BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148406.1 + phase: 0 
         (114 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RRN7_YEAST (P40992) RNA polymerase I specific transcription init...    27  6.4
FTSH_CHLVU (P56369) Cell division protein ftsH homolog                 27  6.4
METE_CAMJE (Q9PN94) 5-methyltetrahydropteroyltriglutamate--homoc...    27  8.4

>RRN7_YEAST (P40992) RNA polymerase I specific transcription
           initiation factor RRN7
          Length = 514

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 5/42 (11%)

Query: 29  EKRQLFLRSYQFCRKKS----LTE-RIKGSLVRAKKVVWLKL 65
           E + LFL+S+QF  K+     +TE R         K++WLK+
Sbjct: 99  EAKLLFLKSFQFILKRQIRWLITEMRFPKEFEHVAKIIWLKI 140


>FTSH_CHLVU (P56369) Cell division protein ftsH homolog
          Length = 1720

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 14/84 (16%)

Query: 38   YQFCRKKSLTERIKGSLV-RAKKVVWLKLRYARGLR-------------RKLVFFPRFKC 83
            ++F R   LTERI G    +A + ++L    + GL              +KLV+F    C
Sbjct: 1353 FEFARLWELTERIIGCYAGKAAEFLFLCKFSSTGLSEISTLGLEDQVFAQKLVYFMLENC 1412

Query: 84   GFYYRRRRFSQLLNNSGSSHHRKV 107
             FY ++    Q +  S +S+ +++
Sbjct: 1413 HFYSKKNAIQQAMKMSPNSNLKEL 1436


>METE_CAMJE (Q9PN94)
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 754

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 1   MGSVTMNPLFRTESFGYYNFPDQNYTMIEKRQLFLRSYQFCRKKSLTER 49
           + S   NPLFR     + N P++    ++ R   L+   F R  S  ER
Sbjct: 364 LNSSEENPLFRANQELFKNIPERLDEKVKARLKALKKEDFTRTPSFKER 412


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.329    0.140    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,794,996
Number of Sequences: 164201
Number of extensions: 427291
Number of successful extensions: 913
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 911
Number of HSP's gapped (non-prelim): 4
length of query: 114
length of database: 59,974,054
effective HSP length: 90
effective length of query: 24
effective length of database: 45,195,964
effective search space: 1084703136
effective search space used: 1084703136
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)