BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148289.14 - phase: 0
(497 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SYA_AQUPY (Q9XDM3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 35 0.34
MUKB_PASMU (Q9CN36) Chromosome partition protein mukB (Structura... 33 1.7
UTRO_HUMAN (P46939) Utrophin (Dystrophin-related protein 1) (DRP... 33 2.2
MUS2_AQUAE (O67287) MutS2 protein 33 2.2
EVPL_HUMAN (Q92817) Envoplakin (210 kDa paraneoplastic pemphigus... 33 2.2
FHL1_YEAST (P39521) Pre-rRNA processing protein FHL1 32 3.8
MUKB_ACTAC (Q93IE8) Chromosome partition protein mukB (Structura... 31 6.5
GABB_HUMAN (Q06547) GA binding protein beta chain (GABP-beta-2 s... 31 6.5
C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 1... 31 6.5
BGAL_LACDE (P20043) Beta-galactosidase (EC 3.2.1.23) (Lactase) 31 6.5
YK91_VIBVU (P59353) Hypothetical UPF0229 protein VV12091 31 8.4
TPM_DERPT (O18416) Tropomyosin (Allergen Der p 10) 31 8.4
TPM2_YEAST (P40414) Tropomyosin 2 31 8.4
TORS_ECO57 (P58356) Sensor protein torS (EC 2.7.3.-) 31 8.4
CENF_HUMAN (P49454) CENP-F kinetochore protein (Centromere prote... 31 8.4
>SYA_AQUPY (Q9XDM3) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 871
Score = 35.4 bits (80), Expect = 0.34
Identities = 15/43 (34%), Positives = 29/43 (66%)
Query: 432 KYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQSTR 474
K DE + KVE + +I+++E E+ KLR++I+K ++ + + R
Sbjct: 719 KEDEVVQKVEELKEEIKEKEKEIQKLRQEILKLQIREKVKEER 761
>MUKB_PASMU (Q9CN36) Chromosome partition protein mukB (Structural
maintenance of chromosome related protein)
Length = 1495
Score = 33.1 bits (74), Expect = 1.7
Identities = 23/73 (31%), Positives = 36/73 (48%), Gaps = 7/73 (9%)
Query: 416 QEKLARSECVSATWKRKYDEAMLKVETISG-------KIEQQEHEVHKLRRQIVKKNVQI 468
QEK+AR + A + +E + VET + ++EQ E EV ++R Q+ +
Sbjct: 372 QEKIARYQDDVAEITARLEEQKMVVETATEQLEESQVQVEQVEQEVDQIRAQLADYQQAL 431
Query: 469 RAQSTRLSQFISA 481
AQ TR Q+ A
Sbjct: 432 DAQQTRALQYQQA 444
>UTRO_HUMAN (P46939) Utrophin (Dystrophin-related protein 1) (DRP1)
(DRP)
Length = 3433
Score = 32.7 bits (73), Expect = 2.2
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 417 EKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQSTRLS 476
++L +C+ W + +EA+ KV+T + K +Q+E V R I+K++++++ Q+ L
Sbjct: 532 QELLEEQCLLKAWLTEKEEALNKVQTSNFK-DQKELSVSVRRLAILKEDMEMKRQT--LD 588
Query: 477 QFISAG-------ERWEFFKDAHSDSDE 497
Q G + + K +SDS+E
Sbjct: 589 QLSEIGQDVGQLLDNSKASKKINSDSEE 616
>MUS2_AQUAE (O67287) MutS2 protein
Length = 762
Score = 32.7 bits (73), Expect = 2.2
Identities = 15/60 (25%), Positives = 35/60 (58%)
Query: 401 PAPALPLAPATVEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQ 460
P+ + +A V E E+ ++ + + +KY+E K+E + ++++++ EV KLR++
Sbjct: 495 PSEVIEIAKRHVGEFGEQYIKAMEKLSDYVKKYEEEFRKLEELRKELQKEKEEVEKLRKE 554
>EVPL_HUMAN (Q92817) Envoplakin (210 kDa paraneoplastic pemphigus
antigen) (p210) (210 kDa cornified envelope precursor)
Length = 2033
Score = 32.7 bits (73), Expect = 2.2
Identities = 16/62 (25%), Positives = 33/62 (52%)
Query: 416 QEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQSTRL 475
+E++ R+E + TW R+ E + + + + E+ L RQ ++ +Q++ +S L
Sbjct: 1561 RERIDRAETLGRTWSREESELQRARDQADQECGRLQQELRALERQKQQQTLQLQEESKLL 1620
Query: 476 SQ 477
SQ
Sbjct: 1621 SQ 1622
>FHL1_YEAST (P39521) Pre-rRNA processing protein FHL1
Length = 936
Score = 32.0 bits (71), Expect = 3.8
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 430 KRKYDEAMLKVETISGKIEQQEHEVHKL----RRQIVKKNVQIRAQSTRLSQFISAGERW 485
K++ + A+ K + K+EQQ+H++ ++ ++ IV + + A+ +SQ ++A
Sbjct: 547 KKQSEIAVAKAQAAQLKLEQQQHKLQQVPQRGKKDIVSQRSNVNARKQNISQTLAANRAA 606
Query: 486 EFFKDAHSDS 495
K+ SD+
Sbjct: 607 SNRKNTASDN 616
>MUKB_ACTAC (Q93IE8) Chromosome partition protein mukB (Structural
maintenance of chromosome related protein)
Length = 1496
Score = 31.2 bits (69), Expect = 6.5
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 416 QEKLARSECVSATWKRKYDEAMLKVETISGKI-------EQQEHEVHKLRRQIVKKNVQI 468
QEK++R + + +E + VET + ++ EQ E EV LR Q+ +
Sbjct: 373 QEKISRYQENVGELTERLEEQKMVVETANEQLEESQAQFEQTEQEVDNLRSQLADYQQAL 432
Query: 469 RAQSTRLSQFISA 481
AQ TR Q+ A
Sbjct: 433 DAQQTRALQYQQA 445
>GABB_HUMAN (Q06547) GA binding protein beta chain (GABP-beta-2
subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1)
(Transcription factor E4TF1-53) (Transcription factor
E4TF1-47) (Nuclear respiratory factor-2)
Length = 395
Score = 31.2 bits (69), Expect = 6.5
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 403 PALPLAPATVEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIV 462
PA +A TV +E A+ +C+ R + + E + ++++ E K R+Q++
Sbjct: 311 PATDIAEETVIS-EEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANREAQKYRQQLL 369
Query: 463 KKNVQIRAQSTRL 475
KK + A +L
Sbjct: 370 KKEQEAEAYRQKL 382
>C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)
(Microtubule binding protein 190) (d-CLIP-190)
Length = 1690
Score = 31.2 bits (69), Expect = 6.5
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 413 EECQEKLARSECV-------SATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKN 465
EE +EKL +++ S T K K E ++ + ++Q+E V L ++ + +
Sbjct: 1192 EELEEKLKQAQQSEQKLQQESQTSKEKLTEIQQSLQELQDSVKQKEELVQNLEEKVRESS 1251
Query: 466 VQIRAQSTRLSQ 477
I AQ+T+L++
Sbjct: 1252 SIIEAQNTKLNE 1263
>BGAL_LACDE (P20043) Beta-galactosidase (EC 3.2.1.23) (Lactase)
Length = 1006
Score = 31.2 bits (69), Expect = 6.5
Identities = 31/112 (27%), Positives = 46/112 (40%), Gaps = 8/112 (7%)
Query: 105 EYSHLIGLPVLDKVPFTGLEPFPKAATIANALHLKTSLIKE-KLTLKGNLPSLPTKF--- 160
EY+H +G V D +T LE +P + L K+ L G+ PT +
Sbjct: 531 EYAHAMGNSVGDLAAYTALEKYPHYQGGFIWDWIDQGLEKDGHLLYGGDFDDRPTDYEFC 590
Query: 161 ----LYQQASEFSKTNNVEAFYSILALLIYGLVLFPNIDNYVDIHAIQIFLT 208
++ +E K NV+A Y+ L L + LF DN + FLT
Sbjct: 591 GNGLVFADRTESPKLANVKALYANLKLEVKDGQLFLKNDNLFTNSSSYYFLT 642
>YK91_VIBVU (P59353) Hypothetical UPF0229 protein VV12091
Length = 423
Score = 30.8 bits (68), Expect = 8.4
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 405 LPLAPATVEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVK 463
+P + V Q+ LAR +SA KR E L++E I + Q+ E KL+++I +
Sbjct: 160 MPSNISIVRSLQQSLARRTAMSAGKKRLLHELELELERIQNQEPAQKLEEMKLKQEIAE 218
>TPM_DERPT (O18416) Tropomyosin (Allergen Der p 10)
Length = 284
Score = 30.8 bits (68), Expect = 8.4
Identities = 17/81 (20%), Positives = 36/81 (43%)
Query: 412 VEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQ 471
+E + +L + ++ RKYDE K+ + +E+ E +IV+ ++R
Sbjct: 141 MEGLENQLKEARMMAEDADRKYDEVARKLAMVEADLERAEERAETGESKIVELEEELRVV 200
Query: 472 STRLSQFISAGERWEFFKDAH 492
L + E+ + ++AH
Sbjct: 201 GNNLKSLEVSEEKAQQREEAH 221
>TPM2_YEAST (P40414) Tropomyosin 2
Length = 161
Score = 30.8 bits (68), Expect = 8.4
Identities = 16/69 (23%), Positives = 38/69 (54%), Gaps = 4/69 (5%)
Query: 412 VEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQ 471
+E+ +EKL + S +W+ KY+E +++ + ++E+E+ + + KN Q+ ++
Sbjct: 1 MEKIKEKLNSLKLESESWQEKYEELREQLKELEQSNTEKENEI----KSLSAKNEQLDSE 56
Query: 472 STRLSQFIS 480
+L +S
Sbjct: 57 VEKLESQLS 65
>TORS_ECO57 (P58356) Sensor protein torS (EC 2.7.3.-)
Length = 914
Score = 30.8 bits (68), Expect = 8.4
Identities = 18/38 (47%), Positives = 24/38 (62%), Gaps = 3/38 (7%)
Query: 447 IEQQEHEVHKLRRQ---IVKKNVQIRAQSTRLSQFISA 481
IEQQE E+ + RQ +V + +Q+R Q RLSQ I A
Sbjct: 109 IEQQEQEISRSLRQQGELVGRRLQLRQQQQRLSQQIVA 146
>CENF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F)
(Mitosin) (AH antigen)
Length = 3210
Score = 30.8 bits (68), Expect = 8.4
Identities = 16/62 (25%), Positives = 31/62 (49%)
Query: 413 EECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQS 472
E Q +L+ S+ + + A+++ + ++ + EVH+LRR I K V+I A
Sbjct: 2169 ESLQARLSESDYEKLNVSKALEAALVEKGEFALRLSSTQEEVHQLRRGIEKLRVRIEADE 2228
Query: 473 TR 474
+
Sbjct: 2229 KK 2230
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,766,308
Number of Sequences: 164201
Number of extensions: 2624169
Number of successful extensions: 6417
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6401
Number of HSP's gapped (non-prelim): 24
length of query: 497
length of database: 59,974,054
effective HSP length: 114
effective length of query: 383
effective length of database: 41,255,140
effective search space: 15800718620
effective search space used: 15800718620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148289.14