BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149127.6 - phase: 0
(421 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin... 44 0.001
GAR2_SCHPO (P41891) Protein gar2 42 0.003
SR40_YEAST (P32583) Suppressor protein SRP40 42 0.004
DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai... 40 0.015
DMP1_MOUSE (O55188) Dentin matrix acidic phosphoprotein 1 precur... 37 0.073
YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 36 0.16
NSR1_YEAST (P27476) Nuclear localization sequence binding protei... 36 0.16
VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogeni... 35 0.28
RA18_SCHPO (P53692) DNA repair protein rad18 35 0.28
DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin... 35 0.28
GDS1_YEAST (P41913) GDS1 protein 35 0.36
YBC9_YEAST (P38201) Hypothetical 42.6 kDa protein in AAC2-RPL19B... 35 0.47
ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associate... 35 0.47
Y742_CHLPN (Q9Z7G3) Protein CPn0742/CP0003/CPj0742/CpB0770 34 0.62
ASPM_PONPY (P62294) Abnormal spindle-like microcephaly-associate... 34 0.62
ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associate... 34 0.62
ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associate... 34 0.62
MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ... 34 0.81
ERC1_RAT (Q811U3) ERC protein 1 (CAZ-associated structural prote... 34 0.81
ERC1_MOUSE (Q99MI1) ERC protein 1 (Rab6-interacting protein 2) (... 34 0.81
>VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin)
[Contains: Lipovitellin I (LVI); Phosvitin (PV);
Lipovitellin II (LVII); YGP42]
Length = 1912
Score = 43.5 bits (101), Expect = 0.001
Identities = 33/106 (31%), Positives = 52/106 (48%), Gaps = 9/106 (8%)
Query: 229 TDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNK-NS 287
+D + SS + SS S+ +S+ S S+R+ SSS SKDS SS +K NS
Sbjct: 1167 SDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDSSSSSSKSNS 1226
Query: 288 KVNSESAAKAELLKALCRSQTR--------AREAEKAAQEACDEKE 325
K +S S++KA + + Q++ A E E++ E E +
Sbjct: 1227 KGSSSSSSKASGTRQKAKKQSKTTSFPHASAAEGERSVHEQKQETQ 1272
Score = 33.1 bits (74), Expect = 1.4
Identities = 20/62 (32%), Positives = 33/62 (52%)
Query: 233 ENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSE 292
+++ S N+K DS+ S++ +S S SD + SS S SDSS + +S +S
Sbjct: 1133 KSRQSKANEKKFYPFGDSSSSGSSSSSSSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSSS 1192
Query: 293 SA 294
S+
Sbjct: 1193 SS 1194
Score = 33.1 bits (74), Expect = 1.4
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 237 SSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAK 296
SS + S S+ +S++ +S S S SS SK + SS + NSK +S S++K
Sbjct: 1164 SSSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDSSSSSSK 1223
Query: 297 AELLKALCRSQTRAREAEKAAQEA 320
+ + S + +KA +++
Sbjct: 1224 SNSKGSSSSSSKASGTRQKAKKQS 1247
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 42.0 bits (97), Expect = 0.003
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 199 KKSFEYVENCDLPEPNIKPFRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTL 258
KKS + + PEP+ K +K Q + KEE SS + E SS+S +S +
Sbjct: 52 KKSKKEAKRASSPEPSKKSVKK----QKKSKKKEE---SSSESESESSSSESESSSSESE 104
Query: 259 TSGCSFQDSDRTFSSSESKD-------------SDSSCNKNSKVNSESAAKAELLK---- 301
+S + S SSSES++ S+SS + S+ E+ K E K
Sbjct: 105 SSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSS 164
Query: 302 -ALCRSQTRAREAEKAAQEACDEKE 325
+ S + E+E ++ E+ +E+E
Sbjct: 165 DSSSESSSSESESESSSSESEEEEE 189
Score = 38.1 bits (87), Expect = 0.043
Identities = 56/233 (24%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 113 NVYPKYMKNSDTRTSKIEASLNSDLYLTPKKKNEGEFWFSDDATSFLISEHCKSTSSDFE 172
+V PK K R S E S S + +KK++ + S ++ S S +S+SS+ E
Sbjct: 48 DVSPKKSKKEAKRASSPEPSKKS---VKKQKKSKKKEESSSESESESSSSESESSSSESE 104
Query: 173 PHWLGAEKSQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPNIKPFRKIHTLQPRETDKE 232
+E S + + V K+ E E+ + E+++E
Sbjct: 105 SSSSESESSSS---ESSSSESEEEVIVKTEEKKESSS------------ESSSSSESEEE 149
Query: 233 ENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDR----------------------- 269
E V + +K E S S+ +S+ S S +S+
Sbjct: 150 EEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSE 209
Query: 270 --TFSSSESKDSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEA 320
+ SSSES DSDSS + S+ +SE K KA S+ R + K +Q++
Sbjct: 210 SSSDSSSESGDSDSSSDSESESSSEDEKKR---KAEPASEERPAKITKPSQDS 259
>SR40_YEAST (P32583) Suppressor protein SRP40
Length = 406
Score = 41.6 bits (96), Expect = 0.004
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 121 NSDTRTSKIEASLNSDLYLTPKKKNEGEFWFSDDATSFLISEHCKSTSSDFEPHWLGAEK 180
+S + +S E+S +S + + + S+ ++S S S+SSD E
Sbjct: 42 SSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSSSSSSDSE------SS 95
Query: 181 SQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPNIKPFRKIHTLQPRETDKEENQVSSLN 240
S+ ++G +S + +S E+ D + K R+ +ET K + + S +
Sbjct: 96 SESDSSSSGSSSSSSSSSDESSSESESEDETK---KRARESDNEDAKETKKAKTEPESSS 152
Query: 241 QKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAA 295
S S+G +S++ + S DSD + SSS S DS+S +S+ +S S++
Sbjct: 153 SS----ESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSS 203
Score = 37.0 bits (84), Expect = 0.095
Identities = 23/71 (32%), Positives = 40/71 (55%), Gaps = 1/71 (1%)
Query: 228 ETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNS 287
E+D E + SS + SSDS+ +S + + S S + S S+S DSDSS + +S
Sbjct: 188 ESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDS-DSDSSSDSDS 246
Query: 288 KVNSESAAKAE 298
+S+S++ ++
Sbjct: 247 SGSSDSSSSSD 257
Score = 37.0 bits (84), Expect = 0.095
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 220 KIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDS 279
++ L +E + EE SS + SS S+ +S++ +SG S S + SSS S S
Sbjct: 10 EVPKLSVKEKEIEEKSSSSSSSSSSSSSSSSSSSSSSS-SSGESSSSSSSSSSSSSSDSS 68
Query: 280 DSSCNKNSKVNSESAAKA 297
DSS +++S +S S++ +
Sbjct: 69 DSSDSESSSSSSSSSSSS 86
Score = 35.4 bits (80), Expect = 0.28
Identities = 23/72 (31%), Positives = 40/72 (54%), Gaps = 1/72 (1%)
Query: 228 ETDKEENQVSSLNQKLEMCS-SDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKN 286
E+D + + SS + E S SDS +S++ + S DS + SSS+S S SS + +
Sbjct: 172 ESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSS 231
Query: 287 SKVNSESAAKAE 298
S +S+S + ++
Sbjct: 232 SDSDSDSDSSSD 243
Score = 34.3 bits (77), Expect = 0.62
Identities = 43/202 (21%), Positives = 79/202 (38%), Gaps = 18/202 (8%)
Query: 120 KNSDTRTSKIEASLNSDLYLTPKKKNEGEFWFSDDATSFLISEHCKSTS-SDFEPHWLGA 178
++ D + S N D T K K E E S +++S S +S S S+ + +
Sbjct: 121 ESEDETKKRARESDNEDAKETKKAKTEPESSSSSESSSSGSSSSSESESGSESDSDSSSS 180
Query: 179 EKSQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPNIKPFRKIHTLQPRETDKEENQVSS 238
S + + D S + S + + D +D + SS
Sbjct: 181 SSSSSDSESDSESDSQSSSSSSSSDSSSDSD----------------SSSSDSSSDSDSS 224
Query: 239 LNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAE 298
+ SDS+ +S+ S S S + SSS+ S S + +S +S S+++ E
Sbjct: 225 SSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELE 284
Query: 299 LLKALCRSQTRAREAEKAAQEA 320
+A +++A E ++ E+
Sbjct: 285 TKEATA-DESKAEETPASSNES 305
Score = 32.3 bits (72), Expect = 2.3
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 247 SSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAELLKALCRS 306
SS S+ +S + S S S + SSS S DS+SS +S + S++ +
Sbjct: 60 SSSSSSDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSE 119
Query: 307 QTRAREAEKAAQEACDE 323
E +K A+E+ +E
Sbjct: 120 SESEDETKKRARESDNE 136
Score = 30.8 bits (68), Expect = 6.8
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 247 SSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAELLKALCRS 306
SS S+ +S++ +S S + SSS S S SS + +S+ +SES + + + S
Sbjct: 52 SSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSS 111
Query: 307 QTRAREAEKAAQE 319
+ +E +++
Sbjct: 112 SSDESSSESESED 124
Score = 30.8 bits (68), Expect = 6.8
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 228 ETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSD-----RTFSSSESKDSDSS 282
E+ + SS + SSDS +S++ +S S SD + SSS S SS
Sbjct: 51 ESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSS 110
Query: 283 CNKNSKVNSESAAKAELLKALCRSQTR-AREAEKAAQE 319
+ + + +SES ++ E K S A+E +KA E
Sbjct: 111 -SSSDESSSESESEDETKKRARESDNEDAKETKKAKTE 147
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains:
Dentin phosphoprotein (Dentin phosphophoryn) (DPP);
Dentin sialoprotein (DSP)]
Length = 1253
Score = 39.7 bits (91), Expect = 0.015
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Query: 121 NSDTRTSKIEASLNSDLYLTPKKKNEGEFWFSDDATSFLISEHCKSTSSDFEPHWLGAEK 180
NS + ++S +SD + K++ SD + S S+ S SSD + ++
Sbjct: 600 NSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDS 659
Query: 181 SQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPNIKPFRKIHTLQPRETDKEENQVSSLN 240
S + D S + S + + D + + +D ++ S +
Sbjct: 660 SNSSNSSDSSDSSDSSDSSSSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSS 719
Query: 241 QKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAE 298
+ SS+SN S + S S SD + SS+ S SDSS + NS +S+S+ ++
Sbjct: 720 DSSD--SSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSD 775
Score = 37.7 bits (86), Expect = 0.056
Identities = 55/264 (20%), Positives = 113/264 (41%), Gaps = 9/264 (3%)
Query: 35 TSDSTDSDMKWWLHVKTNLAGDTDYTCQHLNTLESKLDAFSTRLHGDNVSIGSDQTVKNF 94
+SDS+DSD ++ + D+ + N+ +S + S+ + + S S + +
Sbjct: 847 SSDSSDSDSS--NRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSS 904
Query: 95 DAVSFVGNAATAAIEQQWNVYPKYMKNSDTRTSKIEASLNSDLYLTPKKKNEGEFWFSDD 154
D+ S + ++ + + + NS ++ ++S +SD + N + S D
Sbjct: 905 DSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSGD 964
Query: 155 ATSFLISEHCKSTSSDFEPHWLGAEKSQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPN 214
+++ S+ S SSD ++ S + D S + S + ++ D +
Sbjct: 965 SSNS--SDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSS 1022
Query: 215 IKPFRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSS 274
+ +D ++ SS + SSDS+ + ++ +SG S SD + SS
Sbjct: 1023 DSSNSSDSSDSSDSSDSSDSSDSSNSSD----SSDSSDSSDSSDSSGSS-DSSDSSDSSD 1077
Query: 275 ESKDSDSSCNKNSKVNSESAAKAE 298
S SDSS + +S +SES+ ++
Sbjct: 1078 SSDSSDSSDSSDSSDSSESSDSSD 1101
Score = 35.8 bits (81), Expect = 0.21
Identities = 22/66 (33%), Positives = 33/66 (49%)
Query: 229 TDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSK 288
+D ++ S N + SSDS+ S+ S S SD + SS S SDSS + +SK
Sbjct: 564 SDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSK 623
Query: 289 VNSESA 294
+S +
Sbjct: 624 SDSSKS 629
Score = 35.0 bits (79), Expect = 0.36
Identities = 51/267 (19%), Positives = 110/267 (41%), Gaps = 9/267 (3%)
Query: 32 DFTTSDSTDSDMKWWLHVKTNLAGDTDYTCQHLNTLESKLDAFSTRLHGDNVSIGSDQTV 91
D +SDS++S ++ + +D + ++ +S+ D+ + D+ S +
Sbjct: 592 DSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSS 651
Query: 92 KNFDAVSFVGNAATAAIEQQWNVYPKYMKNSDTRTSKIEASLNSDLYLTPKKKNEGEFWF 151
N D+ S N++ ++ + +SD+ +S ++S +SD + N E
Sbjct: 652 DNSDS-SDSSNSSNSSDSSDSSDSSDSSSSSDSSSSS-DSSNSSDSSDSSDSSNSSESSD 709
Query: 152 SDDATSFLISEHCKSTSSDFEPHWLGAEKSQPWWRTTGKDDLASLVAKKSFEYVENCDLP 211
S D++ S+ S++S+ + S + D S + S + ++ D
Sbjct: 710 SSDSSDSDSSDSSDSSNSN-------SSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSS 762
Query: 212 EPNIKPFRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTF 271
+ + ++ ++ SS + S+ S+ S+ + DSD +
Sbjct: 763 NSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSN 822
Query: 272 SSSESKDSDSSCNKNSKVNSESAAKAE 298
SS S SDSS + NS +S+S+ ++
Sbjct: 823 SSDSSNSSDSSDSSNSSDSSDSSDSSD 849
Score = 35.0 bits (79), Expect = 0.36
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 247 SSDSNGCTSTTLTSGCSFQDSDRTFS-SSESKDSDSSCNKNSKVNSESAAKAELLKALCR 305
SSDS+ + + + S DSD + S SS+S DSDSS + NS +S+S+ ++ +
Sbjct: 560 SSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDS 619
Query: 306 SQTRAREAEKAAQEACD 322
S +++ ++ K+ ++ D
Sbjct: 620 SDSKS-DSSKSESDSSD 635
>DMP1_MOUSE (O55188) Dentin matrix acidic phosphoprotein 1 precursor
(Dentin matrix protein-1) (DMP-1) (AG1)
Length = 503
Score = 37.4 bits (85), Expect = 0.073
Identities = 66/311 (21%), Positives = 125/311 (39%), Gaps = 28/311 (9%)
Query: 24 TSSKQLEPDFTTSDSTDSDMKWWLHVKTNLAGDTDYTCQHLNTLESKLDAFST--RLHGD 81
++S++ T SDS D D + H + + AGD+ QH + E ++ S HGD
Sbjct: 146 STSQENSAQDTPSDSKDQDSEDDAHSRPD-AGDS---AQHSESEEQRVGGGSEGQSSHGD 201
Query: 82 NVSIGSDQTVKNFDAVSFVGNAATAAIEQQWNVYPKYMKNSDTRTSKIEASLNSDLYLTP 141
D+ +++ D S + A + + + K TS ++ + + +
Sbjct: 202 GSEF-DDEGMQSDDPESTRSDRGHARMSSA-GIRSEESKGDREPTSTQDSDDSQSVEFSS 259
Query: 142 KKKNEGEFWFSDDATSFLISEHCKSTSSDFEPHWLGAEKSQPWWRTTGKDDLASLVAKKS 201
+K +D L + + T SD E+S R+ ++D A +++
Sbjct: 260 RKSFRRSRVSEEDYRGELTDSNSRETQSDSTEDTASKEES----RSESQEDTAESQSQE- 314
Query: 202 FEYVENCDLPEPNIKPFRKIHTL-QPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTS 260
D PE +P + E+Q + + + D+ T S
Sbjct: 315 -------DSPEGQDPSSESSEEAGEPSQESSSESQ-EGVTSESRGDNPDNTSQTGDQEDS 366
Query: 261 GCSFQDSDRTFSSSES----KDSDSSCNKNSKVNSESAAKAELLKALCRS--QTRAREAE 314
S +DS TFSSSES + +DS N++ ++ ES A+ + + Q+++ E
Sbjct: 367 ESSEEDSLNTFSSSESQSTEEQADSESNESLSLSEESQESAQDGDSSSQEGLQSQSASTE 426
Query: 315 KAAQEACDEKE 325
+QE+ E++
Sbjct: 427 SRSQESQSEQD 437
Score = 32.7 bits (73), Expect = 1.8
Identities = 24/102 (23%), Positives = 43/102 (41%), Gaps = 5/102 (4%)
Query: 228 ETDKEENQVSSLNQKLEMCSSDSN-----GCTSTTLTSGCSFQDSDRTFSSSESKDSDSS 282
+ D E N+ SL+++ + + D + G S + ++ Q+S S +DSDS
Sbjct: 388 QADSESNESLSLSEESQESAQDGDSSSQEGLQSQSASTESRSQESQSEQDSRSEEDSDSQ 447
Query: 283 CNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACDEK 324
+ SK S S A + R + ++ K +A K
Sbjct: 448 DSSRSKEESNSTGSASSSEEDIRPKNMEADSRKLIVDAYHNK 489
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor
Length = 374
Score = 36.2 bits (82), Expect = 0.16
Identities = 22/70 (31%), Positives = 33/70 (46%)
Query: 228 ETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNS 287
+T + VSS S S+ T+TT S S S + SSS S S SS + +S
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 288 KVNSESAAKA 297
+S S++ +
Sbjct: 184 SSSSSSSSSS 193
>NSR1_YEAST (P27476) Nuclear localization sequence binding protein
(P67)
Length = 414
Score = 36.2 bits (82), Expect = 0.16
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 247 SSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAELLKALCRS 306
SS+S+ +S++ S + + SSS S DS+SS + +S SE+ K E K S
Sbjct: 32 SSESSSSSSSSSESESESESESESSSSSSSSDSESSSSSSSDSESEAETKKEESKDSSSS 91
Query: 307 QTRAREAEKAAQEACDEKE 325
+ + E+ +E + K+
Sbjct: 92 SSDSSSDEEEEEEKEETKK 110
Score = 33.9 bits (76), Expect = 0.81
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 247 SSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAELLKALCRS 306
SS S +S++ +S + + SSS S SDS + +S +SES +AE K +
Sbjct: 30 SSSSESSSSSSSSSESESESESESESSSSSSSSDSESSSSSSSDSES--EAETKKEESKD 87
Query: 307 QTRAREAEKAAQEACDEKEHILSLFFKQAS 336
+ + + +E +EKE K++S
Sbjct: 88 SSSSSSDSSSDEEEEEEKEETKKEESKESS 117
>VIT2_CHICK (P02845) Vitellogenin II precursor (Major vitellogenin)
[Contains: Lipovitellin I (LVI); Phosvitin (PV);
Lipovitellin II (LVII); YGP40]
Length = 1850
Score = 35.4 bits (80), Expect = 0.28
Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Query: 181 SQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPNIKPFRKIHTLQPRETDKEENQVSSLN 240
++P +T+ AS A S + PN K +P + ++ + + N
Sbjct: 1116 TEPDAKTSSSSSSASSTATSS----SSSSASSPNRK--------KPMDEEENDQVKQARN 1163
Query: 241 QKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAELL 300
+ S S S+ +S S S R+ SSS S S S + +S +S ++ +
Sbjct: 1164 KDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSKSSSSS 1223
Query: 301 KALCRSQTRAREAEKAAQEA 320
S +R+R + K++ +
Sbjct: 1224 SKSSSSSSRSRSSSKSSSSS 1243
Score = 32.0 bits (71), Expect = 3.1
Identities = 34/142 (23%), Positives = 54/142 (37%), Gaps = 2/142 (1%)
Query: 152 SDDATSFLISEHCKSTSSDFEPHWLGAEKSQPWWRTTGKDDLASLVAKKSFEYVENCDLP 211
S A+S S S SS + E++ + KD +S + KS +
Sbjct: 1126 SSSASSTATSSSSSSASSPNRKKPMDEEENDQVKQARNKDASSSSRSSKSSNSSKRSSSK 1185
Query: 212 EPNIKPFRKIHTLQPRETDKEENQVSSL--NQKLEMCSSDSNGCTSTTLTSGCSFQDSDR 269
N + + + + SS N K SS S+ +S + +S S S
Sbjct: 1186 SSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSS 1245
Query: 270 TFSSSESKDSDSSCNKNSKVNS 291
+ SSS SK S S + +S +S
Sbjct: 1246 SSSSSSSKSSSSRSSSSSSKSS 1267
>RA18_SCHPO (P53692) DNA repair protein rad18
Length = 1140
Score = 35.4 bits (80), Expect = 0.28
Identities = 71/312 (22%), Positives = 130/312 (40%), Gaps = 36/312 (11%)
Query: 55 GDTDYTCQHLN--TLESKLDAFSTRLHGDNVSIGSDQTVKNFD-AVSFVGNAATAAIEQQ 111
G ++Y + N + +K D + I + + D A F+GN++ +++
Sbjct: 198 GSSEYRLRSFNGTVISTKRDELDNICDHMGLQIDNPMNILTQDTARQFLGNSSP---KEK 254
Query: 112 WNVYPK--YMKNSDTRTSKIEASLNSDLYLTPKKKNEGEFWFSDDATSFLISEHCKSTSS 169
+ ++ K +K + S IE SL + + KK + + L+ E + T +
Sbjct: 255 YQLFMKGIQLKQLEENYSLIEQSLINTKNVLGNKKTGVSYLAKKEEEYKLLWEQSRETEN 314
Query: 170 DFEPHWLGAEKSQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPNIKPFRKIHTLQPRET 229
+ L +K + W + + L+A+K F++ E +K L+ T
Sbjct: 315 LH--NLLEQKKGEMVWAQVVEVEKELLLAEKEFQHAE--------VKLSEAKENLESIVT 364
Query: 230 DKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKV 289
++ + ++ K E+ + G T TT + F+D +TF S+ +D K
Sbjct: 365 NQSDID-GKISSKEEVIGR-AKGETDTTKSK---FEDIVKTFDGYRSEMNDVDIQKRDIQ 419
Query: 290 NSESAAKAELLKALCRSQ---TRARE-------AEKAAQEACDEKEHILSLFFKQASQLF 339
NS +AAK+ L + R Q RARE EK A E+ + + I L +Q +L
Sbjct: 420 NSINAAKSCL--DVYREQLNTERARENNLGGSQIEKRANESNNLQREIADL-SEQIVELE 476
Query: 340 AYKQWLHVLQLE 351
+ + LH LE
Sbjct: 477 SKRNDLHSALLE 488
>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin
matrix protein-3) (DMP-3) [Contains: Dentin
phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
sialoprotein (DSP)]
Length = 934
Score = 35.4 bits (80), Expect = 0.28
Identities = 20/70 (28%), Positives = 35/70 (49%)
Query: 229 TDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSK 288
+D ++ SS + CS S+ S+ + DS + SSS S SDSS + +S
Sbjct: 637 SDSSDSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSSSSSNSSDSSDSSDSS 696
Query: 289 VNSESAAKAE 298
+S+S+ ++
Sbjct: 697 SSSDSSDSSD 706
Score = 33.9 bits (76), Expect = 0.81
Identities = 24/73 (32%), Positives = 40/73 (53%), Gaps = 4/73 (5%)
Query: 230 DKEENQVS----SLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNK 285
DK+E+ S S + + + SSDS+ +S + S S SD + SS S SDSS +
Sbjct: 527 DKDESDSSDHDNSSDSESKSDSSDSSDDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSN 586
Query: 286 NSKVNSESAAKAE 298
+S +S+S+ ++
Sbjct: 587 SSSDSSDSSGSSD 599
Score = 33.5 bits (75), Expect = 1.1
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 228 ETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNS 287
++D + S K E SSD + + + S S D + SS S SDSS + +S
Sbjct: 514 DSDSNGDGDSESEDKDESDSSDHDNSSDSESKSDSSDSSDDSSDSSDSSDSSDSSDSSDS 573
Query: 288 KVNSESAAKAELLKALCRSQTRAREAEKAAQEACDEKE 325
+S+S+ ++ + S + + + CD +
Sbjct: 574 SDSSDSSDSSDSNSSSDSSDSSGSSDSSDSSDTCDSSD 611
Score = 32.3 bits (72), Expect = 2.3
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 247 SSDSNGCT--STTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESA 294
SSDS+G + S + S S SD + SSS S SDSS + +S +SES+
Sbjct: 710 SSDSSGSSDSSDSSASSDSSSSSDSSDSSSSSDSSDSSDSSDSSDSSESS 759
Score = 31.6 bits (70), Expect = 4.0
Identities = 22/75 (29%), Positives = 36/75 (47%), Gaps = 5/75 (6%)
Query: 229 TDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDS-----SC 283
+D ++ SS + S S+ S+ ++ DSD SSS+S D DS +
Sbjct: 849 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSDSKDSSSDSSDGDSKSGNGNS 908
Query: 284 NKNSKVNSESAAKAE 298
+ NS NS+S + +E
Sbjct: 909 DSNSDSNSDSDSDSE 923
Score = 30.8 bits (68), Expect = 6.8
Identities = 55/291 (18%), Positives = 111/291 (37%), Gaps = 2/291 (0%)
Query: 35 TSDSTDSDMKWWLHVKTNLAGDTDYTCQHLNTLESKLDAFSTRLHGDNVSIGSDQTVKNF 94
++ S +SD ++ GD YT + ++ D+ + + S G + N
Sbjct: 460 SNGSDESDTNSESANESGSRGDASYTSDESSDDDNDSDSHAGEDDSSDDSSGDGDSDSNG 519
Query: 95 DAVSFVGNAATAAIEQQWNVYPKYMKNSDTRTSKIEASLNSDLYLTPKKKNEGEFWFSDD 154
D S + + N K SD+ S ++S +SD + + + S D
Sbjct: 520 DGDSESEDKDESDSSDHDNSSDSESK-SDSSDSSDDSSDSSDSSDSSDSSDSSDSSDSSD 578
Query: 155 ATSFLISEHCKSTSSDFEPHWLGAEKSQPWWRTTGKDDLASLVAKKSFEYVENCDLPEPN 214
++ S + S SSD ++ S + D S + S + ++ D + +
Sbjct: 579 SSDSSDS-NSSSDSSDSSGSSDSSDSSDTCDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 637
Query: 215 IKPFRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSS 274
+ + ++ SS + S S+ +S + +S S SD + SSS
Sbjct: 638 DSSDSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSSSSSNSSDSSDSSDSSS 697
Query: 275 ESKDSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACDEKE 325
S SDSS + +S +S S+ ++ + S + ++ ++ D +
Sbjct: 698 SSDSSDSSDSSDSSDSSGSSDSSDSSASSDSSSSSDSSDSSSSSDSSDSSD 748
>GDS1_YEAST (P41913) GDS1 protein
Length = 522
Score = 35.0 bits (79), Expect = 0.36
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 272 SSSESKDSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACDE 323
SSSES +SS +S VNS +A+ AE L + SQ RE+ ++QE+ +E
Sbjct: 440 SSSESSQYNSS--SSSPVNSAAASSAESLSDINSSQDNGRESNPSSQESRNE 489
>YBC9_YEAST (P38201) Hypothetical 42.6 kDa protein in AAC2-RPL19B
intergenic region
Length = 376
Score = 34.7 bits (78), Expect = 0.47
Identities = 32/158 (20%), Positives = 67/158 (42%), Gaps = 31/158 (19%)
Query: 248 SDSNGCTSTTLTSGCSFQDSDRTFSSSESKDSDSSCNKNSKVNSESAAKAELLKALCRSQ 307
S S+ + +T++S + +++ S S+S +S++++E AK L++
Sbjct: 231 SSSSSSSESTVSSSRKRKPCHDSYTHSSPSSSESKKISDSRLSAEGLAKVLNLES----- 285
Query: 308 TRAREAEKAAQEACDEKEHILSLFFKQASQLFAYKQWLH----------VLQL-ENLCLQ 356
+EA + IL +F + + YK W+ + QL E + ++
Sbjct: 286 ---------PEEALKRERFILGIFQNELNYPLGYKTWIRDTTKEYRTKLINQLHERVKVK 336
Query: 357 YKSKNQPLLNNL------FPYEGKKHRKNRRKVKNSRR 388
Y NQ +L + + + + R+ R K+K +R
Sbjct: 337 YPEYNQSILETIIRRGTYYMMQSRLRRERRMKLKERKR 374
>ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associated
protein homolog
Length = 3477
Score = 34.7 bits (78), Expect = 0.47
Identities = 35/164 (21%), Positives = 61/164 (36%), Gaps = 12/164 (7%)
Query: 218 FRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESK 277
FR + Q + EE + +NQ +C S + G Q+ K
Sbjct: 2749 FRGMKVRQKLKNVSEERMAAVVNQSA-LCCYRSKTQYEAVQSEGVMIQEW--------YK 2799
Query: 278 DSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQ---EACDEKEHILSLFFKQ 334
S +C++ ++ +S+S A + KA CR TR E +K A + + F +Q
Sbjct: 2800 ASGLACSQEAEYHSQSRAAVTIQKAFCRMATRKLETQKCAALRIQFFFQMAVYRRRFVQQ 2859
Query: 335 ASQLFAYKQWLHVLQLENLCLQYKSKNQPLLNNLFPYEGKKHRK 378
+ + Q L Y+ L N+ + KH++
Sbjct: 2860 KRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYRAFLSAKHQR 2903
>Y742_CHLPN (Q9Z7G3) Protein CPn0742/CP0003/CPj0742/CpB0770
Length = 142
Score = 34.3 bits (77), Expect = 0.62
Identities = 29/129 (22%), Positives = 62/129 (47%), Gaps = 24/129 (18%)
Query: 266 DSDRTFSSSESKDSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACDE-- 323
D D +F SS S DSD A+ + ++Q + +E +K AQE +
Sbjct: 23 DFDPSFGSSLSSDSD----------------ADYEYLITKTQEKIQELDKRAQEILTQTG 66
Query: 324 --KEHILSLFFKQASQLFAYKQWLHVLQLENLCLQYKSKNQPLLN--NLFPYEGKKHRKN 379
KE + F F+ ++WL + ++ + C +Y+ + + L+N L + K+ ++
Sbjct: 67 MSKEQME--VFANNPDNFSPEEWLALEKVRSSCDEYRKETENLINEITLDLHPTKESKRP 124
Query: 380 RRKVKNSRR 388
++K+ ++++
Sbjct: 125 KQKLSSTKK 133
>ASPM_PONPY (P62294) Abnormal spindle-like microcephaly-associated
protein homolog
Length = 3471
Score = 34.3 bits (77), Expect = 0.62
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 12/164 (7%)
Query: 218 FRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESK 277
FR + Q + EE + +NQ +C S + G Q+ K
Sbjct: 2743 FRGMKVRQKLKNLSEEKMAAIVNQSA-LCCYRSKTQYEAVQSEGVMIQEW--------YK 2793
Query: 278 DSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACD---EKEHILSLFFKQ 334
S +C++ ++ +S+S A + KA CR TR E +K A + F +Q
Sbjct: 2794 ASGLACSQEAEYHSQSRAAVTIQKAFCRMATRKLETQKCAALRIQFFLQMAVYRRRFVQQ 2853
Query: 335 ASQLFAYKQWLHVLQLENLCLQYKSKNQPLLNNLFPYEGKKHRK 378
+ + Q L Y+ L N+ + KH++
Sbjct: 2854 KRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYRAFLSAKHQR 2897
>ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associated
protein homolog
Length = 3477
Score = 34.3 bits (77), Expect = 0.62
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 12/164 (7%)
Query: 218 FRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESK 277
FR + Q + EE + +NQ +C S + G Q+ K
Sbjct: 2749 FRGMKVRQKLKNVSEEKMAAIVNQSA-LCCYRSKTQYEAVQSEGVMIQEW--------YK 2799
Query: 278 DSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACD---EKEHILSLFFKQ 334
S +C++ ++ +S+S A + KA CR TR E +K A + F +Q
Sbjct: 2800 ASGLACSQEAECHSQSRAAVTIQKAFCRMVTRKLETQKCAALRIQFFLQMAVYRRRFVQQ 2859
Query: 335 ASQLFAYKQWLHVLQLENLCLQYKSKNQPLLNNLFPYEGKKHRK 378
+ + Q L Y+ L N+ + KH++
Sbjct: 2860 KRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYRAFLSAKHQR 2903
>ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associated
protein (Abnormal spindle protein homolog) (Asp homolog)
Length = 3477
Score = 34.3 bits (77), Expect = 0.62
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 12/164 (7%)
Query: 218 FRKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESK 277
FR + Q + EE + +NQ +C S + G Q+ K
Sbjct: 2749 FRGMKVRQKLKNVSEEKMAAIVNQSA-LCCYRSKTQYEAVQSEGVMIQEW--------YK 2799
Query: 278 DSDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACD---EKEHILSLFFKQ 334
S +C++ ++ +S+S A + KA CR TR E +K A + F +Q
Sbjct: 2800 ASGLACSQEAEYHSQSRAAVTIQKAFCRMVTRKLETQKCAALRIQFFLQMAVYRRRFVQQ 2859
Query: 335 ASQLFAYKQWLHVLQLENLCLQYKSKNQPLLNNLFPYEGKKHRK 378
+ + Q L Y+ L N+ + KH++
Sbjct: 2860 KRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYRAFLSAKHQR 2903
>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)
[Contains: Micronuclear linker histone-alpha;
Micronuclear linker histone-beta; Micronuclear linker
histone-delta; Micronuclear linker histone-gamma]
Length = 633
Score = 33.9 bits (76), Expect = 0.81
Identities = 28/87 (32%), Positives = 41/87 (46%), Gaps = 6/87 (6%)
Query: 234 NQVSSLNQKLEMCSSDSNGCTSTTL----TSGCSFQDSDRTFSSSESKDSDSSCNKNSKV 289
+Q SS N++ S D G S++ + G S++ SSS SK S SS KN K
Sbjct: 219 SQSSSSNRRKASSSKDQKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSS--KNKKS 276
Query: 290 NSESAAKAELLKALCRSQTRAREAEKA 316
+S K+ K S +R R+A +
Sbjct: 277 SSSKNKKSSSSKGRKSSSSRGRKASSS 303
>ERC1_RAT (Q811U3) ERC protein 1 (CAZ-associated structural protein
2) (CAST2)
Length = 948
Score = 33.9 bits (76), Expect = 0.81
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 219 RKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKD 278
+KI LQ + DKE+ Q+SSL ++++ +D+ + T + D +RT + +
Sbjct: 550 KKIENLQEQLRDKEK-QMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQR 608
Query: 279 SDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACDEKEHILSL 330
K ++++ +L + + Q E E + D KEH SL
Sbjct: 609 DRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEAS---LLDLKEHASSL 657
>ERC1_MOUSE (Q99MI1) ERC protein 1 (Rab6-interacting protein 2)
(Rab6IP2) (CAZ-associated structural protein 2) (CAST2)
Length = 1120
Score = 33.9 bits (76), Expect = 0.81
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 219 RKIHTLQPRETDKEENQVSSLNQKLEMCSSDSNGCTSTTLTSGCSFQDSDRTFSSSESKD 278
+KI LQ + DKE+ Q+SSL ++++ +D+ + T + D +RT + +
Sbjct: 578 KKIENLQEQLRDKEK-QMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQR 636
Query: 279 SDSSCNKNSKVNSESAAKAELLKALCRSQTRAREAEKAAQEACDEKEHILSL 330
K ++++ +L + + Q E E + D KEH SL
Sbjct: 637 DRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEAS---LLDIKEHASSL 685
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.127 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,332,102
Number of Sequences: 164201
Number of extensions: 1924488
Number of successful extensions: 6573
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 6282
Number of HSP's gapped (non-prelim): 272
length of query: 421
length of database: 59,974,054
effective HSP length: 113
effective length of query: 308
effective length of database: 41,419,341
effective search space: 12757157028
effective search space used: 12757157028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC149127.6