BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149197.4 - phase: 0 
         (204 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AMPN_STRLI (Q11010) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminop...    31  1.7
VME1_CVPRM (P24412) E1 glycoprotein precursor (Matrix glycoprote...    30  3.9
VME1_CVPR8 (P33464) E1 glycoprotein precursor (Matrix glycoprote...    30  3.9
Z228_HUMAN (Q9UJU3) Zinc finger protein 228                            30  5.0

>AMPN_STRLI (Q11010) Aminopeptidase N (EC 3.4.11.2) (Lysyl
           aminopeptidase) (Lys-AP) (Alanine aminopeptidase)
          Length = 857

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 83  SYGNSLFAELCGAMRSIEFAQSKSWNNFWLETDSMLVVQ 121
           ++GN+  ++L GA+        K+W+  WLET  + V++
Sbjct: 417 AFGNTRLSDLLGALEETSGRDLKTWSKAWLETAGINVLR 455


>VME1_CVPRM (P24412) E1 glycoprotein precursor (Matrix glycoprotein)
           (Membrane glycoprotein)
          Length = 262

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 25/93 (26%), Positives = 45/93 (47%), Gaps = 13/93 (13%)

Query: 96  MRSIE-FAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIISNMNFLASHI 154
           +RSI+ + ++KSW +F  ET+++L V A   S ++P +              +  L+ ++
Sbjct: 134 VRSIQLYRRTKSWWSFNPETNAILCVSALGRSYVLPLEGVPTG-------VTLTLLSGNL 186

Query: 155 YREGNSCADVLANIGLTLDTYVYYYSLPLQVRS 187
           Y EG   A      G+T+D    Y  + L  R+
Sbjct: 187 YAEGFKIAG-----GMTIDNLPKYVMVALPSRT 214


>VME1_CVPR8 (P33464) E1 glycoprotein precursor (Matrix glycoprotein)
           (Membrane glycoprotein)
          Length = 262

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 25/93 (26%), Positives = 45/93 (47%), Gaps = 13/93 (13%)

Query: 96  MRSIE-FAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQVRNRWNNCQIIISNMNFLASHI 154
           +RSI+ + ++KSW +F  ET+++L V A   S ++P +              +  L+ ++
Sbjct: 134 VRSIQLYRRTKSWWSFNPETNAILCVSALGRSYVLPLEGVPTG-------VTLTLLSGNL 186

Query: 155 YREGNSCADVLANIGLTLDTYVYYYSLPLQVRS 187
           Y EG   A      G+T+D    Y  + L  R+
Sbjct: 187 YAEGFKIAG-----GMTIDNLPKYVMVALPSRT 214


>Z228_HUMAN (Q9UJU3) Zinc finger protein 228
          Length = 913

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 140 CQIIISNMNFLASHIYREGNSCADVLANIGLTLDTYVYYYSLPLQVRSDYVKNRLGWPSF 199
           CQ  +       S +  +GNS     A I + +     Y    +   S+Y+K++ G+PS+
Sbjct: 119 CQDFLKVFQGKNSQLQEQGNSLGQAWAGIPVQISEDKNYIFTHIGNGSNYIKSQ-GYPSW 177

Query: 200 RFNHS 204
           R +HS
Sbjct: 178 RAHHS 182


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.323    0.135    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,155,331
Number of Sequences: 164201
Number of extensions: 869801
Number of successful extensions: 1689
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1688
Number of HSP's gapped (non-prelim): 4
length of query: 204
length of database: 59,974,054
effective HSP length: 105
effective length of query: 99
effective length of database: 42,732,949
effective search space: 4230561951
effective search space used: 4230561951
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)