BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147964.5 + phase: 0
(447 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y806_HAEIN (P44054) Hypothetical protein HI0806 52 2e-06
Y441_METJA (Q57883) Hypothetical protein MJ0441 43 0.002
YRKJ_BACSU (P54437) Hypothetical protein yrkJ 41 0.005
YCB9_PSEDE (P29942) Hypothetical 27.4 kDa protein in cobO 3'regi... 40 0.009
Y4HK_RHISN (P55478) Hypothetical 25.4 kDa protein y4hK 37 0.079
MNTH_THETN (Q8R7S2) Probable manganese transport protein mntH 36 0.23
Y902_HAEIN (P44070) Hypothetical protein HI0902 35 0.51
NU5M_CANPA (P48919) NADH-ubiquinone oxidoreductase chain 5 (EC 1... 33 1.5
LEP4_AERSA (O68964) Type 4 prepilin-like proteins leader peptide... 32 2.5
ABC9_RAT (Q9QYJ4) ATP-binding cassette, sub-family B, member 9 p... 32 2.5
ABC9_MOUSE (Q9JJ59) ATP-binding cassette, sub-family B, member 9... 32 2.5
ABC9_HUMAN (Q9NP78) ATP-binding cassette, sub-family B, member 9... 32 2.5
YFBS_ECOLI (P77741) Hypothetical protein yfbS 32 3.3
SECY_BACHD (P38375) Preprotein translocase secY subunit 32 3.3
DHAL_CLAHE (P40108) Aldehyde dehydrogenase (EC 1.2.1.3) (ALDDH) ... 32 3.3
YCF1_PINTH (P41647) Hypothetical 205.3 kDa protein ycf1 (ORF 1756) 32 4.3
YD82_METTH (O27435) Hypothetical protein MTH1382 31 5.7
PEPF_BACSU (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-) 31 5.7
YFCA_HAEIN (P46490) Hypothetical protein HI0198 31 7.4
RFBP_SALTY (P26406) Undecaprenyl-phosphate galactose phosphotran... 31 7.4
>Y806_HAEIN (P44054) Hypothetical protein HI0806
Length = 268
Score = 52.4 bits (124), Expect = 2e-06
Identities = 35/121 (28%), Positives = 65/121 (52%), Gaps = 8/121 (6%)
Query: 297 FHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLEL--GIPPQVASATSTFAMVFSSSMS 354
F I + CGI MVS + G+GGG ++ P+ L +P QV SATS +V +++
Sbjct: 3 FSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATS-LTIVMCTALI 61
Query: 355 VVQYYHLDRFPIPYASYLVLVATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAIS 414
+ ++H + I Y + +++ +IA + G + ++ F A + L FT+ +SA++
Sbjct: 62 NLLFFHKQKIKIDYIN--MILWSIAMVIGVQIGFELSFYFSTA---IISLIFTVSLSALA 116
Query: 415 L 415
+
Sbjct: 117 I 117
Score = 35.4 bits (80), Expect = 0.30
Identities = 23/119 (19%), Positives = 55/119 (45%), Gaps = 11/119 (9%)
Query: 54 IVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPK---SSTALSKCMITGAAGSTVYYNLR 110
I G + ++ G+GGG + +P+L + P S+T+L+ M T ++ +
Sbjct: 11 ICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALINLLFFHKQK 70
Query: 111 LRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTSTKALV 169
++ IDY +L+ +++G+ IG + F+ +++++ + + K +
Sbjct: 71 IK--------IDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFL 121
Score = 35.0 bits (79), Expect = 0.39
Identities = 18/55 (32%), Positives = 31/55 (55%), Gaps = 3/55 (5%)
Query: 305 FCGIIAGMVSGLLGLGGGFILGPLFLEL-GIPPQVASATSTFAMVFSSSMSVVQY 358
FCG G+++G+ G+GGG IL PL +L G+ Q + + + M+ ++ Y
Sbjct: 145 FCG--GGLIAGITGIGGGSILAPLVGQLKGVKTQQIAVYTNYMMIIGGIGNLYGY 197
>Y441_METJA (Q57883) Hypothetical protein MJ0441
Length = 267
Score = 42.7 bits (99), Expect = 0.002
Identities = 25/97 (25%), Positives = 45/97 (45%), Gaps = 9/97 (9%)
Query: 303 YCFCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQY---- 358
+ CG+I G +SGL G+GGG ++ P+ P + A A S + +S ++ Y
Sbjct: 149 FILCGVITGFLSGLFGIGGGIVIIPILAMAKYPVKRAVAISVGVIPLTSIGGLISYLTAN 208
Query: 359 -----YHLDRFPIPYASYLVLVATIAALTGQHVVRKI 390
Y++ IP A + + ++ G + +KI
Sbjct: 209 TEGYIYNIGYVSIPIALIMAIPIIYSSKLGIKINQKI 245
Score = 38.5 bits (88), Expect = 0.035
Identities = 29/117 (24%), Positives = 58/117 (48%), Gaps = 7/117 (5%)
Query: 302 LYCFCGIIAGMVSGLLGLGGGFILGP----LFLELGIPPQV--ASATSTFAMVFSSSMSV 355
L G I G++ L G+GGGF++ P +F GIP V A TS F + +S +S+
Sbjct: 15 LLIIVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGVKFAVGTSLFVVFINSIISI 74
Query: 356 VQYYHLDRFPIPYASYLVLVATI-AALTGQHVVRKIIAIFGRASIIVFILAFTIFVS 411
++ + + + +++ + + +G VV I + + +F++A I+++
Sbjct: 75 FRHAKIKNINWKASITIGIISLVFSYFSGFLVVNFIDSAILKKLFGIFLIANAIYMA 131
Score = 33.5 bits (75), Expect = 1.1
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 54 IVGFFGAALGSVGGVGGGGIFIPMLTLIIGF 84
IVGF LGS+ G+GGG + P+LT I +
Sbjct: 18 IVGFIVGILGSLFGIGGGFLVAPILTFIFDY 48
Score = 30.8 bits (68), Expect = 7.4
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 49 IVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCMI--TGAAGSTVY 106
I+ G I GF L + G+GGG + IP+L + + K + A+S +I T G Y
Sbjct: 150 ILCGVITGF----LSGLFGIGGGIVIIPILAM-AKYPVKRAVAISVGVIPLTSIGGLISY 204
Query: 107 YNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILL 156
++ + +AL+ ++ +G+ N + + I+L
Sbjct: 205 LTANTEGYIYNIGYVSIPIALIMAIPIIYSSKLGIKINQKISPKHLRIML 254
>YRKJ_BACSU (P54437) Hypothetical protein yrkJ
Length = 261
Score = 41.2 bits (95), Expect = 0.005
Identities = 35/108 (32%), Positives = 52/108 (47%), Gaps = 6/108 (5%)
Query: 309 IAGMVSGLLGLGGGFILGPLFLE-LGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPIP 367
I G VSG+LG GG FIL P+ L L IP +V A+S SS + V +
Sbjct: 154 IIGGVSGILGAGGAFILVPIMLSILNIPVRVTVASSLAITFLSSIGATVGKVITGQVLFV 213
Query: 368 YASYLVLVATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISL 415
A L++ + IA+ G V +K+ + ++LA I +AI +
Sbjct: 214 PALVLMITSLIASPIGASVGQKV-----NTKFLQWVLAQLIGATAIKI 256
Score = 32.0 bits (71), Expect = 3.3
Identities = 29/112 (25%), Positives = 50/112 (43%), Gaps = 12/112 (10%)
Query: 307 GIIAGMVSGLLGLGGGFILGPLFLEL----GIPPQVASATSTFA--MVFSSSMSVVQYYH 360
G I +SG++G+GG I P+ L + G+ A S VF +++ V Y
Sbjct: 13 GFIGAFISGMIGIGGAVINYPMLLYIPSLVGVMSLTAHEVSGIGAIQVFFATLGGVWAYR 72
Query: 361 ----LDRFPIPYASYLVLVATIAALTGQHVV--RKIIAIFGRASIIVFILAF 406
+++ I Y +L+ ++ H + + I I+G +II IL F
Sbjct: 73 KSGLINKTLIIYMGSSILLGSVLGSYFSHYISEKGINFIYGILAIIAVILMF 124
>YCB9_PSEDE (P29942) Hypothetical 27.4 kDa protein in cobO 3'region
(ORF9)
Length = 261
Score = 40.4 bits (93), Expect = 0.009
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 297 FHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVV 356
FH + IAG + + G GGG I P L GIPP T+ +F S + +
Sbjct: 6 FHLLAFLFVAAFIAGFIDSIAG-GGGMITIPAMLIAGIPPLQTLGTNKLQGLFGSGSATL 64
Query: 357 QYYHLDRFPIPYASYLVLVATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISLG 416
Y + + L++ A+ G ++A ++ IL F + A+ G
Sbjct: 65 SYARRGHVNLKEQLPMALMSAAGAVLG-----ALLATIVPGDVLKAILPFLLIAIALYFG 119
>Y4HK_RHISN (P55478) Hypothetical 25.4 kDa protein y4hK
Length = 247
Score = 37.4 bits (85), Expect = 0.079
Identities = 33/114 (28%), Positives = 51/114 (43%), Gaps = 13/114 (11%)
Query: 307 GIIAGMVSGLLGLGGGFILGP--LFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRF 364
G + G VSG G GGG L P LF G Q A+ T+ + ++ S++ + +
Sbjct: 140 GAVIGFVSGTTGSGGGVFLAPVILFKNWGTAHQTAATTAVYNLMNSTAALIGACASWNAL 199
Query: 365 PIPYASYLVLVA---TIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISL 415
P +L+ VA +I AL G + AS + IL+ + VS + L
Sbjct: 200 PNFLPWWLIAVAAGGSIGALIGSRYL--------SASWLRVILSVLLMVSGLKL 245
Score = 33.1 bits (74), Expect = 1.5
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 21/119 (17%)
Query: 49 IVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCMITGAAGSTVYYN 108
++ G+++GF GS GGG+F+ + L + T A +T YN
Sbjct: 137 LITGAVIGFVSGTTGS-----GGGVFLAPVILFKNWGTAHQT----------AATTAVYN 181
Query: 109 LRLRHPTLDMPLIDYDLALLFQPMLMLGISIG------VAFNVMFADWMVTILLIILFI 161
L L ++ F P ++ ++ G + + A W+ IL ++L +
Sbjct: 182 LMNSTAALIGACASWNALPNFLPWWLIAVAAGGSIGALIGSRYLSASWLRVILSVLLMV 240
>MNTH_THETN (Q8R7S2) Probable manganese transport protein mntH
Length = 421
Score = 35.8 bits (81), Expect = 0.23
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 332 LGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLVATIAALTGQHVVRKII 391
L I ++A+ + A +M + +H+ P+ YA++L V T A + + +K++
Sbjct: 102 LWITAELAAMATDLAEFLGGTMGLYLLFHI---PMTYAAFLTGVVTFAIVYMEKYGQKVV 158
Query: 392 --AIFGRASIIVFILAFTIFVSAISLGGVGIGNMVEKMENEEYM 433
IFG ++I AF +F++ V + + N++ M
Sbjct: 159 EGIIFGLVAVISLAYAFELFIARPDWSKVLYHTFIPSIPNKDAM 202
>Y902_HAEIN (P44070) Hypothetical protein HI0902
Length = 264
Score = 34.7 bits (78), Expect = 0.51
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 297 FHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLEL----GIPPQVASAT---STFAMVF 349
F I L G +AG ++GL G+GGG ++ P + L +P + +T ++FA +
Sbjct: 2 FTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIV 61
Query: 350 SSSMSVVQYYH 360
+ + Q +H
Sbjct: 62 ITGIGSAQRHH 72
Score = 33.5 bits (75), Expect = 1.1
Identities = 23/78 (29%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
Query: 269 ISVTLFEAICLCKGTRVIASRGKE-ITWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGP 327
IS +F + + T+++ S K+ +T K GI+ GM S G+GGG + P
Sbjct: 107 ISAKIFACLVVYLATKMVLSIKKDQVTTKSLTPLSSVIGGILIGMASSAAGIGGGGFIVP 166
Query: 328 LFLELGIPPQVASATSTF 345
GI + A +S F
Sbjct: 167 FLTARGINIKQAIGSSAF 184
>NU5M_CANPA (P48919) NADH-ubiquinone oxidoreductase chain 5 (EC
1.6.5.3) (NADH dehydrogenase subunit 5)
Length = 555
Score = 33.1 bits (74), Expect = 1.5
Identities = 18/82 (21%), Positives = 37/82 (44%)
Query: 238 VAFLIVQILKTYSKTCSIEYWLLNSLQVPIAISVTLFEAICLCKGTRVIASRGKEITWKF 297
++ L++ S + WLL +++ P +S L A +C G V+ + +
Sbjct: 168 LSLLLLLAATAKSAQLGLHAWLLQAMEGPTPVSALLHAATMVCAGVYVLVRSYFILEYAP 227
Query: 298 HKICLYCFCGIIAGMVSGLLGL 319
+ C+ G + +VSGL+ +
Sbjct: 228 SLLIGICWLGGVTTLVSGLIAI 249
>LEP4_AERSA (O68964) Type 4 prepilin-like proteins leader peptide
processing enzyme [Includes: Leader peptidase (EC
3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC
2.1.1.-)]
Length = 291
Score = 32.3 bits (72), Expect = 2.5
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 22/168 (13%)
Query: 227 WKELSVLMYVWVAFLIVQILKTYSKTCSIEYWLL-NSLQVPIAISVTLFEAI--CLCKGT 283
W L+ L+ WV + I ++ LL + L +P+ LF + + G
Sbjct: 133 WGTLAALLLTWVLVALTFI--------DLDKMLLPDQLTLPLLWGGLLFNLLGGYVPLGD 184
Query: 284 RVI-ASRGKEITWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLELGIP--PQVAS 340
VI A G + W LY ++ G +G G +L L LG P V
Sbjct: 185 AVIGAMAGYLVLWS-----LYWAFKLLTGKEG--MGYGDFKLLAALGAWLGWQALPIVLL 237
Query: 341 ATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLVATIAALTGQHVVR 388
+S +F + +++ +H + PIP+ YL + IA L G + R
Sbjct: 238 LSSLVGAIFGIGLILLRNHHQSK-PIPFGPYLAIAGWIALLWGDSITR 284
>ABC9_RAT (Q9QYJ4) ATP-binding cassette, sub-family B, member 9
precursor (ATP-binding cassette transporter 9) (ABC
transporter 9 protein) (TAP-like protein) (TAPL)
Length = 762
Score = 32.3 bits (72), Expect = 2.5
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 111 LRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNV------MFADWMVTILLIILFIG 162
+RH + ++D A L++ L+LG +IGVA N + A W+V I L+ LF+G
Sbjct: 38 IRHFNIFDSVLDLWAACLYRSCLLLGATIGVAKNSALGPRRLRASWLV-ITLVCLFVG 94
>ABC9_MOUSE (Q9JJ59) ATP-binding cassette, sub-family B, member 9
precursor (ATP-binding cassette transporter 9) (ABC
transporter 9 protein) (TAP-like protein) (TAPL)
(mABCB9)
Length = 762
Score = 32.3 bits (72), Expect = 2.5
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 111 LRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNV------MFADWMVTILLIILFIG 162
+RH + ++D A L++ L+LG +IGVA N + A W+V I L+ LF+G
Sbjct: 38 IRHFNIFDSVLDLWAACLYRSCLLLGATIGVAKNSALGPRRLRASWLV-ITLVCLFVG 94
>ABC9_HUMAN (Q9NP78) ATP-binding cassette, sub-family B, member 9
precursor (ATP-binding cassette transporter 9) (ABC
transporter 9 protein) (TAP-like protein) (TAPL)
(hABCB9)
Length = 766
Score = 32.3 bits (72), Expect = 2.5
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 111 LRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNV------MFADWMVTILLIILFIG 162
+RH + ++D A L++ L+LG +IGVA N + A W+V I L+ LF+G
Sbjct: 38 IRHFNIFDSVLDLWAACLYRSCLLLGATIGVAKNSALGPRRLRASWLV-ITLVCLFVG 94
>YFBS_ECOLI (P77741) Hypothetical protein yfbS
Length = 610
Score = 32.0 bits (71), Expect = 3.3
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 307 GIIAGMVSGLLGLGGGF----ILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLD 362
G +A V GL+ +GGG+ +LG LF+ + S T+T ++ +++ + +
Sbjct: 487 GGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVS 546
Query: 363 RFPIPYASYLVLVATIAALTG-QHVVRKIIAIFGRASIIVFI---LAFTIFVSAI 413
P P+A + + A+ A +T V ++ G S F+ + FTI V A+
Sbjct: 547 --PYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAV 599
>SECY_BACHD (P38375) Preprotein translocase secY subunit
Length = 430
Score = 32.0 bits (71), Expect = 3.3
Identities = 43/156 (27%), Positives = 71/156 (44%), Gaps = 15/156 (9%)
Query: 268 AISVTLFEAICLCKGTRVIASRGKEITWK--FHKICLYCFCGIIAGMVSGLLGLGGGFIL 325
++SV LF A+ L GT + G++IT K + I + F GI AG+ +GL + I
Sbjct: 144 SVSVYLFIALVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIAAGIPNGLNLIYSTRIQ 203
Query: 326 G---PLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLVATIAALT 382
LFL + + +A A + + VQ L + P+ YA LV +
Sbjct: 204 DAGEQLFLNIVVILLLALA----ILAIIVGVIFVQ-QALRKIPVQYAKRLVGRNPVGG-Q 257
Query: 383 GQHVVRKIIAIFGRASIIVFILAFTIFVSAISLGGV 418
H+ K+ A A +I I A ++F+ ++ G+
Sbjct: 258 STHLPLKVNA----AGVIPVIFALSLFIFPPTVAGL 289
>DHAL_CLAHE (P40108) Aldehyde dehydrogenase (EC 1.2.1.3) (ALDDH)
(Allergen Cla h 3) (Cla h III)
Length = 496
Score = 32.0 bits (71), Expect = 3.3
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 321 GGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLVATIAA 380
GG + L E G PP V + S F V +++S H+D + + V+ TI
Sbjct: 195 GGLVAASLVKEAGFPPGVINVISGFGKVAGAALS----SHMDVDKVAFTGSTVVGRTILK 250
Query: 381 LTGQHVVRKI-IAIFGRASIIVF 402
++K+ + + G++ IVF
Sbjct: 251 AAASSNLKKVTLELGGKSPNIVF 273
>YCF1_PINTH (P41647) Hypothetical 205.3 kDa protein ycf1 (ORF 1756)
Length = 1756
Score = 31.6 bits (70), Expect = 4.3
Identities = 27/106 (25%), Positives = 52/106 (48%), Gaps = 5/106 (4%)
Query: 227 WKELSVLMYVWVAFLIVQILKTYSKTCSIEY-WLLNSLQVPIAISVTLFEAICLCKGTRV 285
WK ++ + V V ++ + + K S E L+NS+ P A+S+ + I +
Sbjct: 84 WKPYAITLLV-VPYMFFRFFQIMDKPSSSESPHLMNSINNPKALSLFMDGLILQLLNPIL 142
Query: 286 IASRGKEITWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLE 331
+A+ + + + L+ + I+ M+SGL G GG IL +F++
Sbjct: 143 LAN---PVLTRLVNLFLFRYSPNISFMISGLCGWLGGHILLTIFIK 185
>YD82_METTH (O27435) Hypothetical protein MTH1382
Length = 302
Score = 31.2 bits (69), Expect = 5.7
Identities = 29/112 (25%), Positives = 46/112 (40%), Gaps = 27/112 (24%)
Query: 47 WRIVVGSIVGFFGAALGSVGGVGG--GGIFIPMLTLIIGFDPKSSTALSKCMITGAAGST 104
W ++G I +G G G + G G +P++ + +G
Sbjct: 169 WAFLLGVIFNLWGLPTGIAGTILGYLSGAAVPLIMISLGLT------------------- 209
Query: 105 VYYNLR-LRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTIL 155
N R LRH D L+ L LL P++ GIS +AF + ++ VT+L
Sbjct: 210 --LNFRFLRHSVADATLVS-GLRLLISPLMAAGISYVLAFRGL--NFSVTVL 256
>PEPF_BACSU (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-)
Length = 609
Score = 31.2 bits (69), Expect = 5.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 340 SATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLVATIAALTGQ 384
+ + F +V SV YY P PY +Y + VA +A+ T +
Sbjct: 386 NVNNLFTLVHEFGHSVHSYYTRKHQPYPYGNYSIFVAEVASTTNE 430
>YFCA_HAEIN (P46490) Hypothetical protein HI0198
Length = 255
Score = 30.8 bits (68), Expect = 7.4
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 305 FC-GIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDR 363
FC G +A + + G GGG I P L G+PP +A T+ + + + + +
Sbjct: 12 FCVGFVASFIDAIAG-GGGLITIPALLMTGMPPAMALGTNKLQAMGGALSASLYFLRKRA 70
Query: 364 FPIPYASYLVLVATIAALTGQHVVRKI-IAIFGRASIIVFILAFTIFVSAISLG 416
+ ++++ + + G +++ I +AIF + + + F+ LG
Sbjct: 71 VNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGLYFLFTPKLG 124
>RFBP_SALTY (P26406) Undecaprenyl-phosphate galactose
phosphotransferase (EC 2.7.8.6)
(Galactosyl-P-P-undecaprenol synthetase)
Length = 476
Score = 30.8 bits (68), Expect = 7.4
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 106 YYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVT----------IL 155
++ +RLRH T P Y+L +F+ +++ I +A + F W + L
Sbjct: 69 WFWIRLRHYTYRKPFW-YELKEIFRTIVIFAI-FDLAL-IAFTKWQFSRYVWVFCWTFAL 125
Query: 156 LIILFIGTSTKALVKGIDTWKKETIM 181
+++ F TK L+ + WKK+TI+
Sbjct: 126 ILVPFFRALTKHLLNKLGIWKKKTII 151
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.326 0.142 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,870,540
Number of Sequences: 164201
Number of extensions: 2120824
Number of successful extensions: 8801
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 8767
Number of HSP's gapped (non-prelim): 47
length of query: 447
length of database: 59,974,054
effective HSP length: 113
effective length of query: 334
effective length of database: 41,419,341
effective search space: 13834059894
effective search space used: 13834059894
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147964.5