BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148289.1 + phase: 0
(340 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AEC8_ARATH (Q9FFD0) Putative auxin efflux carrier component 8 (A... 465 e-131
AEC5_ARATH (Q9LFP6) Putative auxin efflux carrier component 5 (A... 256 7e-68
AEC4_ARATH (Q8RWZ6) Auxin efflux carrier component 4 (AtPIN4) 178 2e-44
AEC3_ARATH (Q9S7Z8) Auxin efflux carrier component 3 (AtPIN3) 177 3e-44
AEC7_ARATH (Q940Y5) Auxin efflux carrier component 7 (AtPIN7) 175 2e-43
AEC1_ARATH (Q9C6B8) Auxin efflux carrier component 1 (PIN-FORMED... 171 2e-42
AEC2_ARATH (Q9LU77) Auxin efflux carrier component 2 (AtPIN2) (A... 171 2e-42
AEC6_ARATH (Q9SQH6) Probable auxin efflux carrier component 6 (A... 151 2e-36
YWKB_BACSU (P45869) Hypothetical protein ywkB 50 6e-06
YFDV_ECOLI (P76519) Hypothetical protein yfdV 49 1e-05
YA31_METJA (Q58437) Hypothetical protein MJ1031 42 0.002
MDCF_RHIME (P56949) Putative malonate transporter 33 1.0
MURB_BDEBA (P61433) UDP-N-acetylenolpyruvoylglucosamine reductas... 32 2.3
DP3A_BORBU (O51526) DNA polymerase III alpha subunit (EC 2.7.7.7) 32 2.3
NU2M_PISOC (P24996) NADH-ubiquinone oxidoreductase chain 2 (EC 1... 32 3.0
COX1_TRYBB (P04371) Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 31 5.1
>AEC8_ARATH (Q9FFD0) Putative auxin efflux carrier component 8
(AtPIN8)
Length = 351
Score = 465 bits (1197), Expect = e-131
Identities = 235/340 (69%), Positives = 274/340 (80%), Gaps = 12/340 (3%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI DVYKVI A+VPLY ALILGYGSV+WW IFTR+QCDAIN+LVCYFTLPLF EFTA
Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
H+DPF MN+ FI AD LSK+IIV V+ALWAK S+K SY WSITSFSLCTLTNSLVVG+P+
Sbjct: 61 HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120
Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFRRTGIEGTITTLKPKASSISNVTCEG 180
K MYG VDLVVQ+SV QAI+WLTLLLFVLEFR+ G +++IS+V +
Sbjct: 121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKAGF---------SSNNISDVQVDN 171
Query: 181 EESKDVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRWNLELPS 240
+ + +V S FL++M VWLKL NPN Y C++GI+WAFISNRW+LELP
Sbjct: 172 INIESGKRETVVVGEKS---FLEVMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPG 228
Query: 241 MVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAMAISAFI 300
++EGSILIMSKAGTGTAMF+MGIFMALQEK+I CG SLTV G+VLKFIAGPAAMAI + +
Sbjct: 229 ILEGSILIMSKAGTGTAMFNMGIFMALQEKLIVCGTSLTVMGMVLKFIAGPAAMAIGSIV 288
Query: 301 VGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLSTA 340
+GL GDVLR+AIIQAA+PQSITSFIFAKEY LHA+VLSTA
Sbjct: 289 LGLHGDVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTA 328
>AEC5_ARATH (Q9LFP6) Putative auxin efflux carrier component 5
(AtPIN5)
Length = 367
Score = 256 bits (653), Expect = 7e-68
Identities = 126/345 (36%), Positives = 205/345 (58%), Gaps = 6/345 (1%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI W D+Y V+ A VPLY ++ LG+ S R K+F+ EQC INK V F++PL +F+ +
Sbjct: 1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIAL----WAKCSSKVS-YSWSITSFSLCTLTNSLV 115
+PFKM+ I +D L K ++V V+A+ W + W IT S+ L N+L+
Sbjct: 61 ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120
Query: 116 VGIPMVKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFRRT-GIEGTITTLKPKASSIS 174
+G+P++ +YG ++ Q V+Q++IW T+LLF+ E + + +L+ +
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQE 180
Query: 175 NVTCEGEESKDVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRW 234
E E ++ + + + + ++++ + W KLI NPN+Y +IGI WA + R
Sbjct: 181 EANIEDEPKEEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFRL 240
Query: 235 NLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAM 294
LP M++ SI ++S G G AMFS+G+FMA Q +I+CG + + ++LKF+ GPA M
Sbjct: 241 GWNLPEMIDKSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLKFVLGPALM 300
Query: 295 AISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
SA+ + L+ + ++AI+QAA+PQ + F+FAKEY LH E++ST
Sbjct: 301 IASAYCIRLKSTLFKVAILQAALPQGVVPFVFAKEYNLHPEIIST 345
>AEC4_ARATH (Q8RWZ6) Auxin efflux carrier component 4 (AtPIN4)
Length = 616
Score = 178 bits (452), Expect = 2e-44
Identities = 83/155 (53%), Positives = 109/155 (69%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI W D+Y V+ AVVPLY A+IL YGSV+WWKIF+ +QC IN+ V F +PL +F F +
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
DP+ MNF F+ ADTL K+I++ ++ALWA + S W IT FSL TL N+LV+GIP+
Sbjct: 61 TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
+ MYG L+VQ V+Q IIW TLLLF+ E+R
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYR 155
Score = 162 bits (410), Expect = 1e-39
Identities = 79/167 (47%), Positives = 113/167 (67%), Gaps = 1/167 (0%)
Query: 174 SNVTCEGEESK-DVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISN 232
SN T E E + D NN + + ++ VW KLI NPN+Y +IG+ WA ++
Sbjct: 428 SNSTAELEAAGGDGGGNNGTHMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWALVAY 487
Query: 233 RWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPA 292
RW++ +P +++ SI I+S AG G AMFS+G+FMALQ K+I+CG S+ F + ++FI GPA
Sbjct: 488 RWHVAMPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFITGPA 547
Query: 293 AMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
MA++ +GL GD+LRIAI+QAA+PQ I F+FAKEY +H +LST
Sbjct: 548 IMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILST 594
>AEC3_ARATH (Q9S7Z8) Auxin efflux carrier component 3 (AtPIN3)
Length = 640
Score = 177 bits (449), Expect = 3e-44
Identities = 83/155 (53%), Positives = 109/155 (69%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI W D+Y V+ AV+PLY A+IL YGSVRWWKIF+ +QC IN+ V F +PL +F F +
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
+P+ MN FI ADTL K+I+++++ LWA + S WSIT FSL TL N+LV+GIP+
Sbjct: 61 TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
+ MYG L+VQ V+Q IIW TLLLF+ EFR
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFR 155
Score = 163 bits (412), Expect = 7e-40
Identities = 71/132 (53%), Positives = 102/132 (76%)
Query: 208 VWLKLIANPNSYGCVIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMAL 267
VW KLI NPN+Y +IG+ WA ++ RW++ +P +++ SI I+S AG G AMFS+G+FMAL
Sbjct: 487 VWRKLIRNPNTYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLFMAL 546
Query: 268 QEKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFA 327
Q K+I+CG S+ F + ++F+ GPA MA++A +GLRGD+LR+AI+QAA+PQ I F+FA
Sbjct: 547 QPKLIACGNSVATFAMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQAALPQGIVPFVFA 606
Query: 328 KEYELHAEVLST 339
KEY +H +LST
Sbjct: 607 KEYNVHPAILST 618
>AEC7_ARATH (Q940Y5) Auxin efflux carrier component 7 (AtPIN7)
Length = 619
Score = 175 bits (443), Expect = 2e-43
Identities = 82/155 (52%), Positives = 108/155 (68%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI W D+Y V+ AV+PLY A+IL YGSVRWWKIF+ +QC IN+ V F +PL +F F +
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
+P+ MN FI ADTL KLI++ ++ +WA + S WSIT FSL TL N+LV+GIP+
Sbjct: 61 SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
+ MYG L+VQ V+Q IIW TLLLF+ E+R
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYR 155
Score = 162 bits (410), Expect = 1e-39
Identities = 79/170 (46%), Positives = 112/170 (65%), Gaps = 7/170 (4%)
Query: 175 NVTCEGEESKDVEANNIVEYTSSRLPFLQLMKR-----VWLKLIANPNSYGCVIGISWAF 229
N T E + +E V +P +M R VW KLI NPN+Y +IG+ WA
Sbjct: 430 NSTAELNPKEAIETGETVPV--KHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWAL 487
Query: 230 ISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIA 289
++ RW++ +P +++ SI I+S AG G AMFS+G+FMALQ K+I+CG S F + ++F
Sbjct: 488 VAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFAMAVRFFT 547
Query: 290 GPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
GPA MA++A +GLRGD+LR+AI+QAA+PQ I F+FAKEY +H +LST
Sbjct: 548 GPAVMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 597
>AEC1_ARATH (Q9C6B8) Auxin efflux carrier component 1 (PIN-FORMED
protein) (AtPIN1)
Length = 622
Score = 171 bits (434), Expect = 2e-42
Identities = 81/155 (52%), Positives = 109/155 (70%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI D Y V+ A+VPLY A+IL YGSV+WWKIFT +QC IN+ V F +PL +F F A
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
+P+ MN F+ AD+L K+I+++++ LW K S S W+IT FSL TL N+LV+GIP+
Sbjct: 61 ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120
Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
+K MYG DL+VQ V+Q IIW TL+LF+ E+R
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYR 155
Score = 160 bits (404), Expect = 6e-39
Identities = 85/192 (44%), Positives = 122/192 (63%), Gaps = 19/192 (9%)
Query: 168 PKASSISNVTCEGEE----SKDVEA--------NNIVEYTSSR--LPFLQLMKR-----V 208
P+ +S N E EE +KD ++ NNI T+ +P +M R V
Sbjct: 410 PQGNSNDNQYVEREEFSFGNKDDDSKVLATDGGNNISNKTTQAKVMPPTSVMTRLILIMV 469
Query: 209 WLKLIANPNSYGCVIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQ 268
W KLI NPNSY + GI+W+ IS +WN+E+P+++ SI I+S AG G AMFS+G+FMAL
Sbjct: 470 WRKLIRNPNSYSSLFGITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGLFMALN 529
Query: 269 EKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAK 328
++I+CG F ++F+ GPA M ++++ VGLRG +L +AIIQAA+PQ I F+FAK
Sbjct: 530 PRIIACGNRRAAFAAAMRFVVGPAVMLVASYAVGLRGVLLHVAIIQAALPQGIVPFVFAK 589
Query: 329 EYELHAEVLSTA 340
EY +H ++LSTA
Sbjct: 590 EYNVHPDILSTA 601
>AEC2_ARATH (Q9LU77) Auxin efflux carrier component 2 (AtPIN2)
(Auxin efflux carrier AGR) (Polar-auxin-transport efflux
component AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive
root 1) (AtEIR1) (WAVY6)
Length = 647
Score = 171 bits (433), Expect = 2e-42
Identities = 80/155 (51%), Positives = 110/155 (70%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI +D+Y V+ A+VPLY A+IL YGSVRWW IFT +QC IN+ V F +PL +F F +
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
DP+ MN+ F+ AD+L K++I+A + LW S + S W IT FSL TL N+LV+GIP+
Sbjct: 61 SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120
Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
++ MYG +L+VQ V+Q+IIW TL+LF+ EFR
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFR 155
Score = 162 bits (411), Expect = 9e-40
Identities = 69/133 (51%), Positives = 104/133 (77%)
Query: 208 VWLKLIANPNSYGCVIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMAL 267
VW KLI NPN+Y + G++W+ +S +WN+++P+++ GSI I+S AG G AMFS+G+FMAL
Sbjct: 494 VWRKLIRNPNTYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMAL 553
Query: 268 QEKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFA 327
Q K+I+CG S+ F + ++F+ GPA +A ++ +G+RGD+L IAI+QAA+PQ I F+FA
Sbjct: 554 QPKIIACGKSVAGFAMAVRFLTGPAVIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFA 613
Query: 328 KEYELHAEVLSTA 340
KEY +H ++LSTA
Sbjct: 614 KEYNVHPDILSTA 626
>AEC6_ARATH (Q9SQH6) Probable auxin efflux carrier component 6
(AtPIN6)
Length = 570
Score = 151 bits (382), Expect = 2e-36
Identities = 73/155 (47%), Positives = 102/155 (65%)
Query: 1 MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
MI + Y V+ A+ PLYFA+ + YGSV+W KIFT QC IN+ V F +P+ +F F +
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 61 HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
+P+KM+ +FI ADTLSK+ + +++LWA W IT FS+ TL N+LV+GIP+
Sbjct: 61 QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120
Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
++ MYG L+VQ V+Q IIW TLLLF+ E R
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELR 155
Score = 146 bits (368), Expect = 8e-35
Identities = 72/160 (45%), Positives = 108/160 (67%)
Query: 180 GEESKDVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRWNLELP 239
G+++ V A E S+ + ++ V KL NPN+Y ++G+ W+ IS +WN+ +P
Sbjct: 389 GKDTTPVAAIGKQEMPSAIVMMRLILTVVGRKLSRNPNTYSSLLGLVWSLISFKWNIPMP 448
Query: 240 SMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAMAISAF 299
++V+ SI I+S AG G AMFS+G+FMALQ K+I CG G++++FI+GP MA ++
Sbjct: 449 NIVDFSIKIISDAGLGMAMFSLGLFMALQPKMIPCGAKKATMGMLIRFISGPLFMAGASL 508
Query: 300 IVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
+VGLRG L AI+QAA+PQ I F+FA+EY LH ++LST
Sbjct: 509 LVGLRGSRLHAAIVQAALPQGIVPFVFAREYNLHPDLLST 548
>YWKB_BACSU (P45869) Hypothetical protein ywkB
Length = 319
Score = 50.4 bits (119), Expect = 6e-06
Identities = 68/340 (20%), Positives = 142/340 (41%), Gaps = 49/340 (14%)
Query: 7 VYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTAHIDPFK 66
+ +++ + P++F ++LG+ + + + + ++ LV + LP A + +
Sbjct: 3 ILDILILLAPIFFVIVLGWFAGHFGS-YDAKSAKGVSTLVTKYALP--AHFIAGILTTSR 59
Query: 67 MNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNS----LVVGIPMVK 122
FL +S +I + + + + + +T+ S+ +L ++ +GIP++
Sbjct: 60 SEFLSQVPLMISLIIGIVGFYIIILLVCRFIFKYDLTNSSVFSLNSAQPTFAFMGIPVLG 119
Query: 123 PMYG--PMGVDLVVQASVVQAIIWLTLLLFVLEFRRTGIEGTITTLKPKASSISNVTCEG 180
++G + + + V VV AI L P A I+ V G
Sbjct: 120 SLFGANEVAIPIAVTGIVVNAI-----------------------LDPLAIIIATV---G 153
Query: 181 EESKDVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRWNLELPS 240
E SK E S F ++ + L + P + +I + + +N LP
Sbjct: 154 ESSKKNE--------ESGDSFWKMTGKSILHGLCEPLAAAPLISMILVLV---FNFTLPE 202
Query: 241 MVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAMAISAFI 300
+ + + +G A+F++G+ + +++ +S P++ + +LK PA M + A
Sbjct: 203 LGVKMLDQLGSTTSGVALFAVGVTVGIRKIKLSM-PAIGI--ALLKVAVQPALMFLIALA 259
Query: 301 VGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLSTA 340
+GL D AI+ A P S + + A +E E +TA
Sbjct: 260 IGLPADQTTKAILLVAFPGSAVAAMIATRFEKQEEETATA 299
>YFDV_ECOLI (P76519) Hypothetical protein yfdV
Length = 314
Score = 49.3 bits (116), Expect = 1e-05
Identities = 69/329 (20%), Positives = 138/329 (40%), Gaps = 62/329 (18%)
Query: 14 VVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTAHIDPFKMNFLFIG 73
++P+ ++LGY S R + F+ +Q A NKLV + LP F + + N I
Sbjct: 9 LLPIIVIMLLGYFSGRR-ETFSEDQARAFNKLVLNYALPAALF-----VSITRANREMIF 62
Query: 74 ADTLSKLIIVAVIA-----LWAKCSS--KVSYSWSITSFSLCTLTNSLVVGIPMVKPMYG 126
ADT L+ + VI W C K +++ + + +G ++ P+YG
Sbjct: 63 ADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYG 122
Query: 127 -PMGVDLVVQ-ASVVQAIIWLTLLLFVLEFRRTGIEGTITTLKPKASSISNVTCEGEESK 184
+ LVV S++ I + + L++L +G +G K S++S + +E
Sbjct: 123 DSVSTGLVVAIISIIVNAITIPIGLYLLN-PSSGADG------KKNSNLSALISAAKEPV 175
Query: 185 DVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRWNLELPSMVEG 244
VW ++A + ++G+ ++P+ +
Sbjct: 176 -----------------------VWAPVLA---TILVLVGV-----------KIPAAWDP 198
Query: 245 SILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLR 304
+ +++KA +G A+F+ G+ +A + S + F LK I P A+ + L
Sbjct: 199 TFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTF---LKLILMPLALLLVGMACHLN 255
Query: 305 GDVLRIAIIQAAVPQSITSFIFAKEYELH 333
+ L++ ++ A+P + + I A + ++
Sbjct: 256 SEHLQMMVLAGALPPAFSGIIIASRFNVY 284
>YA31_METJA (Q58437) Hypothetical protein MJ1031
Length = 308
Score = 42.4 bits (98), Expect = 0.002
Identities = 23/119 (19%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 222 VIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVF 281
++ I F + N +PS + S+ +S A M S+G+ +L K + G +
Sbjct: 172 ILSIILVFFGFKLNY-IPSFILKSLNYLSSATVPLIMMSLGL--SLSPKALKFGVFWGII 228
Query: 282 GLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLSTA 340
+ +FI PA + ++ ++G + ++++++P ++ + + YEL ++++++
Sbjct: 229 ASIFRFIVSPATAFTLSELINIKGLEKNVLLVESSMPSAMMTLVLGTLYELDIKLIASS 287
>MDCF_RHIME (P56949) Putative malonate transporter
Length = 320
Score = 33.1 bits (74), Expect = 1.0
Identities = 25/113 (22%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 224 GISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGL 283
G++ AF+S E P ++ I +++A A+F+MG+ +AL + + P+ + +
Sbjct: 179 GVAAAFLS----FEPPLPLQRLIDYLAQAAAPCALFAMGVTLAL--RPLKRIPAEIGYIV 232
Query: 284 VLKFIAGPAAMAISAFIVGLRGDV-LRIAIIQAAVPQSITSFIFAKEYELHAE 335
K + P M ++ + G + ++ A++ A++P + F+ ++Y + E
Sbjct: 233 PAKLVLHPVLMYLALSLGGAYDPIWVQTAVLLASLPTATNVFVIGQQYGVWQE 285
>MURB_BDEBA (P61433) UDP-N-acetylenolpyruvoylglucosamine reductase
(EC 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
Length = 336
Score = 32.0 bits (71), Expect = 2.3
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 181 EESKDVEANNIVEYTSSRLPFLQLMKRVWLK-LIANPNSYGCVIGISWAFISNRWNLELP 239
+ S D+ ++N ++ S F++L L L+ NP + + W + NL LP
Sbjct: 4 QNSHDLSSSNTLQLRSLAERFVELYTPADLSTLLMNPE----LKNLPWKILGGGSNLVLP 59
Query: 240 SMVEGSILIMSKAG 253
S +EG +L +S G
Sbjct: 60 SQIEGLVLKVSNLG 73
>DP3A_BORBU (O51526) DNA polymerase III alpha subunit (EC 2.7.7.7)
Length = 1147
Score = 32.0 bits (71), Expect = 2.3
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 49 FTLPLFAFEFTAH-IDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSL 107
F L F + H +DP+K D+ S L ++ +A AK S V +S + S +
Sbjct: 940 FEKELLGFYVSGHPLDPYKK-----AIDSFSSLNVLTDLA--AKKDSIVQFSGILNSVKV 992
Query: 108 C-TLTNSLVVGIPMVKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFRRTGIEGTITTL 166
T N+ + +++ G +D+VV + F+LE G+ G +T
Sbjct: 993 IQTKRNNAKMAFGVIEDFKG--AIDIVVFTESYERY-----RNFLLEGNVIGVVGRLTFN 1045
Query: 167 KPKASSISNVTCEGEESKDVEANNI-VEYTSSRLPFLQLM 205
+ K S + E + + NNI +++ +++L LQL+
Sbjct: 1046 RDKFSIVVEKVVNIERLSEYKINNIHIKFLNNKLNDLQLL 1085
>NU2M_PISOC (P24996) NADH-ubiquinone oxidoreductase chain 2 (EC
1.6.5.3)
Length = 353
Score = 31.6 bits (70), Expect = 3.0
Identities = 25/105 (23%), Positives = 52/105 (48%), Gaps = 8/105 (7%)
Query: 10 VIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTAHIDPFKMNF 69
V++ ++ + ++++ S W+ + CD + +L LP+ +F+ + +
Sbjct: 6 VLILLLNIIVSVVIVLSSHSWFSV-----CDGL-ELNTLSVLPILCGQFSPRGVESTIKY 59
Query: 70 LFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSL 114
+ A + + ++ VA++ LW CSS S S + SFS LT +L
Sbjct: 60 FLVQAFSAAMILNVALVQLWL-CSS-WSVSCPLNSFSSIVLTLAL 102
>COX1_TRYBB (P04371) Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Length = 549
Score = 30.8 bits (68), Expect = 5.1
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 56 FEFTAHIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLV 115
F F I + ++FLF A TL ++++ + ++ C V W F + T SL
Sbjct: 436 FAFPRRISDYPISFLFWSAFTLYGMLLLTFLVIFCCCLFNVILFWDYCLFFINLFTYSLS 495
Query: 116 V 116
+
Sbjct: 496 I 496
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.326 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,655,312
Number of Sequences: 164201
Number of extensions: 1393375
Number of successful extensions: 4075
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4050
Number of HSP's gapped (non-prelim): 25
length of query: 340
length of database: 59,974,054
effective HSP length: 111
effective length of query: 229
effective length of database: 41,747,743
effective search space: 9560233147
effective search space used: 9560233147
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC148289.1