASADLLKILAVS-DIQI-----------GEYDQAVSLLERAVKKEPKDHAS 460

Query: 454 YVILANMYAQSGKWEGVEKLRQVMIDKRIKK 484
           Y  LA +YA+  +    EK  Q  +  + K+
Sbjct: 461 YYNLALLYAEKNELAQAEKAIQTAVKLKPKE 491


>SWRC_BACSU (O31501) Swarming motility protein swrC
          Length = 1052

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 17/48 (35%), Positives = 28/48 (57%), Gaps = 1/48 (2%)

Query: 496 KVYAFLAGDVSHSNSDAIYAEL-KRLEGLMHEAGYAPDTGSVFHDVEE 542
           KVYA + G+V+  N  A+ A + K+++ L H    + DTG V  D+ +
Sbjct: 831 KVYADVTGEVTSDNVTAVSAAIQKKIDKLDHPDNVSIDTGGVSADIAD 878


>YNL6_YEAST (P53924) Hypothetical 57.6 kDa protein in MLS1-RPC19
           intergenic region
          Length = 522

 Score = 31.2 bits (69), Expect = 8.4
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)

Query: 34  TASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYA 93
           T S+ S  P  TT     +++     S  +N  ++++    HL  A NQ   T+++HL  
Sbjct: 178 TTSIISMAPAATTR----NIVGGADGSTIVNNSQEMYKNLRHLIYAANQPNGTEILHLDL 233

Query: 94  VSNSLLNARNLFD 106
            + S   + N+F+
Sbjct: 234 PATSAEESNNMFN 246


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.323    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,499,690
Number of Sequences: 164201
Number of extensions: 3120111
Number of successful extensions: 6621
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6614
Number of HSP's gapped (non-prelim): 10
length of query: 620
length of database: 59,974,054
effective HSP length: 116
effective length of query: 504
effective length of database: 40,926,738
effective search space: 20627075952
effective search space used: 20627075952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)