BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148342.20 - phase: 0
(129 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UBIQ_ACACA (P49634) Ubiquitin 91 3e-19
UBIQ_SOYBN (P03993) Ubiquitin 90 8e-19
UBIQ_NEUCR (P13117) Ubiquitin 90 8e-19
UBIQ_CHLRE (P14624) Ubiquitin 90 8e-19
UBIQ_ARATH (P59263) Ubiquitin 90 8e-19
UBIQ_ACECL (P42739) Ubiquitin 90 8e-19
UBIQ_YEAST (P61864) Ubiquitin 89 1e-18
UBIQ_CRYNE (P61863) Ubiquitin 89 1e-18
UBIQ_CANAL (P61862) Ubiquitin 89 1e-18
UBIQ_COPCO (P19848) Ubiquitin 89 2e-18
UBIQ_AGLNE (P42740) Ubiquitin 89 2e-18
UBIQ_TRYCR (P08565) Ubiquitin 88 3e-18
UBIQ_GEOCY (P59669) Ubiquitin 88 4e-18
UBIQ_EUPEU (P23324) Ubiquitin 88 4e-18
UBIQ_DICDI (P08618) Ubiquitin 88 4e-18
UBIQ_CAEEL (P14792) Ubiquitin 88 4e-18
UBIQ_PHYIN (P22589) Ubiquitin 87 5e-18
UBIQ_XENLA (P62972) Ubiquitin 87 6e-18
UBIQ_TETPY (P20685) Ubiquitin 87 6e-18
UBIQ_STRPU (P23398) Ubiquitin 87 6e-18
>UBIQ_ACACA (P49634) Ubiquitin
Length = 76
Score = 91.3 bits (225), Expect = 3e-19
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_SOYBN (P03993) Ubiquitin
Length = 76
Score = 90.1 bits (222), Expect = 8e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_NEUCR (P13117) Ubiquitin
Length = 76
Score = 90.1 bits (222), Expect = 8e-19
Identities = 48/75 (64%), Positives = 56/75 (74%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK+ I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_CHLRE (P14624) Ubiquitin
Length = 76
Score = 90.1 bits (222), Expect = 8e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_ARATH (P59263) Ubiquitin
Length = 76
Score = 90.1 bits (222), Expect = 8e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_ACECL (P42739) Ubiquitin
Length = 76
Score = 90.1 bits (222), Expect = 8e-19
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS + VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_YEAST (P61864) Ubiquitin
Length = 76
Score = 89.4 bits (220), Expect = 1e-18
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_CRYNE (P61863) Ubiquitin
Length = 76
Score = 89.4 bits (220), Expect = 1e-18
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_CANAL (P61862) Ubiquitin
Length = 76
Score = 89.4 bits (220), Expect = 1e-18
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_COPCO (P19848) Ubiquitin
Length = 76
Score = 89.0 bits (219), Expect = 2e-18
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_AGLNE (P42740) Ubiquitin
Length = 76
Score = 89.0 bits (219), Expect = 2e-18
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_TRYCR (P08565) Ubiquitin
Length = 76
Score = 88.2 bits (217), Expect = 3e-18
Identities = 48/75 (64%), Positives = 54/75 (72%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT L+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_GEOCY (P59669) Ubiquitin
Length = 76
Score = 87.8 bits (216), Expect = 4e-18
Identities = 47/75 (62%), Positives = 55/75 (72%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V++S I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_EUPEU (P23324) Ubiquitin
Length = 76
Score = 87.8 bits (216), Expect = 4e-18
Identities = 48/75 (64%), Positives = 53/75 (70%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL V+ S I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_DICDI (P08618) Ubiquitin
Length = 76
Score = 87.8 bits (216), Expect = 4e-18
Identities = 47/75 (62%), Positives = 54/75 (71%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+ S I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_CAEEL (P14792) Ubiquitin
Length = 76
Score = 87.8 bits (216), Expect = 4e-18
Identities = 47/75 (62%), Positives = 55/75 (72%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V++S I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_PHYIN (P22589) Ubiquitin
Length = 76
Score = 87.4 bits (215), Expect = 5e-18
Identities = 47/75 (62%), Positives = 54/75 (71%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL V+ S I VK+ I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_XENLA (P62972) Ubiquitin
Length = 76
Score = 87.0 bits (214), Expect = 6e-18
Identities = 47/75 (62%), Positives = 54/75 (71%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+ S I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_TETPY (P20685) Ubiquitin
Length = 76
Score = 87.0 bits (214), Expect = 6e-18
Identities = 47/75 (62%), Positives = 54/75 (71%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL V++S I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>UBIQ_STRPU (P23398) Ubiquitin
Length = 76
Score = 87.0 bits (214), Expect = 6e-18
Identities = 47/75 (62%), Positives = 54/75 (71%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+ S I VK I + +GIP QRLIFA QL+ RTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.330 0.145 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,081,723
Number of Sequences: 164201
Number of extensions: 411141
Number of successful extensions: 1616
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1517
Number of HSP's gapped (non-prelim): 113
length of query: 129
length of database: 59,974,054
effective HSP length: 105
effective length of query: 24
effective length of database: 42,732,949
effective search space: 1025590776
effective search space used: 1025590776
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC148342.20