Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148241.10 - phase: 1 /pseudo
         (611 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GPX2_YEAST (P38143) Glutathione peroxidase 2 (EC 1.11.1.9)             34  0.98
HI82_RHIME (Q92L21) Histidinol-phosphate aminotransferase 2 (EC ...    32  6.3

>GPX2_YEAST (P38143) Glutathione peroxidase 2 (EC 1.11.1.9)
          Length = 162

 Score = 34.3 bits (77), Expect = 0.98
 Identities = 30/104 (28%), Positives = 47/104 (44%), Gaps = 18/104 (17%)

Query: 404 KLIFVVNVVGSS--TKRHDELQAAQSKEIENLLETGEIVTGKGKNQVGTVKRAGDTRWGS 461
           K++ +VNV      T ++ EL+    K      + G ++ G   NQ G  +   D +   
Sbjct: 26  KVVLIVNVASKCGFTPQYKELEELYKK----YQDKGFVILGFPCNQFGKQEPGSDEQ--- 78

Query: 462 HFNSICSLISMYGATCPVLKIIAKDAKKIAQRADADSSYNHLKS 505
                C L   YG T P++K I  +       ++ADS YN+LKS
Sbjct: 79  -ITEFCQL--NYGVTFPIMKKIDVNG------SNADSVYNYLKS 113


>HI82_RHIME (Q92L21) Histidinol-phosphate aminotransferase 2 (EC
           2.6.1.9) (Imidazole acetol-phosphate transaminase 2)
          Length = 351

 Score = 31.6 bits (70), Expect = 6.3
 Identities = 19/58 (32%), Positives = 31/58 (52%), Gaps = 2/58 (3%)

Query: 556 NGWDKLFANVVSFCEKHD--IEVPDLNDSHSTTRFGRSHLEENQVTIEHYFRVDFFYY 611
           NG D++ A+  +   KHD  +  PD++ S  TT  G   +E  +V ++  FR+D   Y
Sbjct: 84  NGSDEVLAHTFAALLKHDRPLLFPDISYSFYTTYAGLFGIEAVEVPLDAAFRIDIADY 141


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.359    0.157    0.535 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,462,353
Number of Sequences: 164201
Number of extensions: 1870072
Number of successful extensions: 10158
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10158
Number of HSP's gapped (non-prelim): 2
length of query: 611
length of database: 59,974,054
effective HSP length: 116
effective length of query: 495
effective length of database: 40,926,738
effective search space: 20258735310
effective search space used: 20258735310
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 69 (31.2 bits)


Medicago: description of AC148241.10