BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148292.5 + phase: 0 /pseudo
(1454 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CYB_PHOLR (Q35505) Cytochrome b 36 0.88
CYB_MUSPU (Q35065) Cytochrome b 35 1.1
CYB_LUTLU (Q34900) Cytochrome b 35 1.1
CYB_HALGR (P38593) Cytochrome b 35 1.1
CYB_AEPME (Q9T9A5) Cytochrome b 35 1.1
R1AB_CVBQ (Q8V6W7) Replicase polyprotein 1ab (pp1ab) (ORF1ab pol... 35 1.5
R1AB_CVBLU (Q8V439) Replicase polyprotein 1ab (pp1ab) (ORF1ab po... 35 1.5
R1AB_CVBEN (Q91A29) Replicase polyprotein 1ab (pp1ab) (ORF1ab po... 35 1.5
NU5M_RHISA (Q9ZYM7) NADH-ubiquinone oxidoreductase chain 5 (EC 1... 35 1.5
NU4M_ACACA (Q37375) NADH-ubiquinone oxidoreductase chain 4 (EC 1... 35 2.0
CYB_TALAL (Q9MQY5) Cytochrome b 35 2.0
CYB_PHOHI (Q35468) Cytochrome b 35 2.0
CYB_MUSSB (Q9MJ99) Cytochrome b 35 2.0
CYB_PHOVI (Q00530) Cytochrome b 34 2.6
CYB_MARPE (O78936) Cytochrome b 34 2.6
CYB_CAMBA (Q34028) Cytochrome b 34 2.6
CYB_AONCA (O78927) Cytochrome b 34 2.6
CYB_TALEU (Q9MQY6) Cytochrome b 34 3.3
CYB_HORSE (P48665) Cytochrome b 34 3.3
CYB_GULGU (P56697) Cytochrome b 34 3.3
>CYB_PHOLR (Q35505) Cytochrome b
Length = 379
Score = 35.8 bits (81), Expect = 0.88
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L+L +L + ++ S LL P + +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDP-DNYIPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L L++ ++I +++P L IS CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRGMMFRPISQCLFWLLVADLLTL 335
>CYB_MUSPU (Q35065) Cytochrome b
Length = 379
Score = 35.4 bits (80), Expect = 1.1
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L+L +L + ++ S LL P + +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGALLLILMLTLLVLFSPDLLGDP-DNYIPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L LI ++I ++IP L +S CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTL 335
>CYB_LUTLU (Q34900) Cytochrome b
Length = 379
Score = 35.4 bits (80), Expect = 1.1
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L+L +L M ++ S LL P +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGALLLALMLMMLVLFSPDLLGDP-DNYTPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L L++ ++I ++IP L +S CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTL 335
>CYB_HALGR (P38593) Cytochrome b
Length = 379
Score = 35.4 bits (80), Expect = 1.1
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L+L +L + ++ S LL P + +PL P IK
Sbjct: 218 IPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDP-DNYIPANPLSTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L L++ ++I +++P L IS CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRGMMFRPISQCLFWLLVADLLTL 335
>CYB_AEPME (Q9T9A5) Cytochrome b
Length = 379
Score = 35.4 bits (80), Expect = 1.1
Identities = 30/127 (23%), Positives = 60/127 (46%), Gaps = 14/127 (11%)
Query: 836 VLIGNISLPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIK 895
+L + +PFHP+ + + ++ ++L L+ M L+L + LL + +PL+ P IK
Sbjct: 211 ILSDSDKIPFHPYYT-IXDILGILLMILVLMLLVLFMPDLLGDPDXXIPANPLNTPPHIK 269
Query: 896 SLLLI*RIIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLI 943
+ ++ + + L L++ ++I +L+P L IS CLF ++
Sbjct: 270 PEWYF-LXAYAILRSIPNKLGGVLALVLSILILALMPMLHXSKQRSMMFRPISQCLFWIL 328
Query: 944 MNPKPTL 950
+ TL
Sbjct: 329 VADLXTL 335
>R1AB_CVBQ (Q8V6W7) Replicase polyprotein 1ab (pp1ab) (ORF1ab
polyprotein) [Includes: Replicase polyprotein 1a (pp1a)
(ORF1a)] [Contains: p28; p65; p210 (EC 3.4.24.-)
(Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide
HD2 (p44); 3C-like proteinase (
Length = 7059
Score = 35.0 bits (79), Expect = 1.5
Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 383 CLFGS*IQALMIMYVFQNLISLLFTKSNLCLL-LFPMVIPYMFIMLVMYILLLICT*IMF 441
C+ + ++ M MYV N++S+ F LC++ L +++ + + L MYI+ ++ T +
Sbjct: 3572 CIITAFVKWTMFMYVTTNMLSITFCA--LCVISLAMLLVKHKHLYLTMYIIPVLFTLLYN 3629
Query: 442 CILLNSKST*FLFPKCVIPYLVVAISFRI--NVLYRM*HHIR*LVWVINQMVSTHCLCSF 499
L+ K T + + Y V ++ + V+Y M I +V+V + ++ H L SF
Sbjct: 3630 NYLVVYKQTFRGYVYAWLSYYVPSVEYTYTDEVIYGMLLLIG-MVFVTLRSIN-HDLFSF 3687
Query: 500 LIRRCILIAVLSLYQIKWHIVLVLFLILVLL 530
++ +I+V+SL+ + ++ + L+L L
Sbjct: 3688 IMFVGRVISVVSLWYMGSNLEEEILLMLASL 3718
>R1AB_CVBLU (Q8V439) Replicase polyprotein 1ab (pp1ab) (ORF1ab
polyprotein) [Includes: Replicase polyprotein 1a (pp1a)
(ORF1a)] [Contains: p28; p65; p210 (EC 3.4.24.-)
(Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide
HD2 (p44); 3C-like proteinase
Length = 7094
Score = 35.0 bits (79), Expect = 1.5
Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 383 CLFGS*IQALMIMYVFQNLISLLFTKSNLCLL-LFPMVIPYMFIMLVMYILLLICT*IMF 441
C+ + ++ M MYV N++S+ F LC++ L +++ + + L MYI+ ++ T +
Sbjct: 3572 CIITAFVKWTMFMYVTTNMLSITFCA--LCVISLAMLLVKHKHLYLTMYIIPVLFTLLYN 3629
Query: 442 CILLNSKST*FLFPKCVIPYLVVAISFRI--NVLYRM*HHIR*LVWVINQMVSTHCLCSF 499
L+ K T + + Y V ++ + V+Y M I +V+V + ++ H L SF
Sbjct: 3630 NYLVVYKQTFRGYVYAWLSYYVPSVEYTYTDEVIYGMLLLIG-MVFVTLRSIN-HDLFSF 3687
Query: 500 LIRRCILIAVLSLYQIKWHIVLVLFLILVLL 530
++ +I+V+SL+ + ++ + L+L L
Sbjct: 3688 IMFVGRVISVVSLWYMGSNLEEEILLMLASL 3718
>R1AB_CVBEN (Q91A29) Replicase polyprotein 1ab (pp1ab) (ORF1ab
polyprotein) [Includes: Replicase polyprotein 1a (pp1a)
(ORF1a)] [Contains: p28; p65; p210 (EC 3.4.24.-)
(Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide
HD2 (p44); 3C-like proteinase
Length = 7094
Score = 35.0 bits (79), Expect = 1.5
Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 383 CLFGS*IQALMIMYVFQNLISLLFTKSNLCLL-LFPMVIPYMFIMLVMYILLLICT*IMF 441
C+ + ++ M MYV N++S+ F LC++ L +++ + + L MYI+ ++ T +
Sbjct: 3572 CIITAFVKWTMFMYVTTNMLSITFCA--LCVISLAMLLVKHKHLYLTMYIIPVLFTLLYN 3629
Query: 442 CILLNSKST*FLFPKCVIPYLVVAISFRI--NVLYRM*HHIR*LVWVINQMVSTHCLCSF 499
L+ K T + + Y V ++ + V+Y M I +V+V + ++ H L SF
Sbjct: 3630 NYLVVYKQTFRGYVYAWLSYYVPSVEYTYTDEVIYGMLLLIG-MVFVTLRSIN-HDLFSF 3687
Query: 500 LIRRCILIAVLSLYQIKWHIVLVLFLILVLL 530
++ +I+V+SL+ + ++ + L+L L
Sbjct: 3688 IMFVGRVISVVSLWYMGSNLEEEILLMLASL 3718
>NU5M_RHISA (Q9ZYM7) NADH-ubiquinone oxidoreductase chain 5 (EC
1.6.5.3)
Length = 552
Score = 35.0 bits (79), Expect = 1.5
Identities = 93/472 (19%), Positives = 183/472 (38%), Gaps = 86/472 (18%)
Query: 569 LLLIIKLHVMFVILPDIRNCPFPIVLLMLA-----------------VNFSYFILIFGDP 611
L+ I+ F IL D +C F +LM++ +F + +L+F
Sbjct: 36 LMSILSFEYKFYILLDWMSCMFSFTVLMISSMVLWYSHSYMSSDKNKTSFCWMVLMFILS 95
Query: 612 LLLILFMVTNIFSP*LMITLDF----CESYCL----KPKQKFLCTLKTSLS*LRINFMLH 663
+LL++ M N+F M+ L + SYCL + + + T +S + M+
Sbjct: 96 MLLLVLM-PNVF----MLILGWDGLGLTSYCLVIFYQSSNSYNSGMMTIISNRVGDVMVI 150
Query: 664 LKSSELIMVLNFSSMNFMPLKVF--------CIKGLVLKPPNKMEEWKESINTY*T*AEP 715
+ +I +NF+S +K F I GL W + T
Sbjct: 151 MM---IIFAINFNSFELTSIKSFELIWGLLIIIAGLTKSAQIPFSAWLPAAMAAPTPVSA 207
Query: 716 YYISQNYLYLFGHMLSYMLSFSSIEYLHLFCTIFLLTIYFMTVHQISLL------LRSLV 769
S + ++L + F + ++F + FL+ I MT+ + L+ ++
Sbjct: 208 LVHSSTLVTAGVYLL---IRFDLLFNNNIF-SAFLMKISLMTMIMSGMNAFFENDLKKII 263
Query: 770 VFAMLHPFKV--TELNLKLEPESQFS*DTS*VSKAMFYMI--YILERSSYLDMLFFMNVF 825
F+ L + L+L L S F + K+M ++ +++ + F++ F
Sbjct: 264 AFSTLSQLSIMMLTLSLSLTNLSFFHLIVHAIFKSMLFLCAGFVIHNLMGNQDIRFLSDF 323
Query: 826 YHINPFPHLRVLIGNISLPFHPFLS------------FL---------LFLISLILHQLL 864
+ +P ++IG SL PF+ FL +F++ +I L
Sbjct: 324 FKFSPLILSCMMIGMFSLMGFPFIGGFYSKDVIMEFFFLKSNNMIEMNMFIVGIIFTFLY 383
Query: 865 NMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*RIIFVLINHLHLSITCTLFLIMF 924
N F + + LL L ++ +++ L + ++ ++L + + ++F
Sbjct: 384 N-FRLFYMLLLKGTLFNMMSKDSINIFMNYPIFNL--TVYLLITSNLMSWLLLPEYTMIF 440
Query: 925 LIITS--LIPTLISFCLFMLIMNPK-----PTLRQTSLNVGGKLCKLSSLLL 969
L T ++ L+ FC FM ++ K P L+ L L +L+S ++
Sbjct: 441 LSFTQKLMLLFLVPFCTFMFMILLKFIKFFPYLKLNFLMTMWNLSELTSFIM 492
>NU4M_ACACA (Q37375) NADH-ubiquinone oxidoreductase chain 4 (EC
1.6.5.3)
Length = 497
Score = 34.7 bits (78), Expect = 2.0
Identities = 53/206 (25%), Positives = 88/206 (41%), Gaps = 27/206 (13%)
Query: 346 LLLFLLQINSPLHHPCLLFLISQVYKVLSHALFISILCLFGS*IQALMIMY--VFQNLIS 403
LL + L I+ L LL + VY I LF S Q ++I++ + + IS
Sbjct: 4 LLYYTLFISFMLWLAALLIISFSVYGSPEKVKLIKKTSLFFSFFQFILIIFFWILSDNIS 63
Query: 404 LLFTKSNLCLLLFPMVIPYMFIMLVMYILLLICT*IMFCILLNSKST*FLFPKCVIPYLV 463
+L + + F ++F+ Y++ + ++F +L T FL P C++
Sbjct: 64 VL---AEFDIYNFQFYKQWLFLYNFHYVIGMDNISLLFLLL-----TFFLTPICIL---- 111
Query: 464 VAISFRINVLYRM*HHIR*LVWVINQMVSTHCLC----------SFLIRRCILIAVLSLY 513
IS+ ++ YR I L+++ + + C+ S LI ILI V
Sbjct: 112 --ISWN-SIKYRYNSFIICLIFITFILFNIFCVLDLVFFYIFFESILIPMFILIGVWGSR 168
Query: 514 QIKWHIVLVLFLILVLLSLKLCLIVL 539
Q K H V LF +L SL + L +L
Sbjct: 169 QRKIHAVYQLFFYTLLGSLLMLLGIL 194
>CYB_TALAL (Q9MQY5) Cytochrome b
Length = 379
Score = 34.7 bits (78), Expect = 2.0
Identities = 44/174 (25%), Positives = 77/174 (43%), Gaps = 25/174 (14%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L L+L +L++ ++ S LL P +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGMLVLILMLSLLVLFSPDLLGDP-DNYTPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L L+ ++I +LIP L +S CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALVFSILILALIPFLHTSKQRSMMFRPMSQCLFWLLVADLLTL 335
Query: 951 RQTSLNVGGKLCKLSSLLLKILELGR*LIHLLMLNL*AVGGFTRLSIMQMTLLK 1004
+GG+ + + I +L L LL+L L S+M+ ++LK
Sbjct: 336 TW----IGGQ--PVEHPFITIGQLASILYFLLILVL-----MPLTSLMENSMLK 378
>CYB_PHOHI (Q35468) Cytochrome b
Length = 379
Score = 34.7 bits (78), Expect = 2.0
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L+L +L + ++ S LL P + +PL P IK
Sbjct: 218 IPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDP-DNYIPANPLSTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L L++ ++I +++P L IS CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALVLSILILAIMPLLHTSKQRGMMFRPISQCLFWLLVADLLTL 335
>CYB_MUSSB (Q9MJ99) Cytochrome b
Length = 379
Score = 34.7 bits (78), Expect = 2.0
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L+L +L + ++ S LL P + +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGALLLILMLMLLVLFSPDLLGDP-DNYIPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L LI ++I ++IP L +S CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTL 335
>CYB_PHOVI (Q00530) Cytochrome b
Length = 379
Score = 34.3 bits (77), Expect = 2.6
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 836 VLIGNISLPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIK 895
++ + +PFHP+ + L +L+L +L + ++ S LL P + +PL P IK
Sbjct: 211 IMSNSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDP-DNYIPANPLSTPPHIK 269
Query: 896 SLLLI*RIIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLI 943
+ ++ + + L L++ ++I +++P L IS CLF +
Sbjct: 270 PEWYF-LFAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRGMMFRPISQCLFWFL 328
Query: 944 MNPKPTL 950
+ TL
Sbjct: 329 VADLLTL 335
>CYB_MARPE (O78936) Cytochrome b
Length = 379
Score = 34.3 bits (77), Expect = 2.6
Identities = 32/120 (26%), Positives = 53/120 (43%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L L L +L M ++ S LL P + +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGGLFLVLVLMMLVLFSPDLLGDP-DNYIPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L LI ++I ++IP L +S CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTL 335
>CYB_CAMBA (Q34028) Cytochrome b
Length = 379
Score = 34.3 bits (77), Expect = 2.6
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L+L +L + ++ S LL P +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGALLLMLILLILVLFSPDLLGDP-DNYTPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L LI+ ++I +LIP L IS CLF +++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALILSILILALIPMLHTSKQRSMMFRPISQCLFWVLVADLLTL 335
>CYB_AONCA (O78927) Cytochrome b
Length = 379
Score = 34.3 bits (77), Expect = 2.6
Identities = 45/174 (25%), Positives = 76/174 (42%), Gaps = 25/174 (14%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L L +L M ++ S LL P +PL P IK
Sbjct: 218 IPFHPYYTIKDILGALSLALVLMMLVLFSPDLLGDP-DNYTPANPLSTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L LI+ ++I ++IP L +S CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTL 335
Query: 951 RQTSLNVGGKLCKLSSLLLKILELGR*LIHLLMLNL*AVGGFTRLSIMQMTLLK 1004
+GG+ + + I +L L +L+L L + SI++ LLK
Sbjct: 336 TW----IGGQ--PVEHPFITIGQLASILYFMLLLVLMPIA-----SIIENNLLK 378
>CYB_TALEU (Q9MQY6) Cytochrome b
Length = 379
Score = 33.9 bits (76), Expect = 3.3
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +LIL L+ ++ S LL P + +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGALILIMALSSLVLFSPDLLGDP-DNYIPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIM 944
+ ++ + + L L+ +++ +L+P L IS CLF L++
Sbjct: 276 FAYAILRSIPNKLGGVLALVFSILVLALMPFLHTSKQRSMMFRPISQCLFWLLV 329
>CYB_HORSE (P48665) Cytochrome b
Length = 379
Score = 33.9 bits (76), Expect = 3.3
Identities = 33/120 (27%), Positives = 53/120 (43%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L L+L LL ++ S LL P +PL P IK
Sbjct: 218 IPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDP-DNYTPANPLSTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L LI+ ++I +LIPTL +S C+F L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTL 335
>CYB_GULGU (P56697) Cytochrome b
Length = 379
Score = 33.9 bits (76), Expect = 3.3
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 843 LPFHPFLSFLLFLISLILHQLLNMFLILSLQLLLHPLMTLLVLHPLDVLPEIKSLLLI*R 902
+PFHP+ + L +L L +L M ++ S LL P +PL+ P IK
Sbjct: 218 IPFHPYYTIKDILGALFLALVLMMLVLFSPDLLGDP-DNYTPANPLNTPPHIKPEWYF-L 275
Query: 903 IIFVLINHLHLSITCTLFLIMFLIITSLIPTL------------ISFCLFMLIMNPKPTL 950
+ ++ + + L L++ +++ ++IP L +S CLF L++ TL
Sbjct: 276 FAYAILRSIPNKLGGVLALVLSILVLAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTL 335
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.352 0.158 0.526
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,640,855
Number of Sequences: 164201
Number of extensions: 5298854
Number of successful extensions: 19778
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 19736
Number of HSP's gapped (non-prelim): 93
length of query: 1454
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1331
effective length of database: 39,777,331
effective search space: 52943627561
effective search space used: 52943627561
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (22.0 bits)
S2: 72 (32.3 bits)
Medicago: description of AC148292.5