BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148289.12 - phase: 0
(214 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, ch... 355 3e-98
PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, ch... 349 2e-96
PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, ch... 344 1e-94
PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, ch... 300 1e-81
PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PS... 151 1e-36
PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PS... 150 2e-36
PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PS... 148 8e-36
PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PS... 145 5e-35
PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PS... 145 5e-35
PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PS... 145 9e-35
PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PS... 143 3e-34
PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PS... 142 4e-34
PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PS... 140 2e-33
PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PS... 137 1e-32
PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PS... 129 7e-30
PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PS... 110 2e-24
PSAL_ANAVA (P31092) Photosystem I reaction center subunit XI (PS... 49 9e-06
PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PS... 31 2.5
YHDP_ECOLI (P46474) Hypothetical protein yhdP precursor 29 7.1
YCBT_BACSU (P42252) Hypothetical protein ycbT 29 7.1
>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI,
chloroplast precursor (PSI-L) (PSI subunit V)
Length = 219
Score = 355 bits (912), Expect = 3e-98
Identities = 174/218 (79%), Positives = 197/218 (89%), Gaps = 6/218 (2%)
Query: 2 AAASPMASQLKSSFT-----RPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQV 56
A+ASPMASQL+SSF+ + L P+G+ G+ P P++R +FTV+A++S+K +QV
Sbjct: 3 ASASPMASQLRSSFSSASLSQRLAVPKGISGA-PFGVSPTKRVSSFTVRAVKSDKTTFQV 61
Query: 57 IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
+QPINGDPFIGSLETPVTSSPL+AWYLSNLPGYRTAVNPLLRG+EVGLAHGFFLVGPFVK
Sbjct: 62 VQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVK 121
Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
AGPLRNT YAGSAGSLAAAGL+VILS+CLTIYG+SSF EG+PSIAPSLTLTGRKKQPD L
Sbjct: 122 AGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQL 181
Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
QTADGW+KFTGGFFFGGISGVTWAYFLLYVLDLPYFVK
Sbjct: 182 QTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219
>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI,
chloroplast precursor (PSI-L) (PSI subunit V)
Length = 217
Score = 349 bits (896), Expect = 2e-96
Identities = 172/216 (79%), Positives = 194/216 (89%), Gaps = 6/216 (2%)
Query: 3 AASPMASQLKSSF----TRPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQVIQ 58
A SP ASQL SSF TR L++P+GL +SPL ++P+R +FT++AIQ++KP +QVIQ
Sbjct: 4 ATSPTASQLSSSFASSNTRALISPKGL-SASPLRRIPTRTH-SFTIRAIQADKPTFQVIQ 61
Query: 59 PINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAG 118
PINGDPFIGSLETPVTSSPL+AWYLSNLP YRTAV+PLLRGIEVGLAHGFFLVGPFVKAG
Sbjct: 62 PINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAG 121
Query: 119 PLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQT 178
PLRNT YAG AGSLAA GLIVILS+CLT+YGV+SFNEG+PS APSLTLTGRKK PDPLQT
Sbjct: 122 PLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQT 181
Query: 179 ADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
ADGW+KF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 182 ADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI,
chloroplast precursor (PSI-L) (PSI subunit V)
Length = 216
Score = 344 bits (882), Expect = 1e-94
Identities = 168/215 (78%), Positives = 192/215 (89%), Gaps = 3/215 (1%)
Query: 2 AAASPMASQLKSSFT-RPLVTPRGLCGSSPLHQLPS-RRQFNFTVKAIQSEKPNYQVIQP 59
A SPMASQLKS FT + LV P+G+ G + L PS RR +FTV+AI++EKP YQVIQP
Sbjct: 3 ATTSPMASQLKSGFTTKALVVPKGISGPA-LRGFPSPRRHTSFTVRAIKTEKPTYQVIQP 61
Query: 60 INGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAGP 119
+NGDPFIG LETPVTSSPL+AWYLSNLP YRTAVNPLLRG+EVGLAHGF LVGPFVKAGP
Sbjct: 62 LNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGP 121
Query: 120 LRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQTA 179
LRNTEYAG+AGSLAAAGL+VILS+CLT+YG++SF EG+PSIAP+LTLTGRKKQPD LQ+A
Sbjct: 122 LRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSA 181
Query: 180 DGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
DGW+KFTGGFFFGG+SGVTWA FL+YVLDLPY+ K
Sbjct: 182 DGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216
>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI,
chloroplast precursor (PSI-L) (PSI subunit V)
Length = 209
Score = 300 bits (769), Expect = 1e-81
Identities = 150/213 (70%), Positives = 170/213 (79%), Gaps = 7/213 (3%)
Query: 2 AAASPMASQLKSSFTRPLVTPRGLCGSSPLHQLPSRRQFNFTVKAIQSEKPNYQVIQPIN 61
A A PMASQ+ S PRG+ G+S R+ F VKA++S+KP YQV+QPIN
Sbjct: 4 AYAPPMASQVMKSGLA-CSKPRGMSGAS------LTRRPRFVVKAVKSDKPTYQVVQPIN 56
Query: 62 GDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAGPLR 121
GDPFIGSLETPVTSSPLVAWYLSNLP YRTAV+PLLRGIEVGLAHG+ LVGPF GPLR
Sbjct: 57 GDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 116
Query: 122 NTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQTADG 181
NT G AG+L A GL+ ILS+CLT+YGV+SFNEG+PS AP LTLTGRKK+ D LQTA+G
Sbjct: 117 NTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEG 176
Query: 182 WSKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 214
WS+FTGGFFFGG+SG WAYFLLYVLDLPYF K
Sbjct: 177 WSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209
>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 152
Score = 151 bits (382), Expect = 1e-36
Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 14/150 (9%)
Query: 55 QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
Q ++P N DPF+G+L TP+T+S LSNLP YR ++PLLRG+E+G+ HG+FLVGPF
Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62
Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
K GPLRN+E A AG +A GLI+I++ CL IYGV SFN D +
Sbjct: 63 YKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------E 108
Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
LQ+A GW +FT G+ G I G ++AY L+
Sbjct: 109 QLQSAKGWRQFTSGWLVGSIGGASFAYILI 138
>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 153
Score = 150 bits (379), Expect = 2e-36
Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 14/150 (9%)
Query: 55 QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
+ I+P N DPF+G+L TPV++S L NLP YR ++PLLRG+E+G+AHG+FL+GPF
Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62
Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
K GPLR T+ A AG L++ GLI+IL+ CL++YG SF D D
Sbjct: 63 DKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFTRSD--------------SKD 108
Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
PLQTA+GW +FT GF G + G +AY LL
Sbjct: 109 PLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138
>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 155
Score = 148 bits (374), Expect = 8e-36
Identities = 67/150 (44%), Positives = 100/150 (66%), Gaps = 13/150 (8%)
Query: 55 QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
++++P NGDPF+G L TP++ S LV ++ NLP YR ++P+LRG+EVG+AHG+FL+GP+
Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 63
Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
VK GPLR+++ A G ++ LI++ + CL YG+ SF +G S D
Sbjct: 64 VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SD 110
Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
PL+T++GWS+FT GFF G + A+FLL
Sbjct: 111 PLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140
>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 148
Score = 145 bits (367), Expect = 5e-35
Identities = 66/150 (44%), Positives = 99/150 (66%), Gaps = 13/150 (8%)
Query: 55 QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
++++P NGDPF+G L TP++ S LV ++ NLP YR ++P+L G+EVG+AHG+FL+GP+
Sbjct: 3 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 62
Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
VK GPLR+++ A G ++ LI++ + CL YG+ SF +G S D
Sbjct: 63 VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SD 109
Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
PL+T++GWS+FT GFF G + A+FLL
Sbjct: 110 PLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 139
>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 152
Score = 145 bits (367), Expect = 5e-35
Identities = 68/148 (45%), Positives = 96/148 (63%), Gaps = 14/148 (9%)
Query: 57 IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
I+P +PF+G+L TPV SS + WYL NLP YR ++PLLRG+E+G+AHG+F++GPF K
Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64
Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
GPLRNT+ + +G +AA GLI+I SI + IYG+ +F+ + + D L
Sbjct: 65 LGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKL 110
Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLL 204
QTA+GW + GF G + G +AY LL
Sbjct: 111 QTANGWRQLASGFLLGAVGGAGFAYILL 138
>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 172
Score = 145 bits (365), Expect = 9e-35
Identities = 71/159 (44%), Positives = 97/159 (60%), Gaps = 7/159 (4%)
Query: 45 KAIQSEKPNYQVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGL 104
K + S+ N +V+ P DP G+LETPV +SPLV W+++NLP YR + P RG+EVG+
Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68
Query: 105 AHGFFLVGPFVKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSL 164
AHG+FL GPF K GPLR+ A AG L A GL+V+ ++ L++Y N P+ S+
Sbjct: 69 AHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSLYA----NSNPPTALASV 124
Query: 165 TLTGRKKQPDPLQTADGWSKFTGGFFFGGISGVTWAYFL 203
T+ PD Q+ +GW+ F F GGI G AYFL
Sbjct: 125 TV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160
>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 157
Score = 143 bits (361), Expect = 3e-34
Identities = 68/150 (45%), Positives = 94/150 (62%), Gaps = 13/150 (8%)
Query: 55 QVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPF 114
QV+Q NGDPF+G L TP++ S ++ NLP YR ++P+LRG+EVG+AHG+FL+GP+
Sbjct: 6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPW 65
Query: 115 VKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPD 174
GPLR++EY G + A LI++ + L+ YG+ +T G + D
Sbjct: 66 TLLGPLRDSEYQYIGGLIGALALILVATAALSSYGL-------------VTFQGEQGSGD 112
Query: 175 PLQTADGWSKFTGGFFFGGISGVTWAYFLL 204
LQTADGWS+F GFF GG+ G AYFLL
Sbjct: 113 TLQTADGWSQFAAGFFVGGMGGAFVAYFLL 142
>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 173
Score = 142 bits (359), Expect = 4e-34
Identities = 73/161 (45%), Positives = 97/161 (59%), Gaps = 7/161 (4%)
Query: 49 SEKPNYQVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGF 108
S+ N +V+ P DP IG LETP+ SSPLV W++ NLP YR + RG+EVG+AHG+
Sbjct: 13 SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGY 72
Query: 109 FLVGPFVKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTG 168
++ GPF K GPLRNT A AG L+A GLI+IL+ LT+Y S + S+A
Sbjct: 73 WIFGPFAKLGPLRNTVNANLAGLLSALGLIIILTGALTLYANSKPPKPVKSVA------- 125
Query: 169 RKKQPDPLQTADGWSKFTGGFFFGGISGVTWAYFLLYVLDL 209
P+ Q+++GW+ F F GGI G AYFL L+L
Sbjct: 126 TPNPPEAFQSSEGWNNFASAFLIGGIGGAVVAYFLTSNLEL 166
>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 150
Score = 140 bits (354), Expect = 2e-33
Identities = 72/156 (46%), Positives = 99/156 (63%), Gaps = 13/156 (8%)
Query: 57 IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
I+P N DPF+G L TP+TSS + L NLP YR + PLLRG+E+GLAHG+FL+GPFVK
Sbjct: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVK 64
Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPL 176
GPLRN++ A +G L+ GLI+IL++ LTIYGV++F +G + + + L
Sbjct: 65 LGPLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDL 113
Query: 177 QTADGWSKFTGGFFFGGISGVTWAYFLLYVLDLPYF 212
QT W +F GGFF G +A L+ + +P F
Sbjct: 114 QTKKAWDQFKGGFFVGACGSAGFA--LICLSSIPAF 147
>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 166
Score = 137 bits (346), Expect = 1e-32
Identities = 74/151 (49%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 62 GDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAGPLR 121
G P IG+L TP+ SSP +++ LP YR ++ RG+E+G+AHGF L GPF GPLR
Sbjct: 10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLR 69
Query: 122 NTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGD-PSIAPSLTLTGRKKQPDPLQTAD 180
NTE AGSAG LA GL+VIL++CL++YG N G PS A S T P L T +
Sbjct: 70 NTETAGSAGLLATVGLVVILTVCLSLYG----NAGSGPSAAESTVTT--PNPPQELFTKE 123
Query: 181 GWSKFTGGFFFGGISGVTWAYFLLYVLDLPY 211
GWS+FT GF GG+ G A+F Y+ PY
Sbjct: 124 GWSEFTSGFILGGLGG---AFFAFYLASTPY 151
>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 152
Score = 129 bits (323), Expect = 7e-30
Identities = 65/152 (42%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
Query: 62 GDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVKAGPLR 121
GDP +G+L TP+ +S +++NLPGYR ++ RG+EVG+AHG+FL GPF GPLR
Sbjct: 8 GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLR 67
Query: 122 NTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPSLTLTGRKKQPDPLQTADG 181
N ++AG AG L GLI +L++ L++YG + P+ TLT P+ L T +G
Sbjct: 68 NADFAGVAGLLGTVGLISLLTLALSLYGSVGVS------TPTATLT-TPNPPENLGTKEG 120
Query: 182 WSKFTGGFFFGGISGVTWAYFLLYVLDLPYFV 213
WS+F GF GG G AY L L + Y +
Sbjct: 121 WSEFAAGFLIGGCGGALVAYGLCIALPMMYTI 152
>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V)
Length = 199
Score = 110 bits (276), Expect = 2e-24
Identities = 63/154 (40%), Positives = 86/154 (54%), Gaps = 8/154 (5%)
Query: 57 IQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAHGFFLVGPFVK 116
+ P++ DP +G+L TPV S +L+NLP YR ++P RG+EVG A G+ L GP+
Sbjct: 39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAM 97
Query: 117 AGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFNEGDPSIAPS-LTLTGRKKQPDP 175
GPLRNT+YA +AG L G + IL+ L +Y P+I PS T+ P
Sbjct: 98 TGPLRNTDYALTAGLLGTIGAVHILTALLVLYNAPG---KAPNIQPSDCTI---NNPPAD 151
Query: 176 LQTADGWSKFTGGFFFGGISGVTWAYFLLYVLDL 209
L T GW+ FT GF+ GG G +A+ L L L
Sbjct: 152 LFTRSGWADFTSGFWLGGCGGAVFAWLLCGTLHL 185
>PSAL_ANAVA (P31092) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V) (Fragments)
Length = 65
Score = 48.9 bits (115), Expect = 9e-06
Identities = 26/67 (38%), Positives = 37/67 (54%), Gaps = 8/67 (11%)
Query: 47 IQSEKPNYQVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPGYRTAVNPLLRGIEVGLAH 106
+ S+ N +V+ P DP G+LETPV +SPLV + + L Y + VG+AH
Sbjct: 2 LPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKKFFNXLTAYXXGL--------VGMAH 53
Query: 107 GFFLVGP 113
G+ L GP
Sbjct: 54 GYXLXGP 60
>PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI
(PSI-L) (PSI subunit V) (Fragment)
Length = 20
Score = 30.8 bits (68), Expect = 2.5
Identities = 10/18 (55%), Positives = 15/18 (82%)
Query: 55 QVIQPINGDPFIGSLETP 72
++++P NGDPF+G L TP
Sbjct: 3 ELVKPYNGDPFVGHLSTP 20
>YHDP_ECOLI (P46474) Hypothetical protein yhdP precursor
Length = 1266
Score = 29.3 bits (64), Expect = 7.1
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 38 RQFNFTVKAIQSEKPNYQVIQPINGDPFIGSLETPVTSSPLVAW--YLSNLPGYRTAVNP 95
R + KA+ + + ++ +QP N +P++G L T AW + NL G + V+
Sbjct: 469 RNIDVKAKAVHA-RGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMG-KDLVDY 526
Query: 96 LLRGIEVGLAHGFFLV--------------GPFVKAGPLRNTEYA 126
L I+ G A LV G F PLRN ++A
Sbjct: 527 LSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLRNAKFA 571
>YCBT_BACSU (P42252) Hypothetical protein ycbT
Length = 245
Score = 29.3 bits (64), Expect = 7.1
Identities = 32/125 (25%), Positives = 54/125 (42%), Gaps = 16/125 (12%)
Query: 96 LLRGIEVGLAHGF-FLVGPFVKAGPLRNTEYAGSAGSLAAAGLIVILSICLTIYGVSSFN 154
L R I V LA F FL+ F+ + + G LA G IL + + + G+ +
Sbjct: 15 LRRRIIVTLAAFFLFLITAFLFVQDIYDWLIRDLDGKLAVLGPSEILWVYMMLSGICAIA 74
Query: 155 EGDPS--------IAPSLTLTGRKKQPDPLQTADGWSKFTGGFFFGGISGVTWAYFLLYV 206
P +AP+LT T RK + + G F ++G+++ YF+L+
Sbjct: 75 ASIPVAAYQLWRFVAPALTKTERK-------VTIMYIMYIPGLFALFLAGISFGYFVLFP 127
Query: 207 LDLPY 211
+ L +
Sbjct: 128 IVLSF 132
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.139 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,569,542
Number of Sequences: 164201
Number of extensions: 1253361
Number of successful extensions: 2504
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2469
Number of HSP's gapped (non-prelim): 23
length of query: 214
length of database: 59,974,054
effective HSP length: 106
effective length of query: 108
effective length of database: 42,568,748
effective search space: 4597424784
effective search space used: 4597424784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Medicago: description of AC148289.12