BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149131.10 - phase: 0 /pseudo
(188 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FXLH_MOUSE (Q9QZN1) F-box/LRR-repeat protein 17 (F-box and leuci... 36 0.046
YAD7_YEAST (P39728) Hypothetical 30.5 kDa protein in PYK1-SNC1 i... 32 0.66
OXA1_STRA3 (Q8E6W4) Membrane protein oxaA 1 precursor 31 1.5
FXLL_HUMAN (Q9UKT6) F-box/LRR-repeat protein 21 (F-box and leuci... 30 2.5
OXA1_STRA5 (Q8CX16) Membrane protein oxaA 1 precursor 30 3.3
FXLL_MOUSE (Q8BFZ4) F-box/LRR-repeat protein 21 (F-box and leuci... 30 4.3
LUXE_VIBHA (P14286) Long-chain-fatty-acid--luciferin-component l... 29 5.6
FXLC_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuci... 29 5.6
YJ9H_YEAST (P47171) Hypothetical 191.7 kDa protein in HOM6-PMT4 ... 29 7.3
G92A_DROME (Q8IN58) Putative gustatory receptor 92a 29 7.3
FX42_MOUSE (Q6PDJ6) F-box only protein 42 28 9.6
FX42_HUMAN (Q6P3S6) F-box only protein 42 28 9.6
>FXLH_MOUSE (Q9QZN1) F-box/LRR-repeat protein 17 (F-box and
leucine-rich repeat protein 17) (F-box only protein 13)
(Fragment)
Length = 462
Score = 36.2 bits (82), Expect = 0.046
Identities = 25/79 (31%), Positives = 35/79 (43%), Gaps = 6/79 (7%)
Query: 13 PPAVDKINSLPDEILSQILSLIPV-EEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDS 71
PP + IN LP IL +I S + + E + S++ K W L C+DF D S
Sbjct: 76 PPEIPDINQLPPSILLKIFSNLSLNERCLSASLVCKYWRDL-----CLDFQFWKQLDLSS 130
Query: 72 TYSFNDSMSSILLSRYHNI 90
D + + SR NI
Sbjct: 131 RQQVTDELLEKIASRSQNI 149
>YAD7_YEAST (P39728) Hypothetical 30.5 kDa protein in PYK1-SNC1
intergenic region
Length = 267
Score = 32.3 bits (72), Expect = 0.66
Identities = 29/114 (25%), Positives = 54/114 (46%), Gaps = 11/114 (9%)
Query: 5 RRISEAATPPAVDKINSLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDI 64
++I + T D I SLP S +LS P+ + A + L L F F +I
Sbjct: 111 KKIKTSLTQAQTDTIQSLPQFCNSNVLSGEPLVQYQAFNDL------LALFKSFSHFGNI 164
Query: 65 ILNDTDSTYSFNDSMSSILLSRYHNINKWINFVVQHGLKYLRLGLHISVEDDDD 118
++ S++S++ ++ L+SR + +Q L+Y++ L+IS+ D+
Sbjct: 165 LV---ISSHSYDCALLKFLISRVMTYYPLV--TIQDSLQYMKATLNISISTSDE 213
>OXA1_STRA3 (Q8E6W4) Membrane protein oxaA 1 precursor
Length = 271
Score = 31.2 bits (69), Expect = 1.5
Identities = 31/131 (23%), Positives = 53/131 (39%), Gaps = 27/131 (20%)
Query: 68 DTDSTYSFNDSMSSIL----LSRYHNINK--------WINFVVQHGLKYLRLGLHISVED 115
D DS ND M S+ ++ Y ++ W F + +L++G +S+E
Sbjct: 101 DPDSRLKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSLEL 160
Query: 116 DDDDAYVDIPILPV------SILTCRTLVSLDLWRVL-------IFLLLGLDFHHSMPFI 162
D Y +P+L + LT + V ++ L I L+ +F +
Sbjct: 161 SQPDPYYILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPFIILVTSFNFASGVVLY 220
Query: 163 WTIRSSNTFQI 173
WT+ SN FQ+
Sbjct: 221 WTV--SNAFQV 229
>FXLL_HUMAN (Q9UKT6) F-box/LRR-repeat protein 21 (F-box and
leucine-rich repeat protein 21) (F-box/LRR-repeat
protein 3B) (F-box and leucine-rich repeat protein 3B)
Length = 434
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 21 SLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTYSFNDSMS 80
SLP ++ QI +P+ + A S + +RW ++ +D + LN + +T SF +
Sbjct: 44 SLPHHVVLQIFQYLPLLDRACASSVCRRWNEVFHISDLWRKFEFELNQS-ATSSFKSTHP 102
Query: 81 SIL 83
++
Sbjct: 103 DLI 105
>OXA1_STRA5 (Q8CX16) Membrane protein oxaA 1 precursor
Length = 271
Score = 30.0 bits (66), Expect = 3.3
Identities = 30/131 (22%), Positives = 53/131 (39%), Gaps = 27/131 (20%)
Query: 68 DTDSTYSFNDSMSSIL----LSRYHNINK--------WINFVVQHGLKYLRLGLHISVED 115
D D+ ND M S+ ++ Y ++ W F + +L++G +S+E
Sbjct: 101 DPDNRLKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLSLEL 160
Query: 116 DDDDAYVDIPILPV------SILTCRTLVSLDLWRVL-------IFLLLGLDFHHSMPFI 162
D Y +P+L + LT + V ++ L I L+ +F +
Sbjct: 161 SQPDPYYILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPFIILVTSFNFASGVVLY 220
Query: 163 WTIRSSNTFQI 173
WT+ SN FQ+
Sbjct: 221 WTV--SNAFQV 229
>FXLL_MOUSE (Q8BFZ4) F-box/LRR-repeat protein 21 (F-box and
leucine-rich repeat protein 21) (F-box/LRR-repeat
protein 3B) (F-box and leucine-rich repeat protein 3B)
Length = 434
Score = 29.6 bits (65), Expect = 4.3
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 21 SLPDEILSQILSLIPVEEAAATSILSKRWTHLWKFTDCIDFTDIILNDTDSTY 73
+LP ++ QI +P+ + A S + +RW ++ D + LN + ++Y
Sbjct: 44 TLPHHVILQIFQYLPLIDRARASSVCRRWNEVFHIPDLWRKFEFELNQSATSY 96
>LUXE_VIBHA (P14286) Long-chain-fatty-acid--luciferin-component
ligase (EC 6.2.1.19) (Acyl-protein synthetase)
Length = 378
Score = 29.3 bits (64), Expect = 5.6
Identities = 26/89 (29%), Positives = 41/89 (45%), Gaps = 19/89 (21%)
Query: 60 DFTDIILNDTDSTYSFNDS--MSSILLS-----RYHNINKWINFVVQHGLKYLRLGLHIS 112
+ D+I T +S + ++S L+ YHN + + F RLG+
Sbjct: 17 EIDDLIFMGTPQQWSLQEQKQLTSRLVKGAYQYHYHNNDDYRQFCE-------RLGVGEV 69
Query: 113 VEDDDDDAYVDIPILPVSILTCRTLVSLD 141
VED +D IP+ P SI +TL++LD
Sbjct: 70 VEDLND-----IPVFPTSIFKLKTLLTLD 93
>FXLC_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and
leucine-rich repeat protein 12) (F-box protein FBL12)
Length = 326
Score = 29.3 bits (64), Expect = 5.6
Identities = 15/47 (31%), Positives = 22/47 (45%), Gaps = 6/47 (12%)
Query: 22 LPDEILSQILSLIPVEEAAATSILSKRWTH------LWKFTDCIDFT 62
LPD +L +I S +PV + S + RW LW+ D +T
Sbjct: 7 LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTLYT 53
>YJ9H_YEAST (P47171) Hypothetical 191.7 kDa protein in HOM6-PMT4
intergenic region
Length = 1648
Score = 28.9 bits (63), Expect = 7.3
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 48 RWTHLWKFTDCIDFTDIILNDT----DSTYSFNDSMSSILLSRYHNINKWINFVVQHGLK 103
+WTH D D L++T ++T +DS I Y +I VQ +
Sbjct: 630 QWTHYCFLQYTCDIVDSRLSETLTSLENTIKDSDSSLDIAYPNYRHIPALNLNTVQSQKR 689
Query: 104 YLRLGLHISVEDDDDDAYVD 123
+R+ +I+VED +D D
Sbjct: 690 KIRIIQNITVEDISEDTNSD 709
>G92A_DROME (Q8IN58) Putative gustatory receptor 92a
Length = 386
Score = 28.9 bits (63), Expect = 7.3
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 144 RVLIFLLLGL-DFHHSMPFIW-TIRSSNTFQILCCFWLDVRILS 185
R LI +LL L F H ++W TIR +++ L +W D ++S
Sbjct: 139 RELILILLNLISFAHEQTYLWFTIRKGFSWRFLIDWWCDFYLVS 182
>FX42_MOUSE (Q6PDJ6) F-box only protein 42
Length = 717
Score = 28.5 bits (62), Expect = 9.6
Identities = 14/37 (37%), Positives = 23/37 (61%), Gaps = 1/37 (2%)
Query: 19 INSLPDEILSQILS-LIPVEEAAATSILSKRWTHLWK 54
++ LP+E+L ILS L P +E +++ K+W L K
Sbjct: 47 MSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIK 83
>FX42_HUMAN (Q6P3S6) F-box only protein 42
Length = 717
Score = 28.5 bits (62), Expect = 9.6
Identities = 14/37 (37%), Positives = 23/37 (61%), Gaps = 1/37 (2%)
Query: 19 INSLPDEILSQILS-LIPVEEAAATSILSKRWTHLWK 54
++ LP+E+L ILS L P +E +++ K+W L K
Sbjct: 47 MSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIK 83
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.327 0.141 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,003,002
Number of Sequences: 164201
Number of extensions: 862980
Number of successful extensions: 2595
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2592
Number of HSP's gapped (non-prelim): 12
length of query: 188
length of database: 59,974,054
effective HSP length: 104
effective length of query: 84
effective length of database: 42,897,150
effective search space: 3603360600
effective search space used: 3603360600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC149131.10