BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149210.5 + phase: 0 
         (128 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MBD3_HUMAN (O95983) Methyl-CpG binding protein 3 (Methyl-CpG bin...    38  0.003
MBD3_MOUSE (Q9Z2D8) Methyl-CpG binding protein 3 (Methyl-CpG bin...    37  0.008
STSP_STAAU (P04188) Glutamyl endopeptidase precursor (EC 3.4.21....    32  0.32
MYBH_DICDI (P34127) Myb-like protein (Fragment)                        31  0.42
ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7...    30  0.72
WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7...    29  2.1
YHHF_HAEIN (P44869) Putative methylase HI0767 (EC 2.1.1.-)             28  2.7
ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7...    28  2.7
RPOB_LACLA (Q9CEN6) DNA-directed RNA polymerase beta chain (EC 2...    28  2.7
HISX_METTH (O26327) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)       27  6.1
ROB1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (D...    27  7.9

>MBD3_HUMAN (O95983) Methyl-CpG binding protein 3 (Methyl-CpG
           binding domain protein 3)
          Length = 291

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 38  VPDGWLVEQRPRPS--NPNHIDRYYIEPHTGQKFRSLVSVQRYLNGG---ETGDYLPTQR 92
           +P GW  E+ PR S  +  H D +Y  P +G+KFRS   + RYL G     T D+   + 
Sbjct: 11  LPQGWEREEVPRRSGLSAGHRDVFYYSP-SGKKFRSKPQLARYLGGSMDLSTFDFRTGKM 69

Query: 93  IISENNNN 100
           ++S+ N +
Sbjct: 70  LMSKMNKS 77


>MBD3_MOUSE (Q9Z2D8) Methyl-CpG binding protein 3 (Methyl-CpG
           binding domain protein 3)
          Length = 285

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 23/68 (33%), Positives = 37/68 (53%), Gaps = 6/68 (8%)

Query: 38  VPDGWLVEQRPRPS--NPNHIDRYYIEPHTGQKFRSLVSVQRYLNGG---ETGDYLPTQR 92
           +P GW  E+ PR S  +  H D +Y  P +G+KFRS   + RYL G     T D+   + 
Sbjct: 11  LPQGWEREEVPRRSGLSAGHRDVFYYSP-SGKKFRSKPQLARYLGGSMDLSTFDFRTGKM 69

Query: 93  IISENNNN 100
           ++++ N +
Sbjct: 70  LMNKMNKS 77


>STSP_STAAU (P04188) Glutamyl endopeptidase precursor (EC 3.4.21.19)
           (Staphylococcal serine proteinase) (V8 proteinase)
           (Endoproteinase Glu-C)
          Length = 336

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 28  IVVQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGETGDY 87
           I V++P+   +  G +V +    +N + +D  + +PH  + F S ++   Y NGG T + 
Sbjct: 93  IQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQ 152

Query: 88  L 88
           +
Sbjct: 153 I 153


>MYBH_DICDI (P34127) Myb-like protein (Fragment)
          Length = 451

 Score = 31.2 bits (69), Expect = 0.42
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 46  QRPRPSNPNHIDRYYIEPHTGQKFRSLVSVQRYLNGGETGD-----YLPTQRIISENNNN 100
           ++P+  N + I++   +PH  Q   S +  +   NG    D     YL T  I   NNNN
Sbjct: 373 KQPKKRNASEIEQTLSQPHINQHESSPIVFENISNGNNKIDIPAAQYLMTNGISCINNNN 432

Query: 101 VSSN 104
            ++N
Sbjct: 433 NNNN 436


>ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC
           2.7.1.37) (Unc-51-like kinase 1) (Unc51.1
           serine/threonine kinase)
          Length = 1051

 Score = 30.4 bits (67), Expect = 0.72
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 71  SLVSVQRYLNGGETGDYLPTQRIISEN 97
           S+  V  Y NGG+  DYL T R +SE+
Sbjct: 87  SVYLVMEYCNGGDLADYLHTMRTLSED 113


>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC
            2.7.1.37) (Protein kinase with no lysine 2) (Protein
            kinase, lysine-deficient 2) (P/OKcl.13)
          Length = 2297

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 6    DVEMEHLNLNRNVMNLREKELQIV--VQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIEP 63
            D E+E  ++ + + +LREK L+ +  +QS  K E+   +    +P P N   +  ++  P
Sbjct: 1922 DSELEDADIKKELQSLREKHLKEISELQSQQKQEIEALYRRLGKPLPPN---VGFFHTAP 1978

Query: 64   HTGQK 68
             TG++
Sbjct: 1979 PTGRR 1983


>YHHF_HAEIN (P44869) Putative methylase HI0767 (EC 2.1.1.-)
          Length = 193

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 12  LNLNRNVMNLREKELQIVVQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIEP 63
           L L++ V N  +K LQ +  S  + EV +   ++   +P N  H D  +++P
Sbjct: 82  LELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133


>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC
           2.7.1.37) (Unc-51-like kinase 1)
          Length = 1050

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 12/27 (44%), Positives = 16/27 (58%)

Query: 71  SLVSVQRYLNGGETGDYLPTQRIISEN 97
           S+  V  Y NGG+  DYL   R +SE+
Sbjct: 87  SVYLVMEYCNGGDLADYLHAMRTLSED 113


>RPOB_LACLA (Q9CEN6) DNA-directed RNA polymerase beta chain (EC
            2.7.7.6) (RNAP beta subunit) (Transcriptase beta chain)
            (RNA polymerase beta subunit)
          Length = 1196

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 14/44 (31%), Positives = 26/44 (58%)

Query: 3    RSMDVEMEHLNLNRNVMNLREKELQIVVQSPSKVEVPDGWLVEQ 46
            +S+ ++M+ L+ +RNV++LRE +   V+  P   E+    L  Q
Sbjct: 1132 QSLGLDMKVLDADRNVLDLRELDEDEVMTRPDNTEITPEMLEAQ 1175


>HISX_METTH (O26327) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)
          Length = 426

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 23/78 (29%), Positives = 33/78 (41%), Gaps = 16/78 (20%)

Query: 6   DVEMEHLNLNRNVMN-LREKELQIVVQSPSKVEVPDGWLVEQRPRPSNPNHIDRYYIEPH 64
           ++E  H NL   V   LRE    I  +   ++++P GW+ E RP                
Sbjct: 67  EIEEAHKNLEPGVKEALREAASNI--EEFHRMQMPSGWMSEVRPGVM------------- 111

Query: 65  TGQKFRSLVSVQRYLNGG 82
            GQ  R + SV  Y+ GG
Sbjct: 112 AGQLVRPIDSVGCYIPGG 129


>ROB1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1)
           (Deleted in U twenty twenty)
          Length = 1651

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 21/61 (34%), Positives = 30/61 (48%), Gaps = 6/61 (9%)

Query: 36  VEVPDGWLVEQRPRPSNPNHIDRYYIEPHTGQKFRSLVSV--QRYLNGGETGDYLPTQRI 93
           +EV +  +  Q PRP++PN I     +P      R+ V++  Q  LN G T    PT  I
Sbjct: 540 IEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGAT----PTSYI 595

Query: 94  I 94
           I
Sbjct: 596 I 596


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.137    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,305,959
Number of Sequences: 164201
Number of extensions: 689714
Number of successful extensions: 1442
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1437
Number of HSP's gapped (non-prelim): 11
length of query: 128
length of database: 59,974,054
effective HSP length: 104
effective length of query: 24
effective length of database: 42,897,150
effective search space: 1029531600
effective search space used: 1029531600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)