BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148403.7 - phase: 0
(315 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PRH_ARATH (P48785) Pathogenesis-related homeodomain protein (PRHA) 40 0.006
USO1_YEAST (P25386) Intracellular protein transport protein USO1 39 0.022
YVEK_BACSU (P71050) Hypothetical protein yveK 36 0.11
TPM2_DROME (P09491) Tropomyosin 2 (Tropomyosin I) 36 0.11
RA50_THEVO (P58302) DNA double-strand break repair rad50 ATPase 36 0.11
IF38_SCHPO (O14164) Probable eukaryotic translation initiation f... 36 0.14
YOS2_SCHPO (Q9P7M1) Protein C21C3.02c in chromosome II 35 0.19
DYHC_MOUSE (Q9JHU4) Dynein heavy chain, cytosolic (DYHC) (Cytopl... 35 0.19
DYHC_HUMAN (Q14204) Dynein heavy chain, cytosolic (DYHC) (Cytopl... 35 0.19
RPF2_HUMAN (O60858) Ret finger protein 2 (Leukemia associated pr... 35 0.24
SPOF_SCHPO (Q10411) Sporulation-specific protein 15 35 0.32
DYHC_RAT (P38650) Dynein heavy chain, cytosolic (DYHC) (Cytoplas... 35 0.32
YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF463... 34 0.42
CAGA_HELPY (P55980) Cytotoxicity associated immunodominant antig... 34 0.42
RPC2_CYACA (Q9TM34) DNA-directed RNA polymerase beta'' chain (EC... 34 0.54
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 34 0.54
PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin) 33 0.71
MYSJ_DICDI (P54697) Myosin IJ heavy chain 33 0.71
MRC1_SCHPO (Q9P7T4) Mediator of replication checkpoint protein 1... 33 0.71
MIX1_CAEEL (Q09591) Mitotic chromosome and X-chromosome associat... 33 0.71
>PRH_ARATH (P48785) Pathogenesis-related homeodomain protein (PRHA)
Length = 796
Score = 40.4 bits (93), Expect = 0.006
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 43 KSSETISLEVSEEDEDHLNQSAMKLKETRINFKSSETSLEVSEEDKDDIIELVIEDHEHA 102
K S ISL+ + E+ N++ K+ + SSE SL+ + E+K+ +++ E HE
Sbjct: 608 KQSSEISLKTAVEE----NETESKMMKEPHEELSSEMSLKTAAEEKETESKMIEEPHEEL 663
Query: 103 LPQSAMVVKKTGINFKTSETSLKVSKEDEDHLN-----RSAMELKEAGISFKKSKTRSLK 157
+ ++ KT + K ET K+ +E D LN +A+E KE G + L
Sbjct: 664 SREMSL---KTAVEEK--ETESKMMEEPHDELNSEMSLSTAVEEKETGSKMTEESHEELS 718
Query: 158 D 158
+
Sbjct: 719 N 719
Score = 32.7 bits (73), Expect = 1.2
Identities = 39/144 (27%), Positives = 62/144 (42%), Gaps = 22/144 (15%)
Query: 11 ETSETISLEVSEEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKET 70
E ET S ++ EE + L+R M LK T + K +E+ ++ EE D LN
Sbjct: 647 EEKETES-KMIEEPHEELSRE-MSLK-TAVEEKETES---KMMEEPHDELN--------- 691
Query: 71 RINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLKVSKED 130
SE SL + E+K+ ++ E HE + ++ K+TG T E L+ E
Sbjct: 692 ------SEMSLSTAVEEKETGSKMTEESHEELSNEMSLEEKETGRKM-TEEEELEAVMEM 744
Query: 131 EDHLNRSAMELKEAGISFKKSKTR 154
+++ + FK K R
Sbjct: 745 LCRTENKLLDVTQRLDRFKTPKGR 768
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 38.5 bits (88), Expect = 0.022
Identities = 40/152 (26%), Positives = 70/152 (45%), Gaps = 7/152 (4%)
Query: 11 ETSETISLEVSEEDEDHLNRSAMELKYTGINFK---SSETISLEVSEEDEDHLNQSAMKL 67
ETSE EV +E+E+HL ++L+ K +S +LE E++ + L K
Sbjct: 1106 ETSEKALKEV-KENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKY 1164
Query: 68 KETRINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLKVS 127
+E N K + + E+S+ +D I +++E ++ + + TSE +
Sbjct: 1165 EEQIAN-KERQYNEEISQ--LNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLK 1221
Query: 128 KEDEDHLNRSAMELKEAGISFKKSKTRSLKDV 159
K + D LN ELK+ + + S S+K V
Sbjct: 1222 KSEIDALNLQIKELKKKNETNEASLLESIKSV 1253
Score = 36.2 bits (82), Expect = 0.11
Identities = 34/131 (25%), Positives = 60/131 (44%), Gaps = 15/131 (11%)
Query: 22 EEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKETRINFKSSETSL 81
E++ + L ++ +L+ T E IS S +DE S +K K ET+
Sbjct: 1021 EKNIEQLKKTISDLEQT-----KEEIISKSDSSKDEYESQISLLKEK--------LETAT 1067
Query: 82 EVSEEDKDDIIELVI--EDHEHALPQSAMVVKKTGINFKTSETSLKVSKEDEDHLNRSAM 139
++E+ + I EL E+ E L + + +TSE +LK KE+E+HL +
Sbjct: 1068 TANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKI 1127
Query: 140 ELKEAGISFKK 150
+L++ K+
Sbjct: 1128 QLEKEATETKQ 1138
>YVEK_BACSU (P71050) Hypothetical protein yveK
Length = 234
Score = 36.2 bits (82), Expect = 0.11
Identities = 40/187 (21%), Positives = 79/187 (41%), Gaps = 27/187 (14%)
Query: 1 MELKYTGINFETSETISLEVSE-EDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDH 59
++ K ++ S + + S+ E+ +L+ L+Y+ ++ +L + E H
Sbjct: 35 VQFKVISPTYQASTQVLVHESDGEENSNLSDIQRNLQYSSTFQSIMKSTALMEEVKAELH 94
Query: 60 LNQSAMKLKETRINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKT 119
L++SA LK + S E++ +II + ++DH+ P A + T +N
Sbjct: 95 LSESASSLK----------GKVVTSSENESEIINVAVQDHD---PAKAAEIANTLVN--- 138
Query: 120 SETSLKVSKEDEDHLNRSAME-LKEAGISFKKSKTRSLKDVSFNRGVLRLPKLVVDDHTE 178
K KE ++ +N + L EA K S++ +K V+ V+ T
Sbjct: 139 -----KFEKEVDERMNVQGVHILSEA----KASESPMIKPARLRNMVMAFGAAVMGGITL 189
Query: 179 CMFLNLI 185
FL+ +
Sbjct: 190 AFFLHFL 196
>TPM2_DROME (P09491) Tropomyosin 2 (Tropomyosin I)
Length = 284
Score = 36.2 bits (82), Expect = 0.11
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 18 LEVSEEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKETRINFKSS 77
LE SEE + +E + + S++DE+ ++Q +LKE R+ + +
Sbjct: 99 LEKSEERSTTAQQKLLEATQSADENNRMCKVLENRSQQDEERMDQLTNQLKEARMLAEDA 158
Query: 78 ET-SLEVSE-----EDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLKVSKEDE 131
+T S EVS ED+ ++ E + E + + +K G + K+ E S + + +
Sbjct: 159 DTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEEELKVVGNSLKSLEVSEEKANQRV 218
Query: 132 DHLNRSAMELKEAGISFKKSKTRS 155
+ R E+K I K+++ R+
Sbjct: 219 EEFKR---EMKTLSIKLKEAEQRA 239
>RA50_THEVO (P58302) DNA double-strand break repair rad50 ATPase
Length = 895
Score = 36.2 bits (82), Expect = 0.11
Identities = 47/184 (25%), Positives = 74/184 (39%), Gaps = 34/184 (18%)
Query: 50 LEVSEEDEDHLNQSAMKLKETRINFKSSETSLEVSEEDKDDI-IELV----IEDHEHALP 104
+ + E +DHLN+ +L K E L S+ K I +E+V IE+ L
Sbjct: 227 INIKENKKDHLNEELHRLNAQLETIKKYEMELAESQSRKASIEMEVVKLPSIEEELKRLE 286
Query: 105 QSAMVVKKTG----INFKTSETSLK---------VSKEDEDHLNRSAMELKEAGISFKKS 151
+A VVK+ IN K SL +SK DE H R +L+ F +
Sbjct: 287 NNAAVVKRNEIIEYINLKKDLGSLSEIIEGLKSDLSKYDEAH--RKLEDLQSFRSEFLEK 344
Query: 152 KTR---------SLKDVSFN-----RGVLRLPKLVVDDHTECMFLNLIAFELLHVDGTRK 197
K R SLK+ N R + + K + ++ E ++ E+L +
Sbjct: 345 KKRKEDLDKLRSSLKEDEDNYQSAVRNIENIKKWIENEEKEIERMSAFISEILKIQEITP 404
Query: 198 EVIS 201
E+I+
Sbjct: 405 EIIN 408
>IF38_SCHPO (O14164) Probable eukaryotic translation initiation
factor 3 93 kDa subunit (eIF3 p93)
Length = 918
Score = 35.8 bits (81), Expect = 0.14
Identities = 42/141 (29%), Positives = 63/141 (43%), Gaps = 12/141 (8%)
Query: 11 ETSETISLEVSEEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKET 70
E+SE SEED + + S E + + + SE S E S+E E S +K E
Sbjct: 86 ESSEEEEETESEEDSEVSDESESESESESESEEESE--SEEESDESERSGPSSFLKKPEK 143
Query: 71 R------INFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSL 124
+ F E+S E S+E++ + +D + S M K N +S +
Sbjct: 144 EEAKPAGLKFLRGESSEESSDEEEGRRVVKSAKDKRYEEFISCMETIK---NAMSSNNWI 200
Query: 125 KVSKEDEDHLNRSAMELKEAG 145
VS E DHLN+ + + KEAG
Sbjct: 201 VVSNEF-DHLNKVSQKCKEAG 220
>YOS2_SCHPO (Q9P7M1) Protein C21C3.02c in chromosome II
Length = 491
Score = 35.4 bits (80), Expect = 0.19
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 11 ETSETISLEVSEE--DEDHLNRSAMELKYTGINFKSSETISL------EVSEEDEDHLNQ 62
ETS S+ V+E+ D + R+ + +++ I++ E E E+
Sbjct: 128 ETSLVGSVSVTEDLGDSSAIGRTILVNNSVEPQMENTANITIVSPSLKESDFESEEKATN 187
Query: 63 SAMKLKETRINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAMVVK-------KTGI 115
L ET N K E+S EED++ IE ED +H +PQ ++ ++G+
Sbjct: 188 DNNGLIETNHNSKLEESSEHEEEEDEESNIERT-EDSDHQIPQRGGTLEAPRKGGPRSGV 246
Query: 116 NF---KTSETSLKVSKEDEDHLNRSAMELKE 143
K + S K S E + R A+E +
Sbjct: 247 GSRKRKRATVSRKWSTNSESKIKRVALETSQ 277
>DYHC_MOUSE (Q9JHU4) Dynein heavy chain, cytosolic (DYHC) (Cytoplasmic
dynein heavy chain)
Length = 4644
Score = 35.4 bits (80), Expect = 0.19
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 20/189 (10%)
Query: 54 EEDEDHLNQSAMKLKET-------RINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQS 106
EE + HLN K+KET R + + LEV +D ++ +++D + A +
Sbjct: 3193 EEQQMHLNVGLRKIKETVDQVEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKK 3252
Query: 107 AMVVKKTGINFKTSETSLKVS---KEDEDHLNRSAMELKEAGISFKKSKTRSLKDVSFNR 163
M + K E KED D + + +E + A S KK ++ ++
Sbjct: 3253 VMSQEIQEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPP 3312
Query: 164 GVLRLPKLVVDDHTECMFLNLIAFELLHVDGTRKEVISFVCFIDTIID-SAVDVAILIRS 222
++L + C+ L + + + +I FI TI++ SA +++ IR
Sbjct: 3313 AAVKLAL-----ESICLLLGESTTDWKQI----RSIIMRENFIPTIVNFSAEEISDAIRE 3363
Query: 223 GIIINYLES 231
+ NY+ +
Sbjct: 3364 KMKKNYMSN 3372
>DYHC_HUMAN (Q14204) Dynein heavy chain, cytosolic (DYHC) (Cytoplasmic
dynein heavy chain 1) (DHC1) (Fragment)
Length = 4594
Score = 35.4 bits (80), Expect = 0.19
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 20/189 (10%)
Query: 54 EEDEDHLNQSAMKLKET-------RINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQS 106
EE + HLN K+KET R + + LEV +D ++ +++D + A +
Sbjct: 3143 EEQQMHLNVGLRKIKETVDQVEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKK 3202
Query: 107 AMVVKKTGINFKTSETSLKVS---KEDEDHLNRSAMELKEAGISFKKSKTRSLKDVSFNR 163
M + K E KED D + + +E + A S KK ++ ++
Sbjct: 3203 VMSQEIQEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPP 3262
Query: 164 GVLRLPKLVVDDHTECMFLNLIAFELLHVDGTRKEVISFVCFIDTIID-SAVDVAILIRS 222
++L + C+ L + + + +I FI TI++ SA +++ IR
Sbjct: 3263 AAVKLAL-----ESICLLLGESTTDWKQI----RSIIMRENFIPTIVNFSAEEISDAIRE 3313
Query: 223 GIIINYLES 231
+ NY+ +
Sbjct: 3314 KMKKNYMSN 3322
>RPF2_HUMAN (O60858) Ret finger protein 2 (Leukemia associated
protein 5) (B-cell chronic lymphocytic leukemia tumor
suppressor Leu5) (Putative tumor suppressor RFP2)
(Tripartite motif-containing protein 13)
Length = 407
Score = 35.0 bits (79), Expect = 0.24
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 11 ETSETISLEVSEEDEDHLNRSAMELKYTGINFKSS-----ETISLEVSEEDEDHLNQSAM 65
ETS+ SL++ +D D + +L++T K+ ET+ L V + + +N+
Sbjct: 165 ETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNT 224
Query: 66 KLKETRINFKSSETSLEVSE-----EDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTS 120
L+E R+ F +E +VSE + + E + E LP S + NF TS
Sbjct: 225 ILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTS 284
Query: 121 E 121
+
Sbjct: 285 Q 285
>SPOF_SCHPO (Q10411) Sporulation-specific protein 15
Length = 1957
Score = 34.7 bits (78), Expect = 0.32
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 25 EDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKETRINFKSSETSLEVS 84
++ L +S M+LK NF S +T +++E ++ N K+ K + + L+
Sbjct: 587 QEKLAKSVMQLKENEQNFSSLDTSFKKLNESHQELENNHQTITKQ----LKDTSSKLQQL 642
Query: 85 EEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLKVSKEDEDHLNRSAMELK-- 142
+ ++ + E E L ++ + + S SL +ED D L ++ LK
Sbjct: 643 QLERAN-----FEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKED 697
Query: 143 ----EAGISFKKSKTRSLKDVSFN 162
E + F K + ++L++V N
Sbjct: 698 LRKSEEALRFSKLEAKNLREVIDN 721
>DYHC_RAT (P38650) Dynein heavy chain, cytosolic (DYHC) (Cytoplasmic
dynein heavy chain) (MAP 1C)
Length = 4644
Score = 34.7 bits (78), Expect = 0.32
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 24/191 (12%)
Query: 54 EEDEDHLNQSAMKLKET---------RINFKSSETSLEVSEEDKDDIIELVIEDHEHALP 104
EE + HLN K+KET + KS E LEV +D ++ +++D + A
Sbjct: 3193 EEQQMHLNVGLRKIKETVDQVEELRRALRIKSQE--LEVKNAAANDKLKKMVKDQQEAEK 3250
Query: 105 QSAMVVKKTGINFKTSETSLKVS---KEDEDHLNRSAMELKEAGISFKKSKTRSLKDVSF 161
+ M + K E KED D + + +E + A S KK ++ ++
Sbjct: 3251 KKVMSQEIQEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMAN 3310
Query: 162 NRGVLRLPKLVVDDHTECMFLNLIAFELLHVDGTRKEVISFVCFIDTIID-SAVDVAILI 220
++L + C+ L + + + +I FI TI++ SA +++ I
Sbjct: 3311 PPAAVKLAL-----ESICLLLGESTTDWKQI----RSIIMRENFIPTIVNFSAEEISDAI 3361
Query: 221 RSGIIINYLES 231
R + NY+ +
Sbjct: 3362 REKMKKNYMSN 3372
>YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF4631
intergenic region
Length = 203
Score = 34.3 bits (77), Expect = 0.42
Identities = 20/84 (23%), Positives = 44/84 (51%), Gaps = 1/84 (1%)
Query: 8 INFETSETISLEVSEEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDH-LNQSAMK 66
++ ++S ++SL E++++ + + + +F SS + S E SEE+E+ L+ S +
Sbjct: 57 LSLDSSFSLSLSEDEDEDESELEDSFDSSFLVSSFSSSSSSSEEESEEEEEESLDSSFLV 116
Query: 67 LKETRINFKSSETSLEVSEEDKDD 90
++ E E +ED+D+
Sbjct: 117 SASLSLSEDDEEEDSESEDEDEDE 140
Score = 30.4 bits (67), Expect = 6.0
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 9 NFETSETISLEVSEEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLK 68
+F +S + S E SEE+E+ S+ F S ++SL +E+ED ++ + +
Sbjct: 90 SFSSSSSSSEEESEEEEEESLDSS---------FLVSASLSLSEDDEEEDSESEDEDEDE 140
Query: 69 ETRINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAM 108
++ + S S E +ED+D E+ E AL S++
Sbjct: 141 DSDSDSDSDSDSDEDEDEDEDS-----EEEEETALAFSSL 175
>CAGA_HELPY (P55980) Cytotoxicity associated immunodominant antigen
(120 kDa protein) (CAG pathogenicity island protein 26)
Length = 1186
Score = 34.3 bits (77), Expect = 0.42
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 14/151 (9%)
Query: 27 HLNRSAMELKYTGINFKSSETIS--LEVSEEDEDHLNQSAMKLKETRINFKSSETSLEVS 84
+ N++ E K TG N+ + LE S +HL + K E++ K+ + +
Sbjct: 595 NFNKAVAEAKSTG-NYDEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNKNKMEAKAQA 653
Query: 85 EEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLKVSKEDEDHLNRSAMELKEA 144
KD+I L+ ++ A GI + S+ K+SK +LK+
Sbjct: 654 NSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISK-----------DLKDF 702
Query: 145 GISFKKSKTRSLKDVSFNRGVLRLPKLVVDD 175
SF + K KD S L+ K V D
Sbjct: 703 SKSFDEFKNGKNKDFSKAEETLKALKGSVKD 733
>RPC2_CYACA (Q9TM34) DNA-directed RNA polymerase beta'' chain (EC
2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta''
subunit) (RNA polymerase beta'' subunit)
Length = 1269
Score = 33.9 bits (76), Expect = 0.54
Identities = 22/77 (28%), Positives = 37/77 (47%), Gaps = 5/77 (6%)
Query: 3 LKYTGINFETSETISLEVSE-----EDEDHLNRSAMELKYTGINFKSSETISLEVSEEDE 57
LK G F T IS+ + + L + EL+ T I+FK +E ++E S++
Sbjct: 48 LKEIGFGFATKAGISISIEDLKIPPNKSRILQITNQELRKTEISFKRAEITTIEKSQKST 107
Query: 58 DHLNQSAMKLKETRINF 74
D N ++ LK+ I +
Sbjct: 108 DTWNNASEALKDEIIKY 124
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 33.9 bits (76), Expect = 0.54
Identities = 38/143 (26%), Positives = 72/143 (49%), Gaps = 7/143 (4%)
Query: 13 SETISLEVSEEDEDHLNRSAMEL--KYTGINFKSSETISLEVSEEDEDHLNQSAMKLKET 70
SE+ S E EE++ ++S ++ K + K T S E + DE+ +S K K+T
Sbjct: 88 SESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKT 147
Query: 71 RINFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLK-VSKE 129
+ ++S S E SEE++ ++ ++ E ++ + A +++ + K S+ S K + K+
Sbjct: 148 KK--QTSSESSEESEEERK--VKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKK 203
Query: 130 DEDHLNRSAMELKEAGISFKKSK 152
+ + + KE S KKSK
Sbjct: 204 AKSESESESEDEKEVKKSKKKSK 226
Score = 33.5 bits (75), Expect = 0.71
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 19 EVSEEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKETRINFKSSE 78
E EDE + +S KS + + E EDE A + K+T +S
Sbjct: 209 ESESEDEKEVKKSKK---------KSKKVVKKESESEDE------APEKKKTEKRKRSKT 253
Query: 79 TSLEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLKV------------ 126
+S E SE +K D E E + + VKK + ++ E+ ++V
Sbjct: 254 SSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTL 313
Query: 127 ---SKEDEDHLNRSAMELKEAGISFKKSK 152
S++++D + S E +S KK+K
Sbjct: 314 ISDSEDEKDQKSESEASDVEEKVSKKKAK 342
Score = 32.0 bits (71), Expect = 2.1
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Query: 21 SEEDEDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKETRINFKSSETS 80
SEED+D S + SE+ S E S+E+ED + K + + KS +
Sbjct: 64 SEEDDDDEEESPRKSSKKSRKRAKSESESDE-SDEEEDRKKSKSKKKVDQKKKEKSKKKR 122
Query: 81 LEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSET----SLKVSKEDEDHLNR 136
S ED+D E+ E + + KK + + E+ +K SK++++ +
Sbjct: 123 TTSSSEDEDS-----DEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVK 177
Query: 137 SAMELKEAGISFKKSKTRSLK 157
E E +K +S K
Sbjct: 178 KRAETSEESDEDEKPSKKSKK 198
>PCN2_HUMAN (O95613) Pericentrin 2 (Pericentrin B) (Kendrin)
Length = 3336
Score = 33.5 bits (75), Expect = 0.71
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 43 KSSETISLEVSEEDEDHLNQSAMK--LKETRINFKSSETSLEVSEEDKDDIIEL---VIE 97
+++ + LE + + L Q+ +K ++ +I ++ L+ KDD+ ++ +IE
Sbjct: 666 RAARVLGLETEHKVQLSLLQTELKEEIELLKIENRNLYEKLQHETRLKDDLEKVKHNLIE 725
Query: 98 DHEHALPQSAMVVKKTGINFKTSETSLKVSKED-----EDHLNRSAMELKEAGISFKKS 151
DH+ L + + F+ ET KV KE+ E+ L +EL+E S K++
Sbjct: 726 DHQKELNNAKQKTELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQT 784
>MYSJ_DICDI (P54697) Myosin IJ heavy chain
Length = 2245
Score = 33.5 bits (75), Expect = 0.71
Identities = 29/140 (20%), Positives = 61/140 (42%), Gaps = 9/140 (6%)
Query: 17 SLEVSEED----EDHLNRSAMELKYTGINFKSSETISLEVSEEDEDHLNQSAMKLKETRI 72
SL+ E D +D +NR E+K K V++E + Q ++ LKE
Sbjct: 1415 SLKQQERDCQQYKDTINRLENEVKQL-TQLKERFENEFFVAKEQNSNQTQESVYLKEVTT 1473
Query: 73 NFKSSETSLEVSEEDKDDIIELVIEDHEHALPQSAMVVKKTGINFKTSETSLKVSKEDED 132
+ +++ +E E+K I + ++ + Q + ++ + S T L +++ + +
Sbjct: 1474 QMQQNQSRIERELEEKKQHITRIDDERDELKKQLTQLQQQ----HEQSSTQLLLAQNELE 1529
Query: 133 HLNRSAMELKEAGISFKKSK 152
L + ++ KE G K +
Sbjct: 1530 RLRKKELKYKERGHETSKQQ 1549
>MRC1_SCHPO (Q9P7T4) Mediator of replication checkpoint protein 1
(DNA replication checkpoint mediator mrc1)
Length = 1019
Score = 33.5 bits (75), Expect = 0.71
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 20/122 (16%)
Query: 55 EDEDHLNQSAMKLKETRINFKSSETSLEVSEEDKDDIIELVIEDH-----------EHAL 103
+DED+ N KLKE R + +L V E DK +ED + +
Sbjct: 798 DDEDYSNLRREKLKELRRQKLLEDGNLNVLEGDKRKAFLATVEDSLVSSKDNLTWLDATV 857
Query: 104 PQSAMVVKKTGINFKTSETSLKVSKEDEDHLNRSAMELKEAG-------ISFKKSKTRSL 156
S + G + SE SL + E+E+ + E+ +G + KKS TR
Sbjct: 858 EDSGVGSSDLGDEYLYSEQSL--NHEEEEQMEEELSEIFSSGGPNVVDRVYLKKSSTRHT 915
Query: 157 KD 158
D
Sbjct: 916 SD 917
>MIX1_CAEEL (Q09591) Mitotic chromosome and X-chromosome associated
protein mix-1 (Structural maintenance of chromosome 2)
(Protein let-29)
Length = 1244
Score = 33.5 bits (75), Expect = 0.71
Identities = 32/124 (25%), Positives = 58/124 (45%), Gaps = 8/124 (6%)
Query: 42 FKSSETI--SLEVSEEDEDHLNQSAMKLKETRINFKSSETSLEVSEEDKDDIIELVIEDH 99
F++ E + S + E+ + + K + ++ K+ E + EE +DD E
Sbjct: 241 FQTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDLDLKNKEDEKKKMEESRDDQHEEAALSA 300
Query: 100 EHALPQSAMVVKKTGINFKTSETSLKVSKEDEDHLNRSAMELKEAGISFKK----SKTRS 155
H QS M+ K+T + + ET K+ KE E +N+S + +E + +K SK +
Sbjct: 301 AHLSKQSIMLQKET-VKNQLVETINKLKKEGE-QINKSLSKDREVLDAKRKEHEDSKAAN 358
Query: 156 LKDV 159
KD+
Sbjct: 359 SKDI 362
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.132 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,622,208
Number of Sequences: 164201
Number of extensions: 1208500
Number of successful extensions: 5564
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 5481
Number of HSP's gapped (non-prelim): 137
length of query: 315
length of database: 59,974,054
effective HSP length: 110
effective length of query: 205
effective length of database: 41,911,944
effective search space: 8591948520
effective search space used: 8591948520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Medicago: description of AC148403.7