
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148651.11 - phase: 0
(395 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein 34 0.57
A10D_MOUSE (Q8K2X1) Potential phospholipid-transporting ATPase V... 33 1.7
APG1_YEAST (P53104) Autophagy serine/threonine-protein kinase AP... 32 3.7
A10D_MACFA (Q9GKS6) Potential phospholipid-transporting ATPase V... 32 3.7
A10D_HUMAN (Q9P241) Potential phospholipid-transporting ATPase V... 32 3.7
FX11_RAT (Q7TSL3) F-box only protein 11 31 6.3
FX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated p... 31 6.3
YJO9_YEAST (P47005) F-box protein YJL149w 30 8.2
>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein
Length = 442
Score = 34.3 bits (77), Expect = 0.57
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 1 MEDRHQSVLPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDPHFIQMHLKNSARNPNLM 60
M+ R S LP L+ ++++ LP R RCV K + +L+ F++ +L+ N
Sbjct: 42 MDGRIWSKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNCF 101
Query: 61 VIARQHNFNSF 71
+ + S+
Sbjct: 102 LFFKHKTLKSY 112
>A10D_MOUSE (Q8K2X1) Potential phospholipid-transporting ATPase VD (EC
3.6.3.1) (ATPVD)
Length = 1416
Score = 32.7 bits (73), Expect = 1.7
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 225 ALQDYFGLDYFHLNYSSITPEKYVILSLDLSTETYTQL 262
++ DY+ L +F+L ++S+ P Y +L D+S ET QL
Sbjct: 1138 SMTDYWVLIFFNLLFTSVPPIIYGVLEKDVSAETLLQL 1175
>APG1_YEAST (P53104) Autophagy serine/threonine-protein kinase APG1
(EC 2.7.1.37)
Length = 897
Score = 31.6 bits (70), Expect = 3.7
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 33 NKFYNTLISDPHFIQMHLKNSARNPNLMVIARQHNFNSFDENVLNLPISLLLENSLSTVP 92
NK++N+L+SD F + ++ ++ + +A + F+ N + P S +N L
Sbjct: 413 NKYHNSLVSDRSFEREYVVVEKKSVEVNSLADEVAQAGFNPNPIKHPTSTQNQNVLLNEQ 472
Query: 93 YDP----YYRLKNENP 104
+ P Y++ + ENP
Sbjct: 473 FSPNNQQYFQNQGENP 488
>A10D_MACFA (Q9GKS6) Potential phospholipid-transporting ATPase VD
(EC 3.6.3.1) (QnpA-21212) (Fragment)
Length = 653
Score = 31.6 bits (70), Expect = 3.7
Identities = 15/38 (39%), Positives = 24/38 (62%)
Query: 225 ALQDYFGLDYFHLNYSSITPEKYVILSLDLSTETYTQL 262
++ DY+ L +F+L ++S P Y +L D+S ET QL
Sbjct: 404 SMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQL 441
>A10D_HUMAN (Q9P241) Potential phospholipid-transporting ATPase VD (EC
3.6.3.1) (ATPVD)
Length = 1426
Score = 31.6 bits (70), Expect = 3.7
Identities = 15/38 (39%), Positives = 24/38 (62%)
Query: 225 ALQDYFGLDYFHLNYSSITPEKYVILSLDLSTETYTQL 262
++ DY+ L +F+L ++S P Y +L D+S ET QL
Sbjct: 1141 SMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQL 1178
>FX11_RAT (Q7TSL3) F-box only protein 11
Length = 843
Score = 30.8 bits (68), Expect = 6.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 6 QSVLPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDP 43
Q LP E++ KI S L + L R CV K ++ L +DP
Sbjct: 72 QEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDP 109
>FX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated
protein VIT-1)
Length = 843
Score = 30.8 bits (68), Expect = 6.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 6 QSVLPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDP 43
Q LP E++ KI S L + L R CV K ++ L +DP
Sbjct: 72 QEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDP 109
>YJO9_YEAST (P47005) F-box protein YJL149w
Length = 663
Score = 30.4 bits (67), Expect = 8.2
Identities = 23/79 (29%), Positives = 38/79 (47%), Gaps = 6/79 (7%)
Query: 9 LPSELMTKILSLLPVKPLMRFRCVNKFYNTLISDPHFIQMHLKNSARNPNLMVIARQHNF 68
LP ELM ++ S LP ++ VNK N + + + +++L +S V+
Sbjct: 52 LPDELMQEVFSHLPQPDRLQLCLVNKRLNKIATKLLYRRIYLNDS------NVVKSDFMH 105
Query: 69 NSFDENVLNLPISLLLENS 87
+ + +LNLP SL E S
Sbjct: 106 LAINWTLLNLPSSLKEEES 124
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.325 0.139 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,016,753
Number of Sequences: 164201
Number of extensions: 1995542
Number of successful extensions: 5712
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5704
Number of HSP's gapped (non-prelim): 10
length of query: 395
length of database: 59,974,054
effective HSP length: 112
effective length of query: 283
effective length of database: 41,583,542
effective search space: 11768142386
effective search space used: 11768142386
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148651.11