BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148395.10 - phase: 0
(247 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EB2A_BRARE (O73874) Ephrin-B2a precursor 32 1.4
FAT2_DROME (Q9VW71) Putative fat-like cadherin-related tumor sup... 31 3.2
SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1 30 4.1
SYA_DESVH (P61700) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 30 5.4
SYA_AQUPY (Q9XDM3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 29 9.2
SYA_AQUAE (O67323) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 29 9.2
MMS3_MYCTU (P65378) Putative membrane protein MMPS3 29 9.2
MMS3_MYCBO (P65379) Putative membrane protein MMPS3 29 9.2
>EB2A_BRARE (O73874) Ephrin-B2a precursor
Length = 332
Score = 32.0 bits (71), Expect = 1.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 188 VSVAVGVLPSDMSDPQDGELSYMRAHFERVIGSKDSETYYMMMPDGNSNGPE 239
+ + VG PSD P+D SY H + +G KDS++ ++ PD + +G +
Sbjct: 157 IIMKVGQNPSDPISPKDYPTSYPPKHPD--LGGKDSKSNEVLKPDASPHGED 206
>FAT2_DROME (Q9VW71) Putative fat-like cadherin-related tumor
suppressor homolog precursor
Length = 4705
Score = 30.8 bits (68), Expect = 3.2
Identities = 14/59 (23%), Positives = 29/59 (48%)
Query: 176 DDDLYVIQMLHAVSVAVGVLPSDMSDPQDGELSYMRAHFERVIGSKDSETYYMMMPDGN 234
+ D+Y + + S +L + +D G + + + E + G +SE +Y+ + DGN
Sbjct: 2339 ESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGN 2397
>SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1
Length = 1244
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 8 QTMTLPTAQRPPPAITSPKVPMQISLQPANSKSKRSSTNKFFGKFRSMFRSFPIIVPSCK 67
Q LP + P P T+ VP S+ PA S + +S+NK+ + F + + V +C+
Sbjct: 616 QEKELPPIKPPRPTSTT-SVPNTTSVPPAESSNNNNSSNKY--DWFEFFLNCGVDVSNCQ 672
Query: 68 LPTMN 72
T+N
Sbjct: 673 RYTIN 677
>SYA_DESVH (P61700) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 879
Score = 30.0 bits (66), Expect = 5.4
Identities = 35/107 (32%), Positives = 44/107 (40%), Gaps = 6/107 (5%)
Query: 121 PTGKLLQDMGMGLNRIALECEKHSSNDKTKIVDEPIWTLFCNGKKMGYGVKRDPTDDDLY 180
P K D GMGL RI C+ SN T I + I C + Y D TD L
Sbjct: 220 PLPKPSIDTGMGLERITAVCQGVFSNFDTDIF-QAIIQYTCGLANVSYR-SDDETDTALR 277
Query: 181 VI---QMLHAVSVAVGVLPSDMSDPQDGELSYMRAH-FERVIGSKDS 223
VI A + G+LPS+ RA+ F R+IG D+
Sbjct: 278 VIADHSRAIAFMITDGILPSNEGRGYVLRRLIRRAYRFGRLIGLTDT 324
>SYA_AQUPY (Q9XDM3) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 871
Score = 29.3 bits (64), Expect = 9.2
Identities = 34/102 (33%), Positives = 51/102 (49%), Gaps = 11/102 (10%)
Query: 101 NLAFQEDSKCHPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSNDKTKIVDEPI-WTL 159
NL F + ++ +L L P D GMGL RIA + +SN + I+ I +
Sbjct: 195 NLVFMQYNRDENGVLTPLPHPN----IDTGMGLERIASVLQGKNSNFEIDIIYPLIEFGE 250
Query: 160 FCNGKKMGYGVKRDPTDDDLYVI-QMLHAVSVAV--GVLPSD 198
+GKK G ++ TD L VI L A++ A+ GV+PS+
Sbjct: 251 EVSGKKYG---EKFETDVALRVIADHLRAITFAISDGVIPSN 289
>SYA_AQUAE (O67323) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 867
Score = 29.3 bits (64), Expect = 9.2
Identities = 34/102 (33%), Positives = 51/102 (49%), Gaps = 11/102 (10%)
Query: 101 NLAFQEDSKCHPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSNDKTKIVDEPI-WTL 159
NL F + ++ +L L P D GMGL RIA + +SN + I+ I +
Sbjct: 195 NLVFMQYNRDENGVLTPLPHPN----IDTGMGLERIASVLQGKNSNFEIDIIFPLIQFGE 250
Query: 160 FCNGKKMGYGVKRDPTDDDLYVI-QMLHAVSVAV--GVLPSD 198
+GKK G ++ TD L VI L A++ A+ GV+PS+
Sbjct: 251 EVSGKKYG---EKFETDVALRVIADHLRAITFAISDGVIPSN 289
>MMS3_MYCTU (P65378) Putative membrane protein MMPS3
Length = 299
Score = 29.3 bits (64), Expect = 9.2
Identities = 15/39 (38%), Positives = 20/39 (50%), Gaps = 4/39 (10%)
Query: 2 APPHAAQTMTLPTAQRPPPAITSPKVPMQISLQPANSKS 40
APP A T TA PPP T+P P Q++ +K+
Sbjct: 189 APPPATTT----TAAAPPPTTTTPTGPRQVTYSVTGTKA 223
>MMS3_MYCBO (P65379) Putative membrane protein MMPS3
Length = 299
Score = 29.3 bits (64), Expect = 9.2
Identities = 15/39 (38%), Positives = 20/39 (50%), Gaps = 4/39 (10%)
Query: 2 APPHAAQTMTLPTAQRPPPAITSPKVPMQISLQPANSKS 40
APP A T TA PPP T+P P Q++ +K+
Sbjct: 189 APPPATTT----TAAAPPPTTTTPTGPRQVTYSVTGTKA 223
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,831,778
Number of Sequences: 164201
Number of extensions: 1297826
Number of successful extensions: 3146
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3141
Number of HSP's gapped (non-prelim): 11
length of query: 247
length of database: 59,974,054
effective HSP length: 107
effective length of query: 140
effective length of database: 42,404,547
effective search space: 5936636580
effective search space used: 5936636580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC148395.10