
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148241.10 - phase: 1 /pseudo
(611 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GPX2_YEAST (P38143) Glutathione peroxidase 2 (EC 1.11.1.9) 34 0.98
HI82_RHIME (Q92L21) Histidinol-phosphate aminotransferase 2 (EC ... 32 6.3
>GPX2_YEAST (P38143) Glutathione peroxidase 2 (EC 1.11.1.9)
Length = 162
Score = 34.3 bits (77), Expect = 0.98
Identities = 30/104 (28%), Positives = 47/104 (44%), Gaps = 18/104 (17%)
Query: 404 KLIFVVNVVGSS--TKRHDELQAAQSKEIENLLETGEIVTGKGKNQVGTVKRAGDTRWGS 461
K++ +VNV T ++ EL+ K + G ++ G NQ G + D +
Sbjct: 26 KVVLIVNVASKCGFTPQYKELEELYKK----YQDKGFVILGFPCNQFGKQEPGSDEQ--- 78
Query: 462 HFNSICSLISMYGATCPVLKIIAKDAKKIAQRADADSSYNHLKS 505
C L YG T P++K I + ++ADS YN+LKS
Sbjct: 79 -ITEFCQL--NYGVTFPIMKKIDVNG------SNADSVYNYLKS 113
>HI82_RHIME (Q92L21) Histidinol-phosphate aminotransferase 2 (EC
2.6.1.9) (Imidazole acetol-phosphate transaminase 2)
Length = 351
Score = 31.6 bits (70), Expect = 6.3
Identities = 19/58 (32%), Positives = 31/58 (52%), Gaps = 2/58 (3%)
Query: 556 NGWDKLFANVVSFCEKHD--IEVPDLNDSHSTTRFGRSHLEENQVTIEHYFRVDFFYY 611
NG D++ A+ + KHD + PD++ S TT G +E +V ++ FR+D Y
Sbjct: 84 NGSDEVLAHTFAALLKHDRPLLFPDISYSFYTTYAGLFGIEAVEVPLDAAFRIDIADY 141
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.359 0.157 0.535
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,462,353
Number of Sequences: 164201
Number of extensions: 1870072
Number of successful extensions: 10158
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10158
Number of HSP's gapped (non-prelim): 2
length of query: 611
length of database: 59,974,054
effective HSP length: 116
effective length of query: 495
effective length of database: 40,926,738
effective search space: 20258735310
effective search space used: 20258735310
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 69 (31.2 bits)
Medicago: description of AC148241.10