BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149209.7 - phase: 0
(384 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SSP2_PLAYO (Q01443) Sporozoite surface protein 2 precursor 44 5e-04
CSP_PLAFL (P05691) Circumsporozoite protein (CS) (Fragment) 42 0.003
PSP1_YEAST (P50896) PSP1 protein (GIN5 protein) 42 0.003
CSP_PLAFO (P19597) Circumsporozoite protein precursor (CS) 42 0.003
CSP_PLARE (P26694) Circumsporozoite protein precursor (CS) 41 0.004
CSP_PLAFA (P02893) Circumsporozoite protein precursor (CS) 41 0.004
CSP_PLAFW (P08307) Circumsporozoite protein precursor (CS) 41 0.006
HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2... 40 0.008
CSP_PLAFT (P13814) Circumsporozoite protein precursor (CS) 40 0.010
Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050 40 0.013
YVCE_BACSU (P40767) Hypothetical protein yvcE (PSPA2) 39 0.017
PDR1_YEAST (P12383) Pleiotropic drug resistance regulatory prote... 39 0.017
NEST_RAT (P21263) Nestin 39 0.017
CAFA_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1... 39 0.029
TRHY_SHEEP (P22793) Trichohyalin 38 0.038
ROC_HUMAN (P07910) Heterogeneous nuclear ribonucleoproteins C1/C... 38 0.038
RIM_CAEEL (Q22366) Rab-3 interacting molecule unc-10 (Rim) (Unco... 38 0.038
MYSJ_DICDI (P54697) Myosin IJ heavy chain 38 0.038
ITN1_XENLA (O42287) Intersectin 1 38 0.038
IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B ... 38 0.038
>SSP2_PLAYO (Q01443) Sporozoite surface protein 2 precursor
Length = 827
Score = 44.3 bits (103), Expect = 5e-04
Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 11/154 (7%)
Query: 2 DPTN-NQSNTQNSSDYPFSYQNQFPNSHPQNPNQFPNQHPQNPNQFPN--QNPQNMSNFG 58
+P N N N N+ + P + N ++P NPN PN +P NPN PN NP N +N
Sbjct: 320 NPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNN-PN-NPNNPNN-PNNPNNPNNPNNPN 376
Query: 59 FASNFNHPSFVPNNFNPYFRSMMGYSSQTP---PFNGYMPMVNENFQSVGEYPDFSSQIN 115
+N N PS PNN NP R+ + P N P NE P+ S N
Sbjct: 377 NPNNPNDPS-NPNNPNPKKRNPKRRNPNKPKPNKPNPNKPNPNEPSNPNKPNPNEPSNPN 435
Query: 116 RGGMTR-DNEVAPTPEDTTPKSKRNQQPSWNTEQ 148
+ N P P + + +K N N +
Sbjct: 436 KPNPNEPSNPNKPNPNEPSNPNKPNPNEPLNPNE 469
Score = 39.7 bits (91), Expect = 0.013
Identities = 29/75 (38%), Positives = 40/75 (52%), Gaps = 5/75 (6%)
Query: 2 DPTN-NQSNTQNSSDYPFSYQNQFPNSHPQNPNQFPNQHPQNPNQFPNQNPQNMSNFGFA 60
+P N N N N+ + P + N ++P NPN PN +P NPN PN NP N +N
Sbjct: 302 EPVNPNDPNDPNNPNNPNNPNNPNNPNNPNNPNN-PN-NPNNPNN-PN-NPNNPNNPNNP 357
Query: 61 SNFNHPSFVPNNFNP 75
+N N+P+ N NP
Sbjct: 358 NNPNNPNNPNNPNNP 372
Score = 38.9 bits (89), Expect = 0.022
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQNPNQFPNQHPQNPNQFPNQNPQNMSNFGFASNFNH 65
N N N+ + P + N ++P NPN PN +P NPN PN NP N +N +N N+
Sbjct: 310 NDPNNPNNPNNPNNPNNPNNPNNPNNPNN-PN-NPNNPNN-PN-NPNNPNNPNNPNNPNN 365
Query: 66 PSFVPNNFNP 75
P+ N NP
Sbjct: 366 PNNPNNPNNP 375
Score = 35.8 bits (81), Expect = 0.19
Identities = 43/152 (28%), Positives = 59/152 (38%), Gaps = 16/152 (10%)
Query: 2 DPTN-NQSNTQNSSDYPFSYQNQFPNSHPQNPNQFPNQHPQNPN--------QFPNQNPQ 52
+P N N N N+ + P + N ++P NPN N P NPN + PN+
Sbjct: 350 NPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNDPSN--PNNPNPKKRNPKRRNPNKPKP 407
Query: 53 NMSNFGFASNFNHPSFVPNNFNPYFRSMMGYSSQTPPFNGYMPMVNENFQSVGEYPDFSS 112
N N N N PS PN NP S + P N P N N S P+ +
Sbjct: 408 NKPNPN-KPNPNEPS-NPNKPNPNEPSNPNKPNPNEPSNPNKP--NPNEPSNPNKPNPNE 463
Query: 113 QINRGGMTRDNEVAPTPEDTTPKSKRN-QQPS 143
+N + NE + + P N +PS
Sbjct: 464 PLNPNEPSNPNEPSNPNAPSNPNEPSNPNEPS 495
Score = 35.8 bits (81), Expect = 0.19
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 11/152 (7%)
Query: 3 PTNNQSNTQNSSDYPFSYQNQFPNSHPQNPNQFPNQHPQNPNQ-------FPNQ--NPQN 53
P N+ N S+ N+ N + NPN+ N + NPN+ PN+ NP
Sbjct: 410 PNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPLNPNE 469
Query: 54 MSNFGFASNFNHPSFVPNNFNPYFRSMMGY-SSQTPPFNGYMPMVNENFQSVGEYPDFSS 112
SN SN N PS NP S S+ P N P + + E + +
Sbjct: 470 PSNPNEPSNPNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKPSNPNEPSNPNE 529
Query: 113 QINRGGMTRDNEVAPTPEDTTPKSKRN-QQPS 143
+N + NE + E + P+ N ++PS
Sbjct: 530 PLNPNEPSNPNEPSNPNEPSNPEEPSNPKEPS 561
Score = 34.7 bits (78), Expect = 0.42
Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 11/151 (7%)
Query: 2 DPTN-NQSNTQNSSDYPFSYQNQFPNSHPQNPNQFPNQHPQNPNQFPN-QNPQNMSNFGF 59
+P N N N N+ + P + N ++P NPN PN +P NPN N NP
Sbjct: 341 NPNNPNNPNNPNNPNNPNNPNNPNNPNNPNNPNN-PN-NPNNPNDPSNPNNPNPKKRNPK 398
Query: 60 ASNFNHP---SFVPNNFNPYFRSMMGYSSQTPPFNGYMPMVNENFQSVGEYPDFSSQINR 116
N N P PN NP S + P N P NE P+ S N+
Sbjct: 399 RRNPNKPKPNKPNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNK 458
Query: 117 GGMT---RDNEVAPTPEDTTPKSKRN-QQPS 143
NE + E + P + N +PS
Sbjct: 459 PNPNEPLNPNEPSNPNEPSNPNAPSNPNEPS 489
Score = 32.0 bits (71), Expect = 2.7
Identities = 36/146 (24%), Positives = 57/146 (38%), Gaps = 23/146 (15%)
Query: 29 PQNPNQFPNQHPQNPNQF------PNQNPQNMSNFGFASNFNHPSFVPNNFNPYFRSMMG 82
PQ N P+ P+NP+ PN N +N +N +PN P
Sbjct: 655 PQKGNNIPSNLPENPSDSEVEYPRPNDNGENSNN-----TMKSKKNIPNEPIP------- 702
Query: 83 YSSQTPPFNGYMPMVNENFQSVGEYPDFSSQINRGGMTRDNEVAPTPEDTTPKSKRNQQP 142
S P+ G+ + + +S +Y + + +N+ +D P E K+K NQ
Sbjct: 703 -SPGDNPYKGHEERIPKPHRSNDDYV-YDNNVNKN--NKDEPEIPNNEYEEDKNK-NQSK 757
Query: 143 SWNTEQNLVLISGWIKYGTCSVVGRN 168
S N + I G + C+ VG N
Sbjct: 758 SNNGYKIAGGIIGGLAILGCAGVGYN 783
Score = 31.6 bits (70), Expect = 3.5
Identities = 35/126 (27%), Positives = 50/126 (38%), Gaps = 13/126 (10%)
Query: 29 PQNPNQFPN-----QHPQNPNQFPN--QNPQNMSNFGFASNFNHPSFVPNNFNPYFRSMM 81
P PN+ P + P NPN PN NP N +N +N N+P+ N NP +
Sbjct: 287 PVIPNKIPEKPSNPEEPVNPND-PNDPNNPNNPNNPNNPNNPNNPNNPNNPNNP--NNPN 343
Query: 82 GYSSQTPPFNGYMPMVNENFQSVGEYPDFSSQINRGGMTRD--NEVAPTPEDTTPKSKRN 139
++ P N P N N + P+ + N D N P P+ PK +
Sbjct: 344 NPNNPNNPNNPNNPN-NPNNPNNPNNPNNPNNPNNPNNPNDPSNPNNPNPKKRNPKRRNP 402
Query: 140 QQPSWN 145
+P N
Sbjct: 403 NKPKPN 408
>CSP_PLAFL (P05691) Circumsporozoite protein (CS) (Fragment)
Length = 315
Score = 42.0 bits (97), Expect = 0.003
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 1 MDPTNNQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFG 58
+DP N + N++ P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 177 VDPNANPNANPNAN--PNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 234
Query: 59 FASNFN-HPSFVPN---NFNP 75
+N N +P+ PN N NP
Sbjct: 235 PNANPNANPNANPNANPNANP 255
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 2 DPTNNQSNTQNSSDY--PFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNF 57
DP N + N++ P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 106 DPNANPNVDPNANPNVDPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNA 165
Query: 58 GFASNFNHPSFVPNNFNP 75
+N N V N NP
Sbjct: 166 NPNANPNANPNVDPNANP 183
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 192 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 251
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 252 NANPNANPNANPNANP 267
Score = 39.3 bits (90), Expect = 0.017
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 168 NANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 227
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 228 NANPNANPNANPNANP 243
Score = 38.5 bits (88), Expect = 0.029
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-----NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGF 59
N + N + P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 152 NANPNANPNANPNANPNANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANP 211
Query: 60 ASNFN-HPSFVPN---NFNP 75
+N N +P+ PN N NP
Sbjct: 212 NANPNANPNANPNANPNANP 231
Score = 37.0 bits (84), Expect = 0.084
Identities = 23/61 (37%), Positives = 30/61 (48%), Gaps = 2/61 (3%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 208 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 267
Query: 64 N 64
N
Sbjct: 268 N 268
Score = 31.6 bits (70), Expect = 3.5
Identities = 23/70 (32%), Positives = 31/70 (43%), Gaps = 3/70 (4%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQNPNQFPNQNPQNMSNFGFASNFN 64
N + N + P + N PN++P NPN PN++ Q Q N N N N N
Sbjct: 236 NANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNGQ--GHNMPNDPNRNVDENAN 293
Query: 65 HPSFVPNNFN 74
+ V NN N
Sbjct: 294 GNNAVKNNNN 303
>PSP1_YEAST (P50896) PSP1 protein (GIN5 protein)
Length = 841
Score = 41.6 bits (96), Expect = 0.003
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 27/147 (18%)
Query: 12 NSSDYPFSYQNQFPNSHP---------QNPNQFPNQHPQNPNQFPNQNPQNMSNFGFASN 62
N PFS+QN F HP + N P P + N N M N+ A
Sbjct: 97 NQQQQPFSHQNGFIQEHPSSNLTSFQMSSSNSEPMSAPPISSNNNNLNSTQMGNYQ-AQQ 155
Query: 63 FNHPSFVPNNFNPYFRSMMGYSSQTPPFNGYMPMVNENFQSVGEYPDFSSQINRGGMTRD 122
+ P F N+F+ +MG + YM ++N+ ++G F+S N G
Sbjct: 156 RSFPQFNGNSFHSNGNDLMGNRMD----SDYMRLMNKT--NIG----FTS--NSG----S 199
Query: 123 NEVAPTPEDTTPKSKRNQQ-PSWNTEQ 148
N AP+ P S NQQ PS+N +Q
Sbjct: 200 NFAAPSHSAGNPSSMNNQQVPSFNWQQ 226
>CSP_PLAFO (P19597) Circumsporozoite protein precursor (CS)
Length = 397
Score = 41.6 bits (96), Expect = 0.003
Identities = 29/79 (36%), Positives = 38/79 (47%), Gaps = 4/79 (5%)
Query: 1 MDPTNNQSNTQNSSDY--PFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSN 56
+DP N + N++ P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 126 VDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPN 185
Query: 57 FGFASNFNHPSFVPNNFNP 75
+N N V N NP
Sbjct: 186 ANPNANPNANPNVDPNANP 204
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 145 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNVDPNANP 204
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 205 NANPNANPNANPNANP 220
Score = 39.7 bits (91), Expect = 0.013
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 189 NANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 248
Query: 64 N-HPSFVPN---NFNPYFRSMMGYSSQTPPFNGYMPMVNENFQSVGEYPDFSSQINRGGM 119
N +P+ PN N NP + P N N+N Q G+ + + NR
Sbjct: 249 NANPNANPNANPNANP---------NANPNAN-----PNKNNQGNGQGHNMPNDPNRNVD 294
Query: 120 TRDNEVAPTPEDTTPKSKRNQQPS 143
N ++ K+ N++PS
Sbjct: 295 ENAN------ANSAVKNNNNEEPS 312
Score = 39.3 bits (90), Expect = 0.017
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 137 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 196
Query: 64 N-HPSFVPN---NFNP 75
N P+ PN N NP
Sbjct: 197 NVDPNANPNANPNANP 212
Score = 33.9 bits (76), Expect = 0.71
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 22 NQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNFN-HPSFVPN---NFNP 75
N PN++P +PN PN P NPN PN NP N +N N +P+ PN N NP
Sbjct: 101 NPDPNANPNVDPNANPNVDPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANP 160
>CSP_PLARE (P26694) Circumsporozoite protein precursor (CS)
Length = 388
Score = 41.2 bits (95), Expect = 0.004
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 188 NANPNVNPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 247
Query: 64 N-HPSFVPN---NFNPYFRSMMGYSSQTPPFNGYMPMVNENFQSVGEYPDFSSQINRGGM 119
N +P+ PN N NP + P N VNEN + N G
Sbjct: 248 NANPNANPNANPNANPNRNNEANGQGHNKP-NDQNRNVNEN-----------ANANNAGR 295
Query: 120 TRDNE 124
+NE
Sbjct: 296 NNNNE 300
Score = 38.1 bits (87), Expect = 0.038
Identities = 31/87 (35%), Positives = 42/87 (47%), Gaps = 12/87 (13%)
Query: 1 MDPTNNQSNTQNSSDY--PFSYQNQFPNSHPQ-----NPNQFPNQHPQ-NPNQFPNQNPQ 52
+DP N + N++ P + N PN++P NPN PN +P NPN PN NP
Sbjct: 153 VDPNANPNVNPNANPNVDPNANPNVNPNANPNVNPNANPNVNPNANPNANPNANPNANPN 212
Query: 53 NMSNFGFASNFN-HPSFVPN---NFNP 75
N +N N +P+ PN N NP
Sbjct: 213 ANPNANPNANPNANPNANPNANPNANP 239
Score = 38.1 bits (87), Expect = 0.038
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 1 MDPTNNQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFG 58
+DP N + N++ P N PN +P NPN PN +P NPN PN NP N
Sbjct: 137 VDPNANPNVDPNAN--PNVDPNANPNVNPNANPNVDPNANPNVNPNANPNVNPNANPNVN 194
Query: 59 FASNFN-HPSFVPN---NFNP 75
+N N +P+ PN N NP
Sbjct: 195 PNANPNANPNANPNANPNANP 215
>CSP_PLAFA (P02893) Circumsporozoite protein precursor (CS)
Length = 412
Score = 41.2 bits (95), Expect = 0.004
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 1 MDPTNNQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFG 58
+DP N + N++ P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 145 VDPNANPNANPNAN--PNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 202
Query: 59 FASNFN-HPSFVPN---NFNP 75
+N N P+ PN N NP
Sbjct: 203 PNANPNVDPNANPNANPNANP 223
Score = 40.8 bits (94), Expect = 0.006
Identities = 29/79 (36%), Positives = 38/79 (47%), Gaps = 4/79 (5%)
Query: 1 MDPTNNQSNTQNSSDY--PFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSN 56
+DP N + N++ P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 137 VDPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPN 196
Query: 57 FGFASNFNHPSFVPNNFNP 75
+N N V N NP
Sbjct: 197 ANPNANPNANPNVDPNANP 215
Score = 40.0 bits (92), Expect = 0.010
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-----NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGF 59
N + N + P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 184 NANPNANPNANPNANPNANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANP 243
Query: 60 ASNFN-HPSFVPN---NFNPYFRSMMGYSSQTPPFNGYMPMV--NENFQSVGEYPDFSSQ 113
+N N +P+ PN N NP ++ P N+N Q G+ + +
Sbjct: 244 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNGQGHNMPND 303
Query: 114 INRGGMTRDNEVAPTPEDTTPKSKRNQQPS-WNTEQNLVLISGWI--KYGTCSVVGRN 168
NR N + K+ N++PS + EQ L I I ++ CSV N
Sbjct: 304 PNRNVDENAN------ANNAVKNNNNEEPSDKHIEQYLKKIKNSISTEWSPCSVTCGN 355
>CSP_PLAFW (P08307) Circumsporozoite protein precursor (CS)
Length = 442
Score = 40.8 bits (94), Expect = 0.006
Identities = 29/79 (36%), Positives = 38/79 (47%), Gaps = 4/79 (5%)
Query: 1 MDPTNNQSNTQNSSDY--PFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSN 56
+DP N + N++ P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 139 VDPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPN 198
Query: 57 FGFASNFNHPSFVPNNFNP 75
+N N V N NP
Sbjct: 199 ANPNANPNANPNVDPNANP 217
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 238 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 297
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 298 NANPNANPNANPNANP 313
Score = 38.9 bits (89), Expect = 0.022
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 246 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 305
Query: 64 N-HPSFVPN 71
N +P+ PN
Sbjct: 306 NANPNANPN 314
Score = 38.5 bits (88), Expect = 0.029
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 198 NANPNANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 257
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 258 NANPNANPNANPNANP 273
Score = 38.1 bits (87), Expect = 0.038
Identities = 28/76 (36%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P +PN PN +P NPN PN NP N +N
Sbjct: 186 NANPNANPNANPNANPNANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANP 245
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 246 NANPNANPNANPNANP 261
Score = 31.6 bits (70), Expect = 3.5
Identities = 23/70 (32%), Positives = 31/70 (43%), Gaps = 3/70 (4%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQNPNQFPNQNPQNMSNFGFASNFN 64
N + N + P + N PN++P NPN PN++ Q Q N N N N N
Sbjct: 286 NANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNGQ--GHNMPNDPNRNVDENAN 343
Query: 65 HPSFVPNNFN 74
+ V NN N
Sbjct: 344 ANNAVKNNNN 353
>HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2
(Cytadherence accessory protein 2)
Length = 1805
Score = 40.4 bits (93), Expect = 0.008
Identities = 30/89 (33%), Positives = 53/89 (58%), Gaps = 8/89 (8%)
Query: 296 AAKKKGKKKSKGETLEKVEKEWV-QFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKM 354
A K+ K+++ + +KV+ E + Q KE QE ++L+EL LVK+QK + Q +
Sbjct: 458 AKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQK------QDQKENE 511
Query: 355 KMYLKLRDEEHLDDRKNELLGKLERELFE 383
++ + + ++H D +NEL K ++ELFE
Sbjct: 512 LLFFEKQLKQHQADFENELEAK-QQELFE 539
Score = 31.6 bits (70), Expect = 3.5
Identities = 24/91 (26%), Positives = 43/91 (46%), Gaps = 8/91 (8%)
Query: 292 MDRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQ----EIEQLKELTLVKQQKNKLLQE 347
++R K + K+K +++ E+ Q K K + E+ E ++Q+K KL QE
Sbjct: 544 LERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQE 603
Query: 348 KTQAKKMKMYLKLRDEEHLDDRKNELLGKLE 378
+T ++ L R L ++ ELL + E
Sbjct: 604 RTYFERNAAVLSNR----LQQKREELLQQKE 630
Score = 30.8 bits (68), Expect = 6.0
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 297 AKKKGKKKSKGET---LEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQ 350
AK++ +++ E ++ EKE+ F E K++E+E+L+++ Q N L+ K +
Sbjct: 1037 AKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNVELERKRE 1093
>CSP_PLAFT (P13814) Circumsporozoite protein precursor (CS)
Length = 424
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 172 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 231
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 232 NANPNANPNANPNANP 247
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 220 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 279
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 280 NANPNANPNANPNANP 295
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 180 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 239
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 240 NANPNANPNANPNANP 255
Score = 40.0 bits (92), Expect = 0.010
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 1 MDPTNNQSNTQNSSDY--PFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSN 56
+DP N + N++ P + N PN++P NPN PN +P NPN PN NP N
Sbjct: 129 VDPNANPNVDPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPN 188
Query: 57 FGFASNFN-HPSFVPN---NFNP 75
+N N +P+ PN N NP
Sbjct: 189 ANPNANPNANPNANPNANPNANP 211
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (49%), Gaps = 6/76 (7%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 156 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 215
Query: 64 N-HPSFVPN---NFNP 75
N +P+ PN N NP
Sbjct: 216 NANPNANPNANPNANP 231
Score = 38.9 bits (89), Expect = 0.022
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQ-NPNQFPNQNPQNMSNFGFASNF 63
N + N + P + N PN++P NPN PN +P NPN PN NP N +N
Sbjct: 228 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANP 287
Query: 64 N-HPSFVPN 71
N +P+ PN
Sbjct: 288 NANPNANPN 296
Score = 31.6 bits (70), Expect = 3.5
Identities = 23/70 (32%), Positives = 31/70 (43%), Gaps = 3/70 (4%)
Query: 6 NQSNTQNSSDYPFSYQNQFPNSHPQ-NPNQFPNQHPQNPNQFPNQNPQNMSNFGFASNFN 64
N + N + P + N PN++P NPN PN++ Q Q N N N N N
Sbjct: 268 NANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNGQ--GHNMPNDPNRNVDENAN 325
Query: 65 HPSFVPNNFN 74
+ V NN N
Sbjct: 326 ANNAVKNNNN 335
>Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050
Length = 612
Score = 39.7 bits (91), Expect = 0.013
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 279 RSYEDSVGSSARPMDRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVK 338
R Y + V + + R +KK ++K K E +K E++ + K+ K++E ++ K K
Sbjct: 291 RRYINKVANVVKERQRREMEKKEEEKKKEEEKKKEEEKRKEEKKKKKEEKKEEK-----K 345
Query: 339 QQKNKLLQEKTQAKKMKMYLKLRDEEHLDDRKNELLGKLERE 380
++K + +EK + KK + + + EE +++K E GK RE
Sbjct: 346 KKKEEKKEEKKEEKKEEK-KEEKKEEKKEEKKEEKSGKSLRE 386
Score = 35.8 bits (81), Expect = 0.19
Identities = 21/71 (29%), Positives = 42/71 (58%)
Query: 294 RDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKK 353
++ KKK ++K K E +K E++ + K+ KE++ E+ KE ++++ K ++K + K+
Sbjct: 318 KEEEKKKEEEKRKEEKKKKKEEKKEEKKKKKEEKKEEKKEEKKEEKKEEKKEEKKEEKKE 377
Query: 354 MKMYLKLRDEE 364
K LR+ E
Sbjct: 378 EKSGKSLREGE 388
>YVCE_BACSU (P40767) Hypothetical protein yvcE (PSPA2)
Length = 473
Score = 39.3 bits (90), Expect = 0.017
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 287 SSARPMDRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKEL------TLVKQQ 340
+SA +D K + K+ ++E EKE + +E + + ++LK++ T K +
Sbjct: 28 ASAETLDEKKQKIESKQSEVASSIEAKEKELTELQENQSKIEKELKDINDKALDTSNKIE 87
Query: 341 KNKLLQEKTQAKKMKMYLKLRDEEHLDDRKNELLGKLERELFEN 384
K +KT+ + K+ ++++ E +++NE+L K R L E+
Sbjct: 88 DKKEENDKTKEEIKKLKKEIKETEARIEKRNEILKKRVRSLQES 131
>PDR1_YEAST (P12383) Pleiotropic drug resistance regulatory protein 1
Length = 1063
Score = 39.3 bits (90), Expect = 0.017
Identities = 25/65 (38%), Positives = 34/65 (51%), Gaps = 6/65 (9%)
Query: 3 PTNNQSNTQNSSDYPFSYQNQFPNSHP---QNPNQFPNQHPQNPNQFPNQNPQNMSNFGF 59
PTN Q+N+Q S+ P + Q Q P S N N+ N + N N N N N +NF
Sbjct: 974 PTNGQNNSQVQSNKPINAQQQIPTSVQVPFMNTNEINNNN--NKNNINNINNNNSNNFS- 1030
Query: 60 ASNFN 64
A++FN
Sbjct: 1031 ATSFN 1035
>NEST_RAT (P21263) Nestin
Length = 1805
Score = 39.3 bits (90), Expect = 0.017
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 250 MEEWRALRDQPRYGSQVGGN--------VDSGSSGSKRSYEDSVGSSARPMDRDAAKKKG 301
+E W A +++ ++ G V+ RS E+ + RP+ ++ + G
Sbjct: 647 LESWTAFKEESQHPLGFPGAEDQMLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPLG 706
Query: 302 KKKSKGETLEK-VEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKL 360
++++G+ LE+ +EKE + E+E +Q +L K+ + L E+ + + ++ ++
Sbjct: 707 YEEAEGQILERLIEKESQESLRSPEEE-DQEAGRSLQKENQEPLGYEEAEDQMLERLIEK 765
Query: 361 RDEEHL-DDRKNELLGK-LERE 380
+E L +N+ +GK LERE
Sbjct: 766 ESQESLKSPEENQRIGKPLERE 787
>CAFA_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1
subunit A) (Chromatin assembly factor I p150 subunit)
(CAF-I 150 kDa subunit) (CAF-Ip150)
Length = 938
Score = 38.5 bits (88), Expect = 0.029
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 254 RALRDQPRYGSQVGGNVDSGSSGSKRSYEDSVGSSARPMDRDAAKKKG-----KKKSKGE 308
R RDQ R G Q+ ++R ++ + A+ +A KKK K+K + E
Sbjct: 318 RLQRDQERLGKQL-------KLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERRE 370
Query: 309 TLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKLRDEE 364
EK EKE + + LKE+ ++ +E K ++ + +E+ + ++ + +K E
Sbjct: 371 KREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAE 426
Score = 36.2 bits (82), Expect = 0.14
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 293 DRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAK 352
D++ K+ K +++ E EK+++E + KE +++ E+ KEL ++++ + EK +A+
Sbjct: 322 DQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAE 381
Query: 353 KMKMYLKLRDEEHLDDRKNELLGKLERE 380
K ++ EE +R+ L KLE +
Sbjct: 382 KQRL-----KEERRKERQEALEAKLEEK 404
Score = 32.3 bits (72), Expect = 2.1
Identities = 21/73 (28%), Positives = 41/73 (55%), Gaps = 5/73 (6%)
Query: 299 KKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKEL-TLVKQQKNKLLQEKTQAKKMKMY 357
K+ K++K E +K E+E KELKE+E + +E K +K +L +E+ + ++ +
Sbjct: 343 KEEAKRAKEEAKKKKEEE----KELKEKERREKREKDEKEKAEKQRLKEERRKERQEALE 398
Query: 358 LKLRDEEHLDDRK 370
KL ++ ++ K
Sbjct: 399 AKLEEKRKKEEEK 411
>TRHY_SHEEP (P22793) Trichohyalin
Length = 1549
Score = 38.1 bits (87), Expect = 0.038
Identities = 29/141 (20%), Positives = 65/141 (45%), Gaps = 5/141 (3%)
Query: 234 KAQELYGCGKNVQFTLMEEWRALRDQPRYGSQVGGNVDSGSSGSKRSYEDSVGSSAR--- 290
K QEL + + + R R Q R + GG + R E+ + R
Sbjct: 133 KRQELEELAEEEELREKQVRREQRLQRREQEEYGGEEELQQRPKGRELEELLNREQRFER 192
Query: 291 --PMDRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEK 348
+R + + +++ +GE E+ E+ +Q +E +E + E+L+E +++QK L +
Sbjct: 193 QEQRERQRLQVEQQQRQRGELRERQEEVQLQKRETQELQRERLEEEQQLQKQKRGLEERL 252
Query: 349 TQAKKMKMYLKLRDEEHLDDR 369
+ ++ + L+ +++E + +
Sbjct: 253 LEQERREQELRRKEQERREQQ 273
Score = 33.5 bits (75), Expect = 0.93
Identities = 17/77 (22%), Positives = 44/77 (57%)
Query: 302 KKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKLR 361
+++ + + ++ EK++++ EL+E+E Q +E +Q++ K EK + ++ + +
Sbjct: 549 QRQEREKRRQEREKQYLEKVELQEEEQLQRQERQKRRQEREKQYLEKVELQEEEQLQRQE 608
Query: 362 DEEHLDDRKNELLGKLE 378
E+ +R+ + L K+E
Sbjct: 609 REKRRQERERQYLEKVE 625
Score = 33.1 bits (74), Expect = 1.2
Identities = 23/117 (19%), Positives = 55/117 (46%), Gaps = 20/117 (17%)
Query: 282 EDSVGSSARPMDRDAAKKKGKKKSKGETLEKVE--------------------KEWVQFK 321
E+ + + R+ +K+ +++ + + LEKVE K++++
Sbjct: 425 EERLQREEEQLQREEREKRRRQEREKQYLEKVELWEEEQLQREEREKRRQEREKQYLEKV 484
Query: 322 ELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKLRDEEHLDDRKNELLGKLE 378
EL+E+E Q +E +Q++ + EK + ++ + + E+ +R+ + L K+E
Sbjct: 485 ELREEEQLQRQEREKRRQERERQYLEKVELQEEEQLQREEREKRRQERERQYLEKVE 541
Score = 32.7 bits (73), Expect = 1.6
Identities = 26/99 (26%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 290 RPMDRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNK------ 343
R ++R+ ++ + + E L + E++ +F+E E+++ Q +E L +Q++++
Sbjct: 973 RRLEREQQLRQERDRKFREELSRQERDR-KFRE--EEQLLQEREEQLRRQERDRKFREEE 1029
Query: 344 -LLQEKT-QAKKMKMYLKLRDEEHLDDRKNELLGKLERE 380
LLQE+ Q ++ + K R+EE L + E L + ER+
Sbjct: 1030 QLLQEREEQLRRQERDRKFREEEQLLQEREEQLRRQERD 1068
Score = 32.3 bits (72), Expect = 2.1
Identities = 24/110 (21%), Positives = 54/110 (48%), Gaps = 7/110 (6%)
Query: 278 KRSYEDSVGSSARPMDRDAAKKKGKKKSKGET-----LEKVEKEWVQFKELKEQEIEQLK 332
+R E + + + D +++ K++ + + LE+ + K + EQ++
Sbjct: 332 ERQQEQQISEEVQSLQEDQGRQRLKQEQRYDQNWRWQLEEESQRRRYTLYAKPAQREQVR 391
Query: 333 ELTLVKQQKNKLLQEKTQAKKMKMY--LKLRDEEHLDDRKNELLGKLERE 380
E ++ ++ KL +EK + ++ + Y ++L+ EE R+ E L + ERE
Sbjct: 392 EEEQLRLKEEKLQREKRRQERERQYREVELQREEERLQREEEQLQREERE 441
Score = 31.2 bits (69), Expect = 4.6
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 293 DRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQK--NKLLQEKTQ 350
DR+ ++ ++K E L++ E + K+L ++ E+ + L V+ Q+ +L +EK +
Sbjct: 734 DREKRRQVRERKYLEEELQQEEDRLQREKQLLREDREKRQYLEKVELQREEEQLQREKRR 793
Query: 351 AKKMKMYLK---LRDEEHLDDRKNEL 373
++ + Y + LR+EE L ++ +L
Sbjct: 794 QERERQYREEELLREEERLHRKEQQL 819
Score = 30.4 bits (67), Expect = 7.9
Identities = 17/80 (21%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 302 KKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKLR 361
+++ + + ++ EK++++ EL+E+E Q +E +Q++ + EK + ++ + +
Sbjct: 577 QRQERQKRRQEREKQYLEKVELQEEEQLQRQEREKRRQERERQYLEKVELQEEEQVQRQE 636
Query: 362 DEEHLDDRKNELLGK-LERE 380
E+ +R+ + L K L+R+
Sbjct: 637 REKRRQERERQYLEKELQRQ 656
>ROC_HUMAN (P07910) Heterogeneous nuclear ribonucleoproteins C1/C2
(hnRNP C1 / hnRNP C2)
Length = 306
Score = 38.1 bits (87), Expect = 0.038
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 20/121 (16%)
Query: 260 PRYGSQVGGNVDSGSSGSKRSYEDSVGSSARPMDRDAAKKKGKKKSKGETLEKVEKEWVQ 319
P +V GN S GSS K GK K G+ L+ ++KE Q
Sbjct: 155 PSKRQRVSGNTSRRGKSGFNSKSGQRGSS----------KSGKLK--GDDLQAIKKELTQ 202
Query: 320 FKE--------LKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKLRDEEHLDDRKN 371
K+ L++ E EQ K+ +K K++ Q + KK + +K+ E DD
Sbjct: 203 IKQKVDSLLENLEKMEKEQSKQAVEMKNDKSEEEQSSSSVKKDETNVKMESEGGADDSAE 262
Query: 372 E 372
E
Sbjct: 263 E 263
>RIM_CAEEL (Q22366) Rab-3 interacting molecule unc-10 (Rim)
(Uncoordinated protein 10)
Length = 1563
Score = 38.1 bits (87), Expect = 0.038
Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 28/146 (19%)
Query: 1 MDPTNNQSNTQNSSDYPFSYQNQFPNSHPQNPNQFPNQ-HPQNPNQFPNQNPQNMSNFGF 59
M P +NQ+ Q F N + QN NQ PNQ H QN Q P+QN ++ N
Sbjct: 187 MQPNHNQT------------QQNFMNQN-QNSNQHPNQNHNQNQMQNPHQNQNHVQN--- 230
Query: 60 ASNFNHPSFVPNNFNPYFRSMMGYSSQTPPFNGYMPMVNENFQSVGEYPDFSSQI--NRG 117
NH NN R M Q P +N+ Q+ + + + N+
Sbjct: 231 ----NHQG--ANNHQQNNRRAM---QQQPMSQNQANQINQMNQNQNQQQSHNQNMTQNQR 281
Query: 118 GMTRDNEVAPTPEDTTPKSKRNQQPS 143
T T + T K QQPS
Sbjct: 282 NQTGPQNQQRTNDSRTMKQTPQQQPS 307
Score = 35.8 bits (81), Expect = 0.19
Identities = 45/197 (22%), Positives = 71/197 (35%), Gaps = 44/197 (22%)
Query: 6 NQSNTQNSSDYPFSYQN------QFPNSHPQNPNQFPNQHPQNPNQF-------PNQNPQ 52
NQ++ QN P QN Q N+H QN + Q P + NQ NQN Q
Sbjct: 210 NQNHNQNQMQNPHQNQNHVQNNHQGANNHQQNNRRAMQQQPMSQNQANQINQMNQNQNQQ 269
Query: 53 NMSNFGFASNFNHPSFVPNNFNPYFRSMMGYSSQTPP--FNGYMPMVNENFQSVGEYPDF 110
N N + + N M + Q P + + +++ G+
Sbjct: 270 QSHNQNMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNNVGAAHQHHNQHGQQEQH 329
Query: 111 SSQIN---------------RGGMTRDNEVAPTPEDTTPKSK--------RNQQPSW--- 144
Q+N +GGM P+ E TTP +K NQ+P++
Sbjct: 330 HQQMNEQRTDNNRMRENTNGQGGMFNRQ---PSLEQTTPMNKYNHVEDDGMNQRPTFYTG 386
Query: 145 NTEQNLVLISGWIKYGT 161
N+E + G ++ G+
Sbjct: 387 NSENDQRQFDGQMQQGS 403
>MYSJ_DICDI (P54697) Myosin IJ heavy chain
Length = 2245
Score = 38.1 bits (87), Expect = 0.038
Identities = 37/169 (21%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 228 EDDVFKKAQELYGCGKNVQFTLME---EWRALRDQPRYGSQVGGNVDSGSSGSKRSYEDS 284
E+D F L G N++ ++E E + ++++ Q SG++ K+ E
Sbjct: 1156 EEDYFS----LSGIRDNLERQVLELRDENQLIKERLDSLGQQSSQFQSGAALEKQQLEQL 1211
Query: 285 VGSSARPMDRDAAKKKGKKKSKGETLEKVEKEWVQFK-------ELKEQEIEQLKELTLV 337
V + + + +++K G ++ + + ++E E K +L EQ E++K+L
Sbjct: 1212 VQEQSEQLIKLSSEKLGSEEEAKKQINQLELELTDHKSKLQIQLQLTEQSNEKIKKL--- 1268
Query: 338 KQQKNKLLQEKTQAKKMKMYLKL--RDEEHLDDRKNELLGKLERELFEN 384
K KL + + + K+++ L+ + ++ ++D KN L+ +L FE+
Sbjct: 1269 ---KGKLEEYQDEKKQLQQELERIKQSKQSVEDEKNSLITQLTTVKFES 1314
Score = 31.2 bits (69), Expect = 4.6
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 304 KSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKLRDE 363
K K + K++++ E Q++ QLKE +Q N+L E T+ K L +++
Sbjct: 1652 KEKENEISKLQQQL----ETSNQQLHQLKEELNSMKQSNQL--ESTEQSKQLNQL-IQEN 1704
Query: 364 EHLDDRKNELLGKLERELFEN 384
+ L NE+ +L+ +FEN
Sbjct: 1705 QQLKSVTNEISKQLDDAVFEN 1725
Score = 30.4 bits (67), Expect = 7.9
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 297 AKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKM 356
+K++ KK +G L + K + Q + + L V++QKNK LQEK + + ++
Sbjct: 936 SKREVDKKLRGIILIQARWRMKLAKRVYIQLRAEARSLRTVQEQKNK-LQEKLEELQWRL 994
Query: 357 YLKLRDEEHLDDRK 370
+ + ++ L+D+K
Sbjct: 995 TSEAKRKQQLEDQK 1008
>ITN1_XENLA (O42287) Intersectin 1
Length = 1270
Score = 38.1 bits (87), Expect = 0.038
Identities = 21/95 (22%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 290 RPMDRDAAKKKGKKKSKGETLEKVEKEWVQFKELKEQEIEQLKELTLVKQQKNKLLQEKT 349
R +D K+ K++ E+ ++ ++ +E ++E+E+ ++L + ++ +LL ++
Sbjct: 401 RKRQQDLEKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRN 460
Query: 350 QAKKMKMYLKLRDE------EHLDDRKNELLGKLE 378
+ ++ + LK + + E L+D+K++L GKL+
Sbjct: 461 REQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQ 495
>IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B
(eIF-5B) (Translation initiation factor IF-2)
Length = 1220
Score = 38.1 bits (87), Expect = 0.038
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 27/124 (21%)
Query: 280 SYEDSVGSSARPMDRDAAKKKG-KKKSKG----------------------ETLEKVEKE 316
S E + +A D + KKK KKK KG E L K+++E
Sbjct: 295 SEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEE 354
Query: 317 WVQFKELKEQEIEQLKELTLVKQQKNKLLQEKTQAKKMKMYLKLRDEEHLDDRKNELLGK 376
+ K +E+ I++L+EL ++++ +L QEK + KK K ++ + ++ +LL K
Sbjct: 355 EERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKE----KERKERLKKEGKLLTK 410
Query: 377 LERE 380
+RE
Sbjct: 411 SQRE 414
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.311 0.129 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,933,705
Number of Sequences: 164201
Number of extensions: 2380815
Number of successful extensions: 11060
Number of sequences better than 10.0: 391
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 331
Number of HSP's that attempted gapping in prelim test: 9350
Number of HSP's gapped (non-prelim): 1365
length of query: 384
length of database: 59,974,054
effective HSP length: 112
effective length of query: 272
effective length of database: 41,583,542
effective search space: 11310723424
effective search space used: 11310723424
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC149209.7