BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149129.11 - phase: 0 /pseudo
(234 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP74_CAEEL (Q09221) Hypothetical protein B0228.4 in chromosome II 153 4e-37
CNE8_MOUSE (Q9DC53) Copine VIII 76 8e-14
CNE8_HUMAN (Q86YQ8) Copine VIII 75 1e-13
CNE5_MOUSE (Q8JZW4) Copine V 73 5e-13
CNE5_HUMAN (Q9HCH3) Copine V 73 5e-13
CNE1_MOUSE (Q8C166) Copine I 71 2e-12
CNE2_MOUSE (P59108) Copine II 70 4e-12
CNE4_HUMAN (Q96A23) Copine IV (Copine 8) 69 1e-11
CNE3_MOUSE (Q8BT60) Copine III 69 1e-11
CNE2_HUMAN (Q96FN4) Copine II 68 2e-11
CNE3_HUMAN (O75131) Copine III 67 4e-11
CNE7_HUMAN (Q9UBL6) Copine VII 65 1e-10
CNE1_HUMAN (Q99829) Copine I 65 1e-10
CNE6_MOUSE (Q9Z140) Copine VI (Neuronal-copine) (N-copine) 63 7e-10
CNE6_HUMAN (O95741) Copine VI (Neuronal-copine) (N-copine) 63 7e-10
YGJI_CAEEL (Q9XUB9) Hypothetical protein T28F3.1 in chromosome IV 57 5e-08
YP6A_CAEEL (Q09219) Hypothetical protein B0495.10 in chromosome II 52 9e-07
SYC_HAEDU (Q7VMA0) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst... 33 0.76
GPMI_RHOBA (Q7UFG7) 2,3-bisphosphoglycerate-independent phosphog... 33 0.76
SYC_YERPE (Q8ZCC0) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst... 32 1.7
>YP74_CAEEL (Q09221) Hypothetical protein B0228.4 in chromosome II
Length = 1633
Score = 153 bits (386), Expect = 4e-37
Identities = 94/229 (41%), Positives = 133/229 (58%), Gaps = 23/229 (10%)
Query: 5 GKYSLIRQSLHDIRNVP-NSCEKAISIIGKKFSPFLDDNLIPCFGFGDASTSDHDVFSF- 62
G+ + ++ LH I N ++ I I+GK S F D IP +GFGD +DH +F+
Sbjct: 1418 GERTFDKRPLHTIDPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIA 1477
Query: 63 --YRDERFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIVDQSGGKHHVLVIISD 120
Y E+ CNG EE+L Y E+ P I+ +G T+F P+I+ A +I + +H+LVI++D
Sbjct: 1478 ERYDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNFVPLIDRAIEICKEKHS-YHILVIVAD 1536
Query: 121 GQVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQDNIKMQTR 180
GQV +++K++ AI A +PLSII+VGVGDGPW+M+ F DNI R
Sbjct: 1537 GQV-----------TNEKINQ-KAIAAASHYPLSIIMVGVGDGPWNMMGRFDDNI--PKR 1582
Query: 181 TFHNFKFVNFTEIMSKSNNISPSLKEAEILLAIREILFQYKAAKELGLL 229
F NF FV+F ++M + N S L A+ EI QYKA KELGLL
Sbjct: 1583 LFDNFHFVDFHKVMFNAPNADASF----ALNALMEIPDQYKAIKELGLL 1627
>CNE8_MOUSE (Q9DC53) Copine VIII
Length = 564
Score = 75.9 bits (185), Expect = 8e-14
Identities = 56/217 (25%), Positives = 100/217 (45%), Gaps = 26/217 (11%)
Query: 22 NSCEKAISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDERFCNGHEEIL 76
N+ A+ +G+ + D + P GFG D S + +C+G E ++
Sbjct: 338 NAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVM 397
Query: 77 SRYREIRPNIQPAGTTSFAPIIEMATKIVD--QSGGKHHVLVIISDGQVIRRNDAQHGSL 134
Y ++Q G T+FAP+I + + G ++ VL+I++DG +
Sbjct: 398 EAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVI----------- 446
Query: 135 SSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQ-DNIKMQTRTFHN----FKFVN 189
S T ++IV A K P+SII+VGVG +D + E D++++ +R + +FV
Sbjct: 447 -SDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSRGKYAERDIVQFVP 505
Query: 190 FTEIMSKSNN--ISPSLKEAEILLAIREILFQYKAAK 224
F + + +S N +S + ++L I E Y A+
Sbjct: 506 FRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYMRAR 542
>CNE8_HUMAN (Q86YQ8) Copine VIII
Length = 564
Score = 75.5 bits (184), Expect = 1e-13
Identities = 56/217 (25%), Positives = 100/217 (45%), Gaps = 26/217 (11%)
Query: 22 NSCEKAISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDERFCNGHEEIL 76
N+ A+ +G+ + D + P GFG D S + +C+G E ++
Sbjct: 338 NAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVM 397
Query: 77 SRYREIRPNIQPAGTTSFAPIIEMATKIVD--QSGGKHHVLVIISDGQVIRRNDAQHGSL 134
Y ++Q G T+FAP+I + + G ++ VL+I++DG +
Sbjct: 398 EAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGII----------- 446
Query: 135 SSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQ-DNIKMQTRTFHN----FKFVN 189
S T ++IV A K P+SII+VGVG +D + E D++++ +R + +FV
Sbjct: 447 -SDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSRGKYAERDIVQFVP 505
Query: 190 FTEIMSKSNN--ISPSLKEAEILLAIREILFQYKAAK 224
F + + +S N +S + ++L I E Y A+
Sbjct: 506 FRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYMRAR 542
>CNE5_MOUSE (Q8JZW4) Copine V
Length = 593
Score = 73.2 bits (178), Expect = 5e-13
Identities = 58/217 (26%), Positives = 100/217 (45%), Gaps = 26/217 (11%)
Query: 22 NSCEKAISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDERFCNGHEEIL 76
N+ A++ +G+ + D + P GFG D S + ++ C G + IL
Sbjct: 357 NAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGIL 416
Query: 77 SRYREIRPNIQPAGTTSFAPIIEMATK--IVDQSGGKHHVLVIISDGQVIRRNDAQHGSL 134
Y +Q G T+FAP++ + Q G ++ VL+II+DG +
Sbjct: 417 EAYHSSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVI----------- 465
Query: 135 SSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQ-DNIKMQTR----TFHNFKFVN 189
S T +AIV A K P+SII+VGVG +D + E D++++ +R +FV
Sbjct: 466 -SDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVP 524
Query: 190 FTEIMSKSNN--ISPSLKEAEILLAIREILFQYKAAK 224
F + + ++ N +S + ++L I + L Y A+
Sbjct: 525 FRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQ 561
>CNE5_HUMAN (Q9HCH3) Copine V
Length = 593
Score = 73.2 bits (178), Expect = 5e-13
Identities = 58/217 (26%), Positives = 100/217 (45%), Gaps = 26/217 (11%)
Query: 22 NSCEKAISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDERFCNGHEEIL 76
N+ A++ +G+ + D + P GFG D S + ++ C G + IL
Sbjct: 357 NAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGIL 416
Query: 77 SRYREIRPNIQPAGTTSFAPIIEMATK--IVDQSGGKHHVLVIISDGQVIRRNDAQHGSL 134
Y +Q G T+FAP++ + Q G ++ VL+II+DG +
Sbjct: 417 EAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVI----------- 465
Query: 135 SSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQ-DNIKMQTR----TFHNFKFVN 189
S T +AIV A K P+SII+VGVG +D + E D++++ +R +FV
Sbjct: 466 -SDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVP 524
Query: 190 FTEIMSKSNN--ISPSLKEAEILLAIREILFQYKAAK 224
F + + ++ N +S + ++L I + L Y A+
Sbjct: 525 FRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQ 561
>CNE1_MOUSE (Q8C166) Copine I
Length = 536
Score = 71.2 bits (173), Expect = 2e-12
Identities = 48/166 (28%), Positives = 81/166 (47%), Gaps = 23/166 (13%)
Query: 27 AISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDERFCNGHEEILSRYRE 81
A+ +G + D L P FGFG D S +F +C G + I+ YR+
Sbjct: 318 ALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQ 377
Query: 82 IRPNIQPAGTTSFAPIIEMATKIVDQ-----SGGKHHVLVIISDGQVIRRNDAQHGSLSS 136
P ++ G T+FAPII + Q S ++ VL++++DG V D +
Sbjct: 378 ALPQVRLYGPTNFAPIINHVARFAAQAAQQRSASQYFVLLLLTDGAV---TDVE------ 428
Query: 137 QKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQ-DNIKMQTRT 181
T A+V+A K P+S+I+VGVG ++++++ D ++TR+
Sbjct: 429 ---ATCKAVVDASKLPMSVIIVGVGGADFEVMEQLDADGGPLRTRS 471
>CNE2_MOUSE (P59108) Copine II
Length = 548
Score = 70.1 bits (170), Expect = 4e-12
Identities = 60/228 (26%), Positives = 101/228 (43%), Gaps = 27/228 (11%)
Query: 13 SLHDIRNV-PNSCEKAISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDE 66
SLH I + N AI +G+ + D + P GFG D S +F
Sbjct: 326 SLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTN 385
Query: 67 RFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIV-----DQSGGKHHVLVIISDG 121
FC+G + I Y P+I+ G T+F+PI+ + Q+ ++ +L+II+DG
Sbjct: 386 PFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQQTATQYFILLIITDG 445
Query: 122 QVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQ-DNIKMQTR 180
+ + +H A+V+A K P+SII+VGVG+ + ++ DN ++++
Sbjct: 446 VISDMEETRH------------AVVQASKLPMSIIIVGVGNADFAAMEFLDGDNRRLRSH 493
Query: 181 TFHNF--KFVNFTEIMSKSNNISPSLKEAEILLAIREILFQYKAAKEL 226
T V F N +L +A +L + + + QY K L
Sbjct: 494 TGEEAARDIVQFVPFREFRNAAKETLAKA-VLAELPQQVVQYFKHKNL 540
>CNE4_HUMAN (Q96A23) Copine IV (Copine 8)
Length = 557
Score = 68.9 bits (167), Expect = 1e-11
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 13 SLHDIRNV-PNSCEKAISIIGKKFSPFLDDNLIPCFGFG----DASTSDHD-VFSFYRDE 66
SLH I PN KA+ +G+ + D + P FGFG T HD +F D
Sbjct: 326 SLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPAFGFGARIPPEYTVSHDFAINFNEDN 385
Query: 67 RFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIVDQ-----SGGKHHVLVIISDG 121
C G + ++ Y+ P +Q G T+ APII+ K + ++ +L+I++DG
Sbjct: 386 PECAGIQGVVEAYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTDG 445
Query: 122 QVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGD 162
+ D T +AIV A P+S+I+VGVG+
Sbjct: 446 VITDMAD------------TREAIVHASHLPMSVIIVGVGN 474
>CNE3_MOUSE (Q8BT60) Copine III
Length = 570
Score = 68.6 bits (166), Expect = 1e-11
Identities = 55/172 (31%), Positives = 78/172 (44%), Gaps = 24/172 (13%)
Query: 13 SLHDIR-NVPNSCEKAISIIGKKFSPFLDDNLIPCFGFGDASTSDHDV-----FSFYRDE 66
SLH I N N AI +G + D + P FGFG V +F
Sbjct: 310 SLHYISPNGVNEYLTAIWSVGLVIQDYDADKMFPAFGFGAQVPPQWQVSHEFPMNFNPSN 369
Query: 67 RFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIV-----DQSGGKHHVLVIISDG 121
+CNG + I+ YR P I+ G T+F+PII + Q+ ++ VL+II+DG
Sbjct: 370 PYCNGIQGIVEAYRTCLPQIRLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDG 429
Query: 122 QVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQD 173
+ ++ T AIV A K P+SII+VGVG + + EF D
Sbjct: 430 VITDLDE------------TRQAIVNAAKLPMSIIIVGVGGADFSAM-EFLD 468
>CNE2_HUMAN (Q96FN4) Copine II
Length = 548
Score = 68.2 bits (165), Expect = 2e-11
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 13 SLHDIRNV-PNSCEKAISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDE 66
SLH I + N AI +G+ + D + P GFG D S +F
Sbjct: 326 SLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTN 385
Query: 67 RFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIVDQ-----SGGKHHVLVIISDG 121
FC+G + I Y P+I+ G T+F+PI+ + Q + ++ +L+II+DG
Sbjct: 386 PFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATQYFILLIITDG 445
Query: 122 QVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQDNIKMQTRT 181
+ + +H A+V+A K P+SII+VGVG+ + EF D R+
Sbjct: 446 VISDMEETRH------------AVVQASKLPMSIIIVGVGNADF-AAMEFLDGDSRMLRS 492
Query: 182 FHNFK----FVNFTEIMSKSNNISPSLKEAEILLAIREILFQYKAAKEL 226
+ V F N +L +A +L + + + QY K L
Sbjct: 493 HTGEEAARDIVQFVPFREFRNAAKETLAKA-VLAELPQQVVQYFKHKNL 540
>CNE3_HUMAN (O75131) Copine III
Length = 537
Score = 67.0 bits (162), Expect = 4e-11
Identities = 53/172 (30%), Positives = 78/172 (44%), Gaps = 24/172 (13%)
Query: 13 SLHDIR-NVPNSCEKAISIIGKKFSPFLDDNLIPCFGFGDASTSDHDV-----FSFYRDE 66
SLH I N N A+ +G + D + P FGFG V +F
Sbjct: 310 SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSN 369
Query: 67 RFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIV-----DQSGGKHHVLVIISDG 121
+CNG + I+ YR P I+ G T+F+PII + Q+ ++ VL+II+DG
Sbjct: 370 PYCNGIQGIVEAYRSCLPQIKLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDG 429
Query: 122 QVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQD 173
+ ++ T AIV A + P+SII+VGVG + + EF D
Sbjct: 430 VITDLDE------------TRQAIVNASRLPMSIIIVGVGGADFSAM-EFLD 468
>CNE7_HUMAN (Q9UBL6) Copine VII
Length = 633
Score = 65.5 bits (158), Expect = 1e-10
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 33/231 (14%)
Query: 13 SLHDIRNV-PNSCEKAISIIGKKFSPFLDDNLIPCFGFGDASTSDHDV-----FSFYRDE 66
SLH I PN KA+ +G+ + D GFG ++V +F ++
Sbjct: 401 SLHYINPYQPNEYLKALVSVGEICQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPED 460
Query: 67 RFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKI--VDQSGGK---HHVLVIISDG 121
C G + ++ Y+ P +Q G T+ APII ++ ++S GK +++L+I++DG
Sbjct: 461 DECEGIQGVVEAYQNCLPRVQLYGPTNVAPIISKVARVAAAEESTGKASQYYILLILTDG 520
Query: 122 QVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGDGPW-DM-VKEFQDNIKMQT 179
V D T +AIV A + P+SII+VGVG+ + DM V + D +
Sbjct: 521 VVTDMAD------------TREAIVRASRLPMSIIIVGVGNADFTDMQVLDGDDGVLRSP 568
Query: 180 RTFHNFK----FVNFTEIMSKSNNISPSLKEAEILLAIREILFQYKAAKEL 226
R + FV F E+ N SP+ +L + + + +Y + + L
Sbjct: 569 RGEPALRDIVQFVPFREL----KNASPAALAKCVLAEVPKQVVEYYSHRGL 615
>CNE1_HUMAN (Q99829) Copine I
Length = 537
Score = 65.5 bits (158), Expect = 1e-10
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 27 AISIIGKKFSPFLDDNLIPCFGFG-----DASTSDHDVFSFYRDERFCNGHEEILSRYRE 81
A+ +G + D L P FGFG D S +F +C G + I+ YR+
Sbjct: 319 ALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQ 378
Query: 82 IRPNIQPAGTTSFAPIIEMATKIVDQ-----SGGKHHVLVIISDGQVIRRNDAQHGSLSS 136
P ++ G T+FAPII + Q + ++ +L++++DG V D +
Sbjct: 379 ALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAV---TDVE------ 429
Query: 137 QKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEFQ-DNIKMQTRT 181
T +A+V A P+S+I+VGVG ++ +++ D + TR+
Sbjct: 430 ---ATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRS 472
>CNE6_MOUSE (Q9Z140) Copine VI (Neuronal-copine) (N-copine)
Length = 557
Score = 62.8 bits (151), Expect = 7e-10
Identities = 51/162 (31%), Positives = 75/162 (45%), Gaps = 23/162 (14%)
Query: 12 QSLHDIR-NVPNSCEKAISIIGKKFSPFLDDNLIPCFGFGDASTSDHDV-----FSFYRD 65
QSLH + PN +A+ +G + D P FGFG + +V +F +
Sbjct: 324 QSLHCLSPRQPNHYLQALRTVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPE 383
Query: 66 ERFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIV--DQSGG---KHHVLVIISD 120
C +++ YR P IQ G T+ APII + +QS G K+ VL++++D
Sbjct: 384 NPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTD 443
Query: 121 GQVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGD 162
G V S T AIV A + P+SII+VGVG+
Sbjct: 444 GVV------------SDMAETRTAIVRASRLPMSIIIVGVGN 473
>CNE6_HUMAN (O95741) Copine VI (Neuronal-copine) (N-copine)
Length = 557
Score = 62.8 bits (151), Expect = 7e-10
Identities = 51/162 (31%), Positives = 75/162 (45%), Gaps = 23/162 (14%)
Query: 12 QSLHDIR-NVPNSCEKAISIIGKKFSPFLDDNLIPCFGFGDASTSDHDV-----FSFYRD 65
QSLH + PN +A+ +G + D P FGFG + +V +F +
Sbjct: 324 QSLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPE 383
Query: 66 ERFCNGHEEILSRYREIRPNIQPAGTTSFAPIIEMATKIV--DQSGG---KHHVLVIISD 120
C +++ YR P IQ G T+ APII + +QS G K+ VL++++D
Sbjct: 384 NPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTD 443
Query: 121 GQVIRRNDAQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGD 162
G V S T AIV A + P+SII+VGVG+
Sbjct: 444 GVV------------SDMAETRTAIVRASRLPMSIIIVGVGN 473
>YGJI_CAEEL (Q9XUB9) Hypothetical protein T28F3.1 in chromosome IV
Length = 634
Score = 56.6 bits (135), Expect = 5e-08
Identities = 51/214 (23%), Positives = 87/214 (39%), Gaps = 24/214 (11%)
Query: 21 PNSCEKAISIIGKKFSPFLDDNLIPCFGFGDASTSDHDVFSFY-----RDERFCNGHEEI 75
PN E A+ + + FGFG + V + + R G +
Sbjct: 366 PNQYELALRSVLSICQHYNSSKTFEAFGFGAKLPNQSSVSAIFPLDLQRGTSEVVGITGV 425
Query: 76 LSRYREIRPNIQPAGTTSFAPIIEMATKIVDQ---SGGKHHVLVIISDGQVIRRNDAQHG 132
++ YR N+Q G T+FAPIIE + ++ +L+II+DG +
Sbjct: 426 MTAYRHALSNVQLYGPTNFAPIIENVARKAQNMIHDSARYQILLIITDGII--------- 476
Query: 133 SLSSQKLHTVDAIVEARKFPLSIILVGVGDGPWDMVKEF--QDNIKMQTRTFHNFKFVNF 190
S T+ +I+ A PLSII++GVG+ ++ + E D + Q V F
Sbjct: 477 ---SDMHATIRSIISASGLPLSIIIIGVGNEDFEKMHELDSDDALLQQDSRIAQRDIVQF 533
Query: 191 TEIMSKSNNISPSLKEAEILL--AIREILFQYKA 222
+ NN + +++ RE+L++ A
Sbjct: 534 VTMREFLNNGQGLYLDPDVIQENLAREVLYEVPA 567
>YP6A_CAEEL (Q09219) Hypothetical protein B0495.10 in chromosome II
Length = 753
Score = 52.4 bits (124), Expect = 9e-07
Identities = 36/154 (23%), Positives = 65/154 (41%), Gaps = 19/154 (12%)
Query: 16 DIRNVPNSCEKAISIIGKKFSPFLDDNLIPCFGFG----DASTSDHDVFSFYRDERFCNG 71
D R AI IG + + L FG G ++ F + + C G
Sbjct: 415 DQRRFDGELHMAIRAIGSIIRDYTPNRLFAAFGIGAKIPPTFHESNEFFLNFSMDPICRG 474
Query: 72 HEEILSRYREIRPNIQPAGTTSFAPIIEMATKIVDQSGGK---HHVLVIISDGQVIRRND 128
+ ++ YR+ + + P + +P+I T++ +SG + +HVL + + G+V +
Sbjct: 475 LDGVMEAYRKTQTMVTPLKESKLSPVINYVTRMSHRSGFRGLHYHVLALFTRGEVTDLKE 534
Query: 129 AQHGSLSSQKLHTVDAIVEARKFPLSIILVGVGD 162
Q A+ A PLSI+++G+GD
Sbjct: 535 IQ------------QALNSASDAPLSILIIGMGD 556
>SYC_HAEDU (Q7VMA0) Cysteinyl-tRNA synthetase (EC 6.1.1.16)
(Cysteine--tRNA ligase) (CysRS)
Length = 459
Score = 32.7 bits (73), Expect = 0.76
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 82 IRPNIQPAGTTSFAPIIEMATKIVDQSGGKHHVLVIISDGQVI--RRNDAQHGSLSSQKL 139
+RP+++P T A II M K++ +G + + +DG V+ + Q+G+LS Q L
Sbjct: 106 MRPDVEPRATEHIAEIIAMVEKLI-MNGHAY----VAADGDVMFDVTSFNQYGALSRQNL 160
Query: 140 HTVDA-----IVEARKFPLSIIL 157
+ A I A+K P+ +L
Sbjct: 161 DQLQAGARVEIKSAKKNPMDFVL 183
>GPMI_RHOBA (Q7UFG7) 2,3-bisphosphoglycerate-independent
phosphoglycerate mutase (EC 5.4.2.1)
(Phosphoglyceromutase) (BPG-independent PGAM) (iPGM)
Length = 543
Score = 32.7 bits (73), Expect = 0.76
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 96 PIIEMATKIVDQSGGKHHVLVIISDGQVIRRNDAQHG 132
P++ A V +SGG+ H+L ++SDG+V +D QHG
Sbjct: 106 PVVTGAIDHVKKSGGRLHLLGLMSDGRV--HSDLQHG 140
>SYC_YERPE (Q8ZCC0) Cysteinyl-tRNA synthetase (EC 6.1.1.16)
(Cysteine--tRNA ligase) (CysRS)
Length = 461
Score = 31.6 bits (70), Expect = 1.7
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 83 RPNIQPAGTTSFAPIIEMATKIVDQSGGKHHVLVIISDGQVIRRNDAQHGSLSSQKLHTV 142
RP+++P T A IIEM +++ + H + D +D +G LS Q L +
Sbjct: 107 RPDLEPRATHHIAEIIEMTERLIARG---HAYVASNGDVMFAVDSDPDYGVLSRQDLDQL 163
Query: 143 DA-----IVEARKFPLSIIL 157
A + + ++ P+ +L
Sbjct: 164 QAGARVEVADVKRNPMDFVL 183
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.139 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,548,406
Number of Sequences: 164201
Number of extensions: 1081210
Number of successful extensions: 2532
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2479
Number of HSP's gapped (non-prelim): 46
length of query: 234
length of database: 59,974,054
effective HSP length: 107
effective length of query: 127
effective length of database: 42,404,547
effective search space: 5385377469
effective search space used: 5385377469
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Medicago: description of AC149129.11