Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149130.7 - phase: 0 /pseudo
         (359 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ISPH_BRUME (Q8YFR1) 4-hydroxy-3-methylbut-2-enyl diphosphate red...    35  0.38
ADVL_HUMAN (O75366) Advillin (p92)                                     34  0.50
ISPH_BRUSU (Q8G257) 4-hydroxy-3-methylbut-2-enyl diphosphate red...    33  0.85
KC1_EIMTE (Q6QNL9) Casein kinase I (EC 2.7.1.-)                        32  3.2
C9CA_BACTO (Q45733) Pesticidial crystal protein cry9Ca (Insectic...    31  5.5
YS44_CAEEL (Q09372) Hypothetical protein ZK177.4 in chromosome II      30  7.2
YI73_AQUAE (O67720) Hypothetical protein AQ_1873                       30  7.2
NLEX_HUMAN (Q9H9L3) Probable nucleolar exonuclease (EC 3.1.-.-)        30  9.4
NFHT_CAEEL (O76463) Nitrilase and fragile histidine triad fusion...    30  9.4
F16P_ARATH (P25851) Fructose-1,6-bisphosphatase, chloroplast pre...    30  9.4

>ISPH_BRUME (Q8YFR1) 4-hydroxy-3-methylbut-2-enyl diphosphate
           reductase (EC 1.17.1.2)
          Length = 346

 Score = 34.7 bits (78), Expect = 0.38
 Identities = 21/89 (23%), Positives = 43/89 (47%), Gaps = 1/89 (1%)

Query: 81  VSVYIERGITLDMPQNPKIAFMFLTPGSLPFEKLWDNFFQGHEGKFSVYVHASKAKPVHV 140
           +S+ ++R   ++  Q   I+ + L+ G+   E + D      + +F V +  ++   V  
Sbjct: 250 MSMLVQRAEDIEWEQIGDISVVGLSAGASAPEIIVDEIIDAFKARFDVKIELAETT-VET 308

Query: 141 SRYFVNRDIRSDQLVWGKMSIVEAERRLL 169
             + VNR+IR  +L    M+ V  E R++
Sbjct: 309 ENFLVNREIRDVELTVKDMAFVNGEHRVV 337


>ADVL_HUMAN (O75366) Advillin (p92)
          Length = 819

 Score = 34.3 bits (77), Expect = 0.50
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 109 LPFEKLWDNFFQGHEGKFSVYVHASKAKPVHVSRYFVNRDIRSDQLVWGKMSIVEAERRL 168
           +P E  W  FF G +    +Y +    KP H+   + +R    D+L       VE +R+ 
Sbjct: 408 VPVEYQWYGFFYGGDCYLVLYTYEVNGKPHHILYIWQDRHASQDELAASAYQAVEVDRQF 467

Query: 169 LANALQ 174
              A+Q
Sbjct: 468 DGAAVQ 473


>ISPH_BRUSU (Q8G257) 4-hydroxy-3-methylbut-2-enyl diphosphate
           reductase (EC 1.17.1.2)
          Length = 346

 Score = 33.5 bits (75), Expect = 0.85
 Identities = 21/89 (23%), Positives = 42/89 (46%), Gaps = 1/89 (1%)

Query: 81  VSVYIERGITLDMPQNPKIAFMFLTPGSLPFEKLWDNFFQGHEGKFSVYVHASKAKPVHV 140
           +S+ ++R   ++  Q   I+ + L+ G+   E + D      +  F V +  ++   V  
Sbjct: 250 MSMLVQRAEDIEWEQIGDISVVGLSAGASAPEIIVDEIIDAFKAHFDVKIELAETT-VET 308

Query: 141 SRYFVNRDIRSDQLVWGKMSIVEAERRLL 169
             + VNR+IR  +L    M+ V  E R++
Sbjct: 309 ENFLVNREIRDVELTVKDMAFVNGEHRVV 337


>KC1_EIMTE (Q6QNL9) Casein kinase I (EC 2.7.1.-)
          Length = 335

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 141 SRYFVNRDIRSDQLVWG---KMSIVEAERRLLANALQDPNNQHFV 182
           SR+F++RDI+ D  + G   KMSIV A    LA   +DP  Q  +
Sbjct: 121 SRHFIHRDIKPDNFLIGRGKKMSIVFAIDFGLAKKYRDPRTQSHI 165


>C9CA_BACTO (Q45733) Pesticidial crystal protein cry9Ca
           (Insecticidal delta-endotoxin CryIXC(a)) (Crystaline
           entomocidal protoxin) (130 kDa crystal protein)
          Length = 1157

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 181 FVLLSDSCVPLYNFNYIFDYLMYTDKSFVDSFRDPGPVGNGR 222
           + L SD    L N NY  DYL  TD+ + DS+ +P    +GR
Sbjct: 27  YPLASDPNAALQNMNYK-DYLQMTDEDYTDSYINPSLSISGR 67


>YS44_CAEEL (Q09372) Hypothetical protein ZK177.4 in chromosome II
          Length = 655

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 45/229 (19%), Positives = 83/229 (35%), Gaps = 40/229 (17%)

Query: 152 DQLVWGKMSIVEAERRLLANALQDPNNQHFVLLSDSCVPLYNFNYIFDYLMYT--DKSFV 209
           D L+   +S+   + RLL     +      VL SD+C+  YN    FD L+     ++ +
Sbjct: 115 DSLLLQNISLSVVKVRLLPEKCDEKTFVTAVLFSDNCIRFYNLQKKFDSLLLAVDFRNHL 174

Query: 210 DSFRDPGPVGNGRYSEHMLPEVEIKDFRTGAQWFSLKRQHAVKVMADHLYYSKFQAQCEQ 269
               D     N    +  L   ++   +     FS+     + + +D  +Y+ F      
Sbjct: 175 HQVHDENVANNTFGLQKALVSFDLIPPKPNTSHFSI-----ISIDSDCDFYTSF---VHF 226

Query: 270 SC--------------VDGKNC-ILDEHYLPT-------FFTIVDPNGIAKWSVTYVDR- 306
           SC              VDG  C  LD  Y+ T        F +V   G+    V + +  
Sbjct: 227 SCFKEGYAPRIHRIEPVDGLPCDPLDLRYIQTTNPRICSVFVLVSGGGVLSHLVVFPNEF 286

Query: 307 -------SEQKRHPKSYRTQDITYELLKNIKLHNFHLFLTERSTKMDLF 348
                   +Q R P S     I    ++++K+  + +  +     +++F
Sbjct: 287 GEFRFLVKDQLRLPSSNGDPRIVQNQIRSLKVSRYEIATSSSLFSVNIF 335


>YI73_AQUAE (O67720) Hypothetical protein AQ_1873
          Length = 407

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 23/81 (28%), Positives = 39/81 (47%), Gaps = 8/81 (9%)

Query: 112 EKLWDNFFQGHEGKFSVYVHASKAKPVHVSRYFVNRDIRSDQLVWGKMSIVEAERRLLAN 171
           +KL DN     +GKFSV V       V   +    + + +D +V+  +S   AE+ L+  
Sbjct: 159 KKLTDNITNALKGKFSVEV-------VRNIKSVKEKGLEADIIVYDAISGSIAEKNLMEL 211

Query: 172 A-LQDPNNQHFVLLSDSCVPL 191
           A +     +HF++L D   P+
Sbjct: 212 AEVPQLREKHFIILVDELFPI 232


>NLEX_HUMAN (Q9H9L3) Probable nucleolar exonuclease (EC 3.1.-.-)
          Length = 353

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 219 GNGRYSEHMLPEVEIKDFRTGAQWFSLKRQHAV 251
           G+  Y E++LP   I D+RT  +W  +++QH V
Sbjct: 208 GDVLYDEYILPPCHIVDYRT--RWSGIRKQHMV 238


>NFHT_CAEEL (O76463) Nitrilase and fragile histidine triad fusion
           protein NitFhit [Includes:
           Bis(5'-adenosyl)-triphosphatase (EC 3.6.1.29)
           (Diadenosine 5',5'''-P1,P3-triphosphate hydrolase)
           (Dinucleosidetriphosphatase) (AP3A hydrolase) (AP3AASE);
           Nitrilas
          Length = 440

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 18/57 (31%), Positives = 28/57 (48%), Gaps = 5/57 (8%)

Query: 205 DKSFVDSFRDPGPVGNGRYSEHMLPEVEIKDFRTGAQWFSLKRQHAVKVMADHLYYS 261
           D S+VD+ R+  PV + R S+     +  K   TG   F+        + ADH++YS
Sbjct: 263 DLSYVDTLREMQPVFSHRRSDLYTLHINEKSSETGGLKFA-----RFNIPADHIFYS 314


>F16P_ARATH (P25851) Fructose-1,6-bisphosphatase, chloroplast
           precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate
           1-phosphohydrolase) (FBPase)
          Length = 417

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 8/52 (15%)

Query: 175 DPNNQHFVLLSDSC-VP----LYNFNYIFDYLMYTDK--SFVDSFRDPGPVG 219
           DP    FVL  ++  +P    +Y+FN   +Y M+ DK   ++D  +DPGP G
Sbjct: 272 DPMYGEFVLTQENIEIPKAGRIYSFNE-GNYQMWDDKLKKYIDDLKDPGPTG 322


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.325    0.139    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,233,274
Number of Sequences: 164201
Number of extensions: 1892429
Number of successful extensions: 4800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4799
Number of HSP's gapped (non-prelim): 10
length of query: 359
length of database: 59,974,054
effective HSP length: 111
effective length of query: 248
effective length of database: 41,747,743
effective search space: 10353440264
effective search space used: 10353440264
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)


Medicago: description of AC149130.7