Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148651.11 - phase: 0 
         (395 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein                       34  0.57
A10D_MOUSE (Q8K2X1) Potential phospholipid-transporting ATPase V...    33  1.7
APG1_YEAST (P53104) Autophagy serine/threonine-protein kinase AP...    32  3.7
A10D_MACFA (Q9GKS6) Potential phospholipid-transporting ATPase V...    32  3.7
A10D_HUMAN (Q9P241) Potential phospholipid-transporting ATPase V...    32  3.7
FX11_RAT (Q7TSL3) F-box only protein 11                                31  6.3
FX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated p...    31  6.3
YJO9_YEAST (P47005) F-box protein YJL149w                              30  8.2

>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein
          Length = 442

 Score = 34.3 bits (77), Expect = 0.57
 Identities = 18/71 (25%), Positives = 34/71 (47%)

Query: 1   MEDRHQSVLPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDPHFIQMHLKNSARNPNLM 60
           M+ R  S LP  L+ ++++ LP     R RCV K + +L+    F++ +L+      N  
Sbjct: 42  MDGRIWSKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNCF 101

Query: 61  VIARQHNFNSF 71
           +  +     S+
Sbjct: 102 LFFKHKTLKSY 112


>A10D_MOUSE (Q8K2X1) Potential phospholipid-transporting ATPase VD (EC
            3.6.3.1) (ATPVD)
          Length = 1416

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 15/38 (39%), Positives = 25/38 (65%)

Query: 225  ALQDYFGLDYFHLNYSSITPEKYVILSLDLSTETYTQL 262
            ++ DY+ L +F+L ++S+ P  Y +L  D+S ET  QL
Sbjct: 1138 SMTDYWVLIFFNLLFTSVPPIIYGVLEKDVSAETLLQL 1175


>APG1_YEAST (P53104) Autophagy serine/threonine-protein kinase APG1
           (EC 2.7.1.37)
          Length = 897

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 33  NKFYNTLISDPHFIQMHLKNSARNPNLMVIARQHNFNSFDENVLNLPISLLLENSLSTVP 92
           NK++N+L+SD  F + ++    ++  +  +A +     F+ N +  P S   +N L    
Sbjct: 413 NKYHNSLVSDRSFEREYVVVEKKSVEVNSLADEVAQAGFNPNPIKHPTSTQNQNVLLNEQ 472

Query: 93  YDP----YYRLKNENP 104
           + P    Y++ + ENP
Sbjct: 473 FSPNNQQYFQNQGENP 488


>A10D_MACFA (Q9GKS6) Potential phospholipid-transporting ATPase VD
           (EC 3.6.3.1) (QnpA-21212) (Fragment)
          Length = 653

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 15/38 (39%), Positives = 24/38 (62%)

Query: 225 ALQDYFGLDYFHLNYSSITPEKYVILSLDLSTETYTQL 262
           ++ DY+ L +F+L ++S  P  Y +L  D+S ET  QL
Sbjct: 404 SMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQL 441


>A10D_HUMAN (Q9P241) Potential phospholipid-transporting ATPase VD (EC
            3.6.3.1) (ATPVD)
          Length = 1426

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 15/38 (39%), Positives = 24/38 (62%)

Query: 225  ALQDYFGLDYFHLNYSSITPEKYVILSLDLSTETYTQL 262
            ++ DY+ L +F+L ++S  P  Y +L  D+S ET  QL
Sbjct: 1141 SMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQL 1178


>FX11_RAT (Q7TSL3) F-box only protein 11
          Length = 843

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 6   QSVLPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDP 43
           Q  LP E++ KI S L  + L R  CV K ++ L +DP
Sbjct: 72  QEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDP 109


>FX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated
           protein VIT-1)
          Length = 843

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 6   QSVLPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDP 43
           Q  LP E++ KI S L  + L R  CV K ++ L +DP
Sbjct: 72  QEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDP 109


>YJO9_YEAST (P47005) F-box protein YJL149w
          Length = 663

 Score = 30.4 bits (67), Expect = 8.2
 Identities = 23/79 (29%), Positives = 38/79 (47%), Gaps = 6/79 (7%)

Query: 9   LPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDPHFIQMHLKNSARNPNLMVIARQHNF 68
           LP ELM ++ S LP    ++   VNK  N + +   + +++L +S       V+      
Sbjct: 52  LPDELMQEVFSHLPQPDRLQLCLVNKRLNKIATKLLYRRIYLNDS------NVVKSDFMH 105

Query: 69  NSFDENVLNLPISLLLENS 87
            + +  +LNLP SL  E S
Sbjct: 106 LAINWTLLNLPSSLKEEES 124


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.325    0.139    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,016,753
Number of Sequences: 164201
Number of extensions: 1995542
Number of successful extensions: 5712
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5704
Number of HSP's gapped (non-prelim): 10
length of query: 395
length of database: 59,974,054
effective HSP length: 112
effective length of query: 283
effective length of database: 41,583,542
effective search space: 11768142386
effective search space used: 11768142386
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)


Medicago: description of AC148651.11