BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148607.13 + phase: 0
(679 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TRA1_MAIZE (P08770) Putative AC transposase (ORFA) 356 1e-97
TRA9_MAIZE (P03010) Putative AC9 transposase 339 1e-92
HOBO_DROME (P12258) Transposable element Hobo transposase 69 4e-11
ZBE4_HUMAN (O75132) Zinc finger BED domain containing protein 4 67 2e-10
ZBE1_HUMAN (O96006) Zinc finger BED domain containing protein 1 ... 65 6e-10
YLZ5_CAEEL (P34418) Hypothetical protein F42H10.5 in chromosome III 41 0.012
RPSD_BACSU (P10726) RNA polymerase sigma-D factor (Sigma-28) 37 0.22
SYA_WIGBR (Q8D2W8) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 35 0.85
YUY1_CAEEL (P54073) Hypothetical protein F44G4.1 in chromosome II 34 1.1
YYAN_BACSU (P37510) Putative HTH-type transcriptional regulator ... 33 2.5
VGLM_BUNL7 (P09612) M polyprotein precursor [Contains: Glycoprot... 32 4.2
UBP4_MOUSE (P35123) Ubiquitin carboxyl-terminal hydrolase 4 (EC ... 32 4.2
UBP4_HUMAN (Q13107) Ubiquitin carboxyl-terminal hydrolase 4 (EC ... 32 4.2
GAAB_PICTO (Q6L1Q1) GMP synthase [glutamine-hydrolyzing] subunit... 32 4.2
ORN_ARATH (Q9ZVE0) Probable oligoribonuclease (EC 3.1.-.-) 32 5.5
HTPG_BUCAI (P57555) Chaperone protein htpG (Heat shock protein h... 32 5.5
KF1A_MOUSE (P33173) Kinesin-like protein KIF1A (Axonal transport... 32 7.2
KF1A_HUMAN (Q12756) Kinesin-like protein KIF1A (Axonal transport... 32 7.2
UL49_HHV7J (P52442) Protein U33 31 9.4
SYA_MYCMS (P61704) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 31 9.4
>TRA1_MAIZE (P08770) Putative AC transposase (ORFA)
Length = 806
Score = 356 bits (914), Expect = 1e-97
Identities = 211/628 (33%), Positives = 342/628 (53%), Gaps = 32/628 (5%)
Query: 51 KSQGKALTSDVWLYLVKVGI---VDGVE------KCRCKACHKLLTCESGSGTSHLKRHV 101
+ + K TSDVW + K I VDG + C C E GTS + H+
Sbjct: 132 QKRAKKCTSDVWQHFTKKEIEVEVDGKKYVQVWGHCNFPNCKAKYRAEGHHGTSGFRNHL 191
Query: 102 RSCSKTIKNHDVGEMMIDVE---GK----LRKKKFDPMANREFLARIMITHGAPFNMVEW 154
R+ +K G++ + E GK + K+D + + + L +I H PFN+VE
Sbjct: 192 RTSHSLVK----GQLCLKSEKDHGKDINLIEPYKYDEVVSLKKLHLAIIMHEYPFNIVEH 247
Query: 155 KVFREYQKFLNDDCVFVSRNTIAKEILNVYRDEKQKLKSQLAQIRGRVCLTSDCWTACSN 214
+ F E+ K L SR T K I+++Y +EK+KL +L ++ R T D WT+C N
Sbjct: 248 EYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQN 307
Query: 215 EGYISLTAHYVNVNWKLESKILAFAHMEPPHSGRDLALKVLEMLDDWGIEKKIFSITLDN 274
+ Y+ +T H+++ +W L+ +I+ F H+E H+G+ L+ ++ W IEKK+F+++LDN
Sbjct: 308 KSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDN 367
Query: 275 ASANNSMANFLKEHL-GLSNSLLLDGEFFHIRCSAHILNLIVQDGLKVVSDALHKIRQSV 333
ASAN + + E L ++L+ DG FFH+RC+ HILNL+ +DGL V++ + KI+
Sbjct: 368 ASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIK--- 424
Query: 334 AYVRVTESRTLLFSECVRIVG--DIDTTIGLRLDCVTRWNSTFIMLQSALVYRRAFYSLS 391
A V +S L + E ++ D+D + G+ D TRWNST++ML+ AL Y+ A L
Sbjct: 425 AIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLK 484
Query: 392 LRDSN--FKCCPTSEEWRRAEIMCEILKPFFTITNLISGSSYPTSNLYFGEIWKIECLIR 449
D CP +EEW+ A + + LK FF +T L+SG+ Y T+NL++ +I+ LI
Sbjct: 485 TSDPRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLID 544
Query: 450 SYLTSEDLLIQKMAENMKVKFDKYWSDYNVVLAVGAVLDPTKKFNFLKFAYEKLDPLTSE 509
+ E +I++MA M KF+KYW N+ LAV LDP K ++F +K + +
Sbjct: 545 QWCVHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYK 604
Query: 510 EKLKKVKMTLGKLFSEYIKNGIPSNLSSSQVQPSYGGGTRITSSSYDEFEEY--ESQSSN 567
+ + KL+ Y + + ++ + + + DEF+ Y E + +
Sbjct: 605 VHVDDFVRVIRKLYQFY--SSCSPSAPKTKTTTNDSMDDTLMENEDDEFQNYLHELKDYD 662
Query: 568 STGKSELDTYLDELRMPLSQEFDVLAFWKERSRRSPNLARMACDILSIPITTVASESAFS 627
+ELD Y+ E + S +FD+L++W+ R P L ++A D+L+I ++TVASESAFS
Sbjct: 663 QVESNELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFS 722
Query: 628 IGARVVNRYRSSMKDDSVQALLCARSWL 655
G RVV+ YR+ + + V+AL+C + W+
Sbjct: 723 AGGRVVDPYRNRLGSEIVEALICTKDWV 750
>TRA9_MAIZE (P03010) Putative AC9 transposase
Length = 839
Score = 339 bits (870), Expect = 1e-92
Identities = 211/654 (32%), Positives = 338/654 (51%), Gaps = 60/654 (9%)
Query: 51 KSQGKALTSDVWLYLVKVGI---VDGVE------KCRCKACHKLLTCESGSGTSHLKRHV 101
+ + K TSDVW + K I VDG + C C E GTS + H+
Sbjct: 78 QKRAKKCTSDVWQHFTKKEIEVEVDGKKYVQVWGHCNFPNCKAKYRAEGHHGTSGFRNHL 137
Query: 102 RSCSKTIKNHDVGEMMIDVE---GK----LRKKKFDPMANREFLARIMITHGAPFNMVEW 154
R+ +K G++ + E GK + K+D + + + L +I H PFN+VE
Sbjct: 138 RTSHSLVK----GQLCLKSEKDHGKDINLIEPYKYDEVVSLKKLHLAIIMHEYPFNIVEH 193
Query: 155 KVFREYQKFLNDDCVFVSRNTIAKEILNVYRDEKQKLKSQLAQIRGRVCLTSDCWTACSN 214
+ F E+ K L SR T K I+++Y +EK+KL +L ++ R T D WT+C N
Sbjct: 194 EYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQN 253
Query: 215 EGYISLTAHYVNVNWKLESKILAFAHMEPPHSGRDLALKVLEMLDDWGIEKKIFSITLDN 274
+ Y+ +T H+++ +W L+ +I+ F H+E H+G+ L+ ++ W IEKK+F+++LDN
Sbjct: 254 KSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDN 313
Query: 275 ASANNSMANFLKEHL-GLSNSLLLDGEFFHIRCSAHILNLIVQDGLKVVSDALHKIRQSV 333
ASAN + + E L ++L+ DG FFH+RC+ HILNL+ +DGL V++ + KI+
Sbjct: 314 ASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIK--- 370
Query: 334 AYVRVTESRTLLFSECVRIVG--DIDTTIGLRLDCVTRWNSTFIMLQSALVYRRAFYSLS 391
A V +S L + E ++ D+D + G+ D TRWNST++ML+ AL Y+ A L
Sbjct: 371 AIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLK 430
Query: 392 LRDSN----FKCC------------------------PTSEEWRRAEIMCEILKPFFTIT 423
D CC P S W C LK FF +T
Sbjct: 431 TSDPRRYVCLNCCTCHHYKFSINQMSIIVGTMQFVLKPRSGRWHLTLFKC--LKKFFDLT 488
Query: 424 NLISGSSYPTSNLYFGEIWKIECLIRSYLTSEDLLIQKMAENMKVKFDKYWSDYNVVLAV 483
L+SG+ Y T+NL++ +I+ LI + E +I++MA M KF+KYW N+ LAV
Sbjct: 489 ELLSGTQYSTANLFYKGFCEIKDLIDQWCCHEKFVIRRMAVAMSEKFEKYWKVSNIALAV 548
Query: 484 GAVLDPTKKFNFLKFAYEKLDPLTSEEKLKKVKMTLGKLFSEYIKNGIPSNLSSSQVQPS 543
LDP K ++F +K + + + + KL+ Y + + ++ +
Sbjct: 549 ACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQFY--SSCSPSAPKTKTTTN 606
Query: 544 YGGGTRITSSSYDEFEEY--ESQSSNSTGKSELDTYLDELRMPLSQEFDVLAFWKERSRR 601
+ + DEF+ Y E + + +ELD Y+ E + S +FD+L++W+ R
Sbjct: 607 DSMDDTLMENEDDEFQNYLHELKDYDQVESNELDKYMSEPLLKHSGQFDILSWWRGRVAE 666
Query: 602 SPNLARMACDILSIPITTVASESAFSIGARVVNRYRSSMKDDSVQALLCARSWL 655
P L ++A D+L+I ++TVASESAFS G RVV+ YR+ + + V+AL+C + W+
Sbjct: 667 YPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 720
>HOBO_DROME (P12258) Transposable element Hobo transposase
Length = 644
Score = 68.9 bits (167), Expect = 4e-11
Identities = 135/642 (21%), Positives = 256/642 (39%), Gaps = 91/642 (14%)
Query: 26 EVSSDPKDKKRKGKAKAKDKDTGKVKSQGKALTSDVWLYLVKV-----GIVDGVEKCRCK 80
E + K+K G +K GK S +W L + ++DG CR
Sbjct: 52 EAADFVKNKINNGTYSVANKHKGK---------SVIWSILCDILKEDETVLDGWLFCR-- 100
Query: 81 ACHKLLTCESGSGTSHLKRHVRSCSKTIKNHDVGEMMIDVEGKLRKKKFDPMANREFLAR 140
C K+L TS+L RH C T++ +++ + + K+ +K ++
Sbjct: 101 QCQKVLKFLH-KNTSNLSRH--KCCLTLRRPTELKIVSENDKKVAIEKCTQWVVQDCRPF 157
Query: 141 IMITHGAPFNMVEW--KVFREYQKFLNDDCVFVSRNTIAKEILNVYRDEKQKLKSQLAQI 198
+T N+V++ ++ Y + ++ D + T++++ + +++ + S++ +
Sbjct: 158 SAVTGAGFKNLVKFFLQIGAIYGEQVDVDDLLPDPTTLSRKAKSDAEEKRSLISSEIKKA 217
Query: 199 --RGRVCLTSDCWT-ACSNEGYISLTAHYVNVNWKLESKILAFAHMEPPHS-GRDLALKV 254
GR T D WT ++ +T HY +KL IL M S ++ +K+
Sbjct: 218 VDSGRASATVDMWTDQYVQRNFLGITFHYEK-EFKLCDMILGLKSMNFQKSTAENILMKI 276
Query: 255 LEMLDDWGIEKKIFSITLDNASANNSMANFLKEHLGLSNSLLLDGEFFHIRCSAHILNLI 314
+ ++ +E +DN F+ + G + L+G + CS+H+L+ +
Sbjct: 277 KGLFSEFNVEN------IDNVK-------FVTDR-GANIKKALEGNT-RLNCSSHLLSNV 321
Query: 315 VQDGLKVVSDALHKIRQSVAYVRVTESRTLLFSECVRIVGDIDTTIGLRLDCVTRWNSTF 374
++ ++ ++ V+ + L + ++TT L+ C TRWNS +
Sbjct: 322 LEKSFNEANELKKIVKSCKKIVKYCKKSNLQHT--------LETT--LKSACPTRWNSNY 371
Query: 375 IMLQSAL-VYRRAFYSLSLRDSNFKCCPTSEEWRRAEIMCEILKPFFTITNLISGSSYPT 433
M++S L +R L D + +S +++ +IL F I + SS P+
Sbjct: 372 KMMKSILDNWRSVDKILGEADIHVDFNKSS-----LKVVVDILGDFERIFKKLQTSSSPS 426
Query: 434 SNLYFGEIWKIECLIRSY---LTSEDLLIQKMAENM------------KVKFDKYWSDYN 478
I KI L L++ LL +++ EN+ K F Y +
Sbjct: 427 ICFVLPSISKILELCEPNILDLSAAALLKERILENIRKIWMANLSIWHKAAFFLYPPAAH 486
Query: 479 V---------VLAVGAVLDPTKKFNFLKFAYEKLDPLTSEEKLKKVKMTLGKLFSEYIKN 529
+ V + + P L+ P T E +
Sbjct: 487 LQEEDILEIKVFCISQIQVPISYTLSLESTETPRTPETPETPETPETPETPETPETPETP 546
Query: 530 GIPSNLSSSQVQPSYGGGTRITSSSYDEF----EEYESQSS-NSTGKSELDTYLDELRMP 584
P +L S + P T SS +EF ES S+ N + E++ Y+ + R+P
Sbjct: 547 ETPESLESPNLFPK----KNKTISSENEFFFPKPVTESNSNFNESPLDEIERYIRQ-RVP 601
Query: 585 LSQEFDVLAFWKERSRRSPNLARMACDILSIPITTVASESAF 626
LSQ F+V+ +WK + P L+++A +LSIP ++ + F
Sbjct: 602 LSQNFEVIEWWKNNANLYPQLSKLALKLLSIPASSAELKECF 643
>ZBE4_HUMAN (O75132) Zinc finger BED domain containing protein 4
Length = 1171
Score = 67.0 bits (162), Expect = 2e-10
Identities = 111/525 (21%), Positives = 210/525 (39%), Gaps = 69/525 (13%)
Query: 131 PMANR--EFLARIMITHGAPFNMVEWKVFREYQKFLNDDCVFVSRNTIAKEIL-NVYRDE 187
P+A + +A ++ P++ V+ F ++L + + ++ + +Y +
Sbjct: 653 PVAKKITSLIAEMIALDLQPYSFVDNVGFNRLLEYLKPQYSLPAPSYFSRTAIPGMYDNV 712
Query: 188 KQKLKSQLAQIR-GRVCLTSDCWTACSNEGYISLTAHYVNVNWKLE--------SKILAF 238
KQ + S L + G + TS W + Y++LTAH+V+ S +L
Sbjct: 713 KQIIMSHLKEAESGVIHFTSGIWMSNQTREYLTLTAHWVSFESPARPRCDDHHCSALLDV 772
Query: 239 AHMEPPHSGRDLALKVLEMLDDWGIEKKI-FSITL-DNASANNSMANFLKEHLGLSNSLL 296
+ ++ +SG + ++ + W + IT+ DNAS + L
Sbjct: 773 SQVDCDYSGNSIQKQLECWWEAWVTSTGLQVGITVTDNASIGKT---------------L 817
Query: 297 LDGEFFHIRCSAHILNLIVQDGLK---VVSDALHKIRQSVAYVRVTESRTLLFSECVRIV 353
+GE ++C +H +NLIV + +K +V + L R+ V + +E R
Sbjct: 818 NEGEHSSVQCFSHTVNLIVSEAIKSQRMVQNLLSLARKICERVHRSPKAKEKLAELQREY 877
Query: 354 GDIDTTIGLRLDCVTRWNSTFIMLQSALVYRRAFYSLSLRDSNFKCCPTSEEWRRAEIMC 413
L D ++W+++F ML+ + +RA +S+ + NF+ + ++W + +C
Sbjct: 878 A--LPQHHLIQDVPSKWSTSFHMLERLIEQKRAINEMSV-ECNFRELISCDQWEVMQSVC 934
Query: 414 EILKPFFTITNLISGSSYPTSNLY-FGEIW--KIECLIRSYLTSEDLLIQKMAENMKVKF 470
LKPF + +S S + I K+E L + D +++ + E M +
Sbjct: 935 RALKPFEAASREMSTQMSTLSQVIPMVHILNRKVEMLFEETM-GIDTMLRSLKEAMVSRL 993
Query: 471 DKYWSDYNVVLAVGAVLDPTKKFNFLKFAYEKLDPLTSEEKLKKVKMTLGKLFSEYIKNG 530
D V A +LDP K + L +EE+ ++ K L I+
Sbjct: 994 SATLHDPRYVFA--TLLDPRYKAS-----------LFTEEEAEQYKQDL-------IREL 1033
Query: 531 IPSNLSSSQVQPSY---GGGTRITSSSYDEFEEYESQSSNSTGKSELD-----TYLDELR 582
N +S V S+ G S++ + ++ + +L YL+E
Sbjct: 1034 ELMNSTSEDVAASHRCDAGSPSKDSAAEENLWSLVAKVKKKDPREKLPEAMVLAYLEE-- 1091
Query: 583 MPLSQEFDVLAFWKERSRRSPNLARMACDILSIPITTVASESAFS 627
L D L +W + P L+ +A L P + V SE F+
Sbjct: 1092 EVLEHSCDPLTYWNLKKASWPGLSALAVRFLGCPPSIVPSEKLFN 1136
>ZBE1_HUMAN (O96006) Zinc finger BED domain containing protein 1
(dREF homolog) (Putative Ac-like transposable element)
Length = 694
Score = 65.1 bits (157), Expect = 6e-10
Identities = 114/543 (20%), Positives = 221/543 (39%), Gaps = 55/543 (10%)
Query: 129 FDPMANREFLARIM--ITHGA-PFNMVEWKVFREYQKFLNDDCVFVSRNTIA-KEILNVY 184
+D +E A ++ I G P ++V+ F+ K + SR I+ K I Y
Sbjct: 118 YDSKKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKY 177
Query: 185 RDEKQKLKSQLAQIRGRVC-LTSDCWTACS-NEGYISLTAHYVNVN----WKLESKILAF 238
++ + +LA+ C +++D W + + N Y++L AH++ + + S+ L
Sbjct: 178 GAVREVILKELAEATW--CGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKT 235
Query: 239 AHMEPPHSGRDLALKVLEMLDDWGIEKKIFSITLDNASANNSMANFLKEHLGLSNSLLLD 298
+ ++ + + E+ +WGI K+F T N+ K+ + + LLD
Sbjct: 236 FEVPEENTAETITRVLYEVFIEWGISAKVFGAT----------TNYGKDIVKACS--LLD 283
Query: 299 GEFFHIRCSAHILNLIVQDGLKV--VSDALHKIRQSVAYVRVTESRTLLFSECVRIVGDI 356
H+ C H N +Q ++ + L + R+ V Y + +S ++ +
Sbjct: 284 VAV-HMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQ--QSAVAMYMLYEKQKQQN 340
Query: 357 DTTIGLRLDCVTRWNSTFIMLQSALVYRRAFYSLSLRDSN-FKCCPTSEEWRRAEIMCEI 415
L + V+ W ST MLQ + + + DSN + EW E + E+
Sbjct: 341 VAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVEL 400
Query: 416 LKPFFTITNLISGSSYPTSNLYFGEIWKIECLIRSYLTSEDLLIQKMAENMKVKFDKYWS 475
L+PF + ++S S YPT ++ + + + ++ + E + + K +
Sbjct: 401 LQPFKQVAEMLSASRYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQ 460
Query: 476 ---DYNVVLAVGAVLDPT-KKFNFLK-FAYEKLDPLTSEEK---LKKVK-----MTLGKL 522
+ ++ L V LDP K+ FL F ++++ EE L KVK K+
Sbjct: 461 ETPEIDMFLNVATFLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKI 520
Query: 523 FSEYIKNGIPSNLSSSQVQPSYGGGTRIT-----SSSYDEFEEYESQSSNSTGKSELDTY 577
F + + + +S P+ + + ++ EE+ +Q EL +
Sbjct: 521 FPVPEEPPVKKLMRTSTPPPASVINNMLAEIFCQTGGVEDQEEWHAQV-----VEELSNF 575
Query: 578 LDELRMPLSQEFDVLAFWKERSRRSPNLARMACDILSIPITTVASESAFSIGARVVNRYR 637
+ + L++ D L +W +R P L ++ + T VA E F A VV+ R
Sbjct: 576 KSQKVLGLNE--DPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSAANVVSAKR 633
Query: 638 SSM 640
+ +
Sbjct: 634 NRL 636
>YLZ5_CAEEL (P34418) Hypothetical protein F42H10.5 in chromosome III
Length = 810
Score = 40.8 bits (94), Expect = 0.012
Identities = 61/277 (22%), Positives = 112/277 (40%), Gaps = 33/277 (11%)
Query: 374 FIMLQSALVYRRAFYSLSLRDSNFKCCPTSEEWRRA---EIMCEILKPFFTITNLIS--G 428
F ++ LV R Y +++ + EW + + I KPF T + ++
Sbjct: 503 FHVIVEHLVAHRDIYQMNMEGITLI---SEREWNKVTGIHHLMNIFKPFMTYSTDMTTVD 559
Query: 429 SSYPT----SNLYFGEIWKIECLIRSYLTSEDLLIQKMAENMKVKFDKYWSDYNVVLAVG 484
+ PT N+ +I+ + + LTS L Q +A M + + + S Y A+
Sbjct: 560 TVIPTIVQIQNVLEKDIYHLGDIGSDLLTS---LKQTVAPIMNPEHENFDSTYIQATALN 616
Query: 485 AVLDPTKKFNFLKFAYEKLDPLTSEEKLKKVKMTLGKLFSEYIKNGIPSNLSSSQVQPSY 544
L T + + A ++ S K K K + G+ S L++ +
Sbjct: 617 PQLAVTLTSDQMTTAKSLIETEISRRTKKMRKAQSDKKLAM----GVDSLLANVMRKNDG 672
Query: 545 G--GGTRITSSSYDEFEEYESQSSNSTGKSELDTYLDELRMPLSQEFDV----------- 591
G GG + Y + + + +S+ + ++ ++ Y DE+ S E
Sbjct: 673 GSDGGCETALAIYGDLFQSITGNSSESKENIVNQYFDEISSTTSVESMFMLRTFGNPMQA 732
Query: 592 -LAFWKERSRRSPNLARMACDILSIPITTVASESAFS 627
L++WK S R L+ +A ++LSIPI T+ +E S
Sbjct: 733 PLSYWKSCSSRCSELSDLATELLSIPIFTLTAERVLS 769
>RPSD_BACSU (P10726) RNA polymerase sigma-D factor (Sigma-28)
Length = 254
Score = 36.6 bits (83), Expect = 0.22
Identities = 24/78 (30%), Positives = 40/78 (50%), Gaps = 12/78 (15%)
Query: 459 IQKMAENMKVKFDKYWSDYNVVLAVGAVLDPTKKFNFLKFAYEKLDPLTSEEKLKKVKMT 518
++K + +KFD Y S GA++D +K ++L P TS EK KKV+
Sbjct: 67 LEKFDPSRDLKFDTYAS----FRIRGAIIDGLRKEDWL--------PRTSREKTKKVEAA 114
Query: 519 LGKLFSEYIKNGIPSNLS 536
+ KL Y++N P+ ++
Sbjct: 115 IEKLEQRYLRNVSPAEIA 132
>SYA_WIGBR (Q8D2W8) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 873
Score = 34.7 bits (78), Expect = 0.85
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 383 YRRAFYSLSLRDSNFKCCPTSEEWRRAEIMCEILKPFFTI---TNLISGSSYPTSNLY-- 437
Y+ L++ D + + C + R +I C ++ F I T I + T+ +
Sbjct: 644 YKDLVRVLNIGDFSIELCGGTHANRTGDIGCFVITNFSKISSDTYRIKAITGETAIAFIQ 703
Query: 438 --FGEIWKIECLIRSYLTSEDLLIQKMAENMKVKFDKYWSDYNVVLA--VGAVLDPTKKF 493
F +I I LI+S I+K+ EN+K+ K + N ++ + + + KK
Sbjct: 704 KKFNDINTISSLIKSNSNEIVNKIEKITENLKILEKKNKNLKNKIIKNYIKLIFNKIKKI 763
Query: 494 N----FLKFAYEKLDPLTSEEKLKKVKMTLG---------KLFSEYIKNGIPSNL 535
N + + E++D + E L KVK L K + YI G+ +NL
Sbjct: 764 NNFEIIMDYFNEEIDKIILREILNKVKTNLKNGIVILASIKKDNLYIVTGVTNNL 818
>YUY1_CAEEL (P54073) Hypothetical protein F44G4.1 in chromosome II
Length = 384
Score = 34.3 bits (77), Expect = 1.1
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 93 GTSHLKRHVRSCSKTIKNHD---VGEMMIDVEGKLRKKKFDPMANREFLARIMITHGAPF 149
G S ++ V ++++ +D V E +VE +F P NRE ++MIT
Sbjct: 128 GESAPQKEVPKTIESMREYDATMVNEEDDEVEHDEANDEFAPYFNRETSPKVMITMTPKA 187
Query: 150 NMVEWKVFREYQKFLNDDCVFVSRNTIAKEILNVYRDEK 188
+ +K E QK + + +F +N + K I+ ++ +
Sbjct: 188 KITTFKFCFELQKCIPNSEIFTRKNVLLKTIIEQAKERE 226
>YYAN_BACSU (P37510) Putative HTH-type transcriptional regulator
yyaN
Length = 138
Score = 33.1 bits (74), Expect = 2.5
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 486 VLDPTKKFNFLKFAYEKLDP--LTSEEKLKKVKMTLGKLFSEYIKNG-----IPSNLSSS 538
+L P K+ N + Y + D + + LK+ M+L + +E++K+G I S++ S+
Sbjct: 28 LLPPPKRKNSGRRFYTETDIQFMLFLKSLKETGMSLEDI-NEFVKDGCILEKINSDVKSA 86
Query: 539 QVQPSYGGGTRITSSSYDEFE--EYESQSSNSTGKSELDTYLDELR 582
Q+ PS I + ++ E + E + ST K +LDTY L+
Sbjct: 87 QLSPSINKRIEILTKHLEKMEIKKRELEEVISTTKGKLDTYYSILK 132
>VGLM_BUNL7 (P09612) M polyprotein precursor [Contains: Glycoprotein
G2; Nonstructural protein NS-M; Glycoprotein G1]
Length = 1441
Score = 32.3 bits (72), Expect = 4.2
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 164 LNDDCVFVSRNTIAKEILNVYRDEKQKLKSQLAQIRGRVCLTSDCWTACSN 214
++D CVF S I KE L+VYR E +++ + +CLT T C+N
Sbjct: 1076 VSDGCVFGSCQDIIKEELSVYRKETEEVTNV------ELCLTFSDKTYCTN 1120
>UBP4_MOUSE (P35123) Ubiquitin carboxyl-terminal hydrolase 4 (EC
3.1.2.15) (Ubiquitin thiolesterase 4)
(Ubiquitin-specific processing protease 4)
(Deubiquitinating enzyme 4) (Ubiquitous nuclear protein)
Length = 962
Score = 32.3 bits (72), Expect = 4.2
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 514 KVKMTLGKLF-------SEYIKNGIPSNLSSSQVQPSYGGGTRITSSSYDEFEEYESQSS 566
K K+TL L+ S YIK +P SS ++P G+R +S DE EE + Q
Sbjct: 611 KHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPGACNGSR-SSYEGDEEEEMDHQEE 669
Query: 567 NSTGKSELD 575
SE++
Sbjct: 670 GKEQLSEVE 678
>UBP4_HUMAN (Q13107) Ubiquitin carboxyl-terminal hydrolase 4 (EC
3.1.2.15) (Ubiquitin thiolesterase 4)
(Ubiquitin-specific processing protease 4)
(Deubiquitinating enzyme 4) (Ubiquitous nuclear protein
homolog)
Length = 963
Score = 32.3 bits (72), Expect = 4.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 514 KVKMTLGKLF-------SEYIKNGIPSNLSSSQVQPSYGGGTRITSSSYDEFEEYESQSS 566
K K+TL L+ S Y+K +P SS ++P G+R + DE EE E Q
Sbjct: 611 KHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGACNGSRNSCEGEDE-EEMEHQEE 669
Query: 567 NSTGKSELD 575
SE +
Sbjct: 670 GKEQLSETE 678
>GAAB_PICTO (Q6L1Q1) GMP synthase [glutamine-hydrolyzing] subunit B
(EC 6.3.5.2) (GMP synthetase)
Length = 305
Score = 32.3 bits (72), Expect = 4.2
Identities = 41/159 (25%), Positives = 64/159 (39%), Gaps = 22/159 (13%)
Query: 469 KFDKYWSDYNVVLAVGAVLDPTKKFNFLKFAYEKLDPLTSEEKLKKVKMTLGKLFSEYIK 528
+ + +S YNV G +LD + F + DP EEK K + T ++F E K
Sbjct: 63 RIKEIFSSYNVN---GRILDRSSLF--ISRLRNVTDP---EEKRKIIGRTFIEVFEEEAK 114
Query: 529 NGIPSNLSSSQVQPSY---GGGTRITSSSYDEFEEYESQSSNSTGKSELDTYLDELR--- 582
N +L + P + GGG+R T S+ + + + D Y DE+R
Sbjct: 115 NYGAESLLQGTIAPDWIESGGGSRDTIKSHHNVGGLPEKMNLRLVEPLRDLYKDEVREVS 174
Query: 583 ----MPLSQEFD----VLAFWKERSRRSPNLARMACDIL 613
+P Q F + E + N+ R A DI+
Sbjct: 175 RYLGLPEVQPFPGPGLAIRIIGEVTEEKLNILRRATDIV 213
>ORN_ARATH (Q9ZVE0) Probable oligoribonuclease (EC 3.1.-.-)
Length = 227
Score = 32.0 bits (71), Expect = 5.5
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 247 GRDLALK----VLEMLDDW--------GIEKKIFSITLDNASANNSMANFLKEHLGLSNS 294
G DL ++ L+ +DDW G+ KK+ + A + F+K+H+G N
Sbjct: 62 GPDLVVRQTKDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNP 121
Query: 295 LL 296
LL
Sbjct: 122 LL 123
>HTPG_BUCAI (P57555) Chaperone protein htpG (Heat shock protein
htpG) (High temperature protein G)
Length = 624
Score = 32.0 bits (71), Expect = 5.5
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 27/152 (17%)
Query: 445 ECLIRSYLTSEDLLIQKMAENMKVKFDKYWSDYNVVLAVGAVLDP---TKKFNFLKFAYE 501
E L +S + +++K+A+ K+ +W+ + +VL G D K N L+F
Sbjct: 346 EKLRKSLIKKSLSMLEKLAQKNNEKYQIFWNQFGLVLKEGPAEDHENLNKIANLLRFTSM 405
Query: 502 KLDPLTSEEKLKKVKMTLGKLFSEYIKNGIPSNLSSSQVQPSYGGGTRITSSSY---DEF 558
K + SE+K+ EYI SN++ Q + Y IT+ SY +
Sbjct: 406 KSN--NSEQKMS---------LKEYI-----SNMNEQQEKIYY-----ITADSYSSANNS 444
Query: 559 EEYESQSSNSTGKSELDTYLDELRMPLSQEFD 590
E N+ L +DE M EF+
Sbjct: 445 PHLELFKKNNIDVLLLSDRIDEWMMNYLSEFE 476
>KF1A_MOUSE (P33173) Kinesin-like protein KIF1A (Axonal transporter
of synaptic vesicles)
Length = 1695
Score = 31.6 bits (70), Expect = 7.2
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 535 LSSSQVQPSYGGGTRITSS---SYDE--FEEYESQSSNSTGKSELDTYLDELRM 583
+S+ + P YG G R + + S+D+ FE+++S+S G S T +ELR+
Sbjct: 890 ISADEEAPDYGSGVRQSGTAKISFDDQHFEKFQSESCPVVGMSRSGTSQEELRI 943
>KF1A_HUMAN (Q12756) Kinesin-like protein KIF1A (Axonal transporter
of synaptic vesicles)
Length = 1690
Score = 31.6 bits (70), Expect = 7.2
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 535 LSSSQVQPSYGGGTRITSS---SYDE--FEEYESQSSNSTGKSELDTYLDELRM 583
+S+ + P YG G R + + S+D+ FE+++S+S G S T +ELR+
Sbjct: 890 ISADEEAPDYGSGVRQSGTAKISFDDQHFEKFQSESCPVVGMSRSGTSQEELRI 943
>UL49_HHV7J (P52442) Protein U33
Length = 477
Score = 31.2 bits (69), Expect = 9.4
Identities = 26/97 (26%), Positives = 45/97 (45%), Gaps = 14/97 (14%)
Query: 411 IMCEILKPFFTITNLISGSSYPTSNLYF-GEIWKIE-CLIRSYLTSEDLLIQKMAENMKV 468
++C ++ P L SY L+ G++ K E C++ ++T++ L + + +N
Sbjct: 7 LLCRLISP------LCKHGSYSHLQLFLIGDVSKSENCVLSMFVTNKKFLSKDLTDNFYR 60
Query: 469 KFDKYW-----SDYNVVLAVGAVLDPTKKFNFLKFAY 500
KF K W N + A+ + TK F FL AY
Sbjct: 61 KFLKVWLKCDLDSRNQIKAIFNKMMMTKNF-FLLLAY 96
>SYA_MYCMS (P61704) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 896
Score = 31.2 bits (69), Expect = 9.4
Identities = 25/93 (26%), Positives = 46/93 (48%), Gaps = 7/93 (7%)
Query: 429 SSYPTSNLYFGEIWKI-----ECLIRSYLTSEDLLIQKMAENMKVKFDKYWSDYNVVLAV 483
+S+ N Y E +K+ E +I Y ++DLL EN+ ++ + + +L +
Sbjct: 710 TSFRAVNEYLNEQFKVYKDQAESIIDKYNQNKDLLKNDQLENIYLQIKNTTINKDNLLVI 769
Query: 484 GAVLDPTKKFNFLKFAYEKLDPLTSEEKLKKVK 516
+LD +K+ N K +K++ L + KL K K
Sbjct: 770 KNLLDQSKEVN--KDYDKKVNDLITANKLLKYK 800
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,647,135
Number of Sequences: 164201
Number of extensions: 3154606
Number of successful extensions: 9543
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 9516
Number of HSP's gapped (non-prelim): 29
length of query: 679
length of database: 59,974,054
effective HSP length: 117
effective length of query: 562
effective length of database: 40,762,537
effective search space: 22908545794
effective search space used: 22908545794
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Medicago: description of AC148607.13