BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148651.5 + phase: 0
(496 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EAE_CITFR (Q07591) Intimin (Attaching and effacing protein) (Eae... 38 0.053
YD87_METJA (Q58782) Hypothetical UPF0272 protein MJ1387 37 0.12
MYSQ_DROME (P35416) Paramyosin, short form (Miniparamyosin) 36 0.20
MYSP_DROME (P35415) Paramyosin, long form 36 0.20
G101_HUMAN (Q96P66) Probable G protein-coupled receptor GPR101 36 0.20
MAE1_HUMAN (Q15691) Microtubule-associated protein RP/EB family ... 35 0.34
IFA2_CAEEL (O02365) Intermediate filament protein ifa-2 (Interme... 34 0.99
YJ13_SCHPO (O13681) Hypothetical protein C737.03c in chromosome III 33 1.3
IFA4_CAEEL (P90900) Intermediate filament protein ifa-4 (Interme... 33 1.3
YAYB_SCHPO (Q10218) Hypothetical protein C4H3.11c in chromosome I 33 1.7
SCP2_HUMAN (Q9BX26) Synaptonemal complex protein 2 (SCP-2 protei... 33 1.7
YF65_STRPN (Q97PN8) Hypothetical UPF0052 protein SP1565 33 2.2
Z265_MOUSE (Q9R020) Zinc finger protein 265 (Zinc finger, splici... 32 2.9
YI73_AQUAE (O67720) Hypothetical protein AQ_1873 32 3.8
RIR1_BUCAP (Q8K9W3) Ribonucleoside-diphosphate reductase alpha c... 32 3.8
GAS3_YEAST (Q03655) Glycolipid anchored surface protein 3 precursor 32 3.8
YQY1_CAEEL (Q09560) Hypothetical protein F36G3.1 in chromosome X 32 4.9
YAN9_SCHPO (Q10074) Hypothetical protein C3H1.09c in chromosome I 32 4.9
KPRS_SULTO (Q973F3) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 32 4.9
ANT1_ONCVO (P21249) Major antigen 32 4.9
>EAE_CITFR (Q07591) Intimin (Attaching and effacing protein) (Eae
protein)
Length = 936
Score = 38.1 bits (87), Expect = 0.053
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 100 PADINKENTDSANREDHVVENSEYAVKHENDVKKSDILSRAVPLGLN--EFKSRAISSKV 157
P +N+ T S +R D V N+ + D KK DILS +P +N E + I V
Sbjct: 418 PQYVNELRTLSGSRYDLVQRNNNIIL----DYKKQDILSMNIPHNINGTEHSTHKIQLIV 473
Query: 158 KSGTGQSRSV----IHRLEPGGAEYNYASASKGAKVLGSNKEGKGASNILSRDKDKYLRN 213
KS G R V R + G +++ A + + +G SN+ + Y RN
Sbjct: 474 KSKYGLERIVWDDSTLRTQGGQIQHSERKAHNDYQAI-LPAYVQGGSNVYKVTRRAYDRN 532
Query: 214 PCSVVG-KFVIMELSEETLVDTIEIANFEHHSSNLK 248
S + I LS +VD + I NF ++ K
Sbjct: 533 GNSSNNVQLTITVLSNGQVVDKVGITNFTADKTSAK 568
>YD87_METJA (Q58782) Hypothetical UPF0272 protein MJ1387
Length = 379
Score = 37.0 bits (84), Expect = 0.12
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 387 PVEEIRQQVGRMPGDTVLKILMQKVRTLDVNLFVLERYMEDLNSRYVNIFKDYSK---DT 443
P IR V R + V KI+M++ +L V +F +ER D + + +F + +
Sbjct: 280 PAYTIRAIVDRDIAEEVAKIIMRETGSLGVRIFDIERITADREFKTIKLFDESVRLKVGR 339
Query: 444 GEKDIVLQKIK-EDIKNLIDHQDVIAKDASDLIS 476
+I+ QK + ED+KN+ + KD LI+
Sbjct: 340 VNDEIISQKPEFEDLKNIAKKYGIPLKDLYKLIN 373
>MYSQ_DROME (P35416) Paramyosin, short form (Miniparamyosin)
Length = 640
Score = 36.2 bits (82), Expect = 0.20
Identities = 39/159 (24%), Positives = 66/159 (40%), Gaps = 32/159 (20%)
Query: 358 KKPLEGINSVPASD---------ISSSKHETANIKVPDPVEEIRQQVGRMPG-DTVLKIL 407
K LE SV ASD IS +++ +++ VE++ ++ R+ +T+ K L
Sbjct: 418 KSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSL 477
Query: 408 MQKVRTLDVNLFV----------------------LERYMEDLNSRYVNIFKDYSKDTGE 445
+V+ L + L LE +E+ R+ K K
Sbjct: 478 EVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERT 537
Query: 446 KDIVLQKIKEDIKNLIDHQDVIAKDASDLISWKSQVSSQ 484
VL + +ED KNLI QD + K + + ++ Q+S Q
Sbjct: 538 VKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQ 576
>MYSP_DROME (P35415) Paramyosin, long form
Length = 879
Score = 36.2 bits (82), Expect = 0.20
Identities = 39/159 (24%), Positives = 66/159 (40%), Gaps = 32/159 (20%)
Query: 358 KKPLEGINSVPASD---------ISSSKHETANIKVPDPVEEIRQQVGRMPG-DTVLKIL 407
K LE SV ASD IS +++ +++ VE++ ++ R+ +T+ K L
Sbjct: 657 KSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSL 716
Query: 408 MQKVRTLDVNLFV----------------------LERYMEDLNSRYVNIFKDYSKDTGE 445
+V+ L + L LE +E+ R+ K K
Sbjct: 717 EVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERT 776
Query: 446 KDIVLQKIKEDIKNLIDHQDVIAKDASDLISWKSQVSSQ 484
VL + +ED KNLI QD + K + + ++ Q+S Q
Sbjct: 777 VKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQ 815
>G101_HUMAN (Q96P66) Probable G protein-coupled receptor GPR101
Length = 508
Score = 36.2 bits (82), Expect = 0.20
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 103 INKENTDSANREDHVVENSEYAVKHENDVKKSDILSRAVPLGLNEFKSRAISSKVKSGTG 162
+ E+ + A +++ + SE+ +HE +VK + G E K ++ +K + TG
Sbjct: 242 VENEDEEGAEKKEEFQDESEFRRQHEGEVKAKE--------GRMEAKDGSLKAK-EGSTG 292
Query: 163 QSRSVIHRLEPGGAEYNYASASKGAKVLGSNKEG--KGASNILSRDKDKYLRNPCSVVGK 220
S S + E G+E S++ + KEG K N + DK + N CS+
Sbjct: 293 TSESSV---EARGSEEVRESSTVASDGSMEGKEGSTKVEENSMKADKGRTEVNQCSIDLG 349
Query: 221 FVIMELSEETL---VDTIEIAN 239
ME E+ + D +E N
Sbjct: 350 EDDMEFGEDDINFSEDDVEAVN 371
>MAE1_HUMAN (Q15691) Microtubule-associated protein RP/EB family
member 1 (APC-binding protein EB1)
Length = 267
Score = 35.4 bits (80), Expect = 0.34
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 358 KKPLEGINSVPASDISSSKHETANIKVPDPVEEIRQQVGRMPGDTVLKILMQKVRTLDVN 417
KKPL ++ P IS+ + A P V R+ G GD LMQ+V L +
Sbjct: 149 KKPLTSSSAAPQRPISTQRTAAAPKAGPGVV---RKNPGVGNGDDEAAELMQQVNVLKLT 205
Query: 418 LFVLERYMEDLNSRYVNIFKDYSKDTGEKDIVLQKI 453
+ LE+ + + NI ++ GE D VLQ+I
Sbjct: 206 VEDLEKERDFYFGKLRNIELICQENEGENDPVLQRI 241
>IFA2_CAEEL (O02365) Intermediate filament protein ifa-2
(Intermediate filament protein A2) (IF-A2) (Cel IF A2)
Length = 581
Score = 33.9 bits (76), Expect = 0.99
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 392 RQQVGRMPGDTVLKILMQKVRTLDVNLFVLERYMEDLNSRYVNIFKDYSKDTGEKDIVLQ 451
+++V R+ T L QK+ L+ +LE+ +EDLN + + + Y +KD ++
Sbjct: 326 KEEVKRLRNQT--SELRQKLSDLESRNLLLEKQIEDLNYQLEDDQRSYEAALNDKDAQIR 383
Query: 452 KIKEDIKNLI 461
K++E+ + L+
Sbjct: 384 KLREECQALM 393
>YJ13_SCHPO (O13681) Hypothetical protein C737.03c in chromosome III
Length = 615
Score = 33.5 bits (75), Expect = 1.3
Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 99 VPADINKENTDSANREDHVVENSEYAVKHENDVKKSDILSRAVPLGLNEFKSRAISSKVK 158
VP ++ + DS + + + S++++ +K +++ + +P ++ KS A K
Sbjct: 459 VPQEVGNKVNDSIHTTSN--QPSKFSLNPSISLKGDNVIEKNLPFSVSTLKSTAKKDTGK 516
Query: 159 SGTGQSRSVIHRLEPGGAEYNYASASKGAKVLGSNKEGKGASNILSRDK 207
+G GQ+R + + EP E ++ SK + E N+L R++
Sbjct: 517 AGDGQNREI--QNEPVSLESHF---SKSLALQNDPTEVIQVKNVLHRNR 560
>IFA4_CAEEL (P90900) Intermediate filament protein ifa-4
(Intermediate filament protein A4) (IF-A4) (Cel IF A4)
Length = 575
Score = 33.5 bits (75), Expect = 1.3
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 392 RQQVGRMPGDTVLKILMQKVRTLDVNLFVLERYMEDLNSRYVNIFKDYSKDTGEKDIVLQ 451
R++V R+ T L + K+ L+ +LE+ +EDLN + + Y + +KD +
Sbjct: 325 REEVKRLR--TTLGDMRGKMADLEGRNLLLEKQIEDLNYQMEEDMRSYEQSLNDKDTSIN 382
Query: 452 KIKEDIKNLI 461
K++++ K L+
Sbjct: 383 KLRDESKILM 392
>YAYB_SCHPO (Q10218) Hypothetical protein C4H3.11c in chromosome I
Length = 783
Score = 33.1 bits (74), Expect = 1.7
Identities = 44/179 (24%), Positives = 72/179 (39%), Gaps = 36/179 (20%)
Query: 28 DGSEELSVGLSKWNEVNHGFCEISDTADKYFIKEIDACFPSEALIYSKAGDAEA-NGLVN 86
+GSEE+S+ S+++++ +SD D F KE A P S G+ A + +N
Sbjct: 569 EGSEEISLD-SEYSDI------LSDDGD--FEKEKQATLPRRRSSSSMKGNKLAEDSYLN 619
Query: 87 ES---------HNGRESGAYAVPADINKENTDS--ANREDHVVENS-------------- 121
E+ HNG E G VP + N+E + +H++ S
Sbjct: 620 EAGFDWNQGTFHNGSEFGTTGVPDEPNEEELPKHVLKQVEHIINESAAHGVGKCNACHAR 679
Query: 122 -EYAVKHENDVKKSDILSRAVPLGLNEFKSRAISSKVKSGTGQSRSVIHRLEPGGAEYN 179
E ++ E V S+ L L ++ S A+ + V T + + R E YN
Sbjct: 680 QEDLIRGEQKVSHSNCLYADQTLRPSQPPSEALKTVVNQLTNELMELKKRYEKLSDRYN 738
>SCP2_HUMAN (Q9BX26) Synaptonemal complex protein 2 (SCP-2 protein)
(Synaptonemal complex lateral element protein) (hsSCP2)
Length = 1530
Score = 33.1 bits (74), Expect = 1.7
Identities = 67/337 (19%), Positives = 137/337 (39%), Gaps = 40/337 (11%)
Query: 34 SVGLSKWNEVNHGFCEISDTADKYFIKEIDACFPSEALIYSKAGDAEANGLVNESHNGRE 93
S+ L++ + ++ + ++S + + EI++ +E I SK ++ +++S GRE
Sbjct: 1204 SLVLTQETQNSNSYSDVSSYSSEERFMEIESPHINENYIQSKREESHLASSLSKSSEGRE 1263
Query: 94 SGAYAVPADINKEN--TDSANR-----EDHVVENSEYAVKHENDVKKSDILSRAVPLGLN 146
+ +P D + T +R ED++ ++E ++ + + + + + + +
Sbjct: 1264 KTWFDMPCDATHVSGPTQHLSRKRIYIEDNLSNSNEVEMEEKGERRANLLPKKLCKIEDA 1323
Query: 147 EFKSRAISSKVKSGTGQSRSV---IHRLEPGGAEYNYASASKGAKVLGSNKEGKGASNIL 203
+ +S V S + S+ + E G E Y + + N E K +NI
Sbjct: 1324 DHHIHKMSESVSSLSTNDFSIPWETWQNEFAGIEMTYETYER------LNSEFKRRNNIR 1377
Query: 204 S-----------RDKDKYLRNPCSVVGKFVIMELSEETLVDTIEIANFEHHSSNLKDFEI 252
+ ++LR I +L + + E+ NFE S +LKD E
Sbjct: 1378 HKMLSYFTTQSWKTAQQHLRTMNHQSQDSRIKKLDKFQFIIIEELENFEKDSQSLKDLEK 1437
Query: 253 HGSLNFPTNVWD-LLGNFTASNVRHAQRFVLKEPKWVRYLKLNLQSH---YGSEFYCTLS 308
+ W+ + F+A QR L + + + N S + SE
Sbjct: 1438 EF-----VDFWEKIFQKFSAYQKSEQQRLHLLKTSLAKSVFCNTDSEETVFTSEMCLMKE 1492
Query: 309 VVEVFGVDAVERML-EDLINTQDNLLA---SGEGNAD 341
++V ++ ML E+L+N + L++ S E NA+
Sbjct: 1493 DMKVLQDRLLKDMLEEELLNVRRELMSVFMSHERNAN 1529
>YF65_STRPN (Q97PN8) Hypothetical UPF0052 protein SP1565
Length = 325
Score = 32.7 bits (73), Expect = 2.2
Identities = 30/126 (23%), Positives = 63/126 (49%), Gaps = 7/126 (5%)
Query: 317 AVERMLEDLINTQDNLLASGEGNADKTILPHPDPAVIEHVHKKPLEGINSVP-ASDISSS 375
A R+++ ++ + +++ G G+ +ILP+ VI+ + + LE + +I +
Sbjct: 173 ASRRVVQTIL--ESDMIVLGPGSLFTSILPN---IVIKEIGRALLETKAEIAYVCNIMTQ 227
Query: 376 KHETANIKVPDPVEEIRQQVGRMPGDTVLKILMQKVRTLDVNLFVLERYMEDLNSRYVNI 435
+ ET + D VE + + +GR DTVL + ++KV +N + Y+ + +V +
Sbjct: 228 RGETEHFTDSDHVEVLHRHLGRPFIDTVL-VNIEKVPQEYMNSNRFDEYLVQVEHDFVGL 286
Query: 436 FKDYSK 441
K S+
Sbjct: 287 CKQVSR 292
>Z265_MOUSE (Q9R020) Zinc finger protein 265 (Zinc finger, splicing)
(Fragment)
Length = 326
Score = 32.3 bits (72), Expect = 2.9
Identities = 34/128 (26%), Positives = 59/128 (45%), Gaps = 15/128 (11%)
Query: 101 ADINKENTDSANREDHVVENSEYAVKHENDVKKSDILSRAVPLGLNEFKSRAISSKVKSG 160
AD++K N D++ ED + S + ++ S SR+ + +SR+ S S
Sbjct: 178 ADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRS--SSPSSSRSRSRSRSRSSS 235
Query: 161 TGQSRSVIHRLEPGGAEYNYASASKGAKVLGSNKEGKGASNILSRDKD--KYLRNPCSVV 218
+ QSRS G E+ S S+G+K S + +L ++KD + LR+
Sbjct: 236 SSQSRS-----HSGSREH---SRSRGSK---SRSSSRSTGALLPQEKDLIRVLRHLLKET 284
Query: 219 GKFVIMEL 226
G+ V ++L
Sbjct: 285 GRGVALDL 292
>YI73_AQUAE (O67720) Hypothetical protein AQ_1873
Length = 407
Score = 32.0 bits (71), Expect = 3.8
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 49 EISDTADKYFIKEIDACFPSEALIYSKAGDAEANGLVNESHNGRESGAYAVPAD------ 102
E+ +K+FI +D FP D E L N+S R++GA A+ +
Sbjct: 213 EVPQLREKHFIILVDELFPI---------DVEKINLPNKSTLNRDAGAEAIAEEVEKVAQ 263
Query: 103 -INKENTDSANREDHVVENSEYAVKHENDVKKSDILSRAVPLGLNEFKSRAISSKVKS 159
+ KE S E+ E + E + +I + + K+ AIS+K K+
Sbjct: 264 KVKKEEIKSMETEEVKEEKVREEIPEEVPQEVEEIKEEKPEMSEIKEKTEAISTKEKT 321
>RIR1_BUCAP (Q8K9W3) Ribonucleoside-diphosphate reductase alpha
chain (EC 1.17.4.1) (Ribonucleotide reductase)
Length = 763
Score = 32.0 bits (71), Expect = 3.8
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 83 GLVNESHNGRESGAYAVPADINKENTDSANREDHVVENSEYAVKHENDVKKSDILSRAVP 142
GL+N+ H D+ + +T S D ++E Y V KKS I R++
Sbjct: 470 GLINDLH------------DLKELSTLSVRALDEILEYQNYPVVC---AKKSAISRRSLG 514
Query: 143 LGLNEFKSRAISSKVKSGTGQSRSVIHRLEPGGAEYNYASASKGAKVLGS 192
+G+ F +KV+ G ++++ H+ Y ++ + AK GS
Sbjct: 515 IGVINFAYYLAKNKVRYSDGSAKNLTHKTFEAIQYYLLKASCELAKEKGS 564
>GAS3_YEAST (Q03655) Glycolipid anchored surface protein 3 precursor
Length = 524
Score = 32.0 bits (71), Expect = 3.8
Identities = 25/102 (24%), Positives = 40/102 (38%)
Query: 103 INKENTDSANREDHVVENSEYAVKHENDVKKSDILSRAVPLGLNEFKSRAISSKVKSGTG 162
+N NT + V Y +K+ D S +S LNE A + + T
Sbjct: 403 VNGTNTGKILTDYAVPTTFNYTIKNNKDDTISATISYDKANSLNELDVTATTVAKSASTS 462
Query: 163 QSRSVIHRLEPGGAEYNYASASKGAKVLGSNKEGKGASNILS 204
QS S + +S+S G+ S+ + KG NI++
Sbjct: 463 QSSSRSLTSSTSPSSSTGSSSSTGSSSASSSSKSKGVGNIVN 504
>YQY1_CAEEL (Q09560) Hypothetical protein F36G3.1 in chromosome X
Length = 964
Score = 31.6 bits (70), Expect = 4.9
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 358 KKPLEGINSVPASDISSSKHETANIKVPDPVEEIRQQVGRMPGDTVLKILMQKVRTLDVN 417
+K L INS ++ S+ I++ E QQ + + + L + V+ D
Sbjct: 679 EKELLQINSKLKEELEESQQTIDGIEI-----EAEQQYTELTSE--IDELCEIVQRKDQE 731
Query: 418 LFVLERYMEDLNSRYVNIFKDYSKDTGEKDIVLQKIKEDIKNLIDHQDVIAKDASDL 474
L +L+ + ++ +NI D + +++Q+ KE I+NL + D I K ++
Sbjct: 732 LAILKEKVTNV----INIENSLKDDVDSQKVIVQRQKEIIENLREELDAITKKLGEV 784
>YAN9_SCHPO (Q10074) Hypothetical protein C3H1.09c in chromosome I
Length = 656
Score = 31.6 bits (70), Expect = 4.9
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 149 KSRAISSKVKSGTGQSRSVIHRLEPGGAEYNYASASKGAKVLGSNKEGKGASNILSRDKD 208
+SR+ S+KV RSV + GG ++ + + SN G N L+R+
Sbjct: 155 RSRSFSAKVSDPNLHLRSVQDMKQAGGMRRDFLRNRASSISMSSNAHGN--PNFLNRNFI 212
Query: 209 KYLRNPCSVVGKFVIMELSEE 229
++L SV G F ELSEE
Sbjct: 213 EFL----SVYGHFAGEELSEE 229
>KPRS_SULTO (Q973F3) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)
(RPPK) (Phosphoribosyl pyrophosphate synthetase)
(P-Rib-PP synthetase) (PRPP synthetase)
Length = 291
Score = 31.6 bits (70), Expect = 4.9
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 31/149 (20%)
Query: 329 QDNLLASGEGNADKTIL-----PHPDPAVIEHVHKKPLEGINSVPASDISSSKHETANIK 383
QD GE + KTIL D ++ HK+ ++S E +K
Sbjct: 94 QDRRFKEGEALSIKTILNAIARAGADVLIVIEPHKE----------EELSYFGKE---VK 140
Query: 384 VPDPVEEIRQQVGRMPGDTVLKILMQKVRTLDVNLFVLER---YMEDLNSRYVNIFKDYS 440
+ DP+ E+ ++V + ++K L + LER E LN+ Y I K+
Sbjct: 141 IADPMPELAKEVSKK---------VEKPFVLAPDRGALERAKRLAEQLNAEYSYIEKERD 191
Query: 441 KDTGEKDIV-LQKIKEDIKNLIDHQDVIA 468
+DTGE I L +++ K++I D+I+
Sbjct: 192 RDTGEVRIKNLPELRLSGKDVIIVDDIIS 220
>ANT1_ONCVO (P21249) Major antigen
Length = 2022
Score = 31.6 bits (70), Expect = 4.9
Identities = 14/73 (19%), Positives = 38/73 (51%)
Query: 397 RMPGDTVLKILMQKVRTLDVNLFVLERYMEDLNSRYVNIFKDYSKDTGEKDIVLQKIKED 456
+ GDT L +L +K+R +++ +++ ++L D ++T ++ ++++E
Sbjct: 763 KQKGDTELNLLTEKIRKVEIEFERIKKDNQELEDHERTARDDLKQETNRNHLLAKELEEA 822
Query: 457 IKNLIDHQDVIAK 469
+++ D +AK
Sbjct: 823 RADIVALNDRLAK 835
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,055,752
Number of Sequences: 164201
Number of extensions: 2616929
Number of successful extensions: 5960
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 5943
Number of HSP's gapped (non-prelim): 41
length of query: 496
length of database: 59,974,054
effective HSP length: 114
effective length of query: 382
effective length of database: 41,255,140
effective search space: 15759463480
effective search space used: 15759463480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148651.5