BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148819.5 - phase: 0 
         (83 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran...    46  2e-05
PCL1_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5)      29  1.9
NEB2_RAT (O35274) Neurabin-II (Neural tissue-specific F-actin bi...    28  3.2

>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
          transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
          Reverse transcriptase (EC 2.7.7.49); Endonuclease]
          Length = 1328

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 25/80 (31%), Positives = 40/80 (49%)

Query: 2  GTKWDIEKFIGDSDFGLWKVKIEVVLIQQKCAKARKGKILFSDTMSQEDKTKMADNARSF 61
          G K+++ KF GD+ F  W+ ++  +LIQQ   K         DTM  ED   + + A S 
Sbjct: 3  GVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASA 62

Query: 62 FVLCLRDKVLREVVKDTTIK 81
            L L D V+  ++ + T +
Sbjct: 63 IRLHLSDDVVNNIIDEDTAR 82


>PCL1_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5)
          Length = 505

 Score = 29.3 bits (64), Expect = 1.9
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 2   GTKWDIEKFIGD-----SDFGLWKVKIEVVLIQQKCAKARKGKILFSDTMSQEDKTK 53
           G   DI  F+G      SD GLW V+    L+     +A K  ++    M  E+KTK
Sbjct: 226 GQSTDINAFVGAVSLSCSDSGLWAVEGGNKLVCSGLLQASKSNLISGSVMYIEEKTK 282


>NEB2_RAT (O35274) Neurabin-II (Neural tissue-specific F-actin
           binding protein II) (Protein phosphatase 1 regulatory
           subunit 9B) (Spinophilin) (p130) (PP1bp134)
          Length = 817

 Score = 28.5 bits (62), Expect = 3.2
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 14  SDFGLWKVKIEVVLIQQKCAKARKGKILFSDTMSQEDKTKMADNARSFFVLCLRD 68
           +D GL K+ I V  + +  A  R G+I  +D + + D T +    +SF    LR+
Sbjct: 517 ADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 571


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.323    0.137    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,552,201
Number of Sequences: 164201
Number of extensions: 251873
Number of successful extensions: 747
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 745
Number of HSP's gapped (non-prelim): 3
length of query: 83
length of database: 59,974,054
effective HSP length: 59
effective length of query: 24
effective length of database: 50,286,195
effective search space: 1206868680
effective search space used: 1206868680
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)