BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148971.3 - phase: 0
(226 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SEN6_HUMAN (Q9GZR1) Sentrin-specific protease 6 (EC 3.4.22.-) (S... 49 1e-05
SEN7_HUMAN (Q9BQF6) Sentrin-specific protease 7 (EC 3.4.22.-) (S... 42 0.001
ULP2_SCHPO (O13769) Ubiquitin-like-specific protease 2 (EC 3.4.2... 40 0.006
ULP4_CAEEL (Q09275) Putative thiol protease ulp-4 (EC 3.4.22.-) ... 38 0.022
SEN1_HUMAN (Q9P0U3) Sentrin-specific protease 1 (EC 3.4.22.-) (S... 32 1.6
CLR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor ... 31 2.1
SNP2_MOUSE (Q91ZX6) Sentrin-specific protease 2 (EC 3.4.22.-) (S... 31 2.7
SNP2_HUMAN (Q9HC62) Sentrin-specific protease 2 (EC 3.4.22.-) (S... 31 2.7
SEN2_RAT (Q9EQE1) Sentrin-specific protease 2 (EC 3.4.22.-) (Sen... 31 2.7
SP74_YEAST (P45819) Sporulation-specific protein 74 30 3.6
SEN1_MOUSE (P59110) Sentrin-specific protease 1 (EC 3.4.22.-) (S... 30 3.6
ULP2_YEAST (P40537) Ubiquitin-like-specific protease 2 (EC 3.4.2... 30 4.7
SEN5_MACFA (Q8WP32) Sentrin-specific protease 5 (EC 3.4.22.-) (S... 30 4.7
SEN5_HUMAN (Q96HI0) Sentrin-specific protease 5 (EC 3.4.22.-) (S... 30 4.7
IF3A_SCHPO (O74760) Probable eukaryotic translation initiation f... 30 6.1
DPOG_SCHPO (Q12704) DNA polymerase gamma (EC 2.7.7.7) (Mitochond... 29 7.9
>SEN6_HUMAN (Q9GZR1) Sentrin-specific protease 6 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP6) (SUMO-1 specific
protease 1) (Protease FKSG6)
Length = 1112
Score = 48.9 bits (115), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 47 QLPQQDNFYDCGLFLLYFVERFLEEAPIKFN-PFKITKFSKFLNSNWFPSDEASLRRSHI 105
++PQQ+NF DCG+++L +VE F + + F P + +NWFP +R I
Sbjct: 1020 KVPQQNNFSDCGVYVLQYVESFFQNPILSFELPMNL--------ANWFPPPRMRTKREEI 1071
Query: 106 QNLIYDIFENGS 117
+N+I + E+ S
Sbjct: 1072 RNIILKLQEDQS 1083
>SEN7_HUMAN (Q9BQF6) Sentrin-specific protease 7 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP7) (SUMO-1 specific
protease 2)
Length = 984
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (52%), Gaps = 9/64 (14%)
Query: 47 QLPQQDNFYDCGLFLLYFVERFLEEAPIKFN-PFKITKFSKFLNSNWFPSDEASLRRSHI 105
++P+QDN DCG++LL +VE F ++ + F P + K WFP +R I
Sbjct: 916 KVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEK--------WFPRHVIKTKREDI 967
Query: 106 QNLI 109
+ LI
Sbjct: 968 RELI 971
>ULP2_SCHPO (O13769) Ubiquitin-like-specific protease 2 (EC
3.4.22.-)
Length = 652
Score = 39.7 bits (91), Expect = 0.006
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 44 FFFQLPQQDNFYDCGLFLLYFVERFLE 70
F ++PQQ NF DCG++ L+FVE FLE
Sbjct: 545 FHAKVPQQSNFSDCGIYALHFVELFLE 571
>ULP4_CAEEL (Q09275) Putative thiol protease ulp-4 (EC 3.4.22.-)
(Ubiquitin-lile protease 4)
Length = 342
Score = 37.7 bits (86), Expect = 0.022
Identities = 21/69 (30%), Positives = 36/69 (51%), Gaps = 11/69 (15%)
Query: 15 ISLEVSSLQMNLTNSVELFIDFC----------FSLPPFFFFQLPQQDNFYDCGLFLLYF 64
++ ++++LQ N+ +E F+ + F LP ++PQQ N +DCG+F+ F
Sbjct: 258 LTADLNNLQ-NMATLIESFMKYSYEKRTGNAMPFPLPCILPQRMPQQTNNFDCGIFIAEF 316
Query: 65 VERFLEEAP 73
RFL P
Sbjct: 317 ARRFLLSPP 325
>SEN1_HUMAN (Q9P0U3) Sentrin-specific protease 1 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP1)
Length = 643
Score = 31.6 bits (70), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 47 QLPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSK 86
Q+PQQ N DCG+F + + ++ PI F + F K
Sbjct: 592 QIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRK 631
>CLR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3
precursor (Flamingo homolog 1) (hFmi1) (Multiple
epidermal growth factor-like domains 2) (Epidermal growth
factor-like 1)
Length = 3312
Score = 31.2 bits (69), Expect = 2.1
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 16/89 (17%)
Query: 135 PGVIEHKVEADSSGASCYPGIWHGNLSNGSTETDIQFRPVSPVRAASCSRDPGIVFKDLQ 194
PG E EA C G+W G+ +GS P + + +PG V +
Sbjct: 1902 PGSAE---EAPQGLVGCIQGVWLGSTPSGS--------PALLPPSHRVNAEPGCVVTNAC 1950
Query: 195 AA-VVPPHFDCRQM----SLCHQSGFLSP 218
A+ PPH DCR + S Q G+ P
Sbjct: 1951 ASGPCPPHADCRDLWQTFSCTCQPGYYGP 1979
>SNP2_MOUSE (Q91ZX6) Sentrin-specific protease 2 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP2)
(SUMO-1/Smt3-specific isopeptidase 2) (Smt3ip2) (Axam2)
Length = 588
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 47 QLPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSK 86
++PQQ N DCG+F + + + PI F ++ F K
Sbjct: 537 EIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRK 576
>SNP2_HUMAN (Q9HC62) Sentrin-specific protease 2 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP2) (SMT3-specific
isopeptidase 2) (Smt3ip2) (Axam2)
Length = 589
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 47 QLPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSK 86
++PQQ N DCG+F + + + PI F ++ F K
Sbjct: 538 EIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRK 577
>SEN2_RAT (Q9EQE1) Sentrin-specific protease 2 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP2) (Axin associating
molecule) (Axam)
Length = 588
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 47 QLPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSK 86
++PQQ N DCG+F + + + PI F ++ F K
Sbjct: 537 EIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRK 576
>SP74_YEAST (P45819) Sporulation-specific protein 74
Length = 413
Score = 30.4 bits (67), Expect = 3.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 17 LEVSSLQMNLTNSVELFIDFCFSLPPFFFFQLPQQDNFYD 56
LEVS L+ NL ++ ID C S PFF + Q F +
Sbjct: 171 LEVSFLKTNLLTYIKKEIDICLSSVPFFDDAVQMQKKFLE 210
>SEN1_MOUSE (P59110) Sentrin-specific protease 1 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP1)
Length = 640
Score = 30.4 bits (67), Expect = 3.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 47 QLPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSK 86
++PQQ N DCG+F + + ++ PI F + F K
Sbjct: 589 EIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRK 628
>ULP2_YEAST (P40537) Ubiquitin-like-specific protease 2 (EC
3.4.22.-)
Length = 1034
Score = 30.0 bits (66), Expect = 4.7
Identities = 15/67 (22%), Positives = 35/67 (51%), Gaps = 5/67 (7%)
Query: 48 LPQQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITK-----FSKFLNSNWFPSDEASLRR 102
+PQQ N DCG+ ++ + +F E + +K +K F+ + + +F +E + R
Sbjct: 615 VPQQPNMSDCGVHVILNIRKFFENPVETIDVWKNSKIKSKHFTAKMINKYFDKNERNSAR 674
Query: 103 SHIQNLI 109
++++ +
Sbjct: 675 KNLRHTL 681
>SEN5_MACFA (Q8WP32) Sentrin-specific protease 5 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP5) (QtsA-16408)
Length = 755
Score = 30.0 bits (66), Expect = 4.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 48 LPQQDNFYDCGLFLLYFVERFLEEAPIKFN 77
+PQQ N DCG+F+L + + E P +F+
Sbjct: 704 IPQQKNDSDCGVFVLQYCKCLALEQPFQFS 733
>SEN5_HUMAN (Q96HI0) Sentrin-specific protease 5 (EC 3.4.22.-)
(Sentrin/SUMO-specific protease SENP5) (Protease FKSG45)
Length = 755
Score = 30.0 bits (66), Expect = 4.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 48 LPQQDNFYDCGLFLLYFVERFLEEAPIKFN 77
+PQQ N DCG+F+L + + E P +F+
Sbjct: 704 IPQQKNDSDCGVFVLQYCKCLALEQPFQFS 733
>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation
factor 3 110 kDa subunit (eIF3 p110) (Translation
initiation factor eIF3, p110 subunit) (eIF3a)
Length = 932
Score = 29.6 bits (65), Expect = 6.1
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 50 QQDNFYDCGLFLLYFVERFLEEAPIKFNPFKITKFSKFLNSNWFPSDEASLRRSHIQNLI 109
Q YD + L Y ++ E P FNP +I KF +N N S+R +HI+N I
Sbjct: 431 QLSQVYD-SISLKYVMDLATFEEPYDFNPGQIEKF--IMNGN--KKGAFSIRLNHIENSI 485
Query: 110 ---YDIFEN 115
D+F N
Sbjct: 486 SFSSDLFSN 494
>DPOG_SCHPO (Q12704) DNA polymerase gamma (EC 2.7.7.7)
(Mitochondrial DNA polymerase catalytic subunit)
Length = 1018
Score = 29.3 bits (64), Expect = 7.9
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 63 YFVERFLEEAPIKFNPFKITKFSKFLNSNWFPSDEASLRRSHI 105
Y + F++ AP++ NP + S L + FP + + H+
Sbjct: 31 YSSKSFIDNAPLRINPVGVQYLSPALQNQVFPQQNTQISQLHL 73
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.141 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,508,120
Number of Sequences: 164201
Number of extensions: 1177833
Number of successful extensions: 2674
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2659
Number of HSP's gapped (non-prelim): 17
length of query: 226
length of database: 59,974,054
effective HSP length: 106
effective length of query: 120
effective length of database: 42,568,748
effective search space: 5108249760
effective search space used: 5108249760
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)
Medicago: description of AC148971.3