BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149209.4 + phase: 0 /pseudo
(205 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 48 2e-05
YIT6_YEAST (P40572) Hypothetical 28.9 kDa protein in SQT1-MET28 ... 32 0.78
CH60_EHRRI (P48214) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 32 1.0
OSTP_MOUSE (P10923) Osteopontin precursor (Bone sialoprotein 1) ... 31 1.7
ASPN_HUMAN (Q9BXN1) Asporin precursor (Periodontal ligament asso... 31 1.7
MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM... 31 2.3
CH60_EHRSE (O32606) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.3
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 30 3.0
MCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor (Mu-... 30 3.0
KEX1_YEAST (P09620) Carboxypeptidase KEX1 precursor (EC 3.4.16.6... 30 3.0
TRBH_ECOLI (P19381) TrbH protein 30 3.9
RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial p... 30 3.9
YU0O_CAEEL (Q19753) Hypothetical protein F23B12.7 in chromosome V 30 5.1
YD17_SCHPO (Q10240) Hypothetical UPF0300 protein C4G9.07 in chro... 30 5.1
ORC1_YEAST (P54784) Origin recognition complex subunit 1 (Origin... 30 5.1
YLK3_CAEEL (P41951) Putative serine/threonine-protein kinase D10... 29 6.6
YAB9_YEAST (P31380) Hypothetical 128.5 kDa helicase in ATS1-TPD3... 29 6.6
SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calciu... 29 6.6
POLB_MAIZE (P15718) Retrovirus-related Pol polyprotein from tran... 29 6.6
DPOL_NPVAC (P18131) DNA polymerase (EC 2.7.7.7) 29 6.6
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 47.8 bits (112), Expect = 2e-05
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PN VTY I C G + K++ M ++ P+ F+A++ G + G+++ A +
Sbjct: 74 PNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENI 133
Query: 91 LEEMKSIGILPDVYGYYVFVNA 112
L M+ GI P Y +NA
Sbjct: 134 LTVMRDAGIEPGPDTYLALLNA 155
>YIT6_YEAST (P40572) Hypothetical 28.9 kDa protein in SQT1-MET28
intergenic region
Length = 265
Score = 32.3 bits (72), Expect = 0.78
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 133 DANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNV 176
DA+R DDDDD+DDD S+S D+S A ++ + S +P V
Sbjct: 85 DASRNDDDDDDEDDD--DSSMSRDLSKALDMSSS---SSSSPRV 123
>CH60_EHRRI (P48214) 60 kDa chaperonin (Protein Cpn60) (groEL
protein) (55 kDa major antigen)
Length = 548
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 141 DDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
DDDD+ G+++ SA +P S+I N +GE +V+TY+
Sbjct: 433 DDDDEQAGINIVKSALKAPISQIVEN---AGEDASVITYN 469
>OSTP_MOUSE (P10923) Osteopontin precursor (Bone sialoprotein 1)
(Secreted phosphoprotein 1) (SPP-1) (Minopontin) (Early
T lymphocyte activation 1 protein) (2AR) (Calcium
oxalate crystal growth inhibitor protein)
Length = 294
Score = 31.2 bits (69), Expect = 1.7
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 10/51 (19%)
Query: 135 NRVGDDDDDDDDDGVSV----SVSADISPASEIFGNIYRSGETPNVVTYST 181
+ + DDDDDDDDDG SV +D S S + S E+ VT ST
Sbjct: 82 DHMDDDDDDDDDDGDHAESEDSVDSDESDES------HHSDESDETVTAST 126
>ASPN_HUMAN (Q9BXN1) Asporin precursor (Periodontal ligament
associated protein-1) (PLAP-1) (UNQ215/PRO241)
Length = 379
Score = 31.2 bits (69), Expect = 1.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 125 NFLLKCLVDANRVGDDDDDDDDD 147
N +LK + D + DDDDDDDDD
Sbjct: 28 NMMLKDMEDTDDDDDDDDDDDDD 50
>MCM1_YEAST (P11746) Pheromone receptor transcription factor
(GRM/PRTF protein)
Length = 286
Score = 30.8 bits (68), Expect = 2.3
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 133 DANRVGDDDDDDDDDG 148
D GDDDDDDDDDG
Sbjct: 103 DEEEDGDDDDDDDDDG 118
>CH60_EHRSE (O32606) 60 kDa chaperonin (Protein Cpn60) (groEL
protein) (55 kDa major antigen)
Length = 548
Score = 30.8 bits (68), Expect = 2.3
Identities = 15/40 (37%), Positives = 26/40 (64%), Gaps = 3/40 (7%)
Query: 141 DDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYS 180
DDDD+ G+++ +A +P S+I N +GE +V+TY+
Sbjct: 433 DDDDEQAGINIVKTALKAPISQIVEN---AGEDASVITYN 469
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 30.4 bits (67), Expect = 3.0
Identities = 19/84 (22%), Positives = 34/84 (39%)
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
D + A IF R P+V Y+ + L +A WKL M + +
Sbjct: 906 DATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYG 965
Query: 73 AIMYGLCQRGELDEASQVLEEMKS 96
++ C+ G+ A ++ EM++
Sbjct: 966 TVINAACRIGDESLAEKLFAEMEN 989
>MCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor
(Mu-protocadherin) (GP100)
Length = 862
Score = 30.4 bits (67), Expect = 3.0
Identities = 15/43 (34%), Positives = 21/43 (47%)
Query: 105 GYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDD 147
GY KD+G E D++ N + A+ G + DDDDD
Sbjct: 802 GYKAVWFGKDIGAEADVVVLNEPTADVDSASASGSEGSDDDDD 844
>KEX1_YEAST (P09620) Carboxypeptidase KEX1 precursor (EC 3.4.16.6)
(Carboxypeptidase D)
Length = 729
Score = 30.4 bits (67), Expect = 3.0
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 133 DANRVGDDDDDDDDD 147
D N GDDDDDDDDD
Sbjct: 561 DHNSEGDDDDDDDDD 575
>TRBH_ECOLI (P19381) TrbH protein
Length = 239
Score = 30.0 bits (66), Expect = 3.9
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 36 YSTYIKGLCKAGSLRVVWKLICNMCRENQPIN--NHCFNAIMYGLCQRGELDEASQVLEE 93
+ +Y+ G+C + S+ + N ++ I + F +Y L Q D S +++
Sbjct: 51 FCSYLAGVCGSSSVVIQNVNAGNKSLDHSEITFRHLAFFCTIYHLHQSDRTDAHSPLVQ- 109
Query: 94 MKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCL 131
+ PD G+ ++ DVGIE + N L C+
Sbjct: 110 ---VKTFPDTGGFVLYRKNADVGIEHKLQHQNDSLSCI 144
>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial
precursor (EC 2.7.7.6) (MtRPOL)
Length = 1230
Score = 30.0 bits (66), Expect = 3.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
+NA+M G ++G E VL +K G+ PD+ Y
Sbjct: 264 YNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY 299
>YU0O_CAEEL (Q19753) Hypothetical protein F23B12.7 in chromosome V
Length = 953
Score = 29.6 bits (65), Expect = 5.1
Identities = 17/43 (39%), Positives = 22/43 (50%), Gaps = 7/43 (16%)
Query: 133 DANRVGDDDDDDDDDG-------VSVSVSADISPASEIFGNIY 168
D + V DDD+DDD+DG ++ AD S EI N Y
Sbjct: 864 DDDEVDDDDEDDDEDGGFGGKSSANIFGDADESSDEEIGANDY 906
>YD17_SCHPO (Q10240) Hypothetical UPF0300 protein C4G9.07 in
chromosome I
Length = 513
Score = 29.6 bits (65), Expect = 5.1
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 25 YRSGETPNVVTYSTYIKGLCKAGSLRVVWKLIC--NMCRENQPINNHCFNAIMYGLC 79
Y E P VV + Y K LC SL V KLI N N + N +YG+C
Sbjct: 121 YPVREIPYVVADTPYNKLLCPLSSLEWVSKLILMDNANSIGMKNNRYSTNPFIYGMC 177
>ORC1_YEAST (P54784) Origin recognition complex subunit 1 (Origin
recognition complex protein 120 kDa subunit)
Length = 914
Score = 29.6 bits (65), Expect = 5.1
Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Query: 129 KCLVDANRVGDD-DDDDDDDGV 149
K L+++N+ DD DDDDD+DGV
Sbjct: 749 KDLIESNKAKDDNDDDDDNDGV 770
>YLK3_CAEEL (P41951) Putative serine/threonine-protein kinase D1044.3
(EC 2.7.1.37)
Length = 1576
Score = 29.3 bits (64), Expect = 6.6
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Query: 35 TYSTYIKGLCKAGSLRVVWKLICNMCRENQP-INNHCFNAIMYGL-CQ 80
T ST + G C+ GS C NQ INN C+N + G CQ
Sbjct: 1391 TGSTNVNGYCQGGSN--------GQCNSNQVLINNQCYNTVSIGFQCQ 1430
>YAB9_YEAST (P31380) Hypothetical 128.5 kDa helicase in ATS1-TPD3
intergenic region
Length = 1131
Score = 29.3 bits (64), Expect = 6.6
Identities = 16/45 (35%), Positives = 24/45 (52%), Gaps = 6/45 (13%)
Query: 104 YGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDG 148
YG V K G++V+ + +D +G+DDDDD+DDG
Sbjct: 377 YGDLVTSQMKKWGVQVEGDNSE------LDLMNLGEDDDDDNDDG 415
>SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich
calcium-binding protein precursor
Length = 699
Score = 29.3 bits (64), Expect = 6.6
Identities = 11/13 (84%), Positives = 12/13 (91%)
Query: 139 DDDDDDDDDGVSV 151
DDDDDDDDD VS+
Sbjct: 252 DDDDDDDDDDVSI 264
>POLB_MAIZE (P15718) Retrovirus-related Pol polyprotein from
transposon element BS1 (ORF 1) [Contains: Protease (EC
3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
Endonuclease]
Length = 740
Score = 29.3 bits (64), Expect = 6.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 72 NAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
N ++ L G +A VLEEM++ G PDV+ Y
Sbjct: 474 NLLVQALFMDGRASDAYVVLEEMQNNGPFPDVFTY 508
>DPOL_NPVAC (P18131) DNA polymerase (EC 2.7.7.7)
Length = 984
Score = 29.3 bits (64), Expect = 6.6
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 129 KCLVDANRVGDDDDDDDDD 147
KC V R DDD+DDDDD
Sbjct: 938 KCSVKRKRDDDDDNDDDDD 956
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,030,487
Number of Sequences: 164201
Number of extensions: 1106745
Number of successful extensions: 5240
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5081
Number of HSP's gapped (non-prelim): 102
length of query: 205
length of database: 59,974,054
effective HSP length: 105
effective length of query: 100
effective length of database: 42,732,949
effective search space: 4273294900
effective search space used: 4273294900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC149209.4