BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148969.14 + phase: 0
(420 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 50 8e-06
LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13... 41 0.005
TAL_PSEPK (Q88KX1) Transaldolase (EC 2.2.1.2) 32 2.3
SCPB_STAAW (Q8NWF2) Segregation and condensation protein B 32 2.3
SCPB_STAAN (P60219) Segregation and condensation protein B 32 2.3
SCPB_STAAM (P60218) Segregation and condensation protein B 32 2.3
LIB5_PANTR (Q8MJZ7) Leukocyte immunoglobulin-like receptor subfa... 32 3.0
M24_STRPY (P12379) M protein, serotype 24 precursor 32 4.0
DXS_NITEU (Q82VD3) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2... 32 4.0
CVRA_SHEON (Q8EAZ0) Cell volume regulation protein A homolog 32 4.0
YJ9C_YEAST (P47166) Hypothetical 81.2 kDa protein in NMD5-HOM6 i... 31 6.8
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
Length = 1261
Score = 50.4 bits (119), Expect = 8e-06
Identities = 64/299 (21%), Positives = 112/299 (37%), Gaps = 29/299 (9%)
Query: 119 LPQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDFDE 178
+P++ ++ T G+ ALN F + +V +NA L+ L ++R E
Sbjct: 885 IPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTE 944
Query: 179 ISRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPDVVTYTTL 238
+ E+ + V + + A C A + N +P V Y T+
Sbjct: 945 CWKLFQEMKESGLLPTSV-TYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTM 1003
Query: 239 ISAFYDHKRWEIGNGL--WNQMVLKGVMPNLHTFNVRIQFLVTVR--RVWDANKLMALMQ 294
I F + L +N++ + P+ HT+ + + T++ V ++ LM+
Sbjct: 1004 IQ-FEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDAYGTLKPVNVGSVKAVLELME 1062
Query: 295 RNGVTPDEVTLVLVIKGFFRAGYPEMAMRVYS-------------ALHDKG-YKISANIY 340
R V I A Y + V S A HD G ++ AN++
Sbjct: 1063 RTDVP---------ILSMHYAAYIHILGNVVSDVQAATSCYMNALAKHDAGEIQLDANLF 1113
Query: 341 QTMIHNLCKRGDFSQAYTLCKDSMRKNWFPNVDTIFMLLEGLKKSGKINKAKVIVALAE 399
Q+ I +L + + D R N N + L++G K G I+KA+ L E
Sbjct: 1114 QSQIESLIANDRIVEGIQIVSDMKRYNVSLNAYIVNALIKGFTKVGMISKARYYFDLLE 1172
>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
(Leucine-rich PPR-motif containing protein)
Length = 1273
Score = 41.2 bits (95), Expect = 0.005
Identities = 27/132 (20%), Positives = 53/132 (39%)
Query: 221 DCVNNKGVKPDVVTYTTLISAFYDHKRWEIGNGLWNQMVLKGVMPNLHTFNVRIQFLVTV 280
D + G DV Y L+ + ++ +M + PN T+ I V
Sbjct: 30 DTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNV 89
Query: 281 RRVWDANKLMALMQRNGVTPDEVTLVLVIKGFFRAGYPEMAMRVYSALHDKGYKISANIY 340
+ A+K++ M+ + E ++ G RAG E A + + + D G + + Y
Sbjct: 90 GDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTY 149
Query: 341 QTMIHNLCKRGD 352
+++ ++GD
Sbjct: 150 LALLNAYAEKGD 161
>TAL_PSEPK (Q88KX1) Transaldolase (EC 2.2.1.2)
Length = 308
Score = 32.3 bits (72), Expect = 2.3
Identities = 21/79 (26%), Positives = 38/79 (47%), Gaps = 14/79 (17%)
Query: 72 KLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRF----DYIEQLLEQQKKLPQSRREGF 127
++++ +K+N N +V+ F + +LAG R + ++QL + Q +LPQ
Sbjct: 200 RIYNYYKANGYNTVVMGASFRNIGQIEQLAGCDRLTISPELLQQLSDDQGELPQ------ 253
Query: 128 VVRIITLYGNAGMIQHALN 146
+ GNAG + LN
Sbjct: 254 ----VLKPGNAGEAKQHLN 268
>SCPB_STAAW (Q8NWF2) Segregation and condensation protein B
Length = 180
Score = 32.3 bits (72), Expect = 2.3
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 53 EWVPSKPALEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQL 112
E + K LE L + ++L + ++ +++ ++++ Y ++ A YIEQL
Sbjct: 17 EGLDEKQLLEIL--DMSKNQLVELIENYSSHGLMIQRFGTTYVLTTKKEAAT---YIEQL 71
Query: 113 LEQQKKLPQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAK 172
+EQ+ ++ S+ V+ II A N D +R++ S A ++AK
Sbjct: 72 IEQKSQMKLSQAAMEVLSII-----------AYNQPLSRSDIELIRSINSDGAVKTLIAK 120
Query: 173 SR-DFDEISRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPD 231
+ ++ ++ D+ L+V+ ++ E +E F + VN KG D
Sbjct: 121 GLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEEDDEEMDAFFSNLVNQKGENND 180
>SCPB_STAAN (P60219) Segregation and condensation protein B
Length = 180
Score = 32.3 bits (72), Expect = 2.3
Identities = 39/180 (21%), Positives = 76/180 (41%), Gaps = 17/180 (9%)
Query: 53 EWVPSKPALEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQL 112
E + K LE L D +L + ++ +++ ++++ Y ++ A YIEQL
Sbjct: 17 EGLDEKQLLEILDMSKD--QLVELIENYSSHGLMIQRFGTTYVLTTKKEAAT---YIEQL 71
Query: 113 LEQQKKLPQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAK 172
+EQ+ ++ S+ V+ II A N D +R++ S A ++AK
Sbjct: 72 IEQKSQMKLSQAAMEVLSII-----------AYNQPLSRSDIELIRSINSDGAVKTLIAK 120
Query: 173 SR-DFDEISRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPD 231
+ ++ ++ D+ L+V+ ++ E +E F + VN KG D
Sbjct: 121 GLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEEDDEEMDAFFSNLVNQKGENND 180
>SCPB_STAAM (P60218) Segregation and condensation protein B
Length = 180
Score = 32.3 bits (72), Expect = 2.3
Identities = 39/180 (21%), Positives = 76/180 (41%), Gaps = 17/180 (9%)
Query: 53 EWVPSKPALEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQL 112
E + K LE L D +L + ++ +++ ++++ Y ++ A YIEQL
Sbjct: 17 EGLDEKQLLEILDMSKD--QLVELIENYSSHGLMIQRFGTTYVLTTKKEAAT---YIEQL 71
Query: 113 LEQQKKLPQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAK 172
+EQ+ ++ S+ V+ II A N D +R++ S A ++AK
Sbjct: 72 IEQKSQMKLSQAAMEVLSII-----------AYNQPLSRSDIELIRSINSDGAVKTLIAK 120
Query: 173 SR-DFDEISRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPD 231
+ ++ ++ D+ L+V+ ++ E +E F + VN KG D
Sbjct: 121 GLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEEDDEEMDAFFSNLVNQKGENND 180
>LIB5_PANTR (Q8MJZ7) Leukocyte immunoglobulin-like receptor
subfamily B member 5 precursor (Leukocyte
immunoglobulin-like receptor 8) (LIR-8)
Length = 643
Score = 32.0 bits (71), Expect = 3.0
Identities = 20/68 (29%), Positives = 34/68 (49%), Gaps = 2/68 (2%)
Query: 28 PSKPALEVLKSDLEPSKPALEVLKSEWVPSKPALEALKSEWDPHKLFHIFKSNATN-PIV 86
PS P L++L + L P +P+L V V S + L W F + K A + P+
Sbjct: 308 PSDP-LDILIAGLIPDRPSLSVQPGPTVASGENVTLLCQSWRQIDTFFLTKEGAAHPPLC 366
Query: 87 VENRFAFY 94
+++++ FY
Sbjct: 367 LKSKYQFY 374
>M24_STRPY (P12379) M protein, serotype 24 precursor
Length = 539
Score = 31.6 bits (70), Expect = 4.0
Identities = 31/111 (27%), Positives = 50/111 (44%), Gaps = 13/111 (11%)
Query: 20 STAIKTLKPSKPALEVLKSDLEPSKPAL----EVLKSEWVPSKPALEALKSEWDPHKLFH 75
S IKTL+ K ALE K+DLE L + L+ + S+ A + L++E
Sbjct: 280 SAKIKTLEAEKAALEAEKADLEHQSQVLNANRQSLRRDLDASREAKKQLEAEHQ------ 333
Query: 76 IFKSNATNPIVVENRFAF-YDTVSRLAGAKRFDYIEQLLEQQKKLPQSRRE 125
K N I +R + D + K+ + Q LE+Q K+ ++ R+
Sbjct: 334 --KLEEQNKISEASRQSLRRDLDASREAKKQLEAEHQKLEEQNKISEASRQ 382
>DXS_NITEU (Q82VD3) 1-deoxy-D-xylulose-5-phosphate synthase (EC
2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP
synthase) (DXPS)
Length = 614
Score = 31.6 bits (70), Expect = 4.0
Identities = 45/200 (22%), Positives = 73/200 (36%), Gaps = 37/200 (18%)
Query: 57 SKPALEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQ 116
+K A E +K P LF F N PI + T++ + ++ + +
Sbjct: 220 AKRAEEHVKGMVTPSTLFEEFGFNYIGPIDGHDLDILLTTLNNIKQLDGPQFLHVVTRKG 279
Query: 117 KKLPQSRREGFVVRIITLYGNAGMIQ---------HALNTFYQM-GDFRCVRTVKSFNAT 166
K Q+ + LY G Q A + Q+ GD+ C K +
Sbjct: 280 KGYKQAEEDPI------LYHGVGKFQPDQGIVSKPSAKLAYTQIFGDWLCDMAAKD-SRL 332
Query: 167 LNVLAKSRDFDEISRFLNEVPRR-FDIRL-DVYSVNIAVKAFCEAEKLKEAYLFMLDCVN 224
+ + R+ + RF E P R FD+ + + ++V A A CE
Sbjct: 333 IGITPAMREGSGLVRFSKEYPDRYFDVGIAEQHAVTFAAGAACE---------------- 376
Query: 225 NKGVKPDVVTYTTLISAFYD 244
G+KP V Y+T + YD
Sbjct: 377 --GLKPVVAIYSTFLQRAYD 394
>CVRA_SHEON (Q8EAZ0) Cell volume regulation protein A homolog
Length = 574
Score = 31.6 bits (70), Expect = 4.0
Identities = 17/57 (29%), Positives = 31/57 (53%), Gaps = 1/57 (1%)
Query: 130 RIITLYGNAGMIQHALNTFYQMGDFRCVR-TVKSFNATLNVLAKSRDFDEISRFLNE 185
RI ++ N ++ + +T + GD CV KS A N+ +++ + DE+SRF +
Sbjct: 443 RIAAVFRNNTLLHPSGSTCLEAGDILCVLGQEKSLEALSNLFSQAPETDEVSRFFGD 499
>YJ9C_YEAST (P47166) Hypothetical 81.2 kDa protein in NMD5-HOM6
intergenic region
Length = 707
Score = 30.8 bits (68), Expect = 6.8
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 4 TSLRSTRTLLKIFAPS----STAIKTLKPSKPALEVLKSDLEPSKPALEVLKSEWVPSKP 59
T+LRS+ TL K S A+ +K + E LKS L+ +LK ++ +
Sbjct: 395 TALRSSETLGKQLEKEKENHSKAVLEVKDLERRAETLKSSLQSISDDYNLLKKKYEIQRS 454
Query: 60 ALEALKSEWDPHK 72
LE ++E PH+
Sbjct: 455 QLEQKENELKPHQ 467
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,914,941
Number of Sequences: 164201
Number of extensions: 1926937
Number of successful extensions: 4911
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4900
Number of HSP's gapped (non-prelim): 23
length of query: 420
length of database: 59,974,054
effective HSP length: 113
effective length of query: 307
effective length of database: 41,419,341
effective search space: 12715737687
effective search space used: 12715737687
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148969.14