BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149038.3 + phase: 0
(1557 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 516 e-145
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 471 e-132
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 211 2e-53
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 182 5e-45
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 144 2e-33
YMU0_YEAST (Q04670) Transposon Ty1 protein B 139 6e-32
YME4_YEAST (Q04711) Transposon Ty1 protein B 139 6e-32
YMD9_YEAST (Q03434) Transposon Ty1 protein B 139 6e-32
YMT5_YEAST (Q04214) Transposon Ty1 protein B 138 1e-31
YJZ9_YEAST (P47100) Transposon Ty1 protein B 138 1e-31
YJZ7_YEAST (P47098) Transposon Ty1 protein B 136 4e-31
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 135 9e-31
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 120 3e-26
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 77 4e-13
HORN_HUMAN (Q86YZ3) Hornerin 60 6e-08
GR2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b) 51 2e-05
YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III 51 3e-05
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript... 51 3e-05
ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hn... 50 4e-05
ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (... 50 4e-05
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 516 bits (1329), Expect = e-145
Identities = 415/1480 (28%), Positives = 659/1480 (44%), Gaps = 238/1480 (16%)
Query: 83 EWEEQDSLLCTWILSTISSSLLSRFVRLRFSHQVWDEIHNYCYTQMRTRSRQLRSELRTI 142
+W + D + I +S +++ + + +W + + ++ T L+ +L +
Sbjct: 51 DWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYAL 110
Query: 143 --TKGTRSIAEFIARIRSISESLMSIGDPVAHRDLIETVLEALPEEFNPIVATVNSQTEV 200
++GT ++ + L ++G + D +L +LP ++ + T+
Sbjct: 111 HMSEGTNFLSHLNV-FNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTT 169
Query: 201 ISLDELESQLLTQEARNEKFKKALVGETASVNLTHAENSGEKNGHNQPQTGSYPDQQFNI 260
I L ++ S LL NEK +K EN G+
Sbjct: 170 IELKDVTSALLL----NEKMRKK------------PENQGQ------------------- 194
Query: 261 SGNPTGNNSSQYFNPNFGGRNGSRGRGFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASI 320
+ G S + N GR+G+RG+ ++ R R C C + GH
Sbjct: 195 ALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN----------CYNCNQPGHFKRD 244
Query: 321 CYHRLSVPPQYEGYGSLGGNFGGNLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPF 380
C P +G G G + A + NV +
Sbjct: 245 C------PNPRKGKGETSGQKNDD-----NTAAMVQNNDNVVL----------------- 276
Query: 381 PPQFGNSRPPAPQAYITGNESTSSNSFNNGWYPDSGATHHVTPDANNLMDAASFSGSDQM 440
F N +++G ES W D+ A+HH TP +L +
Sbjct: 277 ---FINEEEEC--MHLSGPESE--------WVVDTAASHHATP-VRDLFCRYVAGDFGTV 322
Query: 441 YIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNLLHVPSITKNLVSVSQFCKDNNVFFEFH 500
+GN I IG + + + TL L ++ HVP + NL+ S D + + +
Sbjct: 323 KMGNTSYSKIAGIGDICIKT--NVGCTLVLKDVRHVPDLRMNLI--SGIALDRDGYESYF 378
Query: 501 SNICYVKSQDSTKILLKGHLGDDGLYQFDQPYVPSVSRTASSSSVATSSLSLNNCFSPSS 560
+N + ++ S ++ KG VA +L N
Sbjct: 379 ANQKWRLTKGSL-VIAKG--------------------------VARGTLYRTNA----- 406
Query: 561 LSLSRSQCNNGSVYTPIHTSGSSNDSSNSLSLYKVWHNRLGHPHHEVVRSVMKLCNQQLP 620
C G N + + +S+ +WH R+GH + ++ + K
Sbjct: 407 -----EICQ-----------GELNAAQDEISV-DLWHKRMGHMSEKGLQILAKKSLISYA 449
Query: 621 NKSFTDFCSACCLGKSHRLPSVSSKTVYNKPFELIFCDLWGPASVESHGGYSYFLICVDA 680
+ C C GK HR+ +S +L++ D+ GP +ES GG YF+ +D
Sbjct: 450 KGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDD 509
Query: 681 YSRYTWIFPLKLKSHTLITFQNFKTMVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGI 738
SR W++ LK K FQ F +VE + +K +++D GGE+ R F ++ ++ GI
Sbjct: 510 ASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGI 569
Query: 739 THRLTCPHTHHQNGSVERKHRHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSPIL 798
H T P T NG ER +R IVE ++L AKLP +W A TA YLINR PS L
Sbjct: 570 RHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPL 629
Query: 799 NNKSPFFLLHLQIPDYKFLKSFGCSCFPFTRPYNNHKLELRSKECVFLGYSPSHKGYKCL 858
+ P + + Y LK FGC F KL+ +S C+F+GY GY+
Sbjct: 630 AFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLW 689
Query: 859 DPTGRMFI-SKDVIFNEYKFPYSELFTSGQSSSPPTTSSDHTPLPSFLFPLNNKQCPTTQ 917
DP + I S+DV+F E SE+ T+ S +P+F+ + PT+
Sbjct: 690 DPVKKKVIRSRDVVFRE-----SEVRTAADMSEKVKNGI----IPNFVTIPSTSNNPTSA 740
Query: 918 SSSTPTTTLHTASPHSSFPESNQSNHHHSIQDTHASSHSNHHNISPGPIFNPTPISTHPP 977
S+T + P + Q + +++ HP
Sbjct: 741 ESTTDEVSEQGEQPGEVIEQGEQLD--EGVEEVE-----------------------HP- 774
Query: 978 SPSPSSHSHNTYHSISVEPVTSQPSTQAEPHRIHPNNTHSMATRAKHGIVQKRKHPT--- 1034
+Q Q +P R R++ V+ R++P+
Sbjct: 775 ---------------------TQGEEQHQPLR-----------RSERPRVESRRYPSTEY 802
Query: 1035 -LLLTHIEPTGYRQAMKQP---QWLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFR 1090
L+ EP ++ + P Q ++AMQ E E+L KN T+ LV LP ++ + CKWVF+
Sbjct: 803 VLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFK 862
Query: 1091 TKQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTLAVTNKWCIQQLD 1150
K++ D + +YKARLV KGF Q G D+ E FSPVVK ++R++L+LA + ++QLD
Sbjct: 863 LKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLD 922
Query: 1151 VNNAFLNGYLEEEVYMTQPPGFE-AVDPSLVCKLNKALYGLKQAPRAWFERLKSTLLKLG 1209
V AFL+G LEEE+YM QP GFE A +VCKLNK+LYGLKQAPR W+ + S +
Sbjct: 923 VKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQT 982
Query: 1210 FCSSKCDPSLFILHANQHS-TFMLVYVDDILITGSSASLIQQLVKKLNAEFSLKDLGKLD 1268
+ + DP ++ ++++ +L+YVDD+LI G LI +L L+ F +KDLG
Sbjct: 983 YLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQ 1042
Query: 1269 YFLGIE-VHYSENGSLLLSQKKYIQDLLVKANMANANGIASPMASSTKLTK--------Y 1319
LG++ V + L LSQ+KYI+ +L + NM NA +++P+A KL+K
Sbjct: 1043 QILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEE 1102
Query: 1320 GSNHVSDPTFFRSIVGGLQYVTV-TRPEISYSVNKVCQFLSAPLEDHWKAVKRILRYLKG 1378
N P + S VG L Y V TRP+I+++V V +FL P ++HW+AVK ILRYL+G
Sbjct: 1103 KGNMAKVP--YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160
Query: 1379 TIHHGLLINPAPMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLISWWAKKQTLVA 1438
T L + P+ L + DAD A D D+R+S++G ISW +K Q VA
Sbjct: 1161 TTGDCLCFGGS---DPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVA 1216
Query: 1439 RSSAEAEYRSLAQASAEVLWIQSLLKELKVPTAIPQIFCDNLSTVSLAHNPVLHSRTKHM 1498
S+ EAEY + + E++W++ L+EL + ++CD+ S + L+ N + H+RTKH+
Sbjct: 1217 LSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHI 1276
Query: 1499 ELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSASRF 1538
++ ++RE V + L V I AD+LTK + ++F
Sbjct: 1277 DVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 471 bits (1212), Expect = e-132
Identities = 319/997 (31%), Positives = 505/997 (49%), Gaps = 57/997 (5%)
Query: 593 YKVWHNRLGHPHH----EVVRSVMKLCNQQLPNKSFT-DFCSACCLGKSHRLP--SVSSK 645
+++WH R GH E+ R M L N + + C C GK RLP + K
Sbjct: 415 FRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDK 474
Query: 646 TVYNKPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPLKLKSHTLITFQNFKT 705
T +P ++ D+ GP + + +YF+I VD ++ Y + +K KS FQ+F
Sbjct: 475 THIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVA 534
Query: 706 MVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKHRHIVE 763
E +NL + + D G E+ QF GI++ LT PHT NG ER R I E
Sbjct: 535 KSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITE 594
Query: 764 TGLTLLANAKLPLHYWDHAFLTATYLINRLPSPIL--NNKSPFFLLHLQIPDYKFLKSFG 821
T+++ AKL +W A LTATYLINR+PS L ++K+P+ + H + P K L+ FG
Sbjct: 595 KARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFG 654
Query: 822 CSCFPFTRPYNNHKLELRSKECVFLGYSPSHKGYKCLDPTGRMFI-SKDVIFNEYKFPYS 880
+ + + K + +S + +F+GY P+ G+K D FI ++DV+ +E S
Sbjct: 655 ATVYVHIKNKQG-KFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVNS 711
Query: 881 E-------LFTSGQSSSPPTTSSDHTPLPSFLFPLNNKQCPTTQSSSTPTTTLHTASPHS 933
+ S +D + FP +K+C Q + + P+
Sbjct: 712 RAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPND 771
Query: 934 S-------FPESNQSNHHHSIQDTHASSHSNHHNISPGPI------FNPTPISTHPPSPS 980
S FP N+S +IQ S SN + ++ N + S +P + S
Sbjct: 772 SRKIIQTEFP--NESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNP-NES 828
Query: 981 PSSHSHNTYHSISVEPVTSQPSTQ-----AEPHRIHPNNTHSMATRAKHGIVQKRKHPTL 1035
S + I ++ T + +E + P +++ + + +V H
Sbjct: 829 RESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNA-HTIF 887
Query: 1036 --LLTHIEPTGYRQAMKQPQWLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFRTKQ 1093
+ + YR + W +A+ E A NNTWT+ P ++ V +WVF K
Sbjct: 888 NDVPNSFDEIQYRD--DKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKY 945
Query: 1094 NPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTLAVTNKWCIQQLDVNN 1153
N G+ +YKARLVA+GF Q DY+ETF+PV + + R +L+L + + Q+DV
Sbjct: 946 NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1005
Query: 1154 AFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWFERLKSTLLKLGFCSS 1213
AFLNG L+EE+YM P G + + VCKLNKA+YGLKQA R WFE + L + F +S
Sbjct: 1006 AFLNGTLKEEIYMRLPQGI-SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNS 1064
Query: 1214 KCDPSLFILHAN--QHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLKDLGKLDYFL 1271
D ++IL + ++L+YVDD++I + + + L +F + DL ++ +F+
Sbjct: 1065 SVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFI 1124
Query: 1272 GIEVHYSENGSLLLSQKKYIQDLLVKANMANANGIASPMASSTKLTKYGSNHVSDPTFFR 1331
GI + E+ + LSQ Y++ +L K NM N N +++P+ S S+ + T R
Sbjct: 1125 GIRIEMQED-KIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN-TPCR 1182
Query: 1332 SIVGGLQYVTV-TRPEISYSVNKVCQFLSAPLEDHWKAVKRILRYLKGTIHHGLLINPAP 1390
S++G L Y+ + TRP+++ +VN + ++ S + W+ +KR+LRYLKGTI L+
Sbjct: 1183 SLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNL 1242
Query: 1391 MHQPLSLTAFCDADWASDPDDRRSTSGACI-LLGPNLISWWAKKQTLVARSSAEAEYRSL 1449
+ + + D+DWA DR+ST+G + NLI W K+Q VA SS EAEY +L
Sbjct: 1243 AFEN-KIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMAL 1301
Query: 1450 AQASAEVLWIQSLLKELKVPTAIP-QIFCDNLSTVSLAHNPVLHSRTKHMELDIFFVREK 1508
+A E LW++ LL + + P +I+ DN +S+A+NP H R KH+++ F RE+
Sbjct: 1302 FEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQ 1361
Query: 1509 VISKDLIVSHIPAQYQVADILTKPLSASRFLELRNKL 1545
V + + + +IP + Q+ADI TKPL A+RF+ELR+KL
Sbjct: 1362 VQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKL 1398
Score = 35.8 bits (81), Expect = 0.94
Identities = 53/293 (18%), Positives = 104/293 (35%), Gaps = 59/293 (20%)
Query: 33 DETNYLQWKQQVEGVLRGTKMVRHVVSPQIPPVFLNDAAREAGTENPAYTEWEEQDSLLC 92
D Y WK ++ +L +++ VV +P N W++ +
Sbjct: 12 DGEKYAIWKFRIRALLAEQDVLK-VVDGLMP--------------NEVDDSWKKAERCAK 56
Query: 93 TWILSTISSSLLSRFVRLRFSHQVWDEIHNYCYTQMRTRSRQLRSELRTITKGTR-SIAE 151
+ I+ +S S L+ + Q+ + + + LR L ++ + S+
Sbjct: 57 STIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLS 116
Query: 152 FIARIRSISESLMSIGDPVAHRDLIETVLEALPEEFNPIVATVNSQTEV-ISLDELESQL 210
+ L++ G + D I +L LP ++ I+ + + +E ++L ++++L
Sbjct: 117 HFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRL 176
Query: 211 LTQEARNEKFKKALVGETASVNLTHAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSS 270
L QE + KN HN D + NN++
Sbjct: 177 LDQEIKI------------------------KNDHN--------DTSKKVMNAIVHNNNN 204
Query: 271 QYFNPNFGGRNGSRGRGFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYH 323
Y N F R + F+GN + ++C C + GH C+H
Sbjct: 205 TYKNNLFKNRVTKPKKIFKGN----------SKYKVKCHHCGREGHIKKDCFH 247
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 211 bits (536), Expect = 2e-53
Identities = 113/233 (48%), Positives = 157/233 (66%), Gaps = 13/233 (5%)
Query: 1230 FMLVYVDDILITGSSASLIQQLVKKLNAEFSLKDLGKLDYFLGIEVHYSENGSLLLSQKK 1289
++L+YVDDIL+TGSS +L+ L+ +L++ FS+KDLG + YFLGI++ +G L LSQ K
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG-LFLSQTK 60
Query: 1290 YIQDLLVKANMANANGIASPMA----SSTKLTKYGSNHVSDPTFFRSIVGGLQYVTVTRP 1345
Y + +L A M + +++P+ SS KY DP+ FRSIVG LQY+T+TRP
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-----PDPSDFRSIVGALQYLTLTRP 115
Query: 1346 EISYSVNKVCQFLSAPLEDHWKAVKRILRYLKGTIHHGLLINPAPMHQPLSLTAFCDADW 1405
+ISY+VN VCQ + P + +KR+LRY+KGTI HGL I+ + L++ AFCD+DW
Sbjct: 116 DISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK---NSKLNVQAFCDSDW 172
Query: 1406 ASDPDDRRSTSGACILLGPNLISWWAKKQTLVARSSAEAEYRSLAQASAEVLW 1458
A RRST+G C LG N+ISW AK+Q V+RSS E EYR+LA +AE+ W
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 182 bits (463), Expect = 5e-45
Identities = 108/311 (34%), Positives = 173/311 (54%), Gaps = 6/311 (1%)
Query: 1149 LDVNNAFLNGYLEEEVYMTQPPGF-EAVDPSLVCKLNKALYGLKQAPRAWFERLKSTLLK 1207
+DV+ AFLN ++E +Y+ QPPGF +P V +L +YGLKQAP W E + +TL K
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 1208 LGFCSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLKDLGKL 1267
+GFC + + L+ + ++ VYVDD+L+ S + ++ ++L +S+KDLGK+
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 1268 DYFLGIEVHYSENGSLLLSQKKYIQDLLVKANMANANGIASPMASSTKLTKYGSNHVSDP 1327
D FLG+ +H S NG + LS + YI ++ + +P+ +S L + S H+ D
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 1328 TFFRSIVGGLQYVTVT-RPEISYSVNKVCQFLSAPLEDHWKAVKRILRYLKGTIHHGLLI 1386
T ++SIVG L + T RP+ISY V+ + +FL P H ++ +R+LRYL T L
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 1387 NPAPMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLISWWAKK-QTLVARSSAEAE 1445
++LT +CDA + D ST G LL ++W +KK + ++ S EAE
Sbjct: 241 RSG---SQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 297
Query: 1446 YRSLAQASAEV 1456
Y + ++ E+
Sbjct: 298 YITASETVMEI 308
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 144 bits (362), Expect = 2e-33
Identities = 134/493 (27%), Positives = 232/493 (46%), Gaps = 37/493 (7%)
Query: 1079 DRQAVGCKWVFRTKQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTL 1138
D V +F K+N YKAR+V +G Q P Y + + ++ L +
Sbjct: 1319 DNLIVPTNTIFTKKRN-----GIYKARIVCRGDTQSPD-TYSVITTESLNHNHIKIFLMI 1372
Query: 1139 AVTNKWCIQQLDVNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWF 1198
A ++ LD+N+AFL LEEE+Y+ P D V KLNKALYGLKQ+P+ W
Sbjct: 1373 ANNRNMFMKTLDINHAFLYAKLEEEIYIPHPH-----DRRCVVKLNKALYGLKQSPKEWN 1427
Query: 1199 ERLKSTLLKLGFCSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAE 1258
+ L+ L +G + P L+ + + VYVDD +I S+ + + + KL +
Sbjct: 1428 DHLRQYLNGIGLKDNSYTPGLY--QTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSN 1485
Query: 1259 FSLKDLGKL------DYFLGIEVHYSEN-GSLLLSQKKYIQDLLVKAN--MANANGIASP 1309
F LK G L LG+++ Y++ G++ L+ K +I + K N + + P
Sbjct: 1486 FELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIP 1545
Query: 1310 MASSTKL-TKYGSNHVSDPTF------FRSIVGGLQYVT-VTRPEISYSVNKVCQFLSAP 1361
S+ K+ K +S+ F + ++G L YV R +I ++V KV + ++ P
Sbjct: 1546 HMSTYKIDPKKDVLQMSEEEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYP 1605
Query: 1362 LEDHWKAVKRILRYLKGTIHHGLLINPAPMHQPLSLTAFCDADWASDPDDRRSTSGACIL 1421
E + + +I++YL G+ + ++ + A DA S+ D +S G +
Sbjct: 1606 HERVFYMIYKIIQYLVRYKDIGIHYD-RDCNKDKKVIAITDASVGSE-YDAQSRIGVILW 1663
Query: 1422 LGPNLISWWAKKQTLVARSSAEAEYRSLAQASAEVLWIQSLLKEL-KVPTAIPQIFCDNL 1480
G N+ + ++ K T SS EAE ++ + A+ ++ LKEL + + D+
Sbjct: 1664 YGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSK 1723
Query: 1481 STVSLAHNPVLHSRTKHMELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSAS---R 1537
+ + + K + ++EK+ K + + I + +AD+LTKP+SAS R
Sbjct: 1724 PAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFKR 1783
Query: 1538 FLE-LRNKLRVSD 1549
F++ L+NK+ D
Sbjct: 1784 FIQVLKNKITSQD 1796
Score = 78.6 bits (192), Expect = 1e-13
Identities = 72/285 (25%), Positives = 120/285 (41%), Gaps = 27/285 (9%)
Query: 598 NRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSACCLGKS----HRLPSVSSKTVYNKPFE 653
N + H H+E ++K N+ +C C + K+ H S+++ + ++P
Sbjct: 575 NSIKHNHYEESLDLIKEPNEF--------WCQTCKISKATKRNHYTGSMNNHSTDHEPGS 626
Query: 654 LIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPLKLKSHTLITFQNFKTM--VELQY 711
D++GP S + Y LI VD +RY K+ I Q K + VE Q+
Sbjct: 627 SWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQYVETQF 686
Query: 712 NLPIKSVQTDGGGEFR--PFTQFLTTLGITHRLTCPHTHHQNGSVERKHRHIVETGLTLL 769
+ ++ + +D G EF ++ + GI H LT H NG ER R I+ TLL
Sbjct: 687 DRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIITDATTLL 746
Query: 770 ANAKLPLHYWDHAFLTATYLINRLPSPILNNKSPFFLLHLQIPDYKFLKSFGCSCFPFTR 829
+ L + +W++A +AT + N L K P + Q + + S PF
Sbjct: 747 RQSNLRVKFWEYAVTSATNIRNYLEHK-STGKLPLKAISRQPVTVRLM-----SFLPFGE 800
Query: 830 P-----YNNHKLELRSKECVFLGYSPSHKGYKCLDPTGRMFISKD 869
+N+ KL+ + L P+ GYK P+ ++ D
Sbjct: 801 KGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKIVTSD 845
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 139 bits (350), Expect = 6e-32
Identities = 171/717 (23%), Positives = 307/717 (41%), Gaps = 75/717 (10%)
Query: 888 SSSPPTTSSDHTPLP-SFLFPLNNKQCPTTQSSSTPTTTLHTA-SPHSSFPESNQSNHHH 945
S S ++HT +P S NNK P T +H + S +S PE+N S++
Sbjct: 624 SDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIV 683
Query: 946 SIQDTHASSHSNHH----------NISP-GPIFNPTPISTHPPSPSPSSHSH-------N 987
I+ S N ++ P P P P PP S ++S N
Sbjct: 684 PIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKELPPINSRQTNSSLGGIGDSN 743
Query: 988 TYHSISVEPVTSQPSTQAEPHRIHPNNTHSMAT----RAKHGI--------VQKRKHPTL 1035
Y +I+ + + + + NT +M + R+K I V+ K
Sbjct: 744 AYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRT 803
Query: 1036 LLTHIEPTGYRQAMKQPQ-WLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFRT--- 1091
L + E Y + +K+ + ++QA E L+K TW DR+ + K V +
Sbjct: 804 TLRYDEAITYNKDIKEKEKYIQAYHKEVNQLLKMKTWD-TDRYYDRKEIDPKRVINSMFI 862
Query: 1092 -KQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVR-----SVLTLAVTNKWC 1145
+ DG+ +KAR VA+G Q P +T+ P ++ TV + L+LA+ N +
Sbjct: 863 FNRKRDGT---HKARFVARGDIQHP-----DTYDPGMQSNTVHHYALMTSLSLALDNNYY 914
Query: 1146 IQQLDVNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWFERLKSTL 1205
I QLD+++A+L ++EE+Y+ PP D + +L K+LYGLKQ+ W+E +KS L
Sbjct: 915 ITQLDISSAYLYADIKEELYIRPPPHLGMNDK--LIRLKKSLYGLKQSGANWYETIKSYL 972
Query: 1206 LKLGFCSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLK--D 1263
+K C + + N T L +VDD+++ + ++++ L ++ K +
Sbjct: 973 IKQ--CGMEEVRGWSCVFKNSQVTICL-FVDDMILFSKDLNANKKIITTLKKQYDTKIIN 1029
Query: 1264 LGKLDY-----FLGIEVHYSENGSLLLSQKKYIQDLLVKANM--------ANANGIASPM 1310
LG+ D LG+E+ Y + L + + + + K N+ +A G
Sbjct: 1030 LGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLY 1089
Query: 1311 ASSTKLTKYGSNHVSDPTFFRSIVGGLQYVTVT-RPEISYSVNKVCQFLSAPLEDHWKAV 1369
+L ++ + ++G YV R ++ Y +N + Q + P +
Sbjct: 1090 IDQQELELEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMT 1149
Query: 1370 KRILRYLKGTIHHGLLINPA-PMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLIS 1428
+++++ T L+ + + P+ L DA + + P +S G LL +I
Sbjct: 1150 YELIQFIWNTRDKQLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIG 1208
Query: 1429 WWAKKQTLVARSSAEAEYRSLAQASAEVLWIQSLLKELKVPTAIPQIFCDNLSTVS-LAH 1487
+ K +L S+ EAE +++++ + + L++EL + D+ ST+S +
Sbjct: 1209 GKSTKASLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIIS 1268
Query: 1488 NPVLHSRTKHMELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSASRFLELRNK 1544
N R + +R++V L V +I + +AD++TKPL F L NK
Sbjct: 1269 NNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 87.4 bits (215), Expect = 3e-16
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 60/398 (15%)
Query: 414 DSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNL 473
DSGA+ + A+++ A+S + + + + IN+IG + F F NT ++ +
Sbjct: 34 DSGASRTLIRSAHHIHSASS-NPDINVVDAQKRNIPINAIGDLQFH--FQDNTKTSIK-V 89
Query: 474 LHVPSITKNLVSVSQFCKDNNVFFEFHSNICYVKSQDSTKILLKGHLGDDGLYQFDQPYV 533
LH P+I +L+S+++ + + F N+ ++ D T + GD Y + Y+
Sbjct: 90 LHTPNIAYDLLSLNELAAVD-ITACFTKNV--LERSDGTVLAPIVKYGD--FYWVSKKYL 144
Query: 534 PSVSRTASSSSVATSSLSLNNCFSPSSLSLSRSQCNNGSVYTPIHTSGSSNDSSNSLSLY 593
S+ SV T +NN +HTS S+ Y
Sbjct: 145 -----LPSNISVPT----INN----------------------VHTSESTRKYP-----Y 168
Query: 594 KVWHNRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSA-------CCLGKS--HRLPSVSS 644
H L H + + +R +K N+S D+ SA C +GKS HR S
Sbjct: 169 PFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSR 228
Query: 645 KTVYN--KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPL--KLKSHTLITF 700
N +PF+ + D++GP SYF+ D +++ W++PL + + L F
Sbjct: 229 LKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVF 288
Query: 701 QNFKTMVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKH 758
++ Q+ + +Q D G E+ R +FL GIT T +G ER +
Sbjct: 289 TTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLN 348
Query: 759 RHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSP 796
R +++ T L + LP H W A +T + N L SP
Sbjct: 349 RTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASP 386
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 139 bits (350), Expect = 6e-32
Identities = 168/712 (23%), Positives = 300/712 (41%), Gaps = 65/712 (9%)
Query: 888 SSSPPTTSSDHTPLP-SFLFPLNNKQCPTTQSSSTPTTTLHTASPHSSFPESNQSNHHH- 945
S S ++HT +P S NNK P T +H + + P N S+H+
Sbjct: 624 SDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIV 683
Query: 946 --SIQDTHASSHSNHHNISPGPIFNPTPIS-THPPSPS---PSSHSHNTYHSIS-VEPVT 998
T + ++ I+ P+ + P S T P P P +SH T S+ +
Sbjct: 684 PIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKELPPINSHQTNSSLGGIGDSN 743
Query: 999 SQPSTQAEPHRIHPN-----------NTHSMAT----RAKHGI--------VQKRKHPTL 1035
+ + ++ + N NT +M + R+K I V+ K
Sbjct: 744 AYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRT 803
Query: 1036 LLTHIEPTGYRQAMKQPQ-WLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFRT--- 1091
L + E Y + +K+ + +++A E L+K NTW DR+ + K V +
Sbjct: 804 TLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMNTWDTDKY-YDRKEIDPKRVINSMFI 862
Query: 1092 -KQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTLAVTNKWCIQQLD 1150
+ DG+ +KAR VA+G Q P S V + + L+LA+ N + I QLD
Sbjct: 863 FNRKRDGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLD 919
Query: 1151 VNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWFERLKSTLLKLGF 1210
+++A+L ++EE+Y+ PP D + +L K+LYGLKQ+ W+E +KS L+K
Sbjct: 920 ISSAYLYADIKEELYIRPPPHLGMNDK--LIRLKKSLYGLKQSGANWYETIKSYLIKQ-- 975
Query: 1211 CSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLK--DLGKLD 1268
C + + N T L +VDD+++ + ++++ L ++ K +LG+ D
Sbjct: 976 CGMEEVRGWSCVFKNSQVTICL-FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESD 1034
Query: 1269 Y-----FLGIEVHYSENGSLLLSQKKYIQDLLVKANM--------ANANGIASPMASSTK 1315
LG+E+ Y + L + + + + K N+ +A G +
Sbjct: 1035 NEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDE 1094
Query: 1316 LTKYGSNHVSDPTFFRSIVGGLQYVTVT-RPEISYSVNKVCQFLSAPLEDHWKAVKRILR 1374
L + + ++G YV R ++ Y +N + Q + P +++
Sbjct: 1095 LEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQ 1154
Query: 1375 YLKGTIHHGLLINP-APMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLISWWAKK 1433
++ T L+ + P L A DA + + P +S G LL +I + K
Sbjct: 1155 FMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTK 1213
Query: 1434 QTLVARSSAEAEYRSLAQASAEVLWIQSLLKELKVPTAIPQIFCDNLSTVS-LAHNPVLH 1492
+L S+ EAE +++++ + + L++EL + D+ ST+S + N
Sbjct: 1214 ASLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEK 1273
Query: 1493 SRTKHMELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSASRFLELRNK 1544
R + +R++V L V +I + +AD++TKPL F L NK
Sbjct: 1274 FRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 87.4 bits (215), Expect = 3e-16
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 60/398 (15%)
Query: 414 DSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNL 473
DSGA+ + A+++ A+S + + + + IN+IG + F F NT ++ +
Sbjct: 34 DSGASRTLIRSAHHIHSASS-NPDINVVDAQKRNIPINAIGDLQFH--FQDNTKTSIK-V 89
Query: 474 LHVPSITKNLVSVSQFCKDNNVFFEFHSNICYVKSQDSTKILLKGHLGDDGLYQFDQPYV 533
LH P+I +L+S+++ + + F N+ ++ D T + GD Y + Y+
Sbjct: 90 LHTPNIAYDLLSLNELAAVD-ITACFTKNV--LERSDGTVLAPIVKYGD--FYWVSKKYL 144
Query: 534 PSVSRTASSSSVATSSLSLNNCFSPSSLSLSRSQCNNGSVYTPIHTSGSSNDSSNSLSLY 593
S+ SV T +NN +HTS S+ Y
Sbjct: 145 -----LPSNISVPT----INN----------------------VHTSESTRKYP-----Y 168
Query: 594 KVWHNRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSA-------CCLGKS--HRLPSVSS 644
H L H + + +R +K N+S D+ SA C +GKS HR S
Sbjct: 169 PFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSR 228
Query: 645 KTVYN--KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPL--KLKSHTLITF 700
N +PF+ + D++GP SYF+ D +++ W++PL + + L F
Sbjct: 229 LKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVF 288
Query: 701 QNFKTMVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKH 758
++ Q+ + +Q D G E+ R +FL GIT T +G ER +
Sbjct: 289 TTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLN 348
Query: 759 RHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSP 796
R +++ T L + LP H W A +T + N L SP
Sbjct: 349 RTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASP 386
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 139 bits (350), Expect = 6e-32
Identities = 167/712 (23%), Positives = 301/712 (41%), Gaps = 65/712 (9%)
Query: 888 SSSPPTTSSDHTPLP-SFLFPLNNKQCPTTQSSSTPTTTLHTASPHSSFPESNQSNHHH- 945
S S ++HT +P S NNK P T +H + + P N S+H+
Sbjct: 624 SDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIV 683
Query: 946 --SIQDTHASSHSNHHNISPGPIFNPTPIS-THPPSPS---PSSHSHNTYHSIS-VEPVT 998
T + ++ I+ P+ + P S T P P P +SH T S+ +
Sbjct: 684 PIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKELPPINSHQTNSSLGGIGDSN 743
Query: 999 SQPSTQAEPHRIHPN-----------NTHSMAT----RAKHGI--------VQKRKHPTL 1035
+ + ++ + N NT +M + R+K I V+ K
Sbjct: 744 AYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRT 803
Query: 1036 LLTHIEPTGYRQAMKQPQ-WLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFRT--- 1091
L + E Y + +K+ + +++A E L+K TW DR+ + K V +
Sbjct: 804 TLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFI 862
Query: 1092 -KQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTLAVTNKWCIQQLD 1150
+ DG+ +KAR VA+G Q P S V + + L+LA+ N + I QLD
Sbjct: 863 FNKKRDGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLD 919
Query: 1151 VNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWFERLKSTLLKLGF 1210
+++A+L ++EE+Y+ PP D + +L K+LYGLKQ+ W+E +KS L+K
Sbjct: 920 ISSAYLYADIKEELYIRPPPHLGMNDK--LIRLKKSLYGLKQSGANWYETIKSYLIKQ-- 975
Query: 1211 CSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLK--DLGKLD 1268
C + + N T L +VDD+++ + ++++ L ++ K +LG+ D
Sbjct: 976 CGMEEVRGWSCVFKNSQVTICL-FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESD 1034
Query: 1269 Y-----FLGIEVHYSENGSLLLSQKKYIQDLLVKANM--------ANANGIASPMASSTK 1315
LG+E+ Y + L + + + + K N+ +A G +
Sbjct: 1035 NEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDE 1094
Query: 1316 LTKYGSNHVSDPTFFRSIVGGLQYVTVT-RPEISYSVNKVCQFLSAPLEDHWKAVKRILR 1374
L + + ++G YV R ++ Y +N + Q + P +++
Sbjct: 1095 LEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQ 1154
Query: 1375 YLKGTIHHGLLINP-APMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLISWWAKK 1433
++ T L+ + P L A DA + + P +S G LL +I + K
Sbjct: 1155 FMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTK 1213
Query: 1434 QTLVARSSAEAEYRSLAQASAEVLWIQSLLKELKVPTAIPQIFCDNLSTVSLAHNPVLHS 1493
+L S+ EAE +++++ + + L++EL I + D+ ST+S+ +
Sbjct: 1214 ASLTCTSTTEAEIHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNEEK 1273
Query: 1494 -RTKHMELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSASRFLELRNK 1544
R + +R++V +L V +I + +AD++TKPL F L NK
Sbjct: 1274 FRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 85.9 bits (211), Expect = 8e-16
Identities = 100/398 (25%), Positives = 167/398 (41%), Gaps = 60/398 (15%)
Query: 414 DSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNL 473
DSGA+ + A+++ A+S + + + + IN+IG + F F NT ++ +
Sbjct: 34 DSGASRTLIRSAHHIHSASS-NPDINVVDAQKRNIPINAIGDLQFH--FQDNTKTSIK-V 89
Query: 474 LHVPSITKNLVSVSQFCKDNNVFFEFHSNICYVKSQDSTKILLKGHLGDDGLYQFDQPYV 533
LH P+I +L+S+++ + + F N+ ++ D T + GD Y + Y+
Sbjct: 90 LHTPNIAYDLLSLNELAAVD-ITACFTKNV--LERSDGTVLAPIVKYGD--FYWVSKKYL 144
Query: 534 PSVSRTASSSSVATSSLSLNNCFSPSSLSLSRSQCNNGSVYTPIHTSGSSNDSSNSLSLY 593
S+ SV T +NN +HTS S+ Y
Sbjct: 145 -----LPSNISVPT----INN----------------------VHTSESTRKYP-----Y 168
Query: 594 KVWHNRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSA-------CCLGKS--HRLPSVSS 644
H L H + + +R +K N+S D SA C +GKS HR S
Sbjct: 169 PFIHRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQCPDCLIGKSTKHRHIKGSR 228
Query: 645 KTVYN--KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPL--KLKSHTLITF 700
N +PF+ + D++GP SYF+ D +++ W++PL + + L F
Sbjct: 229 LKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVF 288
Query: 701 QNFKTMVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKH 758
++ Q+ + +Q D G E+ R +FL GIT T +G ER +
Sbjct: 289 TTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLN 348
Query: 759 RHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSP 796
R +++ T L + LP H W A +T + N L SP
Sbjct: 349 RTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASP 386
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 138 bits (348), Expect = 1e-31
Identities = 168/716 (23%), Positives = 301/716 (41%), Gaps = 73/716 (10%)
Query: 888 SSSPPTTSSDHTPLP-SFLFPLNNKQCPTTQSSSTPTTTLHTA-SPHSSFPESNQSNHHH 945
S S ++HT +P S NNK P T T +H + S +S ESN +H
Sbjct: 624 SDSYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVV 683
Query: 946 SIQDTHASSHSNHHNISPGPIFNPTPISTHPPSPS----------PSSHSHNTYHSIS-V 994
I+ + N I P+ PP P P +S T S+ +
Sbjct: 684 PIKTSDTCPKENTEE----SIIADLPLPDLPPEPPTELSDSFKELPPINSRQTNSSLGGI 739
Query: 995 EPVTSQPSTQAEPHRIHPN-----------NTHSMAT----RAKHGI--------VQKRK 1031
+ + ++ + N NT +M + R+K I V+ K
Sbjct: 740 GDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIK 799
Query: 1032 HPTLLLTHIEPTGYRQAMKQPQ-WLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFR 1090
L + E Y + +K+ + +++A E L+K TW DR+ + K V
Sbjct: 800 PIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDKY-YDRKEIDPKRVIN 858
Query: 1091 T----KQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTLAVTNKWCI 1146
+ + DG+ +KAR VA+G Q P S V + + L+LA+ N + I
Sbjct: 859 SMFIFNRKRDGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYI 915
Query: 1147 QQLDVNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWFERLKSTLL 1206
QLD+++A+L ++EE+Y+ PP D + +L K+LYGLKQ+ W+E +KS L+
Sbjct: 916 TQLDISSAYLYADIKEELYIRPPPHLGMNDK--LIRLKKSLYGLKQSGANWYETIKSYLI 973
Query: 1207 KLGFCSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLK--DL 1264
K C + + N T L +VDD+++ + + ++++ KL ++ K +L
Sbjct: 974 KQ--CGMEEVRGWSCVFENSQVTICL-FVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINL 1030
Query: 1265 GKLDY-----FLGIEVHYSENGSLLLSQKKYIQDLLVKANM--------ANANGIASPMA 1311
G+ D LG+E+ Y + L + + + + K N+ +A G
Sbjct: 1031 GESDEEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYI 1090
Query: 1312 SSTKLTKYGSNHVSDPTFFRSIVGGLQYVTVT-RPEISYSVNKVCQFLSAPLEDHWKAVK 1370
+L ++ + ++G YV R ++ Y +N + Q + P +
Sbjct: 1091 DQQELELEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTY 1150
Query: 1371 RILRYLKGTIHHGLLINPA-PMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLISW 1429
+++++ T L+ + + P+ L DA + + P +S G LL +I
Sbjct: 1151 ELIQFIWNTRDKQLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGG 1209
Query: 1430 WAKKQTLVARSSAEAEYRSLAQASAEVLWIQSLLKELKVPTAIPQIFCDNLSTVS-LAHN 1488
+ K +L S+ EAE +++++ + + L++EL + D+ ST+S + N
Sbjct: 1210 KSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISN 1269
Query: 1489 PVLHSRTKHMELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSASRFLELRNK 1544
R + +R++V L V +I + +AD++TKPL F L NK
Sbjct: 1270 NEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 87.4 bits (215), Expect = 3e-16
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 60/398 (15%)
Query: 414 DSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNL 473
DSGA+ + A+++ A+S + + + + IN+IG + F F NT ++ +
Sbjct: 34 DSGASRTLIRSAHHIHSASS-NPDINVVDAQKRNIPINAIGDLQFH--FQDNTKTSIK-V 89
Query: 474 LHVPSITKNLVSVSQFCKDNNVFFEFHSNICYVKSQDSTKILLKGHLGDDGLYQFDQPYV 533
LH P+I +L+S+++ + + F N+ ++ D T + GD Y + Y+
Sbjct: 90 LHTPNIAYDLLSLNELAAVD-ITACFTKNV--LERSDGTVLAPIVKYGD--FYWVSKKYL 144
Query: 534 PSVSRTASSSSVATSSLSLNNCFSPSSLSLSRSQCNNGSVYTPIHTSGSSNDSSNSLSLY 593
S+ SV T +NN +HTS S+ Y
Sbjct: 145 -----LPSNISVPT----INN----------------------VHTSESTRKYP-----Y 168
Query: 594 KVWHNRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSA-------CCLGKS--HRLPSVSS 644
H L H + + +R +K N+S D+ SA C +GKS HR S
Sbjct: 169 PFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSR 228
Query: 645 KTVYN--KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPL--KLKSHTLITF 700
N +PF+ + D++GP SYF+ D +++ W++PL + + L F
Sbjct: 229 LKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVF 288
Query: 701 QNFKTMVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKH 758
++ Q+ + +Q D G E+ R +FL GIT T +G ER +
Sbjct: 289 TTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLN 348
Query: 759 RHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSP 796
R +++ T L + LP H W A +T + N L SP
Sbjct: 349 RTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASP 386
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 138 bits (347), Expect = 1e-31
Identities = 168/712 (23%), Positives = 305/712 (42%), Gaps = 65/712 (9%)
Query: 888 SSSPPTTSSDHTPLP-SFLFPLNNKQCPTTQSSSTPTTTLHTA-SPHSSFPESNQSNHHH 945
S S ++HT +P S NNK P T +H + S +S PE+N S++
Sbjct: 1051 SDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIV 1110
Query: 946 SIQDTHASSHSNHH----------NISP-GPIFNPTPISTHPPSPSPSSHSH-------N 987
I+ S N ++ P P P P PP S ++S N
Sbjct: 1111 PIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKELPPINSRQTNSSLGGIGDSN 1170
Query: 988 TYHSISVEPVTSQPSTQAEPHRIHPNNTHSMAT----RAKHGI--------VQKRKHPTL 1035
Y +I+ + + + + NT +M + R+K I V+ K
Sbjct: 1171 AYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRT 1230
Query: 1036 LLTHIEPTGYRQAMKQPQ-WLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFRT--- 1091
L + E Y + +K+ + +++A E L+K TW DR+ + K V +
Sbjct: 1231 TLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFI 1289
Query: 1092 -KQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTLAVTNKWCIQQLD 1150
+ DG+ +KAR VA+G Q P S V + + L+LA+ N + I QLD
Sbjct: 1290 FNKKRDGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLD 1346
Query: 1151 VNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWFERLKSTLLKLGF 1210
+++A+L ++EE+Y+ PP D + +L K+LYGLKQ+ W+E +KS L++
Sbjct: 1347 ISSAYLYADIKEELYIRPPPHLGMNDK--LIRLKKSLYGLKQSGANWYETIKSYLIQQ-- 1402
Query: 1211 CSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLK--DLGKLD 1268
C + + N T L +VDD+++ + + +++++KL ++ K +LG+ D
Sbjct: 1403 CGMEEVRGWSCVFKNSQVTICL-FVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGESD 1461
Query: 1269 Y-----FLGIEVHYSENGSLLLSQKKYIQDLLVKANM--------ANANGIASPMASSTK 1315
LG+E+ Y + L + + + + K N+ +A G +
Sbjct: 1462 EEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQE 1521
Query: 1316 LTKYGSNHVSDPTFFRSIVGGLQYVTVT-RPEISYSVNKVCQFLSAPLEDHWKAVKRILR 1374
L ++ + ++G YV R ++ Y +N + Q + P + +++
Sbjct: 1522 LELEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQ 1581
Query: 1375 YLKGTIHHGLLINPA-PMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLISWWAKK 1433
++ T L+ + + P+ L DA + + P +S G LL +I + K
Sbjct: 1582 FIWNTRDKQLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTK 1640
Query: 1434 QTLVARSSAEAEYRSLAQASAEVLWIQSLLKELKVPTAIPQIFCDNLSTVS-LAHNPVLH 1492
+L S+ EAE +++++ + + L++EL + D+ ST+S + N
Sbjct: 1641 ASLTCTSTTEAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNEEK 1700
Query: 1493 SRTKHMELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSASRFLELRNK 1544
R + +R++V L V +I + +AD++TKPL F L NK
Sbjct: 1701 FRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNK 1752
Score = 87.4 bits (215), Expect = 3e-16
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 60/398 (15%)
Query: 414 DSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNL 473
DSGA+ + A+++ A+S + + + + IN+IG + F F NT ++ +
Sbjct: 461 DSGASRTLIRSAHHIHSASS-NPDINVVDAQKRNIPINAIGDLQFH--FQDNTKTSIK-V 516
Query: 474 LHVPSITKNLVSVSQFCKDNNVFFEFHSNICYVKSQDSTKILLKGHLGDDGLYQFDQPYV 533
LH P+I +L+S+++ + + F N+ ++ D T + GD Y + Y+
Sbjct: 517 LHTPNIAYDLLSLNELAAVD-ITACFTKNV--LERSDGTVLAPIVKYGD--FYWVSKKYL 571
Query: 534 PSVSRTASSSSVATSSLSLNNCFSPSSLSLSRSQCNNGSVYTPIHTSGSSNDSSNSLSLY 593
S+ SV T +NN +HTS S+ Y
Sbjct: 572 -----LPSNISVPT----INN----------------------VHTSESTRKYP-----Y 595
Query: 594 KVWHNRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSA-------CCLGKS--HRLPSVSS 644
H L H + + +R +K N+S D+ SA C +GKS HR S
Sbjct: 596 PFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSR 655
Query: 645 KTVYN--KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPL--KLKSHTLITF 700
N +PF+ + D++GP SYF+ D +++ W++PL + + L F
Sbjct: 656 LKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVF 715
Query: 701 QNFKTMVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKH 758
++ Q+ + +Q D G E+ R +FL GIT T +G ER +
Sbjct: 716 TTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLN 775
Query: 759 RHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSP 796
R +++ T L + LP H W A +T + N L SP
Sbjct: 776 RTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASP 813
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 136 bits (343), Expect = 4e-31
Identities = 166/712 (23%), Positives = 300/712 (41%), Gaps = 65/712 (9%)
Query: 888 SSSPPTTSSDHTPLP-SFLFPLNNKQCPTTQSSSTPTTTLHTASPHSSFPESNQSNHHH- 945
S S ++HT +P S NNK P T +H + + P N S+H+
Sbjct: 1051 SDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIV 1110
Query: 946 --SIQDTHASSHSNHHNISPGPIFNPTPIS-THPPSPS---PSSHSHNTYHSIS-VEPVT 998
T + ++ I+ P+ + P S T P P P +SH T S+ +
Sbjct: 1111 PIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKELPPINSHQTNSSLGGIGDSN 1170
Query: 999 SQPSTQAEPHRIHPN-----------NTHSMAT----RAKHGI--------VQKRKHPTL 1035
+ + ++ + N NT +M + R+K I V+ K
Sbjct: 1171 AYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRT 1230
Query: 1036 LLTHIEPTGYRQAMKQPQ-WLQAMQLEHEALMKNNTWTLVPLPADRQAVGCKWVFRT--- 1091
L + E Y + +K+ + +++A E L+K TW DR+ + K V +
Sbjct: 1231 TLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFI 1289
Query: 1092 -KQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRSVLTLAVTNKWCIQQLD 1150
+ DG+ +KAR VA+G Q P S V + + L+LA+ N + I QLD
Sbjct: 1290 FNKKRDGT---HKARFVARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLD 1346
Query: 1151 VNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKLNKALYGLKQAPRAWFERLKSTLLKLGF 1210
+++A+L ++EE+Y+ PP D + +L K+ YGLKQ+ W+E +KS L+K
Sbjct: 1347 ISSAYLYADIKEELYIRPPPHLGMNDK--LIRLKKSHYGLKQSGANWYETIKSYLIKQ-- 1402
Query: 1211 CSSKCDPSLFILHANQHSTFMLVYVDDILITGSSASLIQQLVKKLNAEFSLK--DLGKLD 1268
C + + N T L +VDD+++ + ++++ L ++ K +LG+ D
Sbjct: 1403 CGMEEVRGWSCVFKNSQVTICL-FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESD 1461
Query: 1269 Y-----FLGIEVHYSENGSLLLSQKKYIQDLLVKANM--------ANANGIASPMASSTK 1315
LG+E+ Y + L + + + + K N+ +A G +
Sbjct: 1462 NEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDE 1521
Query: 1316 LTKYGSNHVSDPTFFRSIVGGLQYVTVT-RPEISYSVNKVCQFLSAPLEDHWKAVKRILR 1374
L + + ++G YV R ++ Y +N + Q + P +++
Sbjct: 1522 LEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQ 1581
Query: 1375 YLKGTIHHGLLINP-APMHQPLSLTAFCDADWASDPDDRRSTSGACILLGPNLISWWAKK 1433
++ T L+ + P L A DA + + P +S G LL +I + K
Sbjct: 1582 FMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTK 1640
Query: 1434 QTLVARSSAEAEYRSLAQASAEVLWIQSLLKELKVPTAIPQIFCDNLSTVSLAHNPVLHS 1493
+L S+ EAE +++++ + + L++EL I + D+ ST+S+ +
Sbjct: 1641 ASLTCTSTTEAEIHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNEEK 1700
Query: 1494 -RTKHMELDIFFVREKVISKDLIVSHIPAQYQVADILTKPLSASRFLELRNK 1544
R + +R++V +L V +I + +AD++TKPL F L NK
Sbjct: 1701 FRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1752
Score = 87.4 bits (215), Expect = 3e-16
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 60/398 (15%)
Query: 414 DSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNL 473
DSGA+ + A+++ A+S + + + + IN+IG + F F NT ++ +
Sbjct: 461 DSGASRTLIRSAHHIHSASS-NPDINVVDAQKRNIPINAIGDLQFH--FQDNTKTSIK-V 516
Query: 474 LHVPSITKNLVSVSQFCKDNNVFFEFHSNICYVKSQDSTKILLKGHLGDDGLYQFDQPYV 533
LH P+I +L+S+++ + + F N+ ++ D T + GD Y + Y+
Sbjct: 517 LHTPNIAYDLLSLNELAAVD-ITACFTKNV--LERSDGTVLAPIVQYGD--FYWVSKRYL 571
Query: 534 PSVSRTASSSSVATSSLSLNNCFSPSSLSLSRSQCNNGSVYTPIHTSGSSNDSSNSLSLY 593
S+ SV T +NN +HTS S+ Y
Sbjct: 572 -----LPSNISVPT----INN----------------------VHTSESTRKYP-----Y 595
Query: 594 KVWHNRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSA-------CCLGKS--HRLPSVSS 644
H L H + + +R +K N+S D+ SA C +GKS HR S
Sbjct: 596 PFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSR 655
Query: 645 KTVYN--KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPL--KLKSHTLITF 700
N +PF+ + D++GP SYF+ D +++ W++PL + + L F
Sbjct: 656 LKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVF 715
Query: 701 QNFKTMVELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKH 758
++ Q+ + +Q D G E+ R +FL GIT T +G ER +
Sbjct: 716 TTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLN 775
Query: 759 RHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSP 796
R +++ T L + LP H W A +T + N L SP
Sbjct: 776 RTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASP 813
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 135 bits (340), Expect = 9e-31
Identities = 162/679 (23%), Positives = 282/679 (40%), Gaps = 52/679 (7%)
Query: 891 PPTTSSDHTPLPSFLFPLNNKQCPTTQS--SSTPTTTLHTASPHSSFPESNQSNHHHSIQ 948
P SSDH P+ + P + + T S P L SP + S H HS Q
Sbjct: 1116 PEYRSSDHAT-PNIM-PDKSSKNVTADSILDDLPLPDLTHQSPTDTSDVSKDIPHIHSRQ 1173
Query: 949 DTHASSHSNHHNISPGPIFNPTPISTHPPSPSPSSHSHNTYHSISVEPVTSQPSTQAEPH 1008
+ + N+ T S S + T +S + ++ EP
Sbjct: 1174 TNSSLGGMDDSNVL-----------TTTKSKKRSLEDNETEIEVSRDTWNNKNMRSLEPP 1222
Query: 1009 RIHPNNTHSMATRAKHGIVQKRKHPTLLLTHIEPTGYRQAMKQP-QWLQAMQLEHEALMK 1067
R A + V+ K L + E Y + K+ ++++A E L+K
Sbjct: 1223 RSKKRINLIAAIKG----VKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLK 1278
Query: 1068 NNTWTLVPLPADRQAVGCKWVFRT----KQNPDGSINKYKARLVAKGFHQMPGFDYKETF 1123
NTW DR + K V + + DG+ +KAR VA+G Q P +
Sbjct: 1279 MNTWDTNKY-YDRNDIDPKKVINSMFIFNKKRDGT---HKARFVARGDIQHPDTYDSDMQ 1334
Query: 1124 SPVVKPVTVRSVLTLAVTNKWCIQQLDVNNAFLNGYLEEEVYMTQPPGFEAVDPSLVCKL 1183
S V + + L++A+ N + I QLD+++A+L ++EE+Y+ PP D L +L
Sbjct: 1335 SNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLL--RL 1392
Query: 1184 NKALYGLKQAPRAWFERLKSTLLKLGFCSSKCDPSLFILHANQHSTFMLVYVDDILITGS 1243
K+LYGLKQ+ W+E +KS L+ C + + N T L +VDD+++
Sbjct: 1393 RKSLYGLKQSGANWYETIKSYLINC--CDMQEVRGWSCVFKNSQVTICL-FVDDMILFSK 1449
Query: 1244 SASLIQQLVKKLNAEFSLK--DLGKLDY-----FLGIEVHYSENGSLLLSQKKYIQDLLV 1296
+ ++++ L ++ K +LG+ D LG+E+ Y + + L +K + + L
Sbjct: 1450 DLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLP 1509
Query: 1297 KANM--------ANANGIASPMASSTKLTKYGSNHVSDPTFFRSIVGGLQYVTVT-RPEI 1347
K N+ A G +L + + ++G YV R ++
Sbjct: 1510 KLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDL 1569
Query: 1348 SYSVNKVCQFLSAPLEDHWKAVKRILRYLKGTIHHGLLINP-APMHQPLSLTAFCDADWA 1406
Y +N + Q + P +++++ T L+ + P L A DA +
Sbjct: 1570 LYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYG 1629
Query: 1407 SDPDDRRSTSGACILLGPNLISWWAKKQTLVARSSAEAEYRSLAQASAEVLWIQSLLKEL 1466
+ P +S G LL +I + K +L S+ EAE ++++A + + L++EL
Sbjct: 1630 NQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQEL 1688
Query: 1467 KVPTAIPQIFCDNLSTVSLAHNPVLHS-RTKHMELDIFFVREKVISKDLIVSHIPAQYQV 1525
I + D+ ST+S+ + R + +R++V +L V +I + +
Sbjct: 1689 NKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNI 1748
Query: 1526 ADILTKPLSASRFLELRNK 1544
AD++TKPL F L NK
Sbjct: 1749 ADVMTKPLPIKTFKLLTNK 1767
Score = 93.6 bits (231), Expect = 4e-18
Identities = 106/397 (26%), Positives = 172/397 (42%), Gaps = 67/397 (16%)
Query: 419 HHVTPDAN-NLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFSPNTTLTLNNLLHVP 477
HH TP++ N++DA Q + IN+IG++ F+ N T T LH P
Sbjct: 472 HHATPNSEINIVDAQK------------QDIPINAIGNLHFNFQ---NGTKTSIKALHTP 516
Query: 478 SITKNLVSVSQFCKDNNVFFEFHSNICYVKS--QDSTKILLKGHLGDDGLYQFDQPY-VP 534
+I +L+S+S+ N C+ ++ + S +L + Y + Y +P
Sbjct: 517 NIAYDLLSLSELANQN-------ITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIP 569
Query: 535 SVSRTASSSSVATSSLSLNNCFSPSSLSLSRSQCNNGSVYTPIHTS-GSSNDSSNSLSLY 593
S S L++NN +++S+ N Y IH G +N S SL
Sbjct: 570 S----------HISKLTINN--------VNKSKSVNKYPYPLIHRMLGHANFRSIQKSLK 611
Query: 594 KVWHNRLGHPHHEVVRSVMKLCNQQLPNKSFTDFCSACCLGKSHRLPSV-SSKTVYN--- 649
K N + + +K + + N S T C C +GKS + V S+ Y
Sbjct: 612 K---NAV---------TYLKESDIEWSNAS-TYQCPDCLIGKSTKHRHVKGSRLKYQESY 658
Query: 650 KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPL--KLKSHTLITFQNFKTMV 707
+PF+ + D++GP SYF+ D +R+ W++PL + + L F + +
Sbjct: 659 EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFI 718
Query: 708 ELQYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGSVERKHRHIVETG 765
+ Q+N + +Q D G E+ + +F T GIT T +G ER +R ++
Sbjct: 719 KNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDC 778
Query: 766 LTLLANAKLPLHYWDHAFLTATYLINRLPSPILNNKS 802
TLL + LP H W A +T + N L SP N+KS
Sbjct: 779 RTLLHCSGLPNHLWFSAVEFSTIIRNSLVSP-KNDKS 814
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 120 bits (301), Expect = 3e-26
Identities = 64/140 (45%), Positives = 89/140 (62%), Gaps = 10/140 (7%)
Query: 1018 MATRAKHGIVQKRKHPTLLLTHI---EPTGYRQAMKQPQWLQAMQLEHEALMKNNTWTLV 1074
M TR+K GI + +L +T EP A+K P W QAMQ E +AL +N TW LV
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60
Query: 1075 PLPADRQAVGCKWVFRTKQNPDGSINKYKARLVAKGFHQMPGFDYKETFSPVVKPVTVRS 1134
P P ++ +GCKWVF+TK + DG++++ KARLVAKGFHQ G + ET+SPVV+ T+R+
Sbjct: 61 PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120
Query: 1135 VLTLAVTNKWCIQQLDVNNA 1154
+L +A QQL+V +
Sbjct: 121 ILNVA-------QQLEVGQS 133
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 77.0 bits (188), Expect = 4e-13
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 1339 YVTVTRPEISYSVNKVCQFLSAPLEDHWKAVKRILRYLKGTIHHGLLINPAPMHQPLSLT 1398
Y+T+TRP+++++VN++ QF SA +AV ++L Y+KGT+ GL + L L
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSAT---SDLQLK 58
Query: 1399 AFCDADWASDPDDRRSTSGACILL 1422
AF D+DWAS PD RRS +G C L+
Sbjct: 59 AFADSDWASCPDTRRSVTGFCSLV 82
>HORN_HUMAN (Q86YZ3) Hornerin
Length = 2850
Score = 59.7 bits (143), Expect = 6e-08
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 18/232 (7%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGR-GFRGNRF 293
H SG+ +G++Q +GS + G+ +G +S + + G + S G+ G ++
Sbjct: 703 HKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQS 762
Query: 294 RGRGGRNFGRGNIQCQICY--KTGHDASICYHRLSVPPQYEGYGSLGGNFGGNLGSGYGP 351
G G + G G+ ++ + +GH +S H G G+ + G+ SG G
Sbjct: 763 SGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQH---------GSGTSCSSSCGHYESGSGQ 813
Query: 352 ATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTSSNSFNNGW 411
A+GFG H + G GQ +G+ F Q G + Q+ +G +SS ++ +
Sbjct: 814 ASGFGQHES----GSGQGYSQHGSASGHFSSQ-GRHGSTSGQSSSSGQHDSSSGQ-SSSY 867
Query: 412 YPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPFS 463
A+HH + + + G Q G+GQ + GS S S S
Sbjct: 868 GQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSS 919
Score = 55.1 bits (131), Expect = 2e-06
Identities = 61/254 (24%), Positives = 97/254 (38%), Gaps = 33/254 (12%)
Query: 229 ASVNLTHAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSR-GRG 287
+S N TH SG+ +G +Q ++ S ++ G+ +G++S G++GSR G+
Sbjct: 215 SSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGY-------GQHGSRSGQS 267
Query: 288 FRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFG----- 342
RG R R G + G GH R S P + +GS G+
Sbjct: 268 SRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQS--PSHVRHGSGSGHSSSHGQH 325
Query: 343 ----------GNLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAP 392
G+ SG G +GFG H + Q G G+ + Q G++ A
Sbjct: 326 GSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQAS 385
Query: 393 QAYITGNESTSSNSFNNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQ----GL 448
+ G+ S S+S+ A+ H + + + G Q G+GQ G
Sbjct: 386 SSGQHGSSSRQSSSYGQ----HESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQ 441
Query: 449 AINSIGSMSFSSPF 462
G S S P+
Sbjct: 442 HGTGFGRSSSSGPY 455
Score = 49.7 bits (117), Expect = 6e-05
Identities = 61/238 (25%), Positives = 94/238 (38%), Gaps = 31/238 (13%)
Query: 227 ETASVNLTHAENSGEKNGH--NQPQTGSYPDQQ--FNISGNPTGNNSSQYFNPNFGGRNG 282
E+ S + + G +GH +Q Q GS Q F+ G+ TG +SS G
Sbjct: 1288 ESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSY----------G 1337
Query: 283 SRGRGFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFG 342
RG G + GR G G+ + + +GH +S H G GS +
Sbjct: 1338 HRGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQH---------GSGSGWSSSS 1388
Query: 343 GNLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNEST 402
G GSG G ++GFG H + Q G G+ + Q G+ + + G+ S
Sbjct: 1389 GRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSG 1448
Query: 403 SSNSF---NNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMS 457
SS+S+ +G G H + + + GS G+GQ + + GS S
Sbjct: 1449 SSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGS-----GSGQSSSYSPYGSGS 1501
Score = 48.5 bits (114), Expect = 1e-04
Identities = 59/238 (24%), Positives = 94/238 (38%), Gaps = 31/238 (13%)
Query: 227 ETASVNLTHAENSGEKNGH--NQPQTGSYPDQQ--FNISGNPTGNNSSQYFNPNFGGRNG 282
E+ S + + G +GH +Q Q GS Q F+ G+ TG +SS +G
Sbjct: 2228 ESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSS----------HG 2277
Query: 283 SRGRGFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFG 342
G G + G+ G G+ + + +GH +S H G GS +
Sbjct: 2278 QHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQH---------GSGSGWSSSS 2328
Query: 343 GNLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNEST 402
G GSG G ++GFG H + Q G G+ + Q G+ + + G+ S
Sbjct: 2329 GRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSG 2388
Query: 403 SSNSF---NNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMS 457
SS+S+ +G G H + + + GS G+GQ + + GS S
Sbjct: 2389 SSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGS-----GSGQSSSYSPYGSGS 2441
Score = 48.1 bits (113), Expect = 2e-04
Identities = 59/238 (24%), Positives = 93/238 (38%), Gaps = 31/238 (13%)
Query: 227 ETASVNLTHAENSGEKNGH--NQPQTGSYPDQQ--FNISGNPTGNNSSQYFNPNFGGRNG 282
E+ S + + G +GH +Q Q GS Q F+ G+ TG +SS +G
Sbjct: 1758 ESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSS----------HG 1807
Query: 283 SRGRGFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFG 342
G G + G+ G G+ + + +GH +S H G GS +
Sbjct: 1808 QHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQH---------GSGSGWSSSS 1858
Query: 343 GNLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNEST 402
G GSG G ++GFG H + Q G G+ + Q G+ + + G+ S
Sbjct: 1859 GRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSG 1918
Query: 403 SSNSF---NNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMS 457
SS+S+ +G G H + + + GS G+GQ + GS S
Sbjct: 1919 SSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGS-----GSGQSSSYGPYGSGS 1971
Score = 46.2 bits (108), Expect = 7e-04
Identities = 46/192 (23%), Positives = 77/192 (39%), Gaps = 29/192 (15%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRGFRGNRFR 294
H SG+ GH Q +GS + G+ +G +SS + G S G G + + +
Sbjct: 883 HGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSS--GRHGSGSGQSSGFGHKSSSGQ 940
Query: 295 GRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGGN--LGSGYGPA 352
G G G +GH +S YE +GS G + GS G +
Sbjct: 941 SSGYTQHGSG---------SGHSSS-----------YEQHGSRSGQSSRSEQHGSSSGSS 980
Query: 353 TGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQ----FGNSRPPAPQAYITGNE-STSSNSF 407
+ +G H + Q +G G+ ++P P + G+ + + Y +G+ S+S +
Sbjct: 981 SSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPY 1040
Query: 408 NNGWYPDSGATH 419
+G SG H
Sbjct: 1041 ESGSGHSSGLGH 1052
Score = 45.8 bits (107), Expect = 0.001
Identities = 51/232 (21%), Positives = 88/232 (36%), Gaps = 23/232 (9%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRGFRGNRFR 294
H SG+ + H Q +GS ++ G+ +G + S+ + + G + S G+ G+ +
Sbjct: 626 HGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWS 685
Query: 295 GRGGRNFGRGNIQCQICYKTGHDASICYHR----LSVPPQYEGYGSLGGNFGGN--LGSG 348
G + +K+G S Y + S Y +GS G + GS
Sbjct: 686 SSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSS 745
Query: 349 YGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTSSNSFN 408
G ++ +G H + Q G G+ +P + G+S S+S
Sbjct: 746 SGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSS----------SGHSSSHGQHG 795
Query: 409 NGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSS 460
+G S H+ + + SG Q G+GQG + + S FSS
Sbjct: 796 SGTSCSSSCGHYES-------GSGQASGFGQHESGSGQGYSQHGSASGHFSS 840
Score = 45.8 bits (107), Expect = 0.001
Identities = 62/273 (22%), Positives = 90/273 (32%), Gaps = 62/273 (22%)
Query: 226 GETASVNLTHAENSGEKNGHNQPQTGSYPDQQFNISGNPTG------------NNSSQYF 273
G S H +SG+ +G+ Q +GS + G+ +G +SS Y
Sbjct: 925 GSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYG 984
Query: 274 NPNFGGR----NGSRGRGFRGNRFRGRGGRNFGRGNIQCQICYKTGH------------- 316
G R +G G G + RG G G Y++G
Sbjct: 985 QHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESGS 1044
Query: 317 -DASICYHRLSVPPQYEGYGSLGGNFG------------------GNLGSGYGPATGFGT 357
+S HR S Q GYG G + G G G+ G ++ G
Sbjct: 1045 GHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQ 1104
Query: 358 HSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGN---ESTSSNSFNNGWYPD 414
H + Q G G+ ++P Q G+ +P G+ S+SS +G
Sbjct: 1105 HGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGES 1164
Query: 415 SGATHHVTPDANNLMDAASFSGSDQMYIGNGQG 447
SG HH S SG Y +G G
Sbjct: 1165 SGFGHH-----------ESSSGQSSSYSQHGSG 1186
Score = 44.7 bits (104), Expect = 0.002
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 9/184 (4%)
Query: 226 GETASVNLTHAEN-SGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSR 284
G + S L H E+ SG+ +G+ Q + S G+ +G +SS + G++ S
Sbjct: 1513 GSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSH 1572
Query: 285 GR-GFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGG 343
G+ G ++ G G + G G GH R S G GS + G
Sbjct: 1573 GQHGSGSSQSSGYGRQGSGSGQ-------SPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 1625
Query: 344 NLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTS 403
GSG G ++GFG H + Q G+ + Q G+ + + G+ S S
Sbjct: 1626 QHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRS 1685
Query: 404 SNSF 407
S+ +
Sbjct: 1686 SSRY 1689
Score = 43.1 bits (100), Expect = 0.006
Identities = 51/225 (22%), Positives = 80/225 (34%), Gaps = 36/225 (16%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRGFRGNRFR 294
H S + GH Q +GS + + +G+ S ++P G S RG +
Sbjct: 2396 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRG----PYE 2451
Query: 295 GRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFG---------GNL 345
G + G G+ + ++G + H S G+ S G G G
Sbjct: 2452 SGSGHSSGLGHRES----RSGQSSGYGQHGSS-----SGHSSTHGQHGSTSGQSSSCGQH 2502
Query: 346 GSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGN---EST 402
G+ G ++ G H + Q G G+ ++P Q G+ +P G+ S+
Sbjct: 2503 GASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSS 2562
Query: 403 SSNSFNNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQG 447
SS +G SG HH S SG Y +G G
Sbjct: 2563 SSGQHGSGLGESSGFGHH-----------ESSSGQSSSYSQHGSG 2596
Score = 43.1 bits (100), Expect = 0.006
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 9/184 (4%)
Query: 226 GETASVNLTHAEN-SGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSR 284
G S L H E+ SG+ +G+ Q + S G+ +G +SS + G++ S
Sbjct: 1043 GSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSH 1102
Query: 285 GR-GFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGG 343
G+ G ++ G G + G G GH R S G GS + G
Sbjct: 1103 GQHGSGSSQSSGYGRQGSGSGQ-------SPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 1155
Query: 344 NLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTS 403
GSG G ++GFG H + Q G+ + Q G+ + + G+ S S
Sbjct: 1156 QHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGS 1215
Query: 404 SNSF 407
S+ +
Sbjct: 1216 SSHY 1219
Score = 43.1 bits (100), Expect = 0.006
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 9/184 (4%)
Query: 226 GETASVNLTHAEN-SGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSR 284
G S L H E+ SG+ +G+ Q + S G+ +G +SS + G++ S
Sbjct: 2453 GSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSH 2512
Query: 285 GR-GFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGG 343
G+ G ++ G G + G G GH R S G GS + G
Sbjct: 2513 GQHGSGSSQSSGYGRQGSGSGQ-------SPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 2565
Query: 344 NLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTS 403
GSG G ++GFG H + Q G+ + Q G+ + + G+ S S
Sbjct: 2566 QHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGS 2625
Query: 404 SNSF 407
S+ +
Sbjct: 2626 SSHY 2629
Score = 41.6 bits (96), Expect = 0.017
Identities = 48/216 (22%), Positives = 75/216 (34%), Gaps = 18/216 (8%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRGFRGNRFR 294
H S + GH Q +GS + + +G+ S + P G S RG +
Sbjct: 1926 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRG----PYE 1981
Query: 295 GRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGGNLGSGYGPATG 354
G + G G+ + + +G+ S G S + G G+ G ++
Sbjct: 1982 SGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSS 2041
Query: 355 FGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGN---ESTSSNSFNNGW 411
G H + Q G G+ ++P Q G+ +P G+ S+SS G
Sbjct: 2042 HGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGL 2101
Query: 412 YPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQG 447
SG HH S SG Y +G G
Sbjct: 2102 GESSGFGHH-----------ESSSGQSSSYSQHGSG 2126
Score = 41.2 bits (95), Expect = 0.022
Identities = 45/184 (24%), Positives = 72/184 (38%), Gaps = 9/184 (4%)
Query: 226 GETASVNLTHAEN-SGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSR 284
G S L H E+ SG+ +G+ Q + S G+ +G +SS + G++ S
Sbjct: 1983 GSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSH 2042
Query: 285 GR-GFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGG 343
G+ G ++ G G + G G GH R S G GS + G
Sbjct: 2043 GQHGSGSSQSSGYGRQGSGSGQ-------SPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 2095
Query: 344 NLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTS 403
G G G ++GFG H + Q G+ + Q G+ + + G+ S S
Sbjct: 2096 QHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGS 2155
Query: 404 SNSF 407
S+ +
Sbjct: 2156 SSRY 2159
Score = 40.8 bits (94), Expect = 0.029
Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 27/211 (12%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRN---GSRGRGFRGN 291
H SG+ + Q + S + + + ++S + + + G++ G RG G +
Sbjct: 377 HGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQS 436
Query: 292 RFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQ--YEGYGSLGGNFGGN----- 344
G+ G FGR + +G+ + +H S Y +GS G+ G+
Sbjct: 437 PSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGS 496
Query: 345 ----------LGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQ------FGNSR 388
GS G ++ +G H + Q +G G+ ++P P + S
Sbjct: 497 RSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSS 556
Query: 389 PPAPQAYITGNESTSSNSFNNGWYPDSGATH 419
P Y +G S+S + +G SG H
Sbjct: 557 SYGPHGYGSG-RSSSRGPYESGSGHSSGLGH 586
Score = 40.8 bits (94), Expect = 0.029
Identities = 54/228 (23%), Positives = 81/228 (34%), Gaps = 42/228 (18%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRG------- 287
H S + GH Q +GS + + +G+ S ++P G S RG
Sbjct: 1456 HGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSS 1515
Query: 288 ---FRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFG-- 342
G+R R G++ G G Q +GH ++ H S Q G G + G
Sbjct: 1516 HSSGLGHR-ESRSGQSSGYG----QHGSSSGHSSTHGQHG-STSGQSSSCGQHGASSGQS 1569
Query: 343 ---GNLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGN 399
G GSG ++G+G + Q G G+ ++P + G+
Sbjct: 1570 SSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSG----------SG 1619
Query: 400 ESTSSNSFNNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQG 447
S+SS +G SG HH S SG Y +G G
Sbjct: 1620 RSSSSGQHGSGLGESSGFGHH-----------ESSSGQSSSYSQHGSG 1656
Score = 40.4 bits (93), Expect = 0.038
Identities = 60/236 (25%), Positives = 93/236 (38%), Gaps = 30/236 (12%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRG----RGFRG 290
H S + +GH + +GS G+ G++SS + + GR+ SRG R
Sbjct: 1222 HGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHS 1281
Query: 291 NRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFG-----GNL 345
+ F G+ G + Q +GH S H S Q + G + G G+
Sbjct: 1282 SVF-GQHESGSGHSSAYSQHGSGSGHFCSQGQHG-STSGQSSTFDQEGSSTGQSSSYGHR 1339
Query: 346 GSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNE-STSS 404
GSG ++G+G H G GQ +PS G + G+ + + +G+ S+SS
Sbjct: 1340 GSGSSQSSGYGRHG----AGSGQ-SPSRGRHGS------GSGHSSSYGQHGSGSGWSSSS 1388
Query: 405 NSFNNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSS 460
+G SG HH + + SG Q G+G + GS S S
Sbjct: 1389 GRHGSGSGQSSGFGHHESSSWQS-------SGCTQHGSGSGHSSSYEQHGSRSGQS 1437
Score = 38.1 bits (87), Expect = 0.19
Identities = 62/267 (23%), Positives = 93/267 (34%), Gaps = 51/267 (19%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRG--------- 285
H S + +GH + +GS G+ G++SS + + GR+ SRG
Sbjct: 1692 HGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHS 1751
Query: 286 ------------------RGFRGNRF--RGRGGRNFGRGNIQCQICYKTGHDASICYHRL 325
G F +G+ G G+ + Q TG +S H
Sbjct: 1752 SVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHG- 1810
Query: 326 SVPPQYEGYGSLGGNFG-----GNLGSGYGPATGFGTH--SNVWMQGVGQRNPSYGAPRA 378
S Q YG G G G GSG G ++ +G H + W G+ G
Sbjct: 1811 SGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSG 1870
Query: 379 PFPPQFGNSRPPAPQAYITGNESTSSNSFNNGWYPDSGATHHVTPDANNLMDAASFSGSD 438
FG+ + Q+ +G S S ++ Y G+ + ++ S SGS
Sbjct: 1871 -----FGHHESSSWQS--SGYTQHGSGSGHSSSYEQHGSR---SGQSSRGEQHGSSSGSS 1920
Query: 439 QMY----IGNGQGLAINSIGSMSFSSP 461
Y G+ Q L GS S SP
Sbjct: 1921 SSYGQHGSGSRQSLGHGQHGSGSGQSP 1947
Score = 38.1 bits (87), Expect = 0.19
Identities = 48/220 (21%), Positives = 83/220 (36%), Gaps = 28/220 (12%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRGFRGNRFR 294
H S + +GH + +GS G+ +G++SS + + GR+ SRG +
Sbjct: 2162 HGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRG------PYE 2215
Query: 295 GRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNF--GGNLGSGYGPA 352
R G + G + +GH ++ Y +GS G+F G GS G +
Sbjct: 2216 SRSGHSSVFGQHES----GSGHSSA-----------YSQHGSGSGHFCSQGQHGSTSGQS 2260
Query: 353 TGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTSSNSF----- 407
+ F + Q G+ ++ Q G+ +P G+ S S+S+
Sbjct: 2261 STFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGS 2320
Query: 408 NNGWYPDSGATHHVTPDANNLMDAASFSGSDQMYIGNGQG 447
+GW SG + ++ S S Y +G G
Sbjct: 2321 GSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSG 2360
Score = 37.4 bits (85), Expect = 0.32
Identities = 53/241 (21%), Positives = 88/241 (35%), Gaps = 21/241 (8%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRN---GSRGRGFRGN 291
H +SG+ + ++Q +GS + G+ +G +S + + G + G G G R +
Sbjct: 2580 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQS 2639
Query: 292 RFRGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGGNLGSGYGP 351
GR G G+ + + GH +S H G GS + G S G
Sbjct: 2640 SGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQH---------GSGSGRSSSRGPYESRLGH 2690
Query: 352 ATGFGTHSNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTSSNSF---N 408
++ FG H + G+ Q G++ + G+ + S+S+
Sbjct: 2691 SSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRG 2750
Query: 409 NGWYPDSGATHHVTPDANNLMDAASFSGSDQMY------IGNGQGLAINSIGSMSFSSPF 462
+G SG H +L SGS Q G+GQ + GS S +
Sbjct: 2751 SGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQHGSGSGQSSGYSQHGSGSGQDGY 2810
Query: 463 S 463
S
Sbjct: 2811 S 2811
Score = 36.2 bits (82), Expect = 0.72
Identities = 51/251 (20%), Positives = 87/251 (34%), Gaps = 38/251 (15%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTG------------NNSSQYFNPNFGGR-- 280
H +SG+ + ++Q +GS + G+ +G +SS+Y G R
Sbjct: 1640 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQS 1699
Query: 281 ---------------NGSRGRGFRGNRFRGRGGRNFGRGNIQCQICYKTGHDASICYHRL 325
G G G + G+ G GR + + ++GH + H
Sbjct: 1700 SGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHES 1759
Query: 326 SV--PPQYEGYGSLGGNF--GGNLGSGYGPATGFGTHSNVWMQGVGQRNPSYGAPRAPFP 381
Y +GS G+F G GS G ++ F + Q G+ ++
Sbjct: 1760 GSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSY 1819
Query: 382 PQFGNSRPPAPQAYITGNESTSSNSF-----NNGWYPDSGATHHVTPDANNLMDAASFSG 436
Q G+ +P G+ S S+S+ +GW SG + ++ S S
Sbjct: 1820 GQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSW 1879
Query: 437 SDQMYIGNGQG 447
Y +G G
Sbjct: 1880 QSSGYTQHGSG 1890
Score = 33.1 bits (74), Expect = 6.1
Identities = 32/134 (23%), Positives = 54/134 (39%), Gaps = 9/134 (6%)
Query: 235 HAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRN---GSRGRGFRGN 291
H +SG+ + ++Q +GS + G+ +G +S + + G + G G G R +
Sbjct: 1170 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQS 1229
Query: 292 RFRGRGGRNFGRGNIQCQICYKTGHDASICYH-----RLSVPPQYEGYGSLGGNFGGNLG 346
GR G G + + GH +S H R S YE FG +
Sbjct: 1230 SGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQH-E 1288
Query: 347 SGYGPATGFGTHSN 360
SG G ++ + H +
Sbjct: 1289 SGSGHSSAYSQHGS 1302
>GR2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)
Length = 201
Score = 51.2 bits (121), Expect = 2e-05
Identities = 45/143 (31%), Positives = 56/143 (38%), Gaps = 14/143 (9%)
Query: 216 RNEKFKKALVGETASVNLTHAENSGEKNGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNP 275
R+E F+ E+ ++ +NSG P Q + G +G F
Sbjct: 48 RSEGFRSLAAEESVEFDV-EVDNSGRPKAIEVSGPDGAPVQGNSGGGGSSGGRGG--FGG 104
Query: 276 NFGGRNGSRGRGFRGNRF--RGRGGRNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEG 333
GGR G RG G G + RG GGR G G+ C C + GH A C G
Sbjct: 105 G-GGRGGGRGGGSYGGGYGGRGSGGRGGGGGDNSCFKCGEPGHMAREC--------SQGG 155
Query: 334 YGSLGGNFGGNLGSGYGPATGFG 356
G GG GG GSG G G G
Sbjct: 156 GGYSGGGGGGRYGSGGGGGGGGG 178
>YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III
Length = 2186
Score = 50.8 bits (120), Expect = 3e-05
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 13/185 (7%)
Query: 628 CSACCLGKSHRLPSVSSKTVYNK--PFELIFCDLWGPASVESHGGYSYFLICVDAYSRYT 685
C+ C H SS T Y P E++ CDL S G Y L +D +++Y
Sbjct: 1510 CAKCLCANDHS-KLTSSLTPYRMTFPLEIVACDLMDVGL--SVQGNRYILTIIDLFTKYG 1566
Query: 686 WIFPLKLKSHTLITFQNFKTMVELQYNLPIKSVQTDGGGEFRP--FTQFLTTLGITHRLT 743
P+ K + + + +P+K + TD G EF F QF L I H T
Sbjct: 1567 TAVPIPDKKAETVLKAFVERWAIGEGRIPLKLL-TDQGKEFVNGLFAQFTHMLKIEHITT 1625
Query: 744 CPHTHHQNGSVERKHRHIVETGLTLLANAKLPLHYWDHAFLTATYLINRLPSPILNNKSP 803
+ NG+VER ++ I+ + +P+ WD + A Y N ++P
Sbjct: 1626 KGYNSRANGAVERFNKTIMH---IMKKKTAVPME-WDDQVVYAVYAYNNCVHE-NTGETP 1680
Query: 804 FFLLH 808
FL+H
Sbjct: 1681 MFLMH 1685
>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 886
Score = 50.8 bits (120), Expect = 3e-05
Identities = 45/152 (29%), Positives = 66/152 (42%), Gaps = 13/152 (8%)
Query: 650 KPFELIFCDLWGPASVESHGGYSYFLICVDAYSRYTWIFPLKLKSHTLITFQNFKTMVEL 709
KPF+ F D GP GY Y L+ VD + +TW++P K S T T ++ + +
Sbjct: 674 KPFDKFFIDYIGPLPPSQ--GYLYVLVVVDGMTGFTWLYPTKAPS-TSATVKSLNVLTSI 730
Query: 710 QYNLPIKSVQTDGGGEF--RPFTQFLTTLGITHRLTCPHTHHQNGS-VERKHRHIVETGL 766
+P K + +D G F F ++ GI + P+ H Q+GS VERK+ I
Sbjct: 731 A--IP-KVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPY-HPQSGSKVERKNSDIKRLLT 786
Query: 767 TLLANAKLPLHYWDHAFLTATYLINRLPSPIL 798
LL W +N SP+L
Sbjct: 787 KLLVGRPTK---WYDLLPVVQLALNNTYSPVL 815
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP
A3)
Length = 379
Score = 50.4 bits (119), Expect = 4e-05
Identities = 61/224 (27%), Positives = 78/224 (34%), Gaps = 58/224 (25%)
Query: 243 NGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRGF----RGNRFRGRGG 298
NGHN + Q+ +G+ G + NF GR G+ G G RG F GRGG
Sbjct: 192 NGHNCEVKKALSKQEMQSAGSQRGRGGG---SGNFMGRGGNFGGGGGNFGRGGNFGGRGG 248
Query: 299 RNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGGNLGSGYGPATGFGTH 358
+G G + Y G Y G+G GGN+GG G GY G+G
Sbjct: 249 --YGGGGGGSRGSYGGGDGG------------YNGFGGDGGNYGG--GPGYSSRGGYGGG 292
Query: 359 SNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTSSNSFNNGWYPDSGAT 418
G G + YG Y NE +F G Y G
Sbjct: 293 G----PGYGNQGGGYGG---------------GGGGYDGYNE---GGNFGGGNYGGGG-- 328
Query: 419 HHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPF 462
N D ++SG Q G +G S G S SP+
Sbjct: 329 --------NYNDFGNYSGQQQSNYGPMKG---GSFGGRSSGSPY 361
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3
(hnRNP A3)
Length = 379
Score = 50.4 bits (119), Expect = 4e-05
Identities = 61/224 (27%), Positives = 78/224 (34%), Gaps = 58/224 (25%)
Query: 243 NGHNQPQTGSYPDQQFNISGNPTGNNSSQYFNPNFGGRNGSRGRGF----RGNRFRGRGG 298
NGHN + Q+ +G+ G + NF GR G+ G G RG F GRGG
Sbjct: 192 NGHNCEVKKALSKQEMQSAGSQRGRGGG---SGNFMGRGGNFGGGGGNFGRGGNFGGRGG 248
Query: 299 RNFGRGNIQCQICYKTGHDASICYHRLSVPPQYEGYGSLGGNFGGNLGSGYGPATGFGTH 358
+G G + Y G Y G+G GGN+GG G GY G+G
Sbjct: 249 --YGGGGGGSRGSYGGGDGG------------YNGFGGDGGNYGG--GPGYSSRGGYGGG 292
Query: 359 SNVWMQGVGQRNPSYGAPRAPFPPQFGNSRPPAPQAYITGNESTSSNSFNNGWYPDSGAT 418
G G + YG Y NE +F G Y G
Sbjct: 293 G----PGYGNQGGGYGG---------------GGGGYDGYNE---GGNFGGGNYGGGG-- 328
Query: 419 HHVTPDANNLMDAASFSGSDQMYIGNGQGLAINSIGSMSFSSPF 462
N D ++SG Q G +G S G S SP+
Sbjct: 329 --------NYNDFGNYSGQQQSNYGPMKG---GSFGGRSSGSPY 361
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,216,284
Number of Sequences: 164201
Number of extensions: 8853311
Number of successful extensions: 33990
Number of sequences better than 10.0: 415
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 30141
Number of HSP's gapped (non-prelim): 2050
length of query: 1557
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1433
effective length of database: 39,613,130
effective search space: 56765615290
effective search space used: 56765615290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)
Medicago: description of AC149038.3