Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148607.14 - phase: 0 
         (359 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SUF_DROME (P25991) Suppressor of forked protein                        38  0.035
HEX_ADEG1 (P42671) Hexon protein (Late protein 2)                      36  0.13
CWF4_SCHPO (P87312) Cell cycle control protein cwf4                    36  0.13
CWF3_SCHPO (Q9P7R9) Cell cycle control protein cwf3                    35  0.38
PRP1_SCHPO (Q12381) Pre-mRNA splicing factor prp1                      32  2.5
CY1_EUGGR (P20114) Cytochrome c1, heme protein                         32  2.5
OTU_DROME (P10383) Ovarian tumor locus protein                         31  4.2
TIPD_DICDI (O15736) Protein tipD                                       31  5.5
OGT_CAEEL (O18158) UDP-N-acetylglucosamine--peptide N-acetylgluc...    31  5.5
GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10...    31  5.5
BCSC_SALTY (Q8ZLB8) Cellulose synthase operon protein C                31  5.5
A85B_MYCTU (P31952) Antigen 85-B precursor (85B) (Extracellular ...    31  5.5
A85B_MYCBO (P12942) Antigen 85-B precursor (85B) (Extracellular ...    31  5.5
ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ...    30  7.2
CRN1_HUMAN (Q9BZJ0) Crooked neck-like protein 1 (Crooked neck ho...    30  7.2
HRPA_HAEIN (P45018) ATP-dependent helicase hrpA homolog                30  9.4
CTFX_MOUSE (Q9D5U8) Protein C20orf152 homolog                          30  9.4

>SUF_DROME (P25991) Suppressor of forked protein
          Length = 733

 Score = 38.1 bits (87), Expect = 0.035
 Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 48/257 (18%)

Query: 19  ERCVIACANYPEYWIRYVLCMEASESM--------------DLANNVLARASQVFVKRQP 64
           E+C++   ++P  W +    ++ S  +              D   N+L R+    + R  
Sbjct: 282 EQCLLVLTHHPAVWHQASQFLDTSARVLTEKGDVQAAKIFADECANILERSINGVLNRNA 341

Query: 65  EIHLFCARFKEQAGDIVGARAAYQLVHT---------EISPGLLEAIIRHANMEHRLGKL 115
            ++   A F+E        R  Y+ VHT         +I P L+   +++     R   +
Sbjct: 342 LLYFAYADFEE-------GRLKYEKVHTMYNKLLQLPDIDPTLV--YVQYMKFARRAEGI 392

Query: 116 EDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNSEKAREILVGGLENASLSKP 175
           + A S++++A    + + H      +F   +   Y  S + E A  I   GL+    S  
Sbjct: 393 KSARSIFKKAREDVRSRYH------IFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPE 446

Query: 176 LLEALLHFEAIQPQPKRVDIDFLESLVVKFITPNPENPGVASATEREELSNIFLEFLNLF 235
            +   + + +   +     + F   L          + G  S  +  E+ N FLEF +  
Sbjct: 447 YVMCYIDYLSHLNEDNNTRVLFERVL----------SSGGLSPHKSVEVWNRFLEFESNI 496

Query: 236 GDVQSIKRAEDRHAKLF 252
           GD+ SI + E R + +F
Sbjct: 497 GDLSSIVKVERRRSAVF 513


>HEX_ADEG1 (P42671) Hexon protein (Late protein 2)
          Length = 942

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 283 AQSPAQSVAGAYPNGPNQWPNYG-VQPQTWPATTQAQGQQWPAGYTQQQVNWFFP 336
           + +P  +  G+ P+  N   N G + P++WP  T  QG+ WPA       NW +P
Sbjct: 790 SSTPVVNDTGSQPSQDNVRNNSGFIAPRSWPVWTAQQGEAWPA-------NWPYP 837


>CWF4_SCHPO (P87312) Cell cycle control protein cwf4
          Length = 674

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 40/183 (21%), Positives = 81/183 (43%), Gaps = 22/183 (12%)

Query: 17  LYERCVIACANYPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFCARF--- 73
           ++ER +   + Y   W++Y+ C   + +++ A N+  RA    V + P +     ++   
Sbjct: 92  VFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRA----VTQLPRVDKLWYKYVYM 147

Query: 74  KEQAGDIVGARAAYQ-LVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGK 132
           +E  G+I G R  ++  +  E       + IR   ME R  + E A  +YE+ + +    
Sbjct: 148 EEMLGNITGCRQVFERWLKWEPDENCWMSYIR---MERRYHENERARGIYERFVVV---- 200

Query: 133 EHSQTLPMLFAQYSRFVYLASGNSEKAREILVGGLE---NASLSKPLLEALLHFEAIQPQ 189
            H +    L  +++RF     GN+   R++ +  ++      L++    A   FE  Q +
Sbjct: 201 -HPEVTNWL--RWARFEE-ECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKE 256

Query: 190 PKR 192
            +R
Sbjct: 257 YER 259


>CWF3_SCHPO (Q9P7R9) Cell cycle control protein cwf3
          Length = 790

 Score = 34.7 bits (78), Expect = 0.38
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 16/158 (10%)

Query: 57  QVFVKRQPEIHLFCARFKEQAGDIVGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLE 116
           QV + +  +I ++    +E  G I   R  Y  V  E+     + ++ +AN+       E
Sbjct: 473 QVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRVF-ELKIATPQVVVNYANLLEENAYFE 531

Query: 117 DAFSLYEQAIAIEKGKEHSQTLPMLFAQY----SRFVYLASG-NSEKAREILVGGLENA- 170
           D+F +YE+ +A+        + P+ F  +    ++FV    G + E+ R++    LE   
Sbjct: 532 DSFKIYERGVAL-------FSYPVAFELWNLYLTKFVKRYQGTHMERTRDLFEQALEGCP 584

Query: 171 -SLSKPLLEALLHFEAIQPQPKRVDIDFLESLVVKFIT 207
              SK +      FE    + KR  I  LE    K  T
Sbjct: 585 PEFSKSIYLLYADFEEKFGKAKR-SISILEKAADKVKT 621


>PRP1_SCHPO (Q12381) Pre-mRNA splicing factor prp1
          Length = 906

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 10/176 (5%)

Query: 12  DQIVKLYERCVIACANYPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFCA 71
           + +  + E+ V +C      W+ Y    +    +  A N+L RA + +     EI L   
Sbjct: 561 ESVCSILEKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFE-YNSNSEEIWLAAV 619

Query: 72  RFKEQAGDIVGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKG 131
           R +    +    RA   L    I  G      +  ++E  L + + A  L E A+ I   
Sbjct: 620 RIEFVNNE--NERARKLLARARIESGTERIWTKSISLERILDEKDRALQLLENALKI--- 674

Query: 132 KEHSQTLPMLFAQYSRFVYLASGNSEKAREILVGGLENASLSKPLLEALLHFEAIQ 187
             H   L M+  Q    ++      E AR+  + G +    S PL   L   E  Q
Sbjct: 675 YPHYDKLYMMKGQ----IFEDKEQIELARDAYLAGTKVCPYSIPLWLLLAKLEEKQ 726


>CY1_EUGGR (P20114) Cytochrome c1, heme protein
          Length = 243

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 13/40 (32%), Positives = 26/40 (64%)

Query: 237 DVQSIKRAEDRHAKLFLPNRGLSELKKRHAEDFLASDKTK 276
           D +S++R ++ + ++F P   LS +K RH E F++ ++ K
Sbjct: 21  DWRSVRRGKEVYEQVFAPCHSLSFIKYRHFEAFMSKEEVK 60


>OTU_DROME (P10383) Ovarian tumor locus protein
          Length = 853

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 20/61 (32%), Positives = 29/61 (46%), Gaps = 11/61 (18%)

Query: 274 KTKVSRAY---SAQSPAQSVAGAYPNGPNQWPNY--------GVQPQTWPATTQAQGQQW 322
           +TK SR     S+ S  Q V+G+    P Q+ NY        G  P  WPA+  A  +++
Sbjct: 495 RTKASRVQPQNSSSSQNQEVSGSAAPPPTQYMNYVPMIPSRPGHLPPPWPASPMAIAEEF 554

Query: 323 P 323
           P
Sbjct: 555 P 555


>TIPD_DICDI (O15736) Protein tipD
          Length = 612

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 28/115 (24%), Positives = 52/115 (44%), Gaps = 6/115 (5%)

Query: 155 NSEKAREILVGGLENASLSKPLLEALLHFEAIQPQPKRVDIDFLESLVVKFITPNPENPG 214
           N++ A  IL+   +N  L   L+   +  E I+   ++ D+D ++ L  + +    EN  
Sbjct: 151 NADNASSILLLNDKNKDLQNELMSKEIEIERIRSTIQQ-DLDSIKRL--EMVVIEKEN-- 205

Query: 215 VASATEREELSNIFLEFLNLFGDVQSIKRAEDRHAKLFLPNRGLSELKKRHAEDF 269
             S   R+ELS++  EFL+    V  +++      + +L  +     K   A DF
Sbjct: 206 -VSQIIRDELSSLQTEFLHNESKVVKLEQENSSLVERWLRKKNEEASKMNEANDF 259


>OGT_CAEEL (O18158) UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc)
           (OGT)
          Length = 1151

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 24/83 (28%), Positives = 38/83 (44%), Gaps = 3/83 (3%)

Query: 64  PEIHLFCARFKEQAGDIVGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYE 123
           P+ +   A   ++ G +V A   Y     E+ P   ++    AN++   GK+EDA  LY 
Sbjct: 397 PDAYCNLANALKEKGSVVEAEQMYMKA-LELCPTHADSQNNLANIKREQGKIEDATRLYL 455

Query: 124 QAIAI--EKGKEHSQTLPMLFAQ 144
           +A+ I  E    HS    +L  Q
Sbjct: 456 KALEIYPEFAAAHSNLASILQQQ 478


>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10
           precursor
          Length = 648

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 16/45 (35%), Positives = 19/45 (41%), Gaps = 1/45 (2%)

Query: 284 QSPAQSVAGAYPNGPNQWPNYGVQPQTWPATTQAQGQQWPAGYTQ 328
           Q P Q   G YP  P Q    G QP+ W  + Q Q   +P    Q
Sbjct: 228 QQPGQWQQGYYPTSPQQL-GQGQQPRQWQQSGQGQQGHYPTSLQQ 271


>BCSC_SALTY (Q8ZLB8) Cellulose synthase operon protein C
          Length = 1143

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 47/227 (20%), Positives = 94/227 (40%), Gaps = 23/227 (10%)

Query: 39  MEASESMDLANNVL----ARASQVFVKRQP---EIHLFCARFKEQAGDIVGARAAYQLVH 91
           +++++ ++ AN +      R ++  +++QP    I L  A + +Q GD   ARAAY  V 
Sbjct: 557 LQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLADWAQQRGDNAAARAAYDAVL 616

Query: 92  TEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYL 151
               PG ++A++    ++   G   D  +   Q  A+      SQ   +   +      L
Sbjct: 617 AR-EPGNVDAMLGRVEIDIAQG---DNAAARAQLAALPA----SQITSINMQRRVALAQL 668

Query: 152 ASGNSEKAREILVGGLENASLSKPLLEALL------HFEAIQPQPKRVDIDFLESLVVKF 205
             G+   A          A    P +E+ +       F+A   +P+R    + +++V   
Sbjct: 669 QLGDITAAARTFNRITPQAKAQPPSMESAMVLRDAAAFQAQTGEPQRALETYKDAMVAAA 728

Query: 206 ITP-NPENPGVASATEREELSNIFLEFLNLFGDVQSIKRAEDRHAKL 251
           ITP  P++    +   R +  + +L+   +  D   + R +D +  L
Sbjct: 729 ITPVRPQDNDTFTRLTRNDEKDDWLK-RGVRSDAAELYRQQDLNVTL 774


>A85B_MYCTU (P31952) Antigen 85-B precursor (85B) (Extracellular
           alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl
           transferase 85B) (EC 2.3.1.-) (Fibronectin-binding
           protein B) (30 kDa extracellular protein)
          Length = 325

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 17/55 (30%), Positives = 25/55 (44%), Gaps = 1/55 (1%)

Query: 254 PNR-GLSELKKRHAEDFLASDKTKVSRAYSAQSPAQSVAGAYPNGPNQWPNYGVQ 307
           PN  G + +     E+F+ S   K   AY+A     +V    PNG + W  +G Q
Sbjct: 256 PNELGGANIPAEFLENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHSWEYWGAQ 310


>A85B_MYCBO (P12942) Antigen 85-B precursor (85B) (Extracellular
           alpha-antigen) (Antigen 85 complex B) (Ag85B) (Mycolyl
           transferase 85B) (EC 2.3.1.-) (Fibronectin-binding
           protein B)
          Length = 325

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 17/55 (30%), Positives = 25/55 (44%), Gaps = 1/55 (1%)

Query: 254 PNR-GLSELKKRHAEDFLASDKTKVSRAYSAQSPAQSVAGAYPNGPNQWPNYGVQ 307
           PN  G + +     E+F+ S   K   AY+A     +V    PNG + W  +G Q
Sbjct: 256 PNELGGANIPAEFLENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHSWEYWGAQ 310


>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B
           (hnRNP A/B) (APOBEC-1 binding protein 1) (ABBP-1)
          Length = 331

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 49/227 (21%), Positives = 84/227 (36%), Gaps = 51/227 (22%)

Query: 152 ASGNSEKAREILVGGLENASLSKPLLEALLHFEAIQPQPKRVD-----------IDFLES 200
           AS N E A ++ VGGL   +  K L +    F  +     ++D           I F ++
Sbjct: 60  ASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA 119

Query: 201 LVVKFITPNPE--------NPGVASATEREELSNIFL--------------EFLNLFGDV 238
             V+ +    E        +P  A A +++ +  IF+              E+   FG++
Sbjct: 120 ASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEI 179

Query: 239 QSIKRAED-----RHAKLFLPNRGLSELKKRHAEDF--LASDKTKVSRAYSAQSPAQSVA 291
           ++I+   D     R   +F+  +    +KK   + F  ++  K ++  A   +   Q   
Sbjct: 180 EAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQY 239

Query: 292 GAYPNGPNQWPNYGV--------QPQTWPATTQAQGQQWPAGYTQQQ 330
           G+   G     N G         Q Q+W    Q  G  W  GY  QQ
Sbjct: 240 GSGGRGNRNRGNRGSGGGGGGGGQSQSW---NQGYGNYWNQGYGYQQ 283


>CRN1_HUMAN (Q9BZJ0) Crooked neck-like protein 1 (Crooked neck
           homolog) (hCrn) (CGI-201) (MSTP021)
          Length = 848

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 24/87 (27%), Positives = 36/87 (40%), Gaps = 3/87 (3%)

Query: 11  VDQIVKLYERCVIACANYPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFC 70
           VD+   +YER V+   +    WI+Y    E       A  V  RA + F     + HL+ 
Sbjct: 359 VDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYV 417

Query: 71  --ARFKEQAGDIVGARAAYQLVHTEIS 95
             A+F+E   +    R  Y+     IS
Sbjct: 418 AFAKFEENQKEFERVRVIYKYALDRIS 444



 Score = 30.0 bits (66), Expect = 9.4
 Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 14/140 (10%)

Query: 11  VDQIVKLYERCVIACANYPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFC 70
           V+    +++R +       ++W +Y    E   ++  A  V  R    +++ QPE   + 
Sbjct: 292 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFER----WMEWQPEEQAWH 347

Query: 71  A--RFKEQAGDIVGARAAYQ---LVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQA 125
           +   F+ +  ++  AR  Y+   LVH ++        I++A  E +      A  +YE+A
Sbjct: 348 SYINFELRYKEVDRARTIYERFVLVHPDVKNW-----IKYARFEEKHAYFAHARKVYERA 402

Query: 126 IAIEKGKEHSQTLPMLFAQY 145
           +     +   + L + FA++
Sbjct: 403 VEFFGDEHMDEHLYVAFAKF 422


>HRPA_HAEIN (P45018) ATP-dependent helicase hrpA homolog
          Length = 1304

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 74  KEQAGDIVGARAAYQLVHTEISPGLLEAI-IRHANMEHRLGKLEDAFSLYEQAIAIEK 130
           +E +  I   +A YQ +HT +  GLL  I ++ A  +  LG     F+++  ++  +K
Sbjct: 612 REMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKK 669


>CTFX_MOUSE (Q9D5U8) Protein C20orf152 homolog
          Length = 556

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 221 REELSNIFLEFLNL--FGDVQSIKRAEDRHAKLFLPNRGLSELKKRHAEDFLASDK---- 274
           R++L  + +E LN   F  VQ+ K+    H  LFL    L +  K+H   FLA  K    
Sbjct: 469 RKDLLRLLVEPLNKSPFIPVQTKKKEIYNHKSLFLDLCSLEKKVKQHYPIFLAPQKYLPP 528

Query: 275 TKVSRAYSAQSPAQSVAGAYPNGPNQWPNYGV 306
            +V +A SA  P Q +    P    Q+ N GV
Sbjct: 529 LRVVQAISA--PRQKIQELLP----QYKNAGV 554


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.321    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,831,440
Number of Sequences: 164201
Number of extensions: 1660984
Number of successful extensions: 4127
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4119
Number of HSP's gapped (non-prelim): 21
length of query: 359
length of database: 59,974,054
effective HSP length: 111
effective length of query: 248
effective length of database: 41,747,743
effective search space: 10353440264
effective search space used: 10353440264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)


Medicago: description of AC148607.14