BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148918.3 + phase: 0
(1351 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 725 0.0
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 390 e-107
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 182 7e-45
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 178 1e-43
YMD9_YEAST (Q03434) Transposon Ty1 protein B 146 4e-34
YJZ9_YEAST (P47100) Transposon Ty1 protein B 145 1e-33
YMU0_YEAST (Q04670) Transposon Ty1 protein B 144 1e-33
YJZ7_YEAST (P47098) Transposon Ty1 protein B 144 1e-33
YMT5_YEAST (Q04214) Transposon Ty1 protein B 143 3e-33
YME4_YEAST (Q04711) Transposon Ty1 protein B 143 3e-33
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 138 1e-31
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 119 4e-26
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 97 3e-19
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 75 1e-12
YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III 69 7e-11
M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710... 65 2e-09
GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-... 57 3e-07
RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h... 54 2e-06
YCH5_YEAST (P25601) Transposon Ty5-1 16.0 kDa hypothetical protein 53 5e-06
GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-... 53 5e-06
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 725 bits (1872), Expect = 0.0
Identities = 469/1401 (33%), Positives = 709/1401 (50%), Gaps = 151/1401 (10%)
Query: 14 KLNSELDFNYWEFMMTTHLKAHNIWSYVESGLQQGADELARRRDQL-----------ALS 62
K N + F+ W+ M L ++ GL + D +++ D + A S
Sbjct: 10 KFNGDNGFSTWQRRMRDLL--------IQQGLHKVLDVDSKKPDTMKAEDWADLDERAAS 61
Query: 63 QILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERYEMSSSETV 122
I + + I + T++ W L+ + + K +KL L+++ MS
Sbjct: 62 AIRLHLSDDVVNNIIDEDTARGIWTRLESLY--MSKTLTNKLY-LKKQLYALHMSEGTNF 118
Query: 123 DQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTDTLSVAELQ 182
+ ++ ++ G I++ +L ++P YD++ TTIL
Sbjct: 119 LSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHG------------ 166
Query: 183 GSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRGNFRGRGRG 242
K+ + L +V + + E + N G GRGR
Sbjct: 167 ----------------------KTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRS 204
Query: 243 SFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGYYNQERTNNGCFNCGKY 302
R NNY G+ G S NR + R C+NC +
Sbjct: 205 YQRS----------SNNY--------GRSGARGKSKNRSKSRV--------RNCYNCNQP 238
Query: 303 GHKAADCRYKHQANMAENSYQHFGESS----QNQHSLFLASNT------LSEEENIWYLD 352
GH DC + E S Q +++ QN ++ L N LS E+ W +D
Sbjct: 239 GHFKRDCPNPRKGK-GETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVD 297
Query: 353 TGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAP 412
T S+H ++LF TVK GN S I G G I I+ G + DV + P
Sbjct: 298 TAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVP 357
Query: 413 GLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFSCLS 472
L NL+S L Y L G+ V I + +
Sbjct: 358 DLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQ 417
Query: 473 SIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESFPTG 532
I D LWH R GH GL L++K +S + C+ C GK+HR SF T
Sbjct: 418 DEISVD--LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP--CDYCLFGKQHRVSFQTS 473
Query: 533 KSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSFKTF 591
S R +L++V+SD+C +EI + GG +YF+TFIDD SRK WVY LK K + F+ F
Sbjct: 474 -SERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKF 532
Query: 592 KAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTI 649
A VE+++G +K LR+D G EY ++ HGI+H+ T TPQ NGVAER NRTI
Sbjct: 533 HALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTI 592
Query: 650 MDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFG 709
++ VR ML+ ++PK FW EAV TA Y++NR P+ + + PE + + S HL+VFG
Sbjct: 593 VEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFG 652
Query: 710 CIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGMWNW 769
C A+AHVP + R KLDDK CIFIGY Y+L++P KKVI SRDV F E +
Sbjct: 653 CRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTA 712
Query: 770 SSKSQK------------------------------EPIVTPNDYEEEDEHVDTTPDEPD 799
+ S+K E P + E+ E +D +E +
Sbjct: 713 ADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVE 772
Query: 800 EPETSNREKRNRRLPARLQDCVLGTDNDPSDEEIINFALFADCEPVTFEEA---SRDENW 856
P + + R R + + + PS E ++ + D EP + +E
Sbjct: 773 HPTQGEEQHQPLRRSERPR---VESRRYPSTEYVL---ISDDREPESLKEVLSHPEKNQL 826
Query: 857 IKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQK 916
+KAM EE+ +++KN T++L ELP K+P+ KWV+K K ++ RYKARLV KG++QK
Sbjct: 827 MKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQK 886
Query: 917 PGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVV 976
GID+ E+F+PV ++ +IR ++SL+A + ++ Q+DVK+AFL+G LEEE+Y+EQP G+ V
Sbjct: 887 KGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEV 946
Query: 977 RGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVC 1036
GK+ V +L K+LYGLKQAPR WY K DS+ + + + +Y K + +I+
Sbjct: 947 AGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILL 1006
Query: 1037 LYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDG--IFISQKKYA 1094
LYVDD++ G + +IA+ +G + F+M DLG LG+++++++ +++SQ+KY
Sbjct: 1007 LYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYI 1066
Query: 1095 SDILKKFKMEHSKPISTPVEEKLKLTRESDGKRVD------STHYKSLIGSLRY-LTATR 1147
+L++F M+++KP+STP+ LKL+++ V+ Y S +GSL Y + TR
Sbjct: 1067 ERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTR 1126
Query: 1148 PDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAG 1207
PDI + VG++SR++E+P H + K ILRY++GT + + +G SD L GYTD+D AG
Sbjct: 1127 PDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG-GSDPILKGYTDADMAG 1185
Query: 1208 DTETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMH 1267
D + RKS++GY F GAISW SK Q VALST EAEYI AT + +WL+R L+ +
Sbjct: 1186 DIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELG 1245
Query: 1268 HEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIA 1327
Q +YCD++SAI LSKN ++H R+KHID+R+H IRE++ ++ + + T E A
Sbjct: 1246 LHQKEYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPA 1304
Query: 1328 DIFTKPLKIESFYKLKKMLGM 1348
D+ TK + F K+++GM
Sbjct: 1305 DMLTKVVPRNKFELCKELVGM 1325
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 390 bits (1002), Expect = e-107
Identities = 227/589 (38%), Positives = 339/589 (57%), Gaps = 30/589 (5%)
Query: 781 PNDYEEED--EHVDT----TPDEPDEPETSNREKRNRRLPARLQDCVLGTDNDPSDEEII 834
PN+ E + EH+ P + D E NR R+ RL + Q DN + +
Sbjct: 825 PNESRESETAEHLKEIGIDNPTKNDGIEIINR--RSERLKTKPQISYNEEDNSLNKVVLN 882
Query: 835 NFALFADCEPVTFEEAS-RDE--NWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVY 891
+F D P +F+E RD+ +W +A++ E+NA + N TW +T+ P +K + +WV+
Sbjct: 883 AHTIFNDV-PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVF 941
Query: 892 KTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQM 951
KY G RYKARLVA+G+ QK IDY E FAPVAR+ + R ++SL Q N K+HQM
Sbjct: 942 SVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQM 1001
Query: 952 DVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQN 1011
DVK+AFLNGTL+EE+Y+ P G + D V +L KA+YGLKQA R W++ + +
Sbjct: 1002 DVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKEC 1059
Query: 1012 GFQRCPFEHTLYIKFIDPGDV---LIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDL 1068
F + +YI +D G++ + V LYVDD++ + + F+ ++ F MTDL
Sbjct: 1060 EFVNSSVDRCIYI--LDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDL 1117
Query: 1069 GLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPVEEKLK---LTRESDG 1125
+ +F+GI + Q+D I++SQ Y IL KF ME+ +STP+ K+ L + D
Sbjct: 1118 NEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDED- 1176
Query: 1126 KRVDSTHYKSLIGSLRY-LTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLT 1184
+T +SLIG L Y + TRPD+ V +LSRY Q KR+LRY+KGT+
Sbjct: 1177 ---CNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTID 1233
Query: 1185 EGIFYGNN--SDVKLVGYTDSDWAGDTETRKSTSGYAFHL-GTGAISWSSKKQHVVALST 1241
+ + N + K++GY DSDWAG RKST+GY F + I W++K+Q+ VA S+
Sbjct: 1234 MKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASS 1293
Query: 1242 AEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDI 1301
EAEY+ + +WL+ +L ++ + P KIY DN+ I+++ NP H R+KHIDI
Sbjct: 1294 TEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDI 1353
Query: 1302 RFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMMK 1350
++H RE + + +EY PT+ Q+ADIFTKPL F +L+ LG+++
Sbjct: 1354 KYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQ 1402
Score = 241 bits (615), Expect = 1e-62
Identities = 212/849 (24%), Positives = 377/849 (43%), Gaps = 84/849 (9%)
Query: 24 WEFMMTTHLKAHNIWSYVESGLQQGADELARRRDQLALSQILQGIDYSIFGKIANAKTSK 83
W+F + L ++ V+ + D+ ++ ++ A S I++ + S + T++
Sbjct: 19 WKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLSDSFLNFATSDITAR 78
Query: 84 EAWDILKLSHKGVEKAQKSKLQSLRREYERYEMSSSETVDQYFTRVINIVNKMRVYGEDI 143
+ + L ++ K+ S+L +LR+ ++SS ++ +F +++++ G I
Sbjct: 79 QILENLDAVYE--RKSLASQL-ALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKI 135
Query: 144 QDSKVVEKILRTMPMKYDHVVTTILESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEA 203
++ + +L T+P YD ++T I E+ + L++A ++ NR+L++ K+K +
Sbjct: 136 EEMDKISHLLITLPSCYDGIITAI-ETLSEENLTLAFVK-------NRLLDQEIKIKNDH 187
Query: 204 LKSQVNLNNVAESSQMGEARARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNF 263
+ + N + N N +++N + N
Sbjct: 188 NDTSKKVMNAIVHN---------------------------------NNNTYKNNLFKN- 213
Query: 264 NPSHQGKGGNNFGSNNRGRGRGYYNQERTNNGCFNCGKYGHKAADC-RYKHQANMAENSY 322
K F N++ + + C +CG+ GH DC YK N
Sbjct: 214 ---RVTKPKKIFKGNSKYKVK-----------CHHCGREGHIKKDCFHYKRILNNKNKEN 259
Query: 323 QHFGESSQNQHSLFLAS--NTLSEEENIWY-LDTGCSNHMCGKKELFSSLDETVKSTVKF 379
+ +++ + F+ N S +N + LD+G S+H+ + L++ E V
Sbjct: 260 EKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIA 319
Query: 380 GNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCT 439
I + +RL++ + + DV + NL+S+ +L E +++ K T
Sbjct: 320 VAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVT 379
Query: 440 LIDGNGRFITKVKMSHNRLFPLRIQHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSR 499
I NG + K + L + + + Q +++ N+ LWH RFGH L + R
Sbjct: 380 -ISKNGLMVVK---NSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKR 435
Query: 500 KEYVSG---LPVVKIPSGVCETCQMGKKHRESFPTGKS-WRAKKLLEIVHSDLCSVEIP- 554
K S L +++ +CE C GK+ R F K K+ L +VHSD+C P
Sbjct: 436 KNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPV 495
Query: 555 TPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEY 614
T YF+ F+D F+ Y +K KS+ F+ F A E + L D G+EY
Sbjct: 496 TLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREY 555
Query: 615 LVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVA 672
L F + GI + LT +TPQ NGV+ER RTI + R M+ ++ K FW EAV
Sbjct: 556 LSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVL 615
Query: 673 TAVYILNRCPTKSV--QEKTPEEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGER 730
TA Y++NR P++++ KTP E ++P ++HLRVFG Y H+ ++ + K DDK +
Sbjct: 616 TATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNK-QGKFDDKSFK 674
Query: 731 CIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGMWNWSSKSQKEPIVTPNDYEEEDEH 790
IF+GY N +KL++ +K I++RDV DE M N S + E + + E E+++
Sbjct: 675 SIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVN-SRAVKFETVFLKDSKESENKN 731
Query: 791 VDTTPDEPDEPETSNREKRNRRLPARLQDCVLGTDNDPSDEEIINFALF----ADCEPVT 846
+ + E N K + N P+D I F +C+ +
Sbjct: 732 FPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQ 791
Query: 847 FEEASRDEN 855
F + S++ N
Sbjct: 792 FLKDSKESN 800
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 182 bits (461), Expect = 7e-45
Identities = 91/226 (40%), Positives = 138/226 (60%), Gaps = 1/226 (0%)
Query: 1033 LIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKK 1092
+ + LYVDD++ TG+++ ++ + S F M DLG + YFLGI++ G+F+SQ K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1093 YASDILKKFKMEHSKPISTPVEEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVY 1152
YA IL M KP+STP+ KL + S K D + ++S++G+L+YLT TRPDI Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1153 GVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETR 1212
V ++ + M +P ++ KR+LRY+KGT+ G++ NS + + + DSDWAG T TR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1213 KSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVW 1258
+ST+G+ LG ISWS+K+Q V+ S+ E EY A + W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 178 bits (451), Expect = 1e-43
Identities = 108/303 (35%), Positives = 164/303 (53%), Gaps = 4/303 (1%)
Query: 951 MDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQ 1010
MDV +AFLN T++E +YV+QP G+V D V+ L +YGLKQAP W + I++ +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 1011 NGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGL 1070
GF R EH LY + G + I +YVDDL+ + K+ + + + M DLG
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYI-GVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 119
Query: 1071 MSYFLGIEVIQQKDG-IFISQKKYASDILKKFKMEHSKPISTPVEEKLKLTRESDGKRVD 1129
+ FLG+ + Q +G I +S + Y + + ++ K TP+ L + D
Sbjct: 120 VDKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 179
Query: 1130 STHYKSLIGSLRYLTAT-RPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIF 1188
T Y+S++G L + T RPDI Y V LLSR++ +P HL+ A+R+LRY+ T + +
Sbjct: 180 ITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLK 239
Query: 1189 YGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKK-QHVVALSTAEAEYI 1247
Y + S V L Y D+ + ST GY L ++WSSKK + V+ + + EAEYI
Sbjct: 240 YRSGSQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYI 299
Query: 1248 TAT 1250
TA+
Sbjct: 300 TAS 302
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 146 bits (368), Expect = 4e-34
Identities = 138/526 (26%), Positives = 244/526 (46%), Gaps = 44/526 (8%)
Query: 843 EPVTFEEASRD-ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
E +T+ + ++ E +I+A +E+N + K KTW+ E D+K I K V + + + +
Sbjct: 809 EAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYY-DRKEIDPKRVINSMFIFNKKR 867
Query: 902 D-RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNG 960
D +KAR VA+G Q P + + + +SL+ NN+ I Q+D+ SA+L
Sbjct: 868 DGTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYA 927
Query: 961 TLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEH 1020
++EE+Y+ P G DK+ RLKK+LYGLKQ+ WY+ I SY I ++C E
Sbjct: 928 DIKEELYIRPPPHL---GMNDKLIRLKKSLYGLKQSGANWYETIKSYLI----KQCGMEE 980
Query: 1021 TLYIKFIDPGDVLIVCLYVDDLIFTGN----NSKMIAEFR---GAMISYFEMTDLGLMSY 1073
+ + +CL+VDD+I N K+I + I +D +
Sbjct: 981 VRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYD 1040
Query: 1074 FLGIEVIQQKDGIF-ISQKKYASDILKKFKM---EHSKPISTPVEEKLKLTRESDGKRVD 1129
LG+E+ Q+ + + ++ + K + + +S P + L + + D +D
Sbjct: 1041 ILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYI--DQDELEID 1098
Query: 1130 STHYK-------SLIGSLRYL-TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKG 1181
YK LIG Y+ R D++Y + L++++ P L +++++
Sbjct: 1099 EDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWD 1158
Query: 1182 TLTEGIFYGNNS----DVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVV 1237
T + + + N D KLV +D+ + G+ KS G + L I S K +
Sbjct: 1159 TRDKQLIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLT 1217
Query: 1238 ALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKI---YCDNKSAIALSKNPVFHG 1294
ST EAE +++V L L + E N I D++S I++ K+
Sbjct: 1218 CTSTTEAE----IHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNEEK 1273
Query: 1295 -RSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
R++ + ++R+ ++ + + Y TK+ IAD+ TKPL I++F
Sbjct: 1274 FRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTF 1319
Score = 99.8 bits (247), Expect = 5e-20
Identities = 117/519 (22%), Positives = 198/519 (37%), Gaps = 53/519 (10%)
Query: 351 LDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFY 410
LD+G S + S V NIPI G + +D ++ I V +
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSI-KVLH 91
Query: 411 APGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNG-----RFITKVKMSHNRLFPLRIQH 465
P + ++LLS+ +L+ D K DG ++ +S L P I
Sbjct: 92 TPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISV 151
Query: 466 DQFSCLSSIIPNDDWLW---HMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGV-----CE 517
+ + + + + H H + + Y + ++ + C
Sbjct: 152 PTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQCP 211
Query: 518 TCQMGKKHRESFPTGKSWRAKKLLE---IVHSDLCSVEIPTPGGC-RYFITFIDDFSRKA 573
C +GK + G + + E +H+D+ P YFI+F D+ ++
Sbjct: 212 DCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFR 271
Query: 574 WVYFLKQKSE--AVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQ 629
WVY L + E +D F T AF++ Q + ++ DRG EY T F E++GI
Sbjct: 272 WVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPC 331
Query: 630 LTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEK 689
TT + +GVAER NRT++D R L+ +P W A+ + + N + ++
Sbjct: 332 YTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKS 391
Query: 690 TPEEAGSGRRPSIRHLRVFG--CIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYN 747
+ AG I L FG I H P+ K+ +G + NS Y +Y
Sbjct: 392 ARQHAGLAGL-DISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 748 PETKKVIISRD------------------VTFDEGGMWNWSSKSQKEPIVTPNDYEEEDE 789
P KK + + + +TFDE N + S + I + + +D
Sbjct: 448 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDED--LNRLTASYQSFIASNEIQQSDDL 505
Query: 790 HVDTTPDEPDEPETSNREKRNRRLPARLQDCVLGTDNDP 828
++++ D + E + RN L V TD+ P
Sbjct: 506 NIESDHDFQSDIELHPEQPRN-----VLSKAVSPTDSTP 539
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 145 bits (365), Expect = 1e-33
Identities = 133/522 (25%), Positives = 246/522 (46%), Gaps = 36/522 (6%)
Query: 843 EPVTFEEASRD-ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
E +T+ + ++ E +I+A +E+N + K KTW+ E D+K I K V + + + +
Sbjct: 1236 EAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYY-DRKEIDPKRVINSMFIFNKKR 1294
Query: 902 D-RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNG 960
D +KAR VA+G Q P + + + +SL+ NN+ I Q+D+ SA+L
Sbjct: 1295 DGTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYA 1354
Query: 961 TLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEH 1020
++EE+Y+ P G DK+ RLKK+LYGLKQ+ WY+ I SY I Q+C E
Sbjct: 1355 DIKEELYIRPPPHL---GMNDKLIRLKKSLYGLKQSGANWYETIKSYLI----QQCGMEE 1407
Query: 1021 TLYIKFIDPGDVLIVCLYVDDLIFTGNN--------SKMIAEFRGAMISYFEMTDLGLMS 1072
+ + +CL+VDD++ N K+ ++ +I+ E +D +
Sbjct: 1408 VRGWSCVFKNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGE-SDEEIQY 1466
Query: 1073 YFLGIEVIQQKDGIF-ISQKKYASDILKKFKM---EHSKPISTPVE-----EKLKLTRES 1123
LG+E+ Q+ + + ++ + K + + +S P + ++ +L E
Sbjct: 1467 DILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEE 1526
Query: 1124 DGKRVDSTHYKSLIGSLRYL-TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGT 1182
D ++ + LIG Y+ R D++Y + L++++ P L ++++I T
Sbjct: 1527 DDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNT 1586
Query: 1183 LTEGIFYGNNSDV----KLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVA 1238
+ + + + V KLV +D+ + G+ KS G + L I S K +
Sbjct: 1587 RDKQLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTC 1645
Query: 1239 LSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIA-LSKNPVFHGRSK 1297
ST EAE + L +++ + + T + D+KS I+ + N R++
Sbjct: 1646 TSTTEAEIHAISESVPLLNNLSYLIQELDKKPIT-KGLLTDSKSTISIIISNNEEKFRNR 1704
Query: 1298 HIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
+ ++R+ ++ + + Y TK+ IAD+ TKPL I++F
Sbjct: 1705 FFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1746
Score = 99.4 bits (246), Expect = 6e-20
Identities = 118/519 (22%), Positives = 200/519 (37%), Gaps = 53/519 (10%)
Query: 351 LDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFY 410
LD+G S + S V NIPI G + +D ++ I V +
Sbjct: 460 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSI-KVLH 518
Query: 411 APGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNG-----RFITKVKMSHNRLFPLRIQH 465
P + ++LLS+ +L+ D K DG ++ +S L P I
Sbjct: 519 TPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISV 578
Query: 466 DQFSCLSSIIPNDDWLW---HMRFGHFHFSGLNYLSRKEYVSGLPVVKIP--SGV---CE 517
+ + + + + H H + + Y + ++ + S + C
Sbjct: 579 PTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCP 638
Query: 518 TCQMGKKHRESFPTGKSWRAKKLLE---IVHSDLCSVEIPTPGGC-RYFITFIDDFSRKA 573
C +GK + G + + E +H+D+ P YFI+F D+ ++
Sbjct: 639 DCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFR 698
Query: 574 WVYFLKQKSE--AVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQ 629
WVY L + E +D F T AF++ Q + ++ DRG EY T F E++GI
Sbjct: 699 WVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPC 758
Query: 630 LTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEK 689
TT + +GVAER NRT++D R L+ +P W A+ + + N + ++
Sbjct: 759 YTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKS 818
Query: 690 TPEEAGSGRRPSIRHLRVFG--CIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYN 747
+ AG I L FG I H P+ K+ +G + NS Y +Y
Sbjct: 819 ARQHAGLAGL-DISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYL 874
Query: 748 PETKKVIISRD------------------VTFDEGGMWNWSSKSQKEPIVTPNDYEEEDE 789
P KK + + + +TFDE N + S + I + + +D
Sbjct: 875 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDED--LNRLTASYQSFIASNEIQQSDDL 932
Query: 790 HVDTTPDEPDEPETSNREKRNRRLPARLQDCVLGTDNDP 828
++++ D + E + RN L V TD+ P
Sbjct: 933 NIESDHDFQSDIELHPEQPRN-----VLSKAVSPTDSTP 966
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 144 bits (364), Expect = 1e-33
Identities = 135/526 (25%), Positives = 249/526 (46%), Gaps = 44/526 (8%)
Query: 843 EPVTFEEASRD-ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
E +T+ + ++ E +I+A +E+N + K KTW+ T+ D+K I K V + + + +
Sbjct: 809 EAITYNKDIKEKEKYIQAYHKEVNQLLKMKTWD-TDRYYDRKEIDPKRVINSMFIFNRKR 867
Query: 902 D-RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRML-----ISLSAQNNWKIHQMDVKS 955
D +KAR VA+G Q P + + P + +T+ +SL+ NN+ I Q+D+ S
Sbjct: 868 DGTHKARFVARGDIQHP-----DTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISS 922
Query: 956 AFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQR 1015
A+L ++EE+Y+ P G DK+ RLKK+LYGLKQ+ WY+ I SY I ++
Sbjct: 923 AYLYADIKEELYIRPPPHL---GMNDKLIRLKKSLYGLKQSGANWYETIKSYLI----KQ 975
Query: 1016 CPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGN----NSKMIAEFR---GAMISYFEMTDL 1068
C E + + +CL+VDD+I N K+I + I +D
Sbjct: 976 CGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDN 1035
Query: 1069 GLMSYFLGIEVIQQKDGIF-ISQKKYASDILKKFKM---EHSKPISTPVE-----EKLKL 1119
+ LG+E+ Q+ + + ++ + K + + +S P + ++ +L
Sbjct: 1036 EIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQEL 1095
Query: 1120 TRESDGKRVDSTHYKSLIGSLRYL-TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRY 1178
E D ++ + LIG Y+ R D++Y + L++++ P L ++++
Sbjct: 1096 ELEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQF 1155
Query: 1179 IKGTLTEGIFYGNNSDV----KLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQ 1234
I T + + + + V KLV +D+ + G+ KS G + L I S K
Sbjct: 1156 IWNTRDKQLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKA 1214
Query: 1235 HVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIA-LSKNPVFH 1293
+ ST EAE + L +++ ++ + T + D+KS I+ + N
Sbjct: 1215 SLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPIT-KGLLTDSKSTISIIISNNEEK 1273
Query: 1294 GRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
R++ + ++R+ ++ + + Y TK+ IAD+ TKPL I++F
Sbjct: 1274 FRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1319
Score = 99.4 bits (246), Expect = 6e-20
Identities = 118/519 (22%), Positives = 200/519 (37%), Gaps = 53/519 (10%)
Query: 351 LDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFY 410
LD+G S + S V NIPI G + +D ++ I V +
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSI-KVLH 91
Query: 411 APGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNG-----RFITKVKMSHNRLFPLRIQH 465
P + ++LLS+ +L+ D K DG ++ +S L P I
Sbjct: 92 TPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISV 151
Query: 466 DQFSCLSSIIPNDDWLW---HMRFGHFHFSGLNYLSRKEYVSGLPVVKIP--SGV---CE 517
+ + + + + H H + + Y + ++ + S + C
Sbjct: 152 PTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCP 211
Query: 518 TCQMGKKHRESFPTGKSWRAKKLLE---IVHSDLCSVEIPTPGGC-RYFITFIDDFSRKA 573
C +GK + G + + E +H+D+ P YFI+F D+ ++
Sbjct: 212 DCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFR 271
Query: 574 WVYFLKQKSE--AVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQ 629
WVY L + E +D F T AF++ Q + ++ DRG EY T F E++GI
Sbjct: 272 WVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPC 331
Query: 630 LTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEK 689
TT + +GVAER NRT++D R L+ +P W A+ + + N + ++
Sbjct: 332 YTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKS 391
Query: 690 TPEEAGSGRRPSIRHLRVFG--CIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYN 747
+ AG I L FG I H P+ K+ +G + NS Y +Y
Sbjct: 392 ARQHAGLAGL-DISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 748 PETKKVIISRD------------------VTFDEGGMWNWSSKSQKEPIVTPNDYEEEDE 789
P KK + + + +TFDE N + S + I + + +D
Sbjct: 448 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDED--LNRLTASYQSFIASNEIQQSDDL 505
Query: 790 HVDTTPDEPDEPETSNREKRNRRLPARLQDCVLGTDNDP 828
++++ D + E + RN L V TD+ P
Sbjct: 506 NIESDHDFQSDIELHPEQPRN-----VLSKAVSPTDSTP 539
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 144 bits (364), Expect = 1e-33
Identities = 138/526 (26%), Positives = 243/526 (45%), Gaps = 44/526 (8%)
Query: 843 EPVTFEEASRD-ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
E +T+ + ++ E +I+A +E+N + K KTW+ E D+K I K V + + + +
Sbjct: 1236 EAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYY-DRKEIDPKRVINSMFIFNKKR 1294
Query: 902 D-RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNG 960
D +KAR VA+G Q P + + + +SL+ NN+ I Q+D+ SA+L
Sbjct: 1295 DGTHKARFVARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYA 1354
Query: 961 TLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEH 1020
++EE+Y+ P G DK+ RLKK+ YGLKQ+ WY+ I SY I ++C E
Sbjct: 1355 DIKEELYIRPPPHL---GMNDKLIRLKKSHYGLKQSGANWYETIKSYLI----KQCGMEE 1407
Query: 1021 TLYIKFIDPGDVLIVCLYVDDLIFTGN----NSKMIAEFR---GAMISYFEMTDLGLMSY 1073
+ + +CL+VDD+I N K+I + I +D +
Sbjct: 1408 VRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYD 1467
Query: 1074 FLGIEVIQQKDGIF-ISQKKYASDILKKFKM---EHSKPISTPVEEKLKLTRESDGKRVD 1129
LG+E+ Q+ + + ++ + K + + +S P + L + + D +D
Sbjct: 1468 ILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYI--DQDELEID 1525
Query: 1130 STHYK-------SLIGSLRYL-TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKG 1181
YK LIG Y+ R D++Y + L++++ P L +++++
Sbjct: 1526 EDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWD 1585
Query: 1182 TLTEGIFYGNNS----DVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVV 1237
T + + + N D KLV +D+ + G+ KS G F L I S K +
Sbjct: 1586 TRDKQLIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLT 1644
Query: 1238 ALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKI---YCDNKSAIALSKNPVFHG 1294
ST EAE +++V L L + E N I D++S I++ K+
Sbjct: 1645 CTSTTEAE----IHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNEEK 1700
Query: 1295 -RSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
R++ + ++R+ ++ + + Y TK+ IAD+ TKPL I++F
Sbjct: 1701 FRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTF 1746
Score = 104 bits (260), Expect = 1e-21
Identities = 171/787 (21%), Positives = 292/787 (36%), Gaps = 112/787 (14%)
Query: 87 DILKLSHKGVEKAQKSKLQSLRR-EYERYEMSSSETVDQYFTRVINIVNKMRVYGEDIQD 145
DI+K+ K +EK Q ++ + + S D + T+V NI++++ G I +
Sbjct: 247 DIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINN 306
Query: 146 SKVVEKILRTMPMKYDHVVTTILESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEALK 205
+ I+R + +Y + T H ++VAEL I + I E+ + +
Sbjct: 307 KVACQLIMRGLSGEYKFLRYT---RHRHLNMTVAELFLDIHA----IYEEQQGSRNSKPN 359
Query: 206 SQVNLNNVAESSQMGEARARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNP 265
+ NL++ S+ ++ N + R N + NN +
Sbjct: 360 YRRNLSDEKNDSR--------SYTNTTKPKVIAR-------------NPQKTNN----SK 394
Query: 266 SHQGKGGNNFGSNNRGRGRGYYNQERTNNGCFNCGKYGHKAADCRYKHQANMAENSYQHF 325
S + N SNN T+N + K + KH + Q
Sbjct: 395 SKTARAHNVSTSNN---------SPSTDNDSIS--KSTTEPIQLNNKHDLTLG----QEL 439
Query: 326 GESSQNQHSLFLASNTLSEEENIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNI 385
ES+ N +++ E LD+G S + S V NI
Sbjct: 440 TESTVNH-----TNHSDDELPGHLLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNI 494
Query: 386 PIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGN- 444
PI G + +D ++ I V + P + ++LLS+ +L+ D K DG
Sbjct: 495 PINAIGDLQFHFQDNTKTSI-KVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTV 553
Query: 445 -------GRFITKVKMSHNRLFPLRIQHDQFSCLSSIIPNDDWLW---HMRFGHFHFSGL 494
G F +S L P I + + + + + H H + +
Sbjct: 554 LAPIVQYGDFYW---VSKRYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTI 610
Query: 495 NYLSRKEYVSGLPVVKIP--SGV---CETCQMGKKHRESFPTGKSWRAKKLLE---IVHS 546
Y + ++ + S + C C +GK + G + + E +H+
Sbjct: 611 RYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHT 670
Query: 547 DLCSVEIPTPGGC-RYFITFIDDFSRKAWVYFLKQKSE--AVDSFKTFKAFVEKQSGCPI 603
D+ P YFI+F D+ ++ WVY L + E +D F T AF++ Q +
Sbjct: 671 DIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASV 730
Query: 604 KALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQ 661
++ DRG EY T F E++GI TT + +GVAER NRT++D R L+
Sbjct: 731 LVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSG 790
Query: 662 MPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFG--CIAYAHVPDQ 719
+P W A+ + + N + ++ + AG I L FG I H P+
Sbjct: 791 LPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGL-DISTLLPFGQPVIVNDHNPN- 848
Query: 720 IRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRD------------------VTF 761
K+ +G + NS Y +Y P KK + + + +TF
Sbjct: 849 --SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTF 906
Query: 762 DEGGMWNWSSKSQKEPIVTPNDYEEEDEHVDTTPDEPDEPETSNREKRNRRLPARLQDCV 821
DE N + S + I + E D ++++ D + E + RN L V
Sbjct: 907 DED--LNRLTASYQSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRN-----VLSKAV 959
Query: 822 LGTDNDP 828
TD+ P
Sbjct: 960 SPTDSTP 966
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 143 bits (361), Expect = 3e-33
Identities = 132/522 (25%), Positives = 247/522 (47%), Gaps = 36/522 (6%)
Query: 843 EPVTFEEASRD-ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
E +T+ + ++ E +I+A +E+N + K KTW+ T+ D+K I K V + + + +
Sbjct: 809 EAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWD-TDKYYDRKEIDPKRVINSMFIFNRKR 867
Query: 902 D-RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNG 960
D +KAR VA+G Q P + + + +SL+ NN+ I Q+D+ SA+L
Sbjct: 868 DGTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYA 927
Query: 961 TLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEH 1020
++EE+Y+ P G DK+ RLKK+LYGLKQ+ WY+ I SY I ++C E
Sbjct: 928 DIKEELYIRPPPHL---GMNDKLIRLKKSLYGLKQSGANWYETIKSYLI----KQCGMEE 980
Query: 1021 TLYIKFIDPGDVLIVCLYVDDLIFTGNN--------SKMIAEFRGAMISYFEMTDLGLMS 1072
+ + +CL+VDD++ N K+ ++ +I+ E +D +
Sbjct: 981 VRGWSCVFENSQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLGE-SDEEIQY 1039
Query: 1073 YFLGIEVIQQKDGIF-ISQKKYASDILKKFKM---EHSKPISTPVE-----EKLKLTRES 1123
LG+E+ Q+ + + ++ + K + + +S P + ++ +L E
Sbjct: 1040 DILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEE 1099
Query: 1124 DGKRVDSTHYKSLIGSLRYL-TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGT 1182
D ++ + LIG Y+ R D++Y + L++++ P L ++++I T
Sbjct: 1100 DDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNT 1159
Query: 1183 LTEGIFYGNNSDV----KLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVA 1238
+ + + + V KLV +D+ + G+ KS G + L I S K +
Sbjct: 1160 RDKQLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTC 1218
Query: 1239 LSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIA-LSKNPVFHGRSK 1297
ST EAE + L +++ + + T + D+KS I+ + N R++
Sbjct: 1219 TSTTEAEIHAISESVPLLNNLSYLIQELDKKPIT-KGLLTDSKSTISIIISNNEEKFRNR 1277
Query: 1298 HIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
+ ++R+ ++ + + Y TK+ IAD+ TKPL I++F
Sbjct: 1278 FFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1319
Score = 98.6 bits (244), Expect = 1e-19
Identities = 102/437 (23%), Positives = 172/437 (39%), Gaps = 28/437 (6%)
Query: 351 LDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFY 410
LD+G S + S V NIPI G + +D ++ I V +
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSI-KVLH 91
Query: 411 APGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNG-----RFITKVKMSHNRLFPLRIQH 465
P + ++LLS+ +L+ D K DG ++ +S L P I
Sbjct: 92 TPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISV 151
Query: 466 DQFSCLSSIIPNDDWLW---HMRFGHFHFSGLNYLSRKEYVSGLPVVKIP--SGV---CE 517
+ + + + + H H + + Y + ++ + S + C
Sbjct: 152 PTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCP 211
Query: 518 TCQMGKKHRESFPTGKSWRAKKLLE---IVHSDLCSVEIPTPGGC-RYFITFIDDFSRKA 573
C +GK + G + + E +H+D+ P YFI+F D+ ++
Sbjct: 212 DCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFR 271
Query: 574 WVYFLKQKSE--AVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQ 629
WVY L + E +D F T AF++ Q + ++ DRG EY T F E++GI
Sbjct: 272 WVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPC 331
Query: 630 LTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEK 689
TT + +GVAER NRT++D R L+ +P W A+ + + N + ++
Sbjct: 332 YTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKS 391
Query: 690 TPEEAGSGRRPSIRHLRVFG--CIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYN 747
+ AG I L FG I H P+ K+ +G + NS Y +Y
Sbjct: 392 ARQHAGLAGL-DISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 748 PETKKVIISRDVTFDEG 764
P KK + + + +G
Sbjct: 448 PSLKKTVDTTNYVILQG 464
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 143 bits (361), Expect = 3e-33
Identities = 134/523 (25%), Positives = 243/523 (45%), Gaps = 38/523 (7%)
Query: 843 EPVTFEEASRD-ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
E +T+ + ++ E +I+A +E+N + K TW+ T+ D+K I K V + + + +
Sbjct: 809 EAITYNKDIKEKEKYIEAYHKEVNQLLKMNTWD-TDKYYDRKEIDPKRVINSMFIFNRKR 867
Query: 902 D-RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNG 960
D +KAR VA+G Q P + + + +SL+ NN+ I Q+D+ SA+L
Sbjct: 868 DGTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYA 927
Query: 961 TLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEH 1020
++EE+Y+ P G DK+ RLKK+LYGLKQ+ WY+ I SY I ++C E
Sbjct: 928 DIKEELYIRPPPHL---GMNDKLIRLKKSLYGLKQSGANWYETIKSYLI----KQCGMEE 980
Query: 1021 TLYIKFIDPGDVLIVCLYVDDLIFTGN----NSKMIAEFR---GAMISYFEMTDLGLMSY 1073
+ + +CL+VDD+I N K+I + I +D +
Sbjct: 981 VRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYD 1040
Query: 1074 FLGIEVIQQKDGIF-ISQKKYASDILKKFKM---EHSKPISTPVEEKLKLTRESDGKRVD 1129
LG+E+ Q+ + + ++ + K + + +S P + L + + D +D
Sbjct: 1041 ILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYI--DQDELEID 1098
Query: 1130 STHYK-------SLIGSLRYL-TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKG 1181
YK LIG Y+ R D++Y + L++++ P L +++++
Sbjct: 1099 EDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWD 1158
Query: 1182 TLTEGIFYGNNS----DVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVV 1237
T + + + N D KLV +D+ + G+ KS G + L I S K +
Sbjct: 1159 TRDKQLIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLT 1217
Query: 1238 ALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIA-LSKNPVFHGRS 1296
ST EAE + L +++ ++ + T + D+KS I+ + N R+
Sbjct: 1218 CTSTTEAEIHAISESVPLLNNLSHLVQELNKKPIT-KGLLTDSKSTISIIISNNEEKFRN 1276
Query: 1297 KHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
+ + ++R+ ++ + + Y TK+ IAD+ TKPL I++F
Sbjct: 1277 RFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTF 1319
Score = 99.4 bits (246), Expect = 6e-20
Identities = 118/519 (22%), Positives = 200/519 (37%), Gaps = 53/519 (10%)
Query: 351 LDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFY 410
LD+G S + S V NIPI G + +D ++ I V +
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSI-KVLH 91
Query: 411 APGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNG-----RFITKVKMSHNRLFPLRIQH 465
P + ++LLS+ +L+ D K DG ++ +S L P I
Sbjct: 92 TPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISV 151
Query: 466 DQFSCLSSIIPNDDWLW---HMRFGHFHFSGLNYLSRKEYVSGLPVVKIP--SGV---CE 517
+ + + + + H H + + Y + ++ + S + C
Sbjct: 152 PTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCP 211
Query: 518 TCQMGKKHRESFPTGKSWRAKKLLE---IVHSDLCSVEIPTPGGC-RYFITFIDDFSRKA 573
C +GK + G + + E +H+D+ P YFI+F D+ ++
Sbjct: 212 DCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFR 271
Query: 574 WVYFLKQKSE--AVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQ 629
WVY L + E +D F T AF++ Q + ++ DRG EY T F E++GI
Sbjct: 272 WVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPC 331
Query: 630 LTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEK 689
TT + +GVAER NRT++D R L+ +P W A+ + + N + ++
Sbjct: 332 YTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKS 391
Query: 690 TPEEAGSGRRPSIRHLRVFG--CIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYN 747
+ AG I L FG I H P+ K+ +G + NS Y +Y
Sbjct: 392 ARQHAGLAGL-DISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 748 PETKKVIISRD------------------VTFDEGGMWNWSSKSQKEPIVTPNDYEEEDE 789
P KK + + + +TFDE N + S + I + + +D
Sbjct: 448 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDED--LNRLTASYQSFIASNEIQQSDDL 505
Query: 790 HVDTTPDEPDEPETSNREKRNRRLPARLQDCVLGTDNDP 828
++++ D + E + RN L V TD+ P
Sbjct: 506 NIESDHDFQSDIELHPEQPRN-----VLSKAVSPTDSTP 539
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 138 bits (347), Expect = 1e-31
Identities = 130/528 (24%), Positives = 242/528 (45%), Gaps = 48/528 (9%)
Query: 843 EPVTFEEASRDEN-WIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
E +T+ + +++++ +++A +EI+ + K TW+ T D+ I K V + + + +
Sbjct: 1251 EAITYNKDNKEKDRYVEAYHKEISQLLKMNTWD-TNKYYDRNDIDPKKVINSMFIFNKKR 1309
Query: 902 D-RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNG 960
D +KAR VA+G Q P ++ + + +S++ N++ I Q+D+ SA+L
Sbjct: 1310 DGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYA 1369
Query: 961 TLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEH 1020
++EE+Y+ P G DK+ RL+K+LYGLKQ+ WY+ I SY I C +
Sbjct: 1370 DIKEELYIRPPPHL---GLNDKLLRLRKSLYGLKQSGANWYETIKSYLI----NCCDMQE 1422
Query: 1021 TLYIKFIDPGDVLIVCLYVDDLIFTGN----NSKMIAEFR---GAMISYFEMTDLGLMSY 1073
+ + +CL+VDD+I N K+I + I +D +
Sbjct: 1423 VRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYD 1482
Query: 1074 FLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPVEEKLKLTR---------ESD 1124
LG+E+ Q+ KY ++K E ++ P+ K K R + D
Sbjct: 1483 ILGLEIKYQR-------SKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQD 1535
Query: 1125 GKRVDSTHYK-------SLIGSLRYL-TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRIL 1176
+D YK LIG Y+ R D++Y + L++++ P L ++
Sbjct: 1536 ELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELI 1595
Query: 1177 RYIKGTLTEGIFYGNNS----DVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSK 1232
+++ T + + + N D KLV +D+ + G+ KS G F L I S
Sbjct: 1596 QFMWDTRDKQLIWHKNKPTKPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKST 1654
Query: 1233 KQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVF 1292
K + ST EAE + L +++ + +++ + D++S I++ K+
Sbjct: 1655 KASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQEL-NKKPIIKGLLTDSRSTISIIKSTNE 1713
Query: 1293 HG-RSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
R++ + ++R+ ++ + + Y TK+ IAD+ TKPL I++F
Sbjct: 1714 EKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTF 1761
Score = 97.8 bits (242), Expect = 2e-19
Identities = 114/503 (22%), Positives = 199/503 (38%), Gaps = 43/503 (8%)
Query: 288 NQERTNNGCFNCGKYGHKAADCRYKHQANMAEN----SYQHFGESSQ----NQHSLFLAS 339
N +RTN+ K + A ++ N N S Q+ + ++ Q +
Sbjct: 382 NYQRTNSSKPRAAKAHNIATSSKFSRVNNDHINESTVSSQYLSDDNELSLGQQQKESKPT 441
Query: 340 NTLSEEENI---WYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIR 396
+T+ + + +D+G S + + + +IPI G +
Sbjct: 442 HTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFN 501
Query: 397 LKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDG--------NGRF- 447
++G++ I + P + ++LLS+ +L+ ++ + DG +G F
Sbjct: 502 FQNGTKTSI-KALHTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFY 560
Query: 448 -ITKVKMSHNRLFPLRIQHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGL 506
++K + + + L I + S + P L H GH +F + +K V+ L
Sbjct: 561 WLSKKYLIPSHISKLTINNVNKSKSVNKYPYP--LIHRMLGHANFRSIQKSLKKNAVTYL 618
Query: 507 PVVKIP-----SGVCETCQMGKKHRESFPTGKSWRAKKLLE---IVHSDLCSVEIPTPGG 558
I + C C +GK + G + ++ E +H+D+ P
Sbjct: 619 KESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKS 678
Query: 559 C-RYFITFIDDFSRKAWVYFLKQKSEA--VDSFKTFKAFVEKQSGCPIKALRTDRGQEYL 615
YFI+F D+ +R WVY L + E ++ F + AF++ Q + ++ DRG EY
Sbjct: 679 APSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYT 738
Query: 616 VGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVAT 673
T FF GI TT + +GVAER NRT+++ R +L +P W AV
Sbjct: 739 NKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEF 798
Query: 674 AVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFG--CIAYAHVPDQIRKKLDDKGERC 731
+ I N + + + AG I + FG I H PD K+ +G
Sbjct: 799 STIIRNSLVSPKNDKSARQHAGLAGL-DITTILPFGQPVIVNNHNPD---SKIHPRGIPG 854
Query: 732 IFIGYCSNSKAYKLYNPETKKVI 754
+ NS Y +Y P KK +
Sbjct: 855 YALHPSRNSYGYIIYLPSLKKTV 877
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 119 bits (299), Expect = 4e-26
Identities = 116/465 (24%), Positives = 197/465 (41%), Gaps = 35/465 (7%)
Query: 904 YKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLE 963
YKAR+V +G Q P Y + + I++ + ++ N + +D+ AFL LE
Sbjct: 1337 YKARIVCRGDTQSPDT-YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLE 1395
Query: 964 EEVYVEQPAGYVVRGKEDK--VYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHT 1021
EE+Y+ P D+ V +L KALYGLKQ+P+ W + Y G + +
Sbjct: 1396 EEIYIPHP--------HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPG 1447
Query: 1022 LYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLM------SYFL 1075
LY L++ +YVDD + +N + + EF + S FE+ G + + L
Sbjct: 1448 LYQT---EDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDIL 1504
Query: 1076 GIEVIQQK--DGIFISQKKYASDILKKFKMEHSK--PISTPVEEKLKLTRESDGKRVDST 1131
G++++ K I ++ K + + + KK+ E K S P K+ + D ++
Sbjct: 1505 GMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEE 1564
Query: 1132 HYKS-------LIGSLRYLT-ATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTL 1183
++ L+G L Y+ R DI + V ++R + P +I++Y+
Sbjct: 1565 EFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRYK 1624
Query: 1184 TEGIFYGN--NSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALST 1241
GI Y N D K++ TD+ G +S G G + S K +S+
Sbjct: 1625 DIGIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCVSS 1683
Query: 1242 AEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDI 1301
EAE + L+ L+ + N + D+K AI + K I
Sbjct: 1684 TEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTWI 1743
Query: 1302 RFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKML 1346
+ I+E I EK + + K IAD+ TKP+ F + ++L
Sbjct: 1744 KTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFKRFIQVL 1788
Score = 103 bits (257), Expect = 3e-21
Identities = 131/582 (22%), Positives = 225/582 (38%), Gaps = 63/582 (10%)
Query: 290 ERTNNGCFNCGKYGHKAADCRYKHQANMA-----------------ENSYQHFGESSQNQ 332
++ N C C H + +C+ K N+ N ++
Sbjct: 336 DQIENSCMYCKSVFHCSINCKKKPNRNLGLTRPISQKPIIYKVHRDNNHLSPVQNEQKSW 395
Query: 333 HSLFLASNTLSEEENIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQ 392
+ SN + + + +DTG ++ K L + +++ +ST FG N + KG
Sbjct: 396 NKTQKRSNKVYNSKKLVIIDTGSGVNITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGY 455
Query: 393 IAIRLKDGSQNFIGD---VFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFIT 449
I++K+G N +Y P ++S L++K M + + Y L G I
Sbjct: 456 GYIKIKNGHNNTDNKCLLTYYVPEEESTIISCYDLAKKT-KMVLSRKYTRL----GNKII 510
Query: 450 KVKMS------HNRLFPLRIQHDQFSCLSSIIPNDDWLW------------HMRFGHFHF 491
K+K H ++ L + S +++I P + H R GH
Sbjct: 511 KIKTKIVNGVIHVKMNELIERPSDDSKINAIKPTSSPGFKLNKRSITLEDAHKRMGHTGI 570
Query: 492 SGL-NYLSRKEYVSGLPVVKIPSGV-CETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLC 549
+ N + Y L ++K P+ C+TC++ K + + TG E S
Sbjct: 571 QQIENSIKHNHYEESLDLIKEPNEFWCQTCKISKATKRNHYTGSMNNHSTDHEPGSSWCM 630
Query: 550 SVEIPTPGGC----RYFITFIDDFSRKAWV--YFLKQKSEAVDSFKTFKAFVEKQSGCPI 603
+ P RY + +D+ +R +F K + + +VE Q +
Sbjct: 631 DIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQYVETQFDRKV 690
Query: 604 KALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQ 661
+ + +DRG E+ ++F GI H LT+ NG AER RTI+ +L+
Sbjct: 691 REINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIITDATTLLRQSN 750
Query: 662 MPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFGCIAYAHVPDQIR 721
+ +FW AV +A I N KS K P +A S + ++R + + +
Sbjct: 751 LRVKFWEYAVTSATNIRNYLEHKST-GKLPLKAISRQPVTVRLMSFLPFGEKGIIWNHNH 809
Query: 722 KKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFD----EGGMWNWSSKSQKEP 777
KKL G I + NS YK + P K++ S + T +G + N + ++
Sbjct: 810 KKLKPSGLPSIILCKDPNSYGYKFFIPSKNKIVTSDNYTIPNYTMDGRVRNTQNINKSHQ 869
Query: 778 IVTPNDYEEEDEHVDTTPDEPDEPETSNREKRNRRLPARLQD 819
+ ND EE+ T E E N E N+ + RL+D
Sbjct: 870 FSSDNDDEEDQIETVTNLCEALE----NYEDDNKPI-TRLED 906
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 97.1 bits (240), Expect = 3e-19
Identities = 45/101 (44%), Positives = 67/101 (65%)
Query: 843 EPVTFEEASRDENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEID 902
EP + A +D W +AM EE++A+ +NKTW L P ++ +G KWV+KTK G +D
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 903 RYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQ 943
R KARLVAKG+ Q+ GI + E ++PV R TIR +++++ Q
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 75.1 bits (183), Expect = 1e-12
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 1142 YLTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYT 1201
YLT TRPD+ + V LS++ + +Q ++L Y+KGT+ +G+FY SD++L +
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 1202 DSDWAGDTETRKSTSGY 1218
DSDWA +TR+S +G+
Sbjct: 62 DSDWASCPDTRRSVTGF 78
>YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III
Length = 2186
Score = 69.3 bits (168), Expect = 7e-11
Identities = 72/218 (33%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 484 MRFGHFHFSGL-NYLSRKEYVSGLPV-VKIPSGVCETCQMGKKHRESFPTGKSWRAKKLL 541
M GHF + + RK Y + V V+ C C H + + +R L
Sbjct: 1476 MLAGHFGIKKMWRMVHRKFYWPQMRVCVENCVRTCAKCLCANDHSKLTSSLTPYRMTFPL 1535
Query: 542 EIVHSDLCSVEIPTPGGCRYFITFIDDFSRKAW-VYFLKQKSEAVDSFKTFKAFVEK--- 597
EIV DL V + G RY +T ID F++ V +K+E V KAFVE+
Sbjct: 1536 EIVACDLMDVGLSVQGN-RYILTIIDLFTKYGTAVPIPDKKAETV-----LKAFVERWAI 1589
Query: 598 -QSGCPIKALRTDRGQEYLVG--TDFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVR 654
+ P+K L TD+G+E++ G F I+H T Y + NG ER N+TIM +
Sbjct: 1590 GEGRIPLKLL-TDQGKEFVNGLFAQFTHMLKIEHITTKGYNSRANGAVERFNKTIMHI-- 1646
Query: 655 CMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPE 692
M K +P E W + V AVY N C V E T E
Sbjct: 1647 -MKKKTAVPME-WDDQVVYAVYAYNNC----VHENTGE 1678
>M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710
(ORF120)
Length = 120
Score = 64.7 bits (156), Expect = 2e-09
Identities = 34/84 (40%), Positives = 49/84 (57%)
Query: 646 NRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHL 705
NRTI++ VR ML +PK F A+A TAV+I+N+ P+ ++ P+E P+ +L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 706 RVFGCIAYAHVPDQIRKKLDDKGE 729
R FGC+AY H + K KGE
Sbjct: 62 RRFGCVAYIHCDEGKLKPRAKKGE 85
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-)
(Germline helicase-2)
Length = 974
Score = 57.4 bits (137), Expect = 3e-07
Identities = 31/81 (38%), Positives = 39/81 (47%), Gaps = 3/81 (3%)
Query: 232 GRGNFRGRGRGSFRGRGRGN-FNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGYYNQE 290
GR F G G G G G F+ N + + N G G FG N+ G G G Q+
Sbjct: 306 GRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQD 365
Query: 291 R--TNNGCFNCGKYGHKAADC 309
R NN CFNC + GH++ DC
Sbjct: 366 RGERNNNCFNCQQPGHRSNDC 386
Score = 49.3 bits (116), Expect = 7e-05
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 214 AESSQMGEARARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQ--WRDNNYNNFNPSHQGKG 271
A + G +A G + G G G G G GN ++ + F + G
Sbjct: 173 AGGTGFGSGKAGGTGFGGNSNSGSGFGSGLTNGFGSGNNHESGFGGGKSGGFGGGNSGGS 232
Query: 272 GNNFGSNNRGRGRGYYNQER--TNNGCFNCGKYGHKAADC 309
G G N+ G G G Q+R NN CFNC + GH++ DC
Sbjct: 233 GFGSGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDC 272
Score = 35.4 bits (80), Expect = 1.1
Identities = 22/71 (30%), Positives = 30/71 (41%), Gaps = 3/71 (4%)
Query: 240 GRGSFR-GRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGYYNQERTNNGCFN 298
GR F G G GN + N F + + F N +G G GCFN
Sbjct: 420 GRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF--NCKGEGHRSAECPEPPRGCFN 477
Query: 299 CGKYGHKAADC 309
CG+ GH++ +C
Sbjct: 478 CGEQGHRSNEC 488
Score = 33.1 bits (74), Expect = 5.3
Identities = 35/111 (31%), Positives = 41/111 (36%), Gaps = 18/111 (16%)
Query: 211 NNVAESSQMGEARARDNFNNG---GRGNFRGRGRGSFRGRGRGNFNQ----WRDNN---- 259
NN A + + F G G GN G G G+ G G G+ N + NN
Sbjct: 7 NNTAAAKTISFGSNPSGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSGFGGNNNVGP 66
Query: 260 -YNNFNPSHQG-----KGGNNFGSNNR-GRGRGYYNQERTNNGCFNCGKYG 303
+ N N G GG FGS N G G G N T G N G G
Sbjct: 67 RFGNGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTG 117
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2
homolog 1 (hnRNP A2(A))
Length = 346
Score = 54.3 bits (129), Expect = 2e-06
Identities = 46/154 (29%), Positives = 62/154 (39%), Gaps = 14/154 (9%)
Query: 136 MRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTDTLSVAELQGSIESHVNRILEK 195
+R Y E+ +E I K + HD V + +I H + +
Sbjct: 116 LREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA 175
Query: 196 TEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQW 255
K +E Q NN + G++R NF +G GNFRG G GRG G
Sbjct: 176 LSK--QEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYG----- 228
Query: 256 RDNNYNNFNPSHQGKGGNNFG---SNNRGRGRGY 286
DN YN + G+GG N+G S GRG GY
Sbjct: 229 -DNGYNGYG---GGQGGGNYGGGPSYGGGRGGGY 258
>YCH5_YEAST (P25601) Transposon Ty5-1 16.0 kDa hypothetical protein
Length = 146
Score = 53.1 bits (126), Expect = 5e-06
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 319 ENSYQHFGESSQNQHSLFLASNTLSEEENIWYLDTGCSNHMCGKKELFSSLDETVKSTVK 378
E Q G+ + L+S + + + W DTGC++HMC + +FSS + +
Sbjct: 49 ETQGQTAGQITPKSWLCMLSSTVPATKSSEWIFDTGCTSHMCHDRSIFSSFTRSSRKDFV 108
Query: 379 FGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSM 421
G +IPI G G + I + DV Y P L NL+S+
Sbjct: 109 RGVGGSIPIMGSGTVNIGTVQ-----LHDVSYVPDLPVNLISV 146
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-)
(Germline helicase-1)
Length = 763
Score = 53.1 bits (126), Expect = 5e-06
Identities = 31/94 (32%), Positives = 41/94 (42%), Gaps = 18/94 (19%)
Query: 216 SSQMGEARARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNF 275
SS G + A F +G + + G G G F G G G GG +F
Sbjct: 98 SSGFGGSTATSGFGSGEKSSAFG-GSGGFGGSATGF-----------------GSGGGSF 139
Query: 276 GSNNRGRGRGYYNQERTNNGCFNCGKYGHKAADC 309
G N G G G + NN CFNC + GH+++DC
Sbjct: 140 GGGNSGFGEGGHGGGERNNNCFNCQQPGHRSSDC 173
Score = 36.6 bits (83), Expect = 0.48
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 19/81 (23%)
Query: 238 GRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRG-------RGRGYYNQE 290
GR G G G GN N N G GG G RG +G G+ + E
Sbjct: 207 GRTGGFGGGAGFGN---------NGGNDGFGGDGGFG-GGEERGPMKCFNCKGEGHRSAE 256
Query: 291 --RTNNGCFNCGKYGHKAADC 309
GCFNCG+ GH++ +C
Sbjct: 257 CPEPPRGCFNCGEQGHRSNEC 277
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,781,219
Number of Sequences: 164201
Number of extensions: 7709464
Number of successful extensions: 23919
Number of sequences better than 10.0: 302
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 21548
Number of HSP's gapped (non-prelim): 1108
length of query: 1351
length of database: 59,974,054
effective HSP length: 122
effective length of query: 1229
effective length of database: 39,941,532
effective search space: 49088142828
effective search space used: 49088142828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)
Medicago: description of AC148918.3