Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148485.3 - phase: 0 /pseudo
         (138 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YOH5_YEAST (Q08234) Probable ATP-dependent transporter YOL074C/Y...    33  0.14
CGR1_CANGA (O74208) ATP-binding cassette transporter CGR1 (Pleom...    30  1.2
PDRF_YEAST (Q04182) ATP-dependent permease PDR15                       30  1.6
PYRF_BUCAI (P57358) Orotidine 5'-phosphate decarboxylase (EC 4.1...    29  2.7
PDRA_YEAST (P51533) ATP-dependent permease PDR10                       29  3.5
ABG2_HUMAN (Q9UNQ0) ATP-binding cassette, sub-family G, member 2...    28  4.5
Y9G8_BRAJA (Q89LH6) Hypothetical UPF0271 protein blr4568               28  5.9
PDRB_YEAST (P40550) ATP-dependent permease PDR11                       28  7.7

>YOH5_YEAST (Q08234) Probable ATP-dependent transporter
           YOL074C/YOL075C
          Length = 1294

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 104 IIKILGLDFCADTMVGGDMIRGTLSGPKRELEL 136
           +I+ LGL  CADT+VG +  RG   G KR L +
Sbjct: 164 LIEELGLKDCADTLVGDNSHRGLSGGEKRRLSI 196



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/36 (30%), Positives = 21/36 (57%)

Query: 101 TGYIIKILGLDFCADTMVGGDMIRGTLSGPKRELEL 136
           T  +I+ LGL  C + ++G + ++G   G KR + +
Sbjct: 814 TDNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTM 849


>CGR1_CANGA (O74208) ATP-binding cassette transporter CGR1
           (Pleomorphic drug resistance homolog)
          Length = 1542

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/41 (31%), Positives = 21/41 (50%)

Query: 98  NIVTGYIIKILGLDFCADTMVGGDMIRGTLSGPKRELELVK 138
           N VT   +   GL    DT VG D++RG   G ++ + + +
Sbjct: 280 NHVTDVAMATYGLSHTRDTKVGNDLVRGVSGGERKRVSIAE 320


>PDRF_YEAST (Q04182) ATP-dependent permease PDR15
          Length = 1529

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/41 (31%), Positives = 21/41 (50%)

Query: 98  NIVTGYIIKILGLDFCADTMVGGDMIRGTLSGPKRELELVK 138
           N VT   +   GL    DT VG D++RG   G ++ + + +
Sbjct: 291 NHVTEVAMATYGLSHTRDTKVGNDLVRGVSGGERKRVSIAE 331


>PYRF_BUCAI (P57358) Orotidine 5'-phosphate decarboxylase (EC
           4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase)
          Length = 236

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 16  VLHDVSGIIKPKRSSEFWKDYIVVG 40
           +L+D + II PK + E+  DYIV+G
Sbjct: 191 LLYDQNNIITPKEAKEYKIDYIVIG 215


>PDRA_YEAST (P51533) ATP-dependent permease PDR10
          Length = 1564

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 109 GLDFCADTMVGGDMIRGTLSGPKRELELVK 138
           GL   ADT VG D +RG   G ++ + + +
Sbjct: 312 GLSHTADTKVGNDFVRGVSGGERKRVSIAE 341


>ABG2_HUMAN (Q9UNQ0) ATP-binding cassette, sub-family G, member 2
           (Placenta-specific ATP-binding cassette transporter)
           (Breast cancer resistance protein)
          Length = 655

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 104 IIKILGLDFCADTMVGGDMIRGTLSGPKRELEL 136
           +I+ LGLD  AD+ VG   IRG   G ++   +
Sbjct: 164 VIEELGLDKVADSKVGTQFIRGVSGGERKRTSI 196


>Y9G8_BRAJA (Q89LH6) Hypothetical UPF0271 protein blr4568
          Length = 256

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/38 (44%), Positives = 21/38 (54%), Gaps = 2/38 (5%)

Query: 7   ILSRKKPLAVLHDVSGIIKPKRSSEFWKDYIVVGIGGK 44
           ++SRKKP AVLHD   I    R     +D  VV + GK
Sbjct: 178 LVSRKKPGAVLHDAKAI--ADRVVRMVQDGAVVSVTGK 213


>PDRB_YEAST (P40550) ATP-dependent permease PDR11
          Length = 1410

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/35 (28%), Positives = 19/35 (53%)

Query: 104 IIKILGLDFCADTMVGGDMIRGTLSGPKRELELVK 138
           ++K  GL     T VG D +RG   G ++ + +++
Sbjct: 149 LLKEFGLSHVKKTYVGNDYVRGVSGGERKRISIIE 183


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.351    0.160    0.530 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,545,017
Number of Sequences: 164201
Number of extensions: 424073
Number of successful extensions: 1621
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1612
Number of HSP's gapped (non-prelim): 10
length of query: 138
length of database: 59,974,054
effective HSP length: 99
effective length of query: 39
effective length of database: 43,718,155
effective search space: 1705008045
effective search space used: 1705008045
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 60 (27.7 bits)


Medicago: description of AC148485.3