
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149130.3 - phase: 0 /pseudo
(171 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y243_BUCBP (Q89AM4) Hypothetical UPF0274 protein bbp243 33 0.42
>Y243_BUCBP (Q89AM4) Hypothetical UPF0274 protein bbp243
Length = 217
Score = 32.7 bits (73), Expect = 0.42
Identities = 18/68 (26%), Positives = 37/68 (53%), Gaps = 6/68 (8%)
Query: 88 KLFTLVKSCFTSHLRYSNPIGYSSDGSKVLFEGIEVLLDVHYKKLFWYDLKSERVS--YV 145
K+ + + T R N I Y + +LF+ + +L+ H +++ YDL ++R++ Y+
Sbjct: 86 KMIRYIFNLITLENRLENNIKYKN----ILFKELSILIQQHKNRVYTYDLLADRLAQIYL 141
Query: 146 EGIPKLFF 153
+ + KL F
Sbjct: 142 DTVSKLGF 149
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.326 0.143 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,233,461
Number of Sequences: 164201
Number of extensions: 821267
Number of successful extensions: 2479
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2479
Number of HSP's gapped (non-prelim): 1
length of query: 171
length of database: 59,974,054
effective HSP length: 102
effective length of query: 69
effective length of database: 43,225,552
effective search space: 2982563088
effective search space used: 2982563088
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Medicago: description of AC149130.3