BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149210.3 + phase: 0
(195 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARA3_ARATH (P28186) Ras-related protein ARA-3 288 6e-78
RAB1_BETVU (Q39433) Ras-related protein RAB1BV 279 3e-75
SAS1_DICDI (P20790) GTP-binding protein SAS1 232 5e-61
SAS2_DICDI (P20791) GTP-binding protein SAS2 230 1e-60
YPT2_VOLCA (P36861) GTP-binding protein yptV2 224 1e-58
YPT2_SCHPO (P17609) Ras-related protein ypt2 (SEC4 homolog) 224 1e-58
RB8B_RAT (P70550) Ras-related protein Rab-8B 209 4e-54
RB8B_MOUSE (P61028) Ras-related protein Rab-8B 209 4e-54
RB8B_HUMAN (Q92930) Ras-related protein Rab-8B 209 4e-54
RB10_MOUSE (P61027) Ras-related protein Rab-10 207 2e-53
RB10_HUMAN (P61026) Ras-related protein Rab-10 207 2e-53
RB10_CANFA (P24409) Ras-related protein Rab-10 207 2e-53
RB8A_MOUSE (P55258) Ras-related protein Rab-8A (Oncogene c-mel) 206 2e-53
RB8A_HUMAN (P61006) Ras-related protein Rab-8A (Oncogene c-mel) 206 3e-53
RB8A_CANFA (P61007) Ras-related protein Rab-8A (Oncogene c-mel) 206 3e-53
RAB8_DISOM (P22128) Ras-related protein Rab-8 (ORA2) 206 3e-53
RYL1_YARLI (P41924) Ras-like GTP-binding protein RYL1 203 2e-52
RB10_DISOM (P22127) Ras-related protein Rab-10 (ORA1) 201 1e-51
RB13_HUMAN (P51153) Ras-related protein Rab-13 197 2e-50
RB10_RAT (P35281) Ras-related protein Rab-10 196 3e-50
>ARA3_ARATH (P28186) Ras-related protein ARA-3
Length = 216
Score = 288 bits (737), Expect = 6e-78
Identities = 148/193 (76%), Positives = 168/193 (86%), Gaps = 4/193 (2%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FTTS+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 24 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 83
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDESSFNNI NWIR+IEQH+SDN VNKILVGNK DMDESKRAVP +
Sbjct: 84 YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN-VNKILVGNKADMDESKRAVPTA 142
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL--PDSKKTPSRIRINKHNNAT 183
KGQALA++YGIKFFETSAKTNLNV+E FFSI RDIKQRL DS+ P+ I+I++ + A
Sbjct: 143 KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAA 202
Query: 184 -AARGSQKSECCG 195
A + +QKS CCG
Sbjct: 203 GAGQATQKSACCG 215
>RAB1_BETVU (Q39433) Ras-related protein RAB1BV
Length = 215
Score = 279 bits (714), Expect = 3e-75
Identities = 146/193 (75%), Positives = 164/193 (84%), Gaps = 5/193 (2%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FTTS+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 24 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 83
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDESSFNNI NWIR+IEQH+SDN VNKILVGNK DMDESKRAVP +
Sbjct: 84 YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN-VNKILVGNKADMDESKRAVPTA 142
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDS---KKTPSRIRINKHNNA 182
KGQALA++YGIKFFETSAKTNLNV+E FFSIARDIKQRL DS ++ I I K +
Sbjct: 143 KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITI-KPADQ 201
Query: 183 TAARGSQKSECCG 195
+ + + KS CCG
Sbjct: 202 SGNQAAAKSACCG 214
>SAS1_DICDI (P20790) GTP-binding protein SAS1
Length = 208
Score = 232 bits (591), Expect = 5e-61
Identities = 117/189 (61%), Positives = 151/189 (78%), Gaps = 4/189 (2%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFS+ FT S+ITT+GID+K R IEL+GK+I LQ+WDTAGQERFRTITTA
Sbjct: 24 SGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTA 83
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDE SF NI NWIR+IEQH++D+ VNK+L+GNK DM E K+ V S
Sbjct: 84 YYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDS-VNKMLIGNKCDMAE-KKVVDSS 141
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
+G++LA++YGIKF ETSAK ++NV+EAF S+A+DIK+R+ D+ + ++ + A
Sbjct: 142 RGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPN--EQPQVVQPGTNLGA 199
Query: 186 RGSQKSECC 194
++K CC
Sbjct: 200 NNNKKKACC 208
>SAS2_DICDI (P20791) GTP-binding protein SAS2
Length = 203
Score = 230 bits (587), Expect = 1e-60
Identities = 118/189 (62%), Positives = 147/189 (77%), Gaps = 9/189 (4%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFSD FT S+I T+GID+K R IEL+GK+I LQ+WDTAGQERFRTITTA
Sbjct: 24 SGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTA 83
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDE SF +I NWIR+IEQH+SD+ VNK+L+GNK DM E K+ V S
Sbjct: 84 YYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDS-VNKMLIGNKCDMTE-KKVVDSS 141
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
+G++LA++YGIKF ETSAK ++NV+EAF +A+DIK+R+ D+ P NN
Sbjct: 142 RGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTPNDPDHTICITPNN---- 197
Query: 186 RGSQKSECC 194
+K+ CC
Sbjct: 198 ---KKNTCC 203
>YPT2_VOLCA (P36861) GTP-binding protein yptV2
Length = 217
Score = 224 bits (571), Expect = 1e-58
Identities = 102/159 (64%), Positives = 139/159 (87%), Gaps = 1/159 (0%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRF+D FT+S+ITT+GID+K + +++DGK + LQ+WDTAGQERFRTIT+A
Sbjct: 22 SGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSA 81
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGA GI+LVYD+TDE+SFNN+ NW+R+IEQH+SDN VNKILVGNK+D+ E KR V +
Sbjct: 82 YYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDN-VNKILVGNKLDLAEDKRVVSIA 140
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL 164
+GQALA+++G +F+ETSAK N++V+EAF ++A+D+ R+
Sbjct: 141 RGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARM 179
>YPT2_SCHPO (P17609) Ras-related protein ypt2 (SEC4 homolog)
Length = 200
Score = 224 bits (571), Expect = 1e-58
Identities = 114/189 (60%), Positives = 144/189 (75%), Gaps = 6/189 (3%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRFS+ FT S+ITT+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 18 SGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 77
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILL+YDVTD+ SF+N+ W ++EQH+S+N V KIL+GNK D E +R V F
Sbjct: 78 YYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASEN-VYKILIGNKCDC-EDQRQVSFE 135
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
+GQALA++ G+KF E SAKTN+NVDEAFF++AR+IK++ D++ S N+ NN
Sbjct: 136 QGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFS----NQANNVDLG 191
Query: 186 RGSQKSECC 194
CC
Sbjct: 192 NDRTVKRCC 200
>RB8B_RAT (P70550) Ras-related protein Rab-8B
Length = 207
Score = 209 bits (531), Expect = 4e-54
Identities = 102/159 (64%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ LL RFS+ F T++I+T+GID+K R IELDGKKI LQ+WDTAGQERFRTITTA
Sbjct: 17 SGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+E SF+NI NWIR+IE+H+S + V ++++GNK DM++ KR V
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSD-VERMILGNKCDMND-KRQVSKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL 164
+G+ LA YGIKF ETSAK++ NV+EAFF++ARDI +L
Sbjct: 135 RGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
>RB8B_MOUSE (P61028) Ras-related protein Rab-8B
Length = 207
Score = 209 bits (531), Expect = 4e-54
Identities = 102/159 (64%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ LL RFS+ F T++I+T+GID+K R IELDGKKI LQ+WDTAGQERFRTITTA
Sbjct: 17 SGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+E SF+NI NWIR+IE+H+S + V ++++GNK DM++ KR V
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSD-VERMILGNKCDMND-KRQVSKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL 164
+G+ LA YGIKF ETSAK++ NV+EAFF++ARDI +L
Sbjct: 135 RGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
>RB8B_HUMAN (Q92930) Ras-related protein Rab-8B
Length = 207
Score = 209 bits (531), Expect = 4e-54
Identities = 102/159 (64%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ LL RFS+ F T++I+T+GID+K R IELDGKKI LQ+WDTAGQERFRTITTA
Sbjct: 17 SGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+E SF+NI NWIR+IE+H+S + V ++++GNK DM++ KR V
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSD-VERMILGNKCDMND-KRQVSKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL 164
+G+ LA YGIKF ETSAK++ NV+EAFF++ARDI +L
Sbjct: 135 RGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKL 173
>RB10_MOUSE (P61027) Ras-related protein Rab-10
Length = 200
Score = 207 bits (526), Expect = 2e-53
Identities = 97/189 (51%), Positives = 142/189 (74%), Gaps = 6/189 (3%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFSD F T++I+T+GID+K + +EL GKKI LQ+WDTAGQERF TITT+
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTS 77
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+ SF NI+ W+R+I++H++++ V ++L+GNK DMD+ KR VP
Sbjct: 78 YYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDD-KRVVPKG 135
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
KG+ +A ++GI+FFETSAK N+N+++AF ++A DI ++ P + + I+ T
Sbjct: 136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVT-- 193
Query: 186 RGSQKSECC 194
KS+CC
Sbjct: 194 --GWKSKCC 200
>RB10_HUMAN (P61026) Ras-related protein Rab-10
Length = 200
Score = 207 bits (526), Expect = 2e-53
Identities = 97/189 (51%), Positives = 142/189 (74%), Gaps = 6/189 (3%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFSD F T++I+T+GID+K + +EL GKKI LQ+WDTAGQERF TITT+
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTS 77
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+ SF NI+ W+R+I++H++++ V ++L+GNK DMD+ KR VP
Sbjct: 78 YYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDD-KRVVPKG 135
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
KG+ +A ++GI+FFETSAK N+N+++AF ++A DI ++ P + + I+ T
Sbjct: 136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVT-- 193
Query: 186 RGSQKSECC 194
KS+CC
Sbjct: 194 --GWKSKCC 200
>RB10_CANFA (P24409) Ras-related protein Rab-10
Length = 200
Score = 207 bits (526), Expect = 2e-53
Identities = 97/189 (51%), Positives = 142/189 (74%), Gaps = 6/189 (3%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFSD F T++I+T+GID+K + +EL GKKI LQ+WDTAGQERF TITT+
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTS 77
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+ SF NI+ W+R+I++H++++ V ++L+GNK DMD+ KR VP
Sbjct: 78 YYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDD-KRVVPKG 135
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
KG+ +A ++GI+FFETSAK N+N+++AF ++A DI ++ P + + I+ T
Sbjct: 136 KGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVT-- 193
Query: 186 RGSQKSECC 194
KS+CC
Sbjct: 194 --GWKSKCC 200
>RB8A_MOUSE (P55258) Ras-related protein Rab-8A (Oncogene c-mel)
Length = 206
Score = 206 bits (525), Expect = 2e-53
Identities = 100/164 (60%), Positives = 135/164 (81%), Gaps = 2/164 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFS+ F +++I+T+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+E SF+NI NWIR+IE+H+S + V K+++GNK D+++ KR V
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD-VEKMILGNKCDVND-KRQVSKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKK 169
+G+ LA YGIKF ETSAK N+NV+ AFF++ARDIK ++ + K
Sbjct: 135 RGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKNWK 178
>RB8A_HUMAN (P61006) Ras-related protein Rab-8A (Oncogene c-mel)
Length = 207
Score = 206 bits (524), Expect = 3e-53
Identities = 99/159 (62%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFS+ F +++I+T+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+E SF+NI NWIR+IE+H+S + V K+++GNK D+++ KR V
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD-VEKMILGNKCDVND-KRQVSKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL 164
+G+ LA YGIKF ETSAK N+NV+ AFF++ARDIK ++
Sbjct: 135 RGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
>RB8A_CANFA (P61007) Ras-related protein Rab-8A (Oncogene c-mel)
Length = 207
Score = 206 bits (524), Expect = 3e-53
Identities = 99/159 (62%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFS+ F +++I+T+GID+K R IELDGK+I LQ+WDTAGQERFRTITTA
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+E SF+NI NWIR+IE+H+S + V K+++GNK D+++ KR V
Sbjct: 77 YYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASAD-VEKMILGNKCDVND-KRQVSKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL 164
+G+ LA YGIKF ETSAK N+NV+ AFF++ARDIK ++
Sbjct: 135 RGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
>RAB8_DISOM (P22128) Ras-related protein Rab-8 (ORA2)
Length = 210
Score = 206 bits (524), Expect = 3e-53
Identities = 100/159 (62%), Positives = 132/159 (82%), Gaps = 2/159 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ LL RFS+ F T++I+T+GID+K R +ELDGKKI LQ+WDTAGQERFRTITTA
Sbjct: 17 SGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+ VYD+T+E SF+NI NWIR+IE+H+S + V ++++GNK DM+E KR V
Sbjct: 77 YYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSD-VERMILGNKCDMNE-KRQVSKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRL 164
+G+ LA YGIKF ETSAK+++NV+EAF ++ARDI +L
Sbjct: 135 RGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKL 173
>RYL1_YARLI (P41924) Ras-like GTP-binding protein RYL1
Length = 203
Score = 203 bits (516), Expect = 2e-52
Identities = 104/189 (55%), Positives = 137/189 (72%), Gaps = 5/189 (2%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGKS LLLRF + FT S+ITT+GID+K R I++ +++ LQVWDTAGQERFRTITTA
Sbjct: 20 SGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTA 79
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGILLVYDVTDE SFNNI NW ++++ ++++ V ILVGNK D+DE KR V
Sbjct: 80 YYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEG-VELILVGNKCDLDE-KRVVSTE 137
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
+GQALA+K+GI F E S+KTN+NV+E F+S+A I+ + +K S + N
Sbjct: 138 QGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKGNESG---SGGINIAEG 194
Query: 186 RGSQKSECC 194
+ S+CC
Sbjct: 195 EENSASKCC 203
>RB10_DISOM (P22127) Ras-related protein Rab-10 (ORA1)
Length = 200
Score = 201 bits (510), Expect = 1e-51
Identities = 98/189 (51%), Positives = 142/189 (74%), Gaps = 7/189 (3%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFSD F T++I+T+GID+K + +EL GKKI LQ+WDTAGQERF TITT+
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTS 77
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+ SF NI+ W+R+I++H++++ V ++L+GNK DM E KR V S
Sbjct: 78 YYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANED-VERMLLGNKCDM-EDKRVVLKS 135
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
KG+ +A ++ I+FFETSAK N+N+++AF ++A DI Q+ P K P R + + +T
Sbjct: 136 KGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTP--VKEPDRENV---DISTTG 190
Query: 186 RGSQKSECC 194
G+ +CC
Sbjct: 191 GGTGLKKCC 199
>RB13_HUMAN (P51153) Ras-related protein Rab-13
Length = 203
Score = 197 bits (500), Expect = 2e-50
Identities = 94/155 (60%), Positives = 129/155 (82%), Gaps = 2/155 (1%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ L++RF++ F +YI+T+GID+K R ++++GKKI LQVWDTAGQERF+TITTA
Sbjct: 17 SGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTA 76
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+TDE SF NI NW++SI++++S V ++L+GNK DM E+KR V
Sbjct: 77 YYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG-VERLLLGNKCDM-EAKRKVQKE 134
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDI 160
+ LA ++GI+FFETSAK+++NVDEAF S+ARDI
Sbjct: 135 QADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>RB10_RAT (P35281) Ras-related protein Rab-10
Length = 200
Score = 196 bits (498), Expect = 3e-50
Identities = 94/189 (49%), Positives = 137/189 (71%), Gaps = 6/189 (3%)
Query: 6 AGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTA 65
+GVGK+ +L RFSD F T++I+T+ ID+K + +EL GKKI LQ+WDTAGQERF TITT+
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTS 77
Query: 66 YYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFS 125
YYRGAMGI+LVYD+T+ SF NI+ W+R+I+QH++++ V ++L+ NK DMD KR VP
Sbjct: 78 YYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANED-VERMLLRNKCDMDH-KRVVPKG 135
Query: 126 KGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSRIRINKHNNATAA 185
KG+ +A ++ I+FFETSAK N+N+++AF ++ DI ++ P + + I+ T
Sbjct: 136 KGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKEPNSENVDISSGGGVT-- 193
Query: 186 RGSQKSECC 194
KS+CC
Sbjct: 194 --GWKSKCC 200
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,346,758
Number of Sequences: 164201
Number of extensions: 749699
Number of successful extensions: 3482
Number of sequences better than 10.0: 720
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 2193
Number of HSP's gapped (non-prelim): 727
length of query: 195
length of database: 59,974,054
effective HSP length: 104
effective length of query: 91
effective length of database: 42,897,150
effective search space: 3903640650
effective search space used: 3903640650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC149210.3