BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149305.9 - phase: 0 /pseudo
         (136 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310...    33  0.14
ILVC_CANBF (Q7VRM0) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...    27  9.8
GP35_MOUSE (Q9ES90) Probable G protein-coupled receptor GPR35          27  9.8

>M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310
           (ORF154)
          Length = 154

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 47  SIPAYKMQIH*LAHYICVIDHLNKTVHSFI*K*STNKG-MNMVGWDKITKAKKN-GGLGV 104
           ++P Y M    L+  +C    L   +  F      NK  ++ V W K+ K+K++ GGLG 
Sbjct: 2   ALPVYAMSCFRLSKLLC--KKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGF 59

Query: 105 RVVRKQNIALLGKLVWNLLMPTNHLWSQIL 134
           R +   N ALL K  + ++   + L S++L
Sbjct: 60  RDLGWFNQALLAKQSFRIIHQPHTLLSRLL 89


>ILVC_CANBF (Q7VRM0) Ketol-acid reductoisomerase (EC 1.1.1.86)
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 492

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/27 (40%), Positives = 18/27 (65%)

Query: 89  GWDKITKAKKNGGLGVRVVRKQNIALL 115
           GW+ IT+A K GG+ + + R  N++ L
Sbjct: 257 GWEVITEALKQGGITLMMDRLSNVSKL 283


>GP35_MOUSE (Q9ES90) Probable G protein-coupled receptor GPR35
          Length = 307

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/24 (45%), Positives = 16/24 (65%)

Query: 4  NHFNIIFKLISLVCGFLINKLASW 27
          N+F II+  + LV G L+N +A W
Sbjct: 17 NNFFIIYSALLLVLGLLLNSVALW 40


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.337    0.146    0.476 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,385,877
Number of Sequences: 164201
Number of extensions: 478069
Number of successful extensions: 1523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1520
Number of HSP's gapped (non-prelim): 3
length of query: 136
length of database: 59,974,054
effective HSP length: 98
effective length of query: 38
effective length of database: 43,882,356
effective search space: 1667529528
effective search space used: 1667529528
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 59 (27.3 bits)