BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149307.10 + phase: 0 /pseudo
(114 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K2L4_HUMAN (Q99706) Killer cell immunoglobulin-like receptor 2DL... 32 0.34
PPN1_BACSU (O31612) Probable inorganic polyphosphate/ATP-NAD kin... 28 2.9
YP92_CAEEL (Q09243) Hypothetical protein C28H8.2 in chromosome I... 28 4.9
YL52_CLOPE (Q8XIG8) Hypothetical UPF0246 protein CPE2152 28 4.9
TRM1_SULSO (Q97ZH0) N(2),N(2)-dimethylguanosine tRNA methyltrans... 27 6.4
POLG_TMEVD (P13899) Genome polyprotein [Contains: Coat protein V... 27 8.4
NTP1_MSEPV (Q9YW39) Nucleoside triphosphatase I (EC 3.6.1.15) (N... 27 8.4
FAS2_YEAST (P19097) Fatty acid synthase subunit alpha (EC 2.3.1.... 27 8.4
>K2L4_HUMAN (Q99706) Killer cell immunoglobulin-like receptor 2DL4
precursor (MHC class I NK cell receptor KIR103AS)
(Killer cell inhibitory receptor 103AS) (KIR-103AS)
(G9P)
Length = 377
Score = 31.6 bits (70), Expect = 0.34
Identities = 20/73 (27%), Positives = 36/73 (48%), Gaps = 10/73 (13%)
Query: 23 IDDSFLVDFPI-------CGRLFTWYRGDGYSMSKLDRFL---LSDNCYSTWPNCIQIAL 72
I+ +F DFP+ R F + G Y S L ++ N S+WP+ + +
Sbjct: 174 INGTFQADFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSF 233
Query: 73 QSGLSDHVHMVLR 85
++G++ H+H V+R
Sbjct: 234 KTGIARHLHAVIR 246
>PPN1_BACSU (O31612) Probable inorganic polyphosphate/ATP-NAD kinase
1 (EC 2.7.1.23) (Poly(P)/ATP NAD kinase 1)
Length = 266
Score = 28.5 bits (62), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (61%)
Query: 21 KFIDDSFLVDFPICGRLFTWYRGDGYSMS 49
K I+ S + D I G+LF +RGDG +S
Sbjct: 127 KSIEGSLVADVEIKGQLFETFRGDGLCLS 155
>YP92_CAEEL (Q09243) Hypothetical protein C28H8.2 in chromosome III
precursor
Length = 162
Score = 27.7 bits (60), Expect = 4.9
Identities = 14/27 (51%), Positives = 18/27 (65%), Gaps = 3/27 (11%)
Query: 75 GLSDHVHMVLR-VDEEN--WGPRPLRM 98
G DH HM++R V++EN WG R L M
Sbjct: 132 GFEDHFHMIIRAVNDENVGWGVRYLSM 158
>YL52_CLOPE (Q8XIG8) Hypothetical UPF0246 protein CPE2152
Length = 254
Score = 27.7 bits (60), Expect = 4.9
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 7 RGSSFRQHDADIFNK----FIDDSFLVDFPICGRLFTWYRGDGYSMSKLDRFLL--SDNC 60
+G ++R DAD F K F +DS + + G L Y + + + S N
Sbjct: 83 KGEAYRGLDADDFTKEDLEFCNDSLRILSGLYGALKPLDGTKAYRLEMGTKISIDGSKNL 142
Query: 61 YSTWPNCIQIALQSGLSDHVHMVL 84
Y W N I A+ L +H V+
Sbjct: 143 YDFWGNKIMEAVLKDLENHKEKVI 166
>TRM1_SULSO (Q97ZH0) N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2-dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase)
Length = 378
Score = 27.3 bits (59), Expect = 6.4
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 19 FNKFIDDSFLVDFPICGRLFT----WYRGDGYSMSKLDRF--LLSDNCYSTWPNCIQ 69
F F++++ P+CG +F+ Y G YSM L R L S+ Y T N IQ
Sbjct: 251 FQTFVEENCKTKCPVCGEIFSIIGPLYIGPLYSMEFLKRIMDLYSNFNYLTSFNRIQ 307
>POLG_TMEVD (P13899) Genome polyprotein [Contains: Coat protein VP4
(P1A); Coat protein VP2 (P1B); Coat protein VP3 (P1C);
Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29)
(Core protein P2A); Core protein P2B; Core protein P2C;
Core protein P3A; Genome
Length = 2301
Score = 26.9 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 17 DIFNKFIDDSFLVDFPICGRLFTWYRGDGYSMSKLDRFLL 56
D+F FID+ D+ + GR +R G+ ++ R L+
Sbjct: 929 DLFITFIDEFITFDYKVHGRPVLTFRIPGFGLTPAGRMLV 968
>NTP1_MSEPV (Q9YW39) Nucleoside triphosphatase I (EC 3.6.1.15)
(Nucleoside triphosphate phosphohydrolase I) (NPH I)
Length = 647
Score = 26.9 bits (58), Expect = 8.4
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 3 ERKSRGSSFRQHDADIFNKFIDDSFLVDFPICGRLFTWYRGDGYSMSKLDRFLLSD 58
E S+ S R ++ DIFNK+ D+ + +C +F+ +G S S ++ ++ D
Sbjct: 419 EYSSKTESTRDYNIDIFNKY-DNLYGNKIKVC--IFSAAGSEGISFSSINDIIILD 471
>FAS2_YEAST (P19097) Fatty acid synthase subunit alpha (EC 2.3.1.86)
[Includes: Acyl carrier;
3-oxoacyl-[acyl-carrier-protein] reductase (EC
1.1.1.100) (Beta-ketoacyl reductase);
3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
(Beta-ketoacyl synth
Length = 1887
Score = 26.9 bits (58), Expect = 8.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 18 IFNKFIDDSFLVDFPICGRLFTWYRGDG 45
+FN++ +S+ +CG + W RG G
Sbjct: 849 LFNRWHSESWANQLTVCGAIIGWTRGTG 876
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.327 0.142 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,251,187
Number of Sequences: 164201
Number of extensions: 538777
Number of successful extensions: 1077
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1073
Number of HSP's gapped (non-prelim): 8
length of query: 114
length of database: 59,974,054
effective HSP length: 90
effective length of query: 24
effective length of database: 45,195,964
effective search space: 1084703136
effective search space used: 1084703136
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC149307.10