BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149129.2 + phase: 0 
         (261 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ELM3_HUMAN (Q96BJ8) Engulfment and cell motility protein 3             38  0.028
ELM3_MOUSE (Q8BYZ7) Engulfment and cell motility protein 3             37  0.048
YQL3_CAEEL (Q09292) Hypothetical protein C56G7.3 in chromosome III     32  1.5
U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein ...    31  3.5
S141_HUMAN (Q92503) SEC14-like protein 1                               31  3.5
EFG2_VIBPA (Q87M30) Elongation factor G 2 (EF-G 2)                     30  4.5
APA1_PIG (P18648) Apolipoprotein A-I precursor (Apo-AI)                30  4.5
SYE_TOBAC (Q43794) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta...    30  7.7
PURL_PYRAE (Q8ZZJ7) Phosphoribosylformylglycinamidine synthase I...    30  7.7

>ELM3_HUMAN (Q96BJ8) Engulfment and cell motility protein 3
          Length = 607

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 24/122 (19%)

Query: 72  LQSRIDVPYDSSIPEHQASLRALWNAAFPEE-ELNG----------LISEQWKDMGWQGK 120
           L+ R+  P D    E +  L+ L  AAF  E E +G          L + +++ +G+   
Sbjct: 180 LEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFSNS 239

Query: 121 DPSTDFRG--GGYISLENLLFFARNFP-------IFCGSRKEIVQC----GSTRLRLLVL 167
           +P+ D      G ++L+N+L+F+RN P       +   SR++  +C    GS +L +L+ 
Sbjct: 240 NPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLC 299

Query: 168 TL 169
            L
Sbjct: 300 EL 301


>ELM3_MOUSE (Q8BYZ7) Engulfment and cell motility protein 3
          Length = 607

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 26/87 (29%), Positives = 44/87 (49%), Gaps = 13/87 (14%)

Query: 72  LQSRIDVPYDSSIPEHQASLRALWNAAF-PEEELNG----------LISEQWKDMGWQGK 120
           L+ R+  P D    E +  L+AL  AAF PE E  G          L   +++ +G+   
Sbjct: 180 LEPRMRTPLDPYSQEQRDQLQALRQAAFEPEGESLGTGLSADRRRSLCVREFRKLGFSNS 239

Query: 121 DPSTDFRG--GGYISLENLLFFARNFP 145
           +P+ D      G ++L+N+L+F+R+ P
Sbjct: 240 NPAQDLERVPPGLLALDNMLYFSRHAP 266


>YQL3_CAEEL (Q09292) Hypothetical protein C56G7.3 in chromosome III
          Length = 322

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 22/78 (28%), Positives = 32/78 (40%), Gaps = 2/78 (2%)

Query: 108 ISEQWKDMGWQGKDPSTDFRGGGYISLENLLFFARNFPIFCGSRKEIVQCGSTRLRLLVL 167
           +   W  +G+Q   P TDFRG G + L  +  F +  P      + IV   +T      L
Sbjct: 172 VGAHWVTVGFQSATPHTDFRGCGVLGLLQMHTFTQRVP--ANLLRAIVLLATTEPNDFPL 229

Query: 168 TLHSCLFKC*ILKQLSHG 185
            + S      +L QL  G
Sbjct: 230 AVVSINITSILLTQLKKG 247


>U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein 200
            kDa helicase (EC 3.6.1.-)
          Length = 2142

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/38 (36%), Positives = 20/38 (51%)

Query: 69   LQRLQSRIDVPYDSSIPEHQASLRALWNAAFPEEELNG 106
            LQ+L  R+ +P   SI EH A +  L  A   + +L G
Sbjct: 1037 LQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEG 1074


>S141_HUMAN (Q92503) SEC14-like protein 1
          Length = 715

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/35 (42%), Positives = 20/35 (56%)

Query: 60  DLTPYQEECLQRLQSRIDVPYDSSIPEHQASLRAL 94
           DLTP QE CL RL+  +   +   IP+ +  LR L
Sbjct: 250 DLTPLQESCLIRLRQWLQETHKGKIPKDEHILRFL 284


>EFG2_VIBPA (Q87M30) Elongation factor G 2 (EF-G 2)
          Length = 696

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 15/120 (12%)

Query: 1   MDDRGGSFVAVRRISQGLDRGNAYHSSSAEFVTGSTAWIGRGLSCVCAQRRESDARLSFD 60
           MDDR G+   +R  S  + +G+   +S+    TG T  IGR +     +R E D+  + D
Sbjct: 317 MDDRFGALTFIRIYSGKMKKGDTVLNSA----TGKTERIGRMVEMHADERNEIDSAQAGD 372

Query: 61  LTPYQEECLQRLQSRIDVPYDSSIPEHQASLRALWNAAFPEEELNGLISEQWKDMGWQGK 120
           +              +   +    P+H+ +L  +    FPE  ++  I+ + KD G   K
Sbjct: 373 IIAVVG------MKNVQTGHTLCDPKHECTLEPM---IFPEPVIS--IAVKPKDKGGSEK 421


>APA1_PIG (P18648) Apolipoprotein A-I precursor (Apo-AI)
          Length = 265

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 26/94 (27%), Positives = 37/94 (38%), Gaps = 7/94 (7%)

Query: 51  RESDARLSFDLTPYQEECLQRLQSRIDV------PYDSSIPEHQAS-LRALWNAAFPEEE 103
           R+    L   L+P  EE   RL++ ++       PY   + +  A+   AL        E
Sbjct: 154 RQKVQELQEKLSPLAEELRDRLRAHVEALRQHVAPYSDDLRQRMAARFEALKEGGGSLAE 213

Query: 104 LNGLISEQWKDMGWQGKDPSTDFRGGGYISLENL 137
                 EQ K +G + K    D R G    LENL
Sbjct: 214 YQAKAQEQLKALGEKAKPALEDLRQGLLPVLENL 247


>SYE_TOBAC (Q43794) Glutamyl-tRNA synthetase (EC 6.1.1.17)
           (Glutamate--tRNA ligase) (GluRS)
          Length = 569

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 11/19 (57%), Positives = 14/19 (72%)

Query: 98  AFPEEELNGLISEQWKDMG 116
           + P EELN +I E+WKD G
Sbjct: 380 SLPSEELNRIIGERWKDAG 398


>PURL_PYRAE (Q8ZZJ7) Phosphoribosylformylglycinamidine synthase II
           (EC 6.3.5.3) (FGAM synthase II)
          Length = 697

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 52  ESDARLSFDLTPYQEECLQRLQSRIDVPY 80
           E+  R+ F  +P + ECL+RL  + +VPY
Sbjct: 294 ETQERMVFVTSPSKLECLERLLEKFEVPY 322


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.337    0.145    0.501 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,032,535
Number of Sequences: 164201
Number of extensions: 1152766
Number of successful extensions: 3041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3034
Number of HSP's gapped (non-prelim): 9
length of query: 261
length of database: 59,974,054
effective HSP length: 108
effective length of query: 153
effective length of database: 42,240,346
effective search space: 6462772938
effective search space used: 6462772938
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 65 (29.6 bits)